View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16677_low_8 (Length: 249)

Name: NF16677_low_8
Description: NF16677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16677_low_8
NF16677_low_8
[»] chr2 (32 HSPs)
chr2 (16-238)||(44955146-44955369)
chr2 (18-112)||(44721682-44721776)
chr2 (16-73)||(22538560-22538617)
chr2 (13-95)||(9796915-9796997)
chr2 (16-94)||(23683717-23683795)
chr2 (16-82)||(36665451-36665517)
chr2 (16-73)||(32891620-32891677)
chr2 (16-97)||(36426849-36426930)
chr2 (18-73)||(2114452-2114507)
chr2 (16-63)||(24034080-24034127)
chr2 (16-54)||(16028144-16028182)
chr2 (17-95)||(32988372-32988450)
chr2 (16-73)||(22297469-22297526)
chr2 (13-73)||(9802910-9802970)
chr2 (16-112)||(11133097-11133193)
chr2 (18-82)||(17239924-17239988)
chr2 (17-73)||(25731956-25732012)
chr2 (16-55)||(10262760-10262799)
chr2 (22-73)||(41699129-41699180)
chr2 (16-102)||(9547115-9547201)
chr2 (16-62)||(27495559-27495605)
chr2 (16-62)||(39726462-39726508)
chr2 (16-73)||(580800-580857)
chr2 (16-97)||(15392204-15392285)
chr2 (16-73)||(17154670-17154727)
chr2 (15-64)||(19905681-19905730)
chr2 (16-73)||(29034997-29035054)
chr2 (16-53)||(32943360-32943397)
chr2 (16-73)||(36520797-36520854)
chr2 (16-80)||(2304311-2304375)
chr2 (16-64)||(31956887-31956935)
chr2 (21-73)||(40471179-40471231)
[»] chr3 (38 HSPs)
chr3 (15-73)||(50724387-50724445)
chr3 (15-73)||(50788403-50788461)
chr3 (16-97)||(13539957-13540038)
chr3 (16-97)||(36331719-36331800)
chr3 (16-97)||(49146105-49146186)
chr3 (18-73)||(28226204-28226259)
chr3 (16-82)||(55195869-55195935)
chr3 (16-97)||(13616067-13616148)
chr3 (16-73)||(14868706-14868763)
chr3 (20-97)||(31698558-31698635)
chr3 (20-73)||(32508811-32508864)
chr3 (16-73)||(33206778-33206835)
chr3 (16-97)||(36727456-36727536)
chr3 (16-57)||(43566829-43566870)
chr3 (16-73)||(47191394-47191451)
chr3 (17-73)||(38555045-38555100)
chr3 (17-73)||(43598821-43598876)
chr3 (16-67)||(19540362-19540413)
chr3 (21-112)||(44953139-44953230)
chr3 (21-55)||(34407125-34407159)
chr3 (20-82)||(37059472-37059534)
chr3 (16-73)||(9625004-9625061)
chr3 (16-73)||(14417889-14417946)
chr3 (16-73)||(27183698-27183755)
chr3 (16-53)||(35483290-35483327)
chr3 (16-73)||(36476380-36476437)
chr3 (16-57)||(40786301-40786342)
chr3 (16-73)||(49639049-49639106)
chr3 (16-73)||(53467970-53468026)
chr3 (16-64)||(3784091-3784139)
chr3 (16-64)||(24751286-24751334)
chr3 (21-73)||(26583127-26583179)
chr3 (21-73)||(28951892-28951944)
chr3 (18-54)||(34136786-34136822)
chr3 (18-54)||(37279650-37279686)
chr3 (16-64)||(41121892-41121940)
chr3 (16-112)||(43774206-43774302)
chr3 (17-73)||(48173308-48173364)
[»] chr8 (36 HSPs)
chr8 (20-97)||(6978845-6978922)
chr8 (15-73)||(6064397-6064455)
chr8 (14-60)||(6970674-6970720)
chr8 (24-75)||(12560060-12560111)
chr8 (16-55)||(25119229-25119268)
chr8 (16-75)||(30942614-30942673)
chr8 (19-73)||(13702369-13702423)
chr8 (16-73)||(1588788-1588845)
chr8 (16-73)||(7649550-7649606)
chr8 (16-73)||(24074527-24074584)
chr8 (16-73)||(26703907-26703964)
chr8 (17-73)||(5323944-5324000)
chr8 (18-62)||(25139915-25139959)
chr8 (16-64)||(43847723-43847771)
chr8 (16-63)||(2376539-2376586)
chr8 (16-55)||(4293904-4293943)
chr8 (16-51)||(7603752-7603787)
chr8 (16-75)||(42688077-42688136)
chr8 (30-80)||(2282547-2282597)
chr8 (16-97)||(23857316-23857398)
chr8 (16-54)||(35301199-35301237)
chr8 (16-73)||(1032978-1033034)
chr8 (16-73)||(2696554-2696611)
chr8 (16-73)||(2800040-2800097)
chr8 (16-73)||(8034551-8034608)
chr8 (16-73)||(10199759-10199816)
chr8 (16-73)||(10292373-10292430)
chr8 (20-73)||(10970291-10970344)
chr8 (27-64)||(12676271-12676308)
chr8 (16-73)||(15042382-15042439)
chr8 (16-73)||(22426422-22426479)
chr8 (24-73)||(27868735-27868784)
chr8 (16-73)||(33570446-33570503)
chr8 (27-63)||(10573136-10573172)
chr8 (21-73)||(25470863-25470915)
chr8 (16-64)||(35556412-35556460)
[»] chr5 (24 HSPs)
chr5 (16-97)||(3102120-3102201)
chr5 (21-75)||(7147034-7147088)
chr5 (20-82)||(19982256-19982318)
chr5 (16-73)||(18872542-18872599)
chr5 (16-64)||(27440324-27440372)
chr5 (16-58)||(14487582-14487624)
chr5 (20-82)||(42801449-42801511)
chr5 (16-73)||(4674832-4674889)
chr5 (16-73)||(6447497-6447554)
chr5 (16-73)||(9408967-9409024)
chr5 (20-73)||(28378082-28378135)
chr5 (16-73)||(32158431-32158488)
chr5 (16-112)||(2029106-2029202)
chr5 (18-82)||(6614046-6614110)
chr5 (16-55)||(26169047-26169086)
chr5 (18-73)||(36045151-36045206)
chr5 (20-70)||(4418334-4418383)
chr5 (16-54)||(9963437-9963475)
chr5 (19-97)||(10943740-10943818)
chr5 (16-73)||(1463892-1463949)
chr5 (16-73)||(31934892-31934949)
chr5 (16-73)||(39760095-39760152)
chr5 (21-53)||(24653168-24653200)
chr5 (16-56)||(40339133-40339173)
[»] chr7 (21 HSPs)
chr7 (16-64)||(30699823-30699871)
chr7 (16-97)||(7262991-7263072)
chr7 (16-73)||(27047732-27047789)
chr7 (18-73)||(24304300-24304355)
chr7 (16-75)||(46716354-46716413)
chr7 (16-58)||(38025362-38025404)
chr7 (16-73)||(48525599-48525655)
chr7 (21-73)||(35195869-35195921)
chr7 (18-65)||(43970878-43970925)
chr7 (16-54)||(2366378-2366416)
chr7 (21-75)||(39524714-39524767)
chr7 (21-62)||(10020497-10020538)
chr7 (18-55)||(15912798-15912835)
chr7 (16-73)||(20527446-20527503)
chr7 (16-73)||(30152762-30152819)
chr7 (20-73)||(36315991-36316044)
chr7 (16-53)||(41139108-41139145)
chr7 (20-73)||(45198115-45198168)
chr7 (16-97)||(22741224-22741307)
chr7 (17-97)||(42887176-42887256)
chr7 (16-64)||(44437851-44437899)
[»] chr4 (36 HSPs)
chr4 (16-64)||(9172397-9172445)
chr4 (18-96)||(6637716-6637794)
chr4 (16-73)||(36954158-36954215)
chr4 (18-73)||(27296845-27296900)
chr4 (16-82)||(20181232-20181298)
chr4 (16-73)||(8690235-8690292)
chr4 (16-73)||(32885709-32885766)
chr4 (20-97)||(33944356-33944433)
chr4 (16-97)||(34773676-34773757)
chr4 (16-73)||(35333005-35333062)
chr4 (16-73)||(48501675-48501732)
chr4 (16-73)||(51077888-51077945)
chr4 (16-73)||(53815717-53815774)
chr4 (24-64)||(15507575-15507615)
chr4 (17-57)||(15640476-15640516)
chr4 (16-80)||(42411464-42411528)
chr4 (16-96)||(53697974-53698054)
chr4 (16-67)||(26708575-26708625)
chr4 (18-73)||(40150496-40150551)
chr4 (16-82)||(9084780-9084846)
chr4 (19-73)||(22751033-22751087)
chr4 (27-61)||(42425919-42425953)
chr4 (16-73)||(14149814-14149871)
chr4 (16-73)||(23661375-23661432)
chr4 (16-73)||(28520748-28520805)
chr4 (16-73)||(36008296-36008353)
chr4 (16-73)||(37032196-37032253)
chr4 (20-97)||(43327318-43327395)
chr4 (16-73)||(47017963-47018020)
chr4 (20-73)||(47416493-47416546)
chr4 (16-73)||(48968227-48968284)
chr4 (16-73)||(56314782-56314839)
chr4 (16-97)||(56546442-56546523)
chr4 (16-64)||(5635210-5635258)
