View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16676_high_12 (Length: 483)
Name: NF16676_high_12
Description: NF16676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16676_high_12 |
 |  |
|
| [»] scaffold0468 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 439; Significance: 0; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 20 - 470
Target Start/End: Original strand, 32412503 - 32412953
Alignment:
| Q |
20 |
taagcaacaacatttctagagagttcggtaaagtattttgttggacttggttctctaaaagcatgccaactgaaaagttcaagggactcatcttcatcca |
119 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32412503 |
taagcaacaacatttctagagagttcagtaaagtattttgttggacttggttctctaaaagcatgccaactgaaaagttcaagggactcatcttcatcca |
32412602 |
T |
 |
| Q |
120 |
tctccttcattgtacaaacatgtgcaactttaagcaatttaagtaggtgtacatctctggttgtaacaattaatacacttcccgtaccaaaccatttacg |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32412603 |
tctccttcattgtacaaacatgtgcaactttaagcaatttaagtaggtgtacatctctggttgtaacaattaatacacttcccgtaccaaaccatttacg |
32412702 |
T |
 |
| Q |
220 |
atttccacatagggcttttatttgctcaaacttactcacatcatccagtataaccaggactgttttccctcgaagtcttttctcgatcatagtagtcccc |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32412703 |
atttccacatagggcttttatttgctcaaacttactcacatcatccagtataaccaggactgttttccctcgaagtcttttctcgatcatagtagtcccc |
32412802 |
T |
 |
| Q |
320 |
gatgtaatactatgtatcttcttcacctttatctttaagacatctgaaagtagttgttcttgcaaacgaataatccctgtattatccttgtcacagattt |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
32412803 |
gatgtaatactatgtatcttcttcacctttatctttaagacatctgaaagtagttgttcttgcaaacgaataatccctgtattatccttttcacagattt |
32412902 |
T |
 |
| Q |
420 |
ctctaattttttcaatgaagcttctatctgcaaatttgcgattgatttgat |
470 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32412903 |
ctctaatgttttcaatgaagcttctatctgcaaatttgcgattgatttgat |
32412953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 73 - 239
Target Start/End: Original strand, 6907443 - 6907609
Alignment:
| Q |
73 |
tctaaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaatttaagtaggtgtaca |
172 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| ||||||||| || ||| |||||| ||| |||||| ||| | |||| | |||| || |
|
|
| T |
6907443 |
tctaaaagcatgccaactgaaaagctcaagggactcattttcatccatttctttcgctgtacagacacagtcaacttcaagtgacctaagcacgtgtgca |
6907542 |
T |
 |
| Q |
173 |
tctctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggctttta |
239 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||| || |||||| |||||||||||| ||||||| |
|
|
| T |
6907543 |
tctctggttgtaacaattagtacacttcccaaacctaaacatttataatttccacatagtgctttta |
6907609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 239
Target Start/End: Original strand, 3288043 - 3288214
Alignment:
| Q |
68 |
ggttctctaaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaatttaagtaggt |
167 |
Q |
| |
|
|||| ||||||| ||||||| |||||||| ||||||||||||| ||||||||| ||||||||| |||| |||| |||| |||| || | |||||||| |
|
|
| T |
3288043 |
ggttgtctaaaaacatgccagctgaaaagctcaagggactcattttcatccatttccttcattttacacacatagtcaaccttaaataaatcaagtaggt |
3288142 |
T |
 |
| Q |
168 |
gtacatctctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggctttta |
239 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||| | |||||| ||| | ||||| ||||||||||||||| |
|
|
| T |
3288143 |
gtacatctctagttgtaataattaatacacttcctggaccaaagaattcaggatttgcacatagggctttta |
3288214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 62 - 217
Target Start/End: Original strand, 3326565 - 3326720
Alignment:
| Q |
62 |
ggacttggttctctaaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaatttaa |
161 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||||||||||| | ||| ||||| |||||||||||||| |||| |||| |||| || |||| |
|
|
| T |
3326565 |
