View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16676_low_31 (Length: 288)
Name: NF16676_low_31
Description: NF16676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16676_low_31 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 10 - 273
Target Start/End: Original strand, 34303637 - 34303900
Alignment:
| Q |
10 |
attattctcatttgttgacatttttctttgcttgattgaattcaacatgaaggatgaaccaaaattgaaagagacattgacatttgcaaatgcttgtgga |
109 |
Q |
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| T |
34303637 |
attattctaattttttgacatttttctttgcttgattgaattcaacatgaaggatgaaccaaaattgagagagacattgacatttgcaaatgcctgtgga |
34303736 |
T |
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| Q |
110 |
gcaatgtgtacaacacagaagggagccattcctgcacttccaactgctgaagaggctcagaaatttatttccagctctaaagccaaataagaacttgcaa |
209 |
Q |
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| T |
34303737 |
gcaatgtgtacaacacagaagggagccattcctgcacttccaactgctgaagaggctcagaaatttatttccagctctaaagccaaataagaacttgcaa |
34303836 |
T |
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| Q |
210 |
atgctttgaaatttgatgatggtccagaggactagctatattaattttcatttgagagattttt |
273 |
Q |
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| T |
34303837 |
atgctttgaaatttgatgatggtccagaggactagctatattcattttcatttgagagtttttt |
34303900 |
T |
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