chr4 (17-73)||(35451138-35451194)
chr4 (29-73)||(56555582-56555626)
[»] chr1 (37 HSPs)
chr1 (18-82)||(48110552-48110616)
chr1 (16-73)||(11802037-11802094)
chr1 (16-97)||(15368826-15368907)
chr1 (16-97)||(23930537-23930618)
chr1 (16-55)||(4429517-4429556)
chr1 (21-64)||(43020637-43020680)
chr1 (16-97)||(4354098-4354179)
chr1 (27-76)||(5315594-5315643)
chr1 (15-64)||(11907328-11907377)
chr1 (16-73)||(29491491-29491548)
chr1 (16-73)||(37733776-37733833)
chr1 (25-73)||(8227977-8228025)
chr1 (16-55)||(16110055-16110094)
chr1 (16-55)||(20357481-20357520)
chr1 (16-55)||(20562435-20562474)
chr1 (16-55)||(49251430-49251469)
chr1 (15-73)||(11405476-11405534)
chr1 (16-98)||(23463978-23464060)
chr1 (22-64)||(23758279-23758321)
chr1 (18-55)||(749621-749658)
chr1 (18-95)||(11213444-11213521)
chr1 (16-73)||(15774329-15774386)
chr1 (16-73)||(17350082-17350139)
chr1 (20-73)||(27745182-27745235)
chr1 (16-97)||(29331157-29331238)
chr1 (16-73)||(46116191-46116248)
chr1 (16-97)||(49916461-49916542)
chr1 (16-73)||(52833123-52833180)
chr1 (21-73)||(2903044-2903096)
chr1 (20-60)||(5680737-5680777)
chr1 (20-96)||(8865171-8865247)
chr1 (16-64)||(18923911-18923959)
chr1 (28-64)||(28564343-28564379)
chr1 (21-73)||(31965538-31965590)
chr1 (17-73)||(35619025-35619081)
chr1 (17-53)||(40814803-40814839)
chr1 (24-64)||(43092182-43092222)
[»] chr6 (23 HSPs)
chr6 (16-97)||(34365756-34365837)
chr6 (16-64)||(9438323-9438371)
chr6 (16-55)||(19165372-19165411)
chr6 (16-73)||(10377141-10377198)
chr6 (24-72)||(22850840-22850888)
chr6 (15-55)||(31949860-31949900)
chr6 (16-55)||(18244047-18244086)
chr6 (18-73)||(26528590-26528645)
chr6 (16-55)||(32057055-32057094)
chr6 (18-73)||(35190786-35190841)
chr6 (18-64)||(10373618-10373664)
chr6 (21-55)||(25064704-25064738)
chr6 (16-73)||(2945617-2945674)
chr6 (16-73)||(5288362-5288419)
chr6 (16-73)||(23771054-23771111)
chr6 (17-62)||(26878822-26878867)
chr6 (21-73)||(1488114-1488166)
chr6 (16-112)||(3448373-3448469)
chr6 (20-64)||(7392563-7392607)
chr6 (16-80)||(9064887-9064951)
chr6 (21-73)||(11520743-11520795)
chr6 (27-63)||(19374839-19374875)
chr6 (15-55)||(34792879-34792919)
[»] scaffold0343 (1 HSPs)
scaffold0343 (16-64)||(8581-8629)
[»] scaffold0308 (1 HSPs)
scaffold0308 (16-73)||(7097-7154)
[»] scaffold0070 (1 HSPs)
scaffold0070 (16-73)||(12586-12643)
[»] scaffold0036 (1 HSPs)
scaffold0036 (16-73)||(25047-25104)
[»] scaffold0008 (1 HSPs)
scaffold0008 (16-73)||(43714-43770)
[»] scaffold0227 (1 HSPs)
scaffold0227 (18-73)||(21873-21927)
[»] scaffold1990 (1 HSPs)
scaffold1990 (16-53)||(915-952)
[»] scaffold0092 (1 HSPs)
scaffold0092 (16-53)||(47354-47391)
[»] scaffold0191 (1 HSPs)
scaffold0191 (16-64)||(16868-16915)
[»] scaffold0011 (1 HSPs)
scaffold0011 (21-73)||(19412-19464)


Alignment Details
Target: chr2 (Bit Score: 139; Significance: 8e-73; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 44955369 - 44955146
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgacnnn 115  Q
    ||||||||||||||||||||  | ||||||||||||||||||| ||||| ||||||||||| |||||||||  |||||||||||||| ||| || ||       
T  44955369 ggacaatgcattattatatgtcgcggttggggttcgaacctcggacaccccatttatttatcttatacagtaaattctagccgatagattacctcacaaa 44955270  T
Q  116 nnnn-tacattaaaataacctaggaataattttacaatcttgttcaaagccaaaaattatttttattcttaattttaaattccagggttgttcaacaaag 214  Q
         ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44955269 aaaaatacattaaaataacctaggaataattttacagtcttgttcaaagccaaaaattatttttattcttaattttaaattccagggttgttcaacaaag 44955170  T
Q  215 catcctacagcattcccatttcat 238  Q
    ||||| |||||||||| |||||||    
T  44955169 catcccacagcattccgatttcat 44955146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 44721776 - 44721682
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 112  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||| |  |||||  ||| |||||||||  |||||||||||||    
T  44721776 acaatgcattattatatgcaggggtcggggttcgaacctcggacaccccatttattcaccttataaggtgaattctagccactaggttatctgac 44721682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 22538560 - 22538617
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||    
T  22538560 ggacaatgcattattatatgcaggggttggggttcgaatcccgaacacctcacttatt 22538617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 9796915 - 9796997
Alignment:
Q  13 gatggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctag 95  Q
    |||||||||||||||||||||||||| ||| |||||||||||| || ||||| || ||||| || |||||  ||| |||||||    
T  9796915 gatggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcatcttataaggtgaattctag 9796997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 23683717 - 23683795
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattcta 94  Q
    ||||||| |||||||||||| || ||||||||||||||||||  ||||| |||||||| || ||||| |||| ||||||    
T  23683717 ggacaatacattattatatgtaggggttggggttcgaacctcagacaccccatttattcatcttataaagtgaattcta 23683795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 36665451 - 36665517
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| ||||| || ||||| ||||||||    
T  36665451 ggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcattttata 36665517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 32891620 - 32891677
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||||||| || |||||    
T  32891620 ggacaatgcattattatatgcaggggttggggttcgaaccctgaacaccccacttatt 32891677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 36426930 - 36426849
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||| || |||||||||||||||  |||||||| || ||||| || |||||  ||| |||||||||    
T  36426930 ggacaatgcattattatatgtaggggttggggttcgaactccgaacaccccacttattcatcttataaggtgaattctagcc 36426849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 2114507 - 2114452
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||| || ||| |||||||||||| || ||||||||||||||    
T  2114507 acaatgcattattatatgtaggggtcggggttcgaaccccggacacctcatttatt 2114452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 24034127 - 24034080
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacac 63  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  24034127 ggacaatgcattattatatgcaggggtcggggttcgaacctcggacac 24034080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 16028182 - 16028144
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaac 54  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  16028182 ggacaatgcattattatatgcagtggtcggggttcgaac 16028144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 32988372 - 32988450
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctag 95  Q