ggactaggttgtctaaaagcatgccaactgaaaagctcaagggactccttttcgtccatttccttcattgtacatacatagtcaaccttaactaaattaa |
3326664 |
T |
 |
| Q |
162 |
gtaggtgtacatctctggttgtaacaattaatacacttcccgtaccaaaccattta |
217 |
Q |
| |
|
| | | |||||||||||||||||| |||||||||||||||| ||||||| ||||| |
|
|
| T |
3326665 |
gcacgcgtacatctctggttgtaattattaatacacttcccggaccaaacaattta |
3326720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 3268808 - 3268992
Alignment:
| Q |
62 |
ggacttggttctctaaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaatttaa |
161 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||||||| | ||||||||| ||||| || || | | | | |||||||||| || |||| |
|
|
| T |
3268808 |
ggacttggttctctaaaagcatgccaacagaaaagctcaagggacttgttttcatccatttcctttatgttatagatacggtcaactttaagtaacttaa |
3268907 |
T |
 |
| Q |
162 |
gtaggtgtacatctctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggcttttatttgctc |
246 |
Q |
| |
|
||| | ||||||| || | ||||||||| ||||||||||||| |||||| ||||||| |||| ||||||||||| || |||||| |
|
|
| T |
3268908 |
gtatgcgtacatccctagatgtaacaatcaatacacttcccgcaccaaaacatttacaatttatacatagggcttctacttgctc |
3268992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 3408998 - 3409110
Alignment:
| Q |
158 |
ttaagtaggtgtacatctctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggcttttatttgctcaaacttactca |
257 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||||| | |||||| ||||| ||||||| ||||||||||||||||||| ||| | | ||| |
|
|
| T |
3408998 |
ttaagtatgtgtacatctctggttgtaacaattaacacacttccagcaccaaaaaatttatgatttccgcatagggcttttatttgctgaaaatcagtca |
3409097 |
T |
 |
| Q |
258 |
catcatccagtat |
270 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
3409098 |
catcatcaagtat |
3409110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 446
Target Start/End: Original strand, 7166249 - 7166630
Alignment:
| Q |
62 |
ggacttggttctctaaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaatttaa |
161 |
Q |
| |
|
||||| |||| || ||||||||||||||||||||| ||||||| || | ||| ||||| |||||||||||||| |||| |||| |||| || || | |
|
|
| T |
7166249 |
ggactaggttgtcgaaaagcatgccaactgaaaagctcaagggggtctttttcttccatttccttcattgtacagacatagtcaaccttaactaaattga |
7166348 |
T |
 |
| Q |
162 |
gtaggtgtacatctctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggcttttatttgctcaaacttactcacatc |
261 |
Q |
| |
|
| ||| | ||||||| ||||||||||| || |||||||||| |||||| || || |||||||||||| ||||||| || || | | ||||||| |
|
|
| T |
7166349 |
gcaggcgagcatctctagttgtaacaataaagacacttcccggaccaaataatctaggatttccacataacgcttttaactgttccactgtggtcacatc |
7166448 |
T |
 |
| Q |
262 |
atccagtataaccaggactgttttccctcgaagtcttttctcgatcatagtagtccccgatgtaatactatgtatcttcttcacctttatctttaagaca |
361 |
Q |
| |
|
||| || | ||| || | |||||||| ||| ||||||||| ||| |||| |||||| ||| | ||||||||||| || |||| | || | || | |
|
|
| T |
7166449 |
atcaagaacaactagtaactttttcccttgaaatcttttctcaatcttagttgtccccaatgcagggctatgtatcttatt---ctttgtgttcaggata |
7166545 |
T |
 |
| Q |
362 |
tctgaaagtagttgttcttgcaaacgaataatccctgtattatccttgtcacagatttctctaattttttcaatgaagcttctat |
446 |
Q |
| |
|
|||||||| ||||||| ||| ||| ||||| ||||| |||| ||||| ||||| | |||||||| ||||||||||| ||||||| |
|
|
| T |
7166546 |
tctgaaagaagttgttgttgtaaatgaatagtccctctattttccttttcacatacttctctaacgttttcaatgaaacttctat |
7166630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 73 - 246
Target Start/End: Complemental strand, 13807381 - 13807208
Alignment:
| Q |
73 |
tctaaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaatttaagtaggtgtaca |
172 |
Q |
| |
|
|||||||||||| || ||||||| || |||||||||| ||| ||||| ||| |||| || | ||||| |||||| ||| || ||||||| | ||||| |
|
|
| T |
13807381 |
tctaaaagcatgtaaattgaaaagctcgagggactcatattcgtccatttccgtcatgctatagacatggtcaacttcaagtaacttaagtatgcgtaca |
13807282 |
T |
 |
| Q |
173 |
tctctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggcttttatttgctc |
246 |
Q |
| |
|
|| |||| ||||||||| |||||||| || |||||||| |||||| | |||||||||||||| |||| |||||| |
|
|
| T |
13807281 |
tccctggatgtaacaatcaatacactcccggtaccaaaacatttatgttttccacatagggcatttacttgctc |
13807208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 3264067 - 3264249
Alignment:
| Q |
19 |
ataagcaacaacatttctagagagttcggtaaagtattttgttggacttggttctctaaaagcatgccaactgaaaagttcaagggactcatcttcatcc |
118 |
Q |
| |
|
||||||||| || ||||| |||||||| | |||| |||| ||||| | ||| ||| |||||||||||||||||||| ||||||||||| ||| | | |
|
|
| T |
3264067 |
ataagcaactacgtttcttgagagttcactgaagtcttttattggaataggtcgtctgaaagcatgccaactgaaaagctcaagggactccctttcgttc |
3264166 |
T |
 |
| Q |
119 |
atctccttcattgtacaaacatgtgcaactttaagcaatttaagtaggtgtacatctctggttgtaacaattaatacacttcc |
201 |
Q |
| |
|
|| |||||||||||| | ||| | |||||| ||| || ||||||| | | ||||| ||||||||||||||||| |||||||| |
|
|
| T |
3264167 |
atttccttcattgtaaagacacggtcaacttcaagtaacttaagtatgcgcacatccctggttgtaacaattaaaacacttcc |
3264249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 312
Target Start/End: Original strand, 3400216 - 3400452
Alignment:
| Q |
76 |
aaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaatttaagtaggtgtacatct |
175 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||| | | ||| || | |||| |||| || ||| || ||||| |
|
|
| T |
3400216 |
aaaagcatgccaacagaaaagttcaagggactggtcttcgtccatttctgtcattgtgaagatatggtcaccactaagtgatttgagaaggcgtccatct |
3400315 |
T |
 |
| Q |
176 |
ctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggcttttatttgctcaaacttactcacatcatccagtataacca |
275 |
Q |
| |
|
|| ||||||| ||| ||||||||||||| ||| ||| | ||| ||| | |||| ||| ||||| ||||||| | | |||||||||| ||||| || | |
|
|
| T |
3400316 |
ctagttgtaataatcaatacacttcccgaaccgaacaacttaggatctgcacacaggttttttaattgctcagatgtggtcacatcatcaagtatgacaa |
3400415 |
T |
 |
| Q |
276 |
ggactgttttccctcgaagtcttttctcgatcatagt |
312 |
Q |
| |
|
||||||| ||||||||||||||||| ||| |||| |
|
|
| T |
3400416 |
aaactgtttgtcctcgaagtcttttctcaatcttagt |
3400452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 461
Target Start/End: Original strand, 3269060 - 3269165
Alignment:
| Q |
356 |
aagacatctgaaagtagttgttcttgcaaacgaataatccctgtattatccttgtcacagatttctctaattttttcaatgaagcttctatctgcaaatt |
455 |
Q |
| |
|
||||||| ||||| ||||||||||| ||| || |||||||| |||| ||||| ||| | | ||||||||| ||||||||||| || |||| |||||| |
|
|
| T |
3269060 |
aagacattagaaagaagttgttcttgtaaatgagtaatccctctattttccttttcataaacttctctaatattttcaatgaaactgtgatctacaaatt |
3269159 |
T |
 |
| Q |
456 |
tgcgat |
461 |
Q |
| |
|
|||||| |
|
|
| T |
3269160 |
tgcgat |
3269165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 468
Target Start/End: Original strand, 3264331 - 3264514
Alignment:
| Q |
282 |
ttttccctcgaagtcttttctcgatcatagtagtccccgatgtaatactatgtatcttcttcacctttatctttaagacatctgaaagtagttgttcttg |
381 |
Q |
| |
|
|||||||| |||||||| |||| ||| ||| |||||||||| ||| |||||||| ||| ||||| || |||| ||||||||| ||||| | ||| |
|
|
| T |
3264331 |
ttttcccttgaagtcttctctctatcgtagaggtccccgatgcaatgctatgtataatct---cctttgaattcaagatatctgaaagaagttgctgttg |
3264427 |
T |
 |
| Q |
382 |
caaacgaataatccctgtattatccttgtcacagatttctctaattttttcaatgaagcttctatctgcaaatttgcgattgatttg |
468 |
Q |
| |
|
||| |||||||||| ||| ||| || ||| | | ||||||||| ||||| ||||| ||| |||| |||||||||||| |||||| |
|
|
| T |
3264428 |
taaatgaataatcccagtactatatttttcataaacttctctaatattttcgatgaaacttttatcctcaaatttgcgatggatttg |
3264514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 13786135 - 13786062
Alignment:
| Q |
60 |
ttggacttggttctctaaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgta |
133 |
Q |
| |
|
||||||| |||| ||||||||||||||||| ||||| ||||| |||| | |||| |||| |||||||||||| |
|
|
| T |
13786135 |
ttggactaggttgtctaaaagcatgccaacaaaaaagctcaagagacttaccttcgaccatttccttcattgta |