    ||||||||||||||||| |||| || |||||||||||| ||||||||| || |||||   |||||| |||| |||||||    
T  32988372 gacaatgcattattatacgcaggggctggggttcgaacatcgaacaccccacttattctctttataaagtgaattctag 32988450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 22297526 - 22297469
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| ||||||||    
T  22297526 ggacaatgcattattatatgcaggggcaggggttcgaaccccggacaccccatttatt 22297469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 9802910 - 9802970
Alignment:
Q  13 gatggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||||||  ||| |||||||||||| || ||||| || |||||    
T  9802910 gatggacaatgcattattatatgcaagggtcggggttcgaaccccggacaccccacttatt 9802970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 11133097 - 11133193
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 112  Q
    |||||||||||| |||||||||| ||| |||||||||||| || ||||| || ||||| |  |||||  ||| |||||||||  ||||||| |||||    
T  11133097 ggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggttacctgac 11133193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 17239924 - 17239988
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    ||||||||||||||||||||| ||| ||| ||||||||||| ||||| || ||||| || |||||    
T  17239924 acaatgcattattatatgcaggggtcgggattcgaacctcggacaccccacttattcatcttata 17239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 25731956 - 25732012
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||| ||| || |||||||||||| ||||| || |||||    
T  25731956 gacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttatt 25732012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 10262760 - 10262799
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  10262760 ggacaatgcattattatatgcaggggtcggggttcgaacc 10262799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 41699129 - 41699180
Alignment:
Q  22 tgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||| ||| |||||||||||| |||||||| || |||||    
T  41699129 tgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttatt 41699180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 9547201 - 9547115
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgatag 102  Q
    |||||||| |||||||||||||| ||  |||||||||| | |||||||| || ||||| || |||||  ||| ||||||||| ||||    
T  9547201 ggacaatgtattattatatgcaggggccggggttcgaatcccgaacaccccacttattcatcttataaggtgaattctagccaatag 9547115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 27495559 - 27495605
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaaca 62  Q
    ||||||||||||||||||||||| ||||| | |||||||| ||||||    
T  27495559 ggacaatgcattattatatgcaggggttgagattcgaaccccgaaca 27495605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 39726508 - 39726462
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaaca 62  Q
    |||||||||||||||||||| || ||| | |||||||||||||||||    
T  39726508 ggacaatgcattattatatgtaggggtcgaggttcgaacctcgaaca 39726462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 580857 - 580800
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  580857 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 580800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 15392285 - 15392204
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||| ||  |  | ||||||||||||| |||||||| ||||| | ||||||  ||||||| |||||    
T  15392285 ggacaatgcattattatatgtaggagacgaggttcgaacctcggacacctcacttattcactttataaggtgtattttagcc 15392204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 17154670 - 17154727
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  17154670 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 17154727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 19905730 - 19905681
Alignment:
Q  15 tggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    |||||||||||||||||||| ||| ||| |||||||||||| || |||||    
T  19905730 tggacaatgcattattatatacaggggtcggggttcgaaccccggacacc 19905681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 29034997 - 29035054
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  29034997 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 29035054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 32943360 - 32943397
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaa 53  Q
    ||||||||||||||||||||||| || |||||||||||    
T  32943360 ggacaatgcattattatatgcagaggctggggttcgaa 32943397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 36520854 - 36520797
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||| || ||| |||||||||||| || ||||| || |||||    
T  36520854 ggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttatt 36520797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 2304311 - 2304375
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttatttta 80  Q
    |||||||| ||||||||||| || ||| |||||||||||| || ||||| || ||||||| ||||    
T  2304311 ggacaatgtattattatatgtaggggtcggggttcgaaccccggacaccccacttatttacttta 2304375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 31956887 - 31956935
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    |||||||||||||||||||| || || ||||||||||||  ||||||||    
T  31956887 ggacaatgcattattatatgtaggggctggggttcgaactccgaacacc 31956935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 40471179 - 40471231
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||| ||||||| |||||| | |||||||| || |||||    
T  40471179 atgcattattatatgcaggggttgggattcgaatcccgaacaccccacttatt 40471231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 50724387 - 50724445
Alignment:
Q  15 tggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||    
T  50724387 tggacaatgcattattatatgcaggggttggggttcgaacctcggacaccccacttatt 50724445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 50788461 - 50788403
Alignment:
Q  15 tggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||    
T  50788461 tggacaatgcattattatatgcaggggttggggttcgaacctcggacaccccacttatt 50788403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 13540038 - 13539957
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||| || |||||||||||||||| || ||||| || |||||||  |||||  ||| |||||||||    
T  13540038 ggacaatgcattattatatgtaggggttggggttcgaaccccggacaccccacttatttaccttataaggtgaattctagcc 13539957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 36331800 - 36331719
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| || ||||| | |||| | |||| |||||||||    
T  36331800 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaaagtgaattctagcc 36331719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 49146105 - 49146186
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| || ||||| | ||||||  ||| |||||||||    
T  49146105 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttataaggtgaattctagcc 49146186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 28226259 - 28226204
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||| || |||||    
T  28226259 acaatgcattattatatgcaggggttggggttcgaatcccgaacaccccacttatt 28226204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 55195935 - 55195869
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    |||||||||||||| ||||| || |||||| ||||||||  ||||||||||||||||| || |||||    
T  55195935 ggacaatgcattatcatatgtaggggttggagttcgaactccgaacacctcatttattcatcttata 55195869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 13616148 - 13616067
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||| || ||| || |||||||||||| ||||| || ||||| || |||||  ||| |||||||||    
T  13616148 ggacaatgcattattatatgtaggggtcggagttcgaacctcggacaccccacttattcatcttataaggtgaattctagcc 13616067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 14868706 - 14868763
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| |||||||| || |||||    
T  14868706 ggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttatt 14868763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 31698558 - 31698635
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||  |  ||||||||||||||||||||| || ||||| || |||||  ||| |||||||||    
T  31698558 aatgcattattatatgcaggagccggggttcgaacctcgaacaccccacttattcatcttataaggtgaattctagcc 31698635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 32508864 - 32508811
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||| || |||||    
T  32508864 aatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttatt 32508811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 33206778 - 33206835
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| || ||||||||||||| || ||||| || |||||    
T  33206778 ggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttatt 33206835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 36727536 - 36727456
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| ||||| || ||||| || |||||  ||| |||||||||    
T  36727536 ggacaatgcattattatatgcaa-ggtcggggttcgaacctcggacaccccacttattcatcttataaggtgaattctagcc 36727456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 43566870 - 43566829
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctc 57  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  43566870 ggacaatgcattattatatgcaggggtcggggttcgaacctc 43566829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 47191394 - 47191451
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| || ||| ||||||||| |||||||| || |||||    
T  47191394 ggacaatgcattattatatgcaggggctggagttcgaaccccgaacaccccacttatt 47191451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 38555100 - 38555045
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||| || | ||||||||||||| ||||||||| |||||    
T  38555100 gacaatgcattattatatgcag-gggtcgggttcgaacctcaaacacctcacttatt 38555045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 43598821 - 43598876
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||| || |||||    
T  43598821 gacaatgcattattatatgcagaggtcggggttcgaa-ctcgaacaccccacttatt 43598876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 19540362 - 19540413
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctca 67  Q
    ||||||| |||||||||||||||  | ||||||||||||| |||||||||||    
T  19540362 ggacaatacattattatatgcaggagctggggttcgaaccccgaacacctca 19540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 44953230 - 44953139
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 112  Q
    |||||||||||||||||| |||||  ||||||||| |  |||||||||||||| |  |||||  ||| |||||||||  ||| |||||||||    
T  44953230 atgcattattatatgcaggggttgatgttcgaaccccagacacctcatttattcaccttataatgtgaattctagccactagattatctgac 44953139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 34407159 - 34407125
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacc 55  Q
    |||||||||||||||||| ||||||||||||||||    
T  34407159 atgcattattatatgcaggggttggggttcgaacc 34407125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 37059472 - 37059534
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    ||||||||||||||||||| || ||| ||||||| | ||||||||||| ||||| || |||||    
T  37059472 aatgcattattatatgcaggggctggagttcgaatcccgaacacctcacttattcatcttata 37059534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 9625004 - 9625061
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  9625004 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 9625061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 14417889 - 14417946
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| || ||| ||||||||| || ||||| || |||||    
T  14417889 ggacaatgcattattatatgcaggggctggagttcgaaccccggacaccccacttatt 14417946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 27183755 - 27183698
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  27183755 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 27183698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 35483290 - 35483327
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaa 53  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  35483290 ggacaatgcattattatatgcaggggtcggggttcgaa 35483327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 36476380 - 36476437
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  || ||||||||| |||||||| || |||||    
T  36476380 ggacaatgcattattatatgcaggggccggagttcgaaccccgaacaccccacttatt 36476437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 40786301 - 40786342
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctc 57  Q
    ||||||||||||||||||||||  ||| ||||||||||||||    
T  40786301 ggacaatgcattattatatgcatgggtcggggttcgaacctc 40786342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 49639049 - 49639106
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||| || ||  |||||||||||| |||||||| || |||||    
T  49639049 ggacaatgcattattatatgtaggggccggggttcgaaccccgaacaccccacttatt 49639106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 53467970 - 53468026
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| ||||| || |||||    
T  53467970 ggacaatgcattattatatgcag-gggcggggttcgaacctcggacaccccacttatt 53468026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 3784091 - 3784139
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||| ||| ||| |||||||||||| || |||||    
T  3784091 ggacaatgcattattatatacaggggtcggggttcgaaccccggacacc 3784139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 24751334 - 24751286
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||| ||  |||||||||||| || |||||    