13786062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 14768520 - 14768677
Alignment:
| Q |
82 |
atgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaatttaagtaggtgtacatctctggtt |
181 |
Q |
| |
|
||||||||||||||| |||||||| || |||| | ||| |||| || |||| | ||| |||||| ||| || ||||| |||||||||||||||||| |
|
|
| T |
14768520 |
atgccaactgaaaagctcaagggagtcgtctttgttcatttcctcggttttacagagatggtcaacttcaagtaaattaagaaggtgtacatctctggtt |
14768619 |
T |
 |
| Q |
182 |
gtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggctttta |
239 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||| |||||| ||||| |||||||||| |
|
|
| T |
14768620 |
gtaacaattattacacttccagtaccaaaccatgcacgattgccacacagggctttta |
14768677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 239
Target Start/End: Complemental strand, 30416430 - 30416251
Alignment:
| Q |
60 |
ttggacttggttctctaaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaattt |
159 |
Q |
| |
|
||||||||| | |||||| |||||||| |||||||| || |||||||| | || ||||||||| || | || | | ||||| |||||| ||| | || |
|
|
| T |
30416430 |
ttggacttgcctgtctaaacgcatgccagctgaaaagctcgagggactccttttgatccatctcgttaactggatagacatggtcaacttgaagtgactt |
30416331 |
T |
 |
| Q |
160 |
aagtaggtgtacatctctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggctttta |
239 |
Q |
| |
|
||||| |||| |||| ||| |||||||||||||||||||||| | ||||||||| |||||| || || |||||||||||| |
|
|
| T |
30416330 |
aagtatgtgtgcatccctgcttgtaacaattaatacacttcctgcaccaaaccacttacgactttcatatagggctttta |
30416251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0468 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0468
Description:
Target: scaffold0468; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 239
Target Start/End: Original strand, 7851 - 8015
Alignment:
| Q |
75 |
taaaagcatgccaactgaaaagttcaagggactcatcttcatccatctccttcattgtacaaacatgtgcaactttaagcaatttaagtaggtgtacatc |
174 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| ||||| || || |||||| ||| | | ||| ||| || ||||||| ||| |||| |
|
|
| T |
7851 |
taaaagcatgccaactgaaaagctcaagggactcatcttcgtccatttcttttgctgtacagacagggcgagcttcaagtaacttaagtatgtgcgcatc |
7950 |
T |
 |
| Q |
175 |
tctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggctttta |
239 |
Q |
| |
|
|||||||||| ||||| ||||| || ||| || |||||| |||||||||||||||||||| |
|
|
| T |
7951 |
cctggttgtaataattatcacactgccaaaacctaaacatttataatttccacatagggctttta |
8015 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 8373419 - 8373516
Alignment:
| Q |
172 |
atctctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggcttttatttgctcaaacttactcacatcatccagta |
269 |
Q |
| |
|
|||||| ||||||| ||| ||||||||||| | ||||||| | ||| ||||||||| || ||||||| ||||||| |||| |||||||||| |||| |
|
|
| T |
8373419 |
atctctagttgtaataatcaatacacttcctgaaccaaacaacttaggatttccacccagagcttttaattgctcagacttggtcacatcatcaagta |
8373516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 8373326 - 8373358
Alignment:
| Q |
76 |
aaaagcatgccaactgaaaagttcaagggactc |
108 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |
|
|
| T |
8373326 |
aaaagcatgccagctgaaaagttcaagggactc |
8373358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 31060516 - 31060621
Alignment:
| Q |
164 |
aggtgtacatctctggttgtaacaattaatacacttcccgtaccaaaccatttacgatttccacatagggcttttatttgctcaaacttactcacatcat |
263 |
Q |
| |
|
|||||| ||||||||||||||| ||| |||||| ||| || |||||| | |||| |||| |||| |||||||||| || | ||||||| ||||||||| |
|
|
| T |
31060516 |
aggtgttcatctctggttgtaaaaatcaatacagttcgcgaaccaaagaacttacaatttacacacagggcttttaatttcccaaacttggtcacatcat |
31060615 |
T |
 |
| Q |
264 |
ccagta |
269 |
Q |
| |
|
| |||| |
|
|
| T |
31060616 |
caagta |
31060621 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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