T  24751334 ggacaatgcattattatatgcaggggccggggttcgaaccccggacacc 24751286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 26583127 - 26583179
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||| ||| |||||||||||  || |||||||| |||||    
T  26583127 atgcattattatatgcaggggtcggggttcgaactacggacacctcaattatt 26583179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 28951892 - 28951944
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||| |||  ||||||||||| |||||||| || |||||    
T  28951892 atgcattattatatgcaggggtcagggttcgaaccccgaacaccccacttatt 28951944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 34136786 - 34136822
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaac 54  Q
    |||||||||||||||||| || |||||||||||||||    
T  34136786 acaatgcattattatatgtaggggttggggttcgaac 34136822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 37279650 - 37279686
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaac 54  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  37279650 acaatacattattatatgcagaggttggggttcgaac 37279686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 41121892 - 41121940
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||| ||| ||||||| |||| || |||||    
T  41121892 ggacaatgcattattatatgcagaggtcggggttcaaaccccggacacc 41121940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 43774206 - 43774302
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 112  Q
    |||||||||||| |||||||||| ||| |||||||||||| |  ||||| || ||||| |  |||||  ||| |||||||||  ||||||| |||||    
T  43774206 ggacaatgcattgttatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactaggttacctgac 43774302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 48173308 - 48173364
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||| |  |||||| ||||||||| || |||||||| |||||    
T  48173308 gacaatgcattattatatgtatgggttggagttcgaaccccggacacctcacttatt 48173364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 6978845 - 6978922
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||| |||||||||||||||| |||||||  |||||||| |  ||||| |||| |||||||||    
T  6978845 aatgcattattatatgcaggggttggggttcgaaccacgaacactccatttattcaccttataaagtgaattctagcc 6978922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 6064397 - 6064455
Alignment:
Q  15 tggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| |||| ||| |||||    
T  6064397 tggacaatgcattattatatgcaggggtcggggttcgaacctcggacacttcacttatt 6064455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 6970720 - 6970674
Alignment:
Q  14 atggacaatgcattattatatgcagtggttggggttcgaacctcgaa 60  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||    
T  6970720 atggacaatgcattattatatgcagaagttggggttcgaacctcgaa 6970674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 12560060 - 12560111
Alignment:
Q  24 cattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 75  Q
    |||| |||||||||| |||||||||||||||||| ||||||||| |||||||    
T  12560060 cattgttatatgcaggggttggggttcgaacctcaaacacctcacttattta 12560111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 25119229 - 25119268
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  25119229 ggacaatgcattattatatgcaggggttggggttcgaacc 25119268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 30942673 - 30942614
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| |||||||| || |||||||    
T  30942673 ggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattta 30942614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 13702423 - 13702369
Alignment:
Q  19 caatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||| ||| ||||||||||||||  |||||||| |||||    
T  13702423 caatgcattattatatgcaggggtcggggttcgaacctcagacacctcacttatt 13702369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 1588788 - 1588845
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| ||||| || |||||    
T  1588788 ggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttatt 1588845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 7649550 - 7649606
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||| || || |||||||||||||||||||||| || |||||    
T  7649550 ggacaatgcattattatatgtag-ggctggggttcgaacctcgaacaccccacttatt 7649606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 24074527 - 24074584
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||| || |||||  |||||||||||| |||||||| |||||    
T  24074527 ggacaatgcattattatatgtaggggttgaagttcgaacctcggacacctcacttatt 24074584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 26703964 - 26703907
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||  ||| |||||||||| | ||||||||||| |||||    
T  26703964 ggacaatgcattattatatgcaagggtcggggttcgaatcccgaacacctcacttatt 26703907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 5323944 - 5324000
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||| ||| |||||||||||| || || ||||| |||||    
T  5323944 gacaatgcattattatatgcaggggtcggggttcgaaccccggactcctcagttatt 5324000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 25139959 - 25139915
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaaca 62  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||    
T  25139959 acaatgcattattatatgcaggggtcggggttcgaaccccgaaca 25139915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 43847723 - 43847771
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  43847723 ggacaatgcattattatatgcaggggccggggttcgaaccccgaacacc 43847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 2376539 - 2376586
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacac 63  Q
    ||||||||||||||||||||||| |||  |||||||||||||| ||||    
T  2376539 ggacaatgcattattatatgcaggggtccgggttcgaacctcggacac 2376586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 4293904 - 4293943
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  4293904 ggacaatgcattattatatgcaggggtcggggttcgaacc 4293943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 7603752 - 7603787
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcg 51  Q
    ||||||||||||||||||||||||||| ||||||||    
T  7603752 ggacaatgcattattatatgcagtggtcggggttcg 7603787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 42688077 - 42688136
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 75  Q
    |||||||||||||||||||| || ||| ||| |||||||| |||||||| || |||||||    
T  42688077 ggacaatgcattattatatgtaggggtcgggattcgaaccccgaacaccccacttattta 42688136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 2282597 - 2282547
Alignment:
Q  30 tatatgcagtggttggggttcgaacctcgaacacctcatttatttatttta 80  Q
    |||||| || ||||| |||||||| ||||||||||||| ||||||||||||    
T  2282597 tatatgtagaggttgaggttcgaatctcgaacacctcacttatttatttta 2282547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 23857398 - 23857316
Alignment:
Q  16 ggacaatgcattattatatgca-gtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||||| | ||  ||||||||||||||| |||||  | ||||| || |||||| ||| |||||||||    
T  23857398 ggacaatgcattattatatgcagggggccggggttcgaacctcggacacccgacttattcatcttatacggtgaattctagcc 23857316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 35301237 - 35301199
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaac 54  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  35301237 ggacaatgcattattatatgcaggggtcggggttcgaac 35301199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 1033034 - 1032978
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| || ||||||||| |||||||| || |||||    
T  1033034 ggacaatgcattattatatgcaggggtcggagttcgaacc-cgaacaccccacttatt 1032978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 2696554 - 2696611
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  2696554 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 2696611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 2800040 - 2800097
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  2800040 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 2800097  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 8034551 - 8034608
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||||  |  |||||||||||| |||||||| || |||||    
T  8034551 ggacaatgcattattatatgcaggagccggggttcgaaccccgaacaccccacttatt 8034608  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 10199816 - 10199759
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| | |||||| || |||||    
T  10199816 ggacaatgcattattatatgcaggggccggggttcgaaccccaaacaccccacttatt 10199759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 10292373 - 10292430
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| || || | ||||||||||| ||||| || |||||    
T  10292373 ggacaatgcattattatatgcaggggctgagattcgaacctcggacaccccacttatt 10292430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 10970291 - 10970344
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||| || |||||||| |||| |||||||| || |||||    
T  10970291 aatgcattattatatgcaggggctggggttcaaaccccgaacaccccacttatt 10970344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 12676271 - 12676308
Alignment:
Q  27 tattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  12676271 tattatatgcagaggttggggttcgaaccccgaacacc 12676308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 15042439 - 15042382
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  15042439 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 15042382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 22426422 - 22426479
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||| || ||||| |||||||||| |  ||||| ||||||||    
T  22426422 ggacaatgcattattatatgtaggggttgaggttcgaacccctgacaccccatttatt 22426479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 27868735 - 27868784
Alignment:
Q  24 cattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||| |||||| ||||||| |||||||| | ||||||||    
T  27868735 cattattatatgcaggggttggtgttcgaatctcgaacatcccatttatt 27868784  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 33570503 - 33570446
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||| |||||||||  ||| ||||||||||||||| ||||| || |||||    
T  33570503 ggacaatgcattgttatatgcatgggtcggggttcgaacctcggacaccccacttatt 33570446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 10573136 - 10573172
Alignment:
Q  27 tattatatgcagtggttggggttcgaacctcgaacac 63  Q
    |||||||||||| |||||||||||||||| |||||||    
T  10573136 tattatatgcaggggttggggttcgaaccccgaacac 10573172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 25470915 - 25470863
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||| ||  ||| ||||||||||||||| ||||| ||||||||    
T  25470915 atgcattattatattcatgggtcggggttcgaacctcggacaccccatttatt 25470863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 35556460 - 35556412
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||| |||||| || |||||||||||||||| || |||||    
T  35556460 ggacaatgcattagtatatgtaggggttggggttcgaaccccggacacc 35556412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 3102201 - 3102120
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||| ||||||| ||  || |||||||||||| |||||||| |||||||||| |||||| |||| |||||||||    
T  3102201 ggacaatgcattgttatatgtaggagtcggggttcgaaccccgaacaccccatttatttactttataaagtgaattctagcc 3102120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 7147088 - 7147034
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 75  Q
    |||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||    
T  7147088 atgcattattatatgcaggggtcggggttcgaacctctgacacctcatttattta 7147034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 19982318 - 19982256
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    ||||||||||||||||||| |||||  ||||||||| |||||||| ||||||||||| |||||    
T  19982318 aatgcattattatatgcaggggttgaagttcgaaccccgaacaccccatttatttatcttata 19982256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 18872542 - 18872599
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||||| || |||||    
T  18872542 ggacaatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttatt 18872599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 27440372 - 27440324
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  27440372 ggacaatgcattattatatgcagtggtcgaggttcgaaccccgaacacc 27440324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 14487582 - 14487624
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcg 58  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  14487582 ggacaatgcattattatatgtaggggttggggttcgaacctcg 14487624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 42801511 - 42801449
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    ||||||||||||||||||| ||| |||||||||||| || |||||||| ||||| || |||||    
T  42801511 aatgcattattatatgcaggggtcggggttcgaaccccggacacctcacttattcatcttata 42801449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 4674889 - 4674832
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| || |||||    
T  4674889 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttatt 4674832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 6447554 - 6447497
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| ||||| || |||||    
T  6447554 ggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttatt 6447497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 9409024 - 9408967
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||| |||||||||| ||| || ||||||||| || ||||||||||||||    
T  9409024 ggacaatgcattgttatatgcaggggtcggagttcgaaccccggacacctcatttatt 9408967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 28378135 - 28378082
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||| || |||||||||||||||| |||||||| || |||||    
T  28378135 aatgcattattatatgtaggggttggggttcgaaccccgaacaccccacttatt 28378082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 32158488 - 32158431
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| |||||||| || |||||    
T  32158488 ggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttatt 32158431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 2029202 - 2029106
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 112  Q
    |||||||| |||||||||||||| ||| ||| |||||||| |||||||| || ||||| |  |||||  ||| |||||||||  |||| ||||||||    
T  2029202 ggacaatgtattattatatgcaggggtcgggattcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaggctatctgac 2029106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 6614110 - 6614046
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    ||||||||||||||||||||| ||  ||||||||||||||| ||||| || ||||| || |||||    
T  6614110 acaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcatcttata 6614046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 26169086 - 26169047
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  26169086 ggacaatgcattattatatgcaggggttggagttcgaacc 26169047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 36045206 - 36045151
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||| ||| |||||||||||| || ||||| || |||||    
T  36045206 acaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttatt 36045151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 4418383 - 4418334
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcattt 70  Q
    |||||||| |||||||||| || |||||||||||||||| |||||||||||    
T  4418383 aatgcatt-ttatatgcaggggctggggttcgaacctcggacacctcattt 4418334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 9963437 - 9963475
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaac 54  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  9963437 ggacaatgcattgttatatgcaggggttggggttcgaac 9963475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 10943740 - 10943818
Alignment:
Q  19 caatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||| ||  |||||||||||| || ||||| || ||||| | |||| | |||| |||||||||    
T  10943740 caatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaaagtgaattctagcc 10943818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 1463892 - 1463949
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  1463892 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 1463949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 31934949 - 31934892
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| | ||| ||||||||  ||| ||||| ||||||||    
T  31934949 ggacaatgcattattatatgcagagattgaggttcgaatttcggacaccccatttatt 31934892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 39760095 - 39760152
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||| |||||||||||||| |||||| ||| ||||| |||||| | ||||||||    
T  39760095 ggacaatgtattattatatgcaggggttggagtttgaaccccgaacatcccatttatt 39760152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 24653168 - 24653200
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaa 53  Q
    |||||||||||||||||| ||||||||||||||    
T  24653168 atgcattattatatgcaggggttggggttcgaa 24653200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 40339173 - 40339133
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacct 56  Q
    ||||||||||||||||||||||| ||  |||||||||||||    
T  40339173 ggacaatgcattattatatgcaggggccggggttcgaacct 40339133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 30699823 - 30699871
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||    
T  30699823 ggacaatgcattattatatgtaggggttggggttcgaacctcgaacacc 30699871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 7263072 - 7262991
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||| || |||||| ||||||||| ||||||||  ||||||| || |||||  ||| |||||||||    
T  7263072 ggacaatgcattattatatgtagaggttggagttcgaaccccgaacaccctatttattcatcttataaggtgaattctagcc 7262991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 27047789 - 27047732
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| ||||| ||||||||    
T  27047789 ggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccatttatt 27047732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 24304355 - 24304300
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||| ||| |||||||||||  |||||||| ||||||||    
T  24304355 acaatgcattattatatgcaggggtcggggttcgaactccgaacaccccatttatt 24304300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 46716354 - 46716413
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 75  Q
    ||||||||||||||||||||||| ||| ||||||||||||  ||||||| || |||||||    
T  46716354 ggacaatgcattattatatgcagaggtcggggttcgaaccctgaacaccccacttattta 46716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 38025362 - 38025404
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcg 58  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  38025362 ggacaatgcattattatatgcaggagttggggttcgaacctcg 38025404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 48525599 - 48525655
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||| ||||||||||| |||||||||||||||| || |||||||| |||||    
T  48525599 ggacaatgcat-attatatgcaggggttggggttcgaaccccggacacctcacttatt 48525655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 35195869 - 35195921
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||| ||  |||||||||||| |||||||| ||||||||    
T  35195869 atgcattattatatgcaggggccggggttcgaaccccgaacaccccatttatt 35195921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 43970925 - 43970878
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacct 65  Q
    |||||||||||||||||||||  |  ||||||||||||||||||||||    
T  43970925 acaatgcattattatatgcagaagacggggttcgaacctcgaacacct 43970878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 2366378 - 2366416
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaac 54  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  2366378 ggacaatgcattattatatgcaggggtcggggttcgaac 2366416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 39524714 - 39524767
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 75  Q
    ||||||| |||||||||| ||||| |||||||| | |||||||||||||||||||    
T  39524714 atgcattgttatatgcaggggttgaggttcgaatc-cgaacacctcatttattta 39524767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 10020538 - 10020497
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaaca 62  Q
    ||||||| |||||||||| |||||||||||||||| ||||||    
T  10020538 atgcattgttatatgcaggggttggggttcgaaccccgaaca 10020497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 15912798 - 15912835
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacc 55  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  15912798 acaatgcattgttatatgcaggggttggggttcgaacc 15912835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 20527503 - 20527446
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||    
T  20527503 ggacaatgcattgttatatgcaggggccggagttcgaaccccgaacacctcacttatt 20527446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 30152762 - 30152819
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||  || ||| |||||||||||| |||||||| || |||||    
T  30152762 ggacaatgcattattatatataggggtcggggttcgaaccccgaacaccccacttatt 30152819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 36316044 - 36315991
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||| ||  ||||||||||||||| ||||| || |||||    
T  36316044 aatgcattattatatgcaggggccggggttcgaacctcggacaccccacttatt 36315991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 41139108 - 41139145
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaa 53  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  41139108 ggacaatgcattattatatgcaggggtcggggttcgaa 41139145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 45198168 - 45198115
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||| ||| | |||||||| || ||||| ||||||||    
T  45198168 aatgcattattatatgcagtgattgagattcgaaccccggacaccccatttatt 45198115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 22741224 - 22741307
Alignment:
Q  16 ggacaatgcattattatatgcagtggt--tggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||||||| ||   |||||||||| |||| ||||| || ||||| || |||||  ||| |||||||||    
T  22741224 ggacaatgcattattatatgcagtagtcagggggttcgaatctcggacaccccacttattcatcttataaggtgaattctagcc 22741307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 42887176 - 42887256
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||| ||||||||||||||| || || |||||||||| || ||||| || |||||||  |||||  ||| |||||||||    
T  42887176 gacaattcattattatatgcaggggctgaggttcgaaccccggacaccccacttatttaccttataaggtgaattctagcc 42887256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 44437899 - 44437851
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||| ||  |||||||||||| || |||||    
T  44437899 ggacaatgcattattatatgcaggggccggggttcgaaccccggacacc 44437851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 9172445 - 9172397
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  9172445 ggacaatgcattattatatgcaggggtcggggttcgaacctcgaacacc 9172397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 6637794 - 6637716
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagc 96  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||| || ||||| || |||||  ||| ||||||||    
T  6637794 acaatacattattatatgcaggggttggggttcgaaccccgaacaccccacttattcatcttataaggtgaattctagc 6637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 36954158 - 36954215
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| ||||||||    
T  36954158 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccatttatt 36954215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 27296845 - 27296900
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||  || |||||||||||||||| |||||| ||||||||||    
T  27296845 acaatgcattattatatataggggttggggttcgaaccccgaacatctcatttatt 27296900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 20181232 - 20181298
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    |||||||||| ||||||||| || ||| |||||||||| |||  |||||||||||||| ||||||||    
T  20181232 ggacaatgcagtattatatgtaggggtaggggttcgaatctcagacacctcatttattaattttata 20181298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 8690235 - 8690292
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| || |||||    
T  8690235 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttatt 8690292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 32885709 - 32885766
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| || |||||||||||| ||||| || |||||    
T  32885709 ggacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttatt 32885766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 33944433 - 33944356
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||| ||  ||||||||||||||||| ||  || ||||| ||||||||  ||| |||||||||    
T  33944433 aatgcattattatatgcaggggccggggttcgaacctcgaatactccacttattcattttataaggtgaattctagcc 33944356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 34773757 - 34773676
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||||||| || || |||||||||| || ||||| || ||||| | ||||||  ||| |||||||||    
T  34773757 ggacaatgcattattatatgcaggggctgaggttcgaaccccggacaccccacttattcactttataaggtgaattctagcc 34773676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 35333062 - 35333005
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||||||  || ||||||||  |||||||| ||||||||    
T  35333062 ggacaatgcattattatatgcagtggccggagttcgaactccgaacaccccatttatt 35333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 48501732 - 48501675
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||| |||||||||||||| || |||||||||||| ||||||||| || |||||    
T  48501732 ggacaatgtattattatatgcaggggctggggttcgaacatcgaacaccccacttatt 48501675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 51077888 - 51077945
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| || ||||||| |||||||||| || |||||    
T  51077888 ggacaatgcattattatatgcaggggtcggagttcgaatctcgaacaccccacttatt 51077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 53815717 - 53815774
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| || ||||||||||||| || ||||| || |||||    
T  53815717 ggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttatt 53815774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 15507575 - 15507615
Alignment:
Q  24 cattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  15507575 cattattatatgcaggggttggggttcgaaccccgaacacc 15507615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 15640516 - 15640476
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctc 57  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  15640516 gacaatgcattattatatgcagtgttcggggttcgaacctc 15640476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 42411528 - 42411464
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttatttta 80  Q
    ||||||||||| ||||||||||| ||| |||||||||||| || ||||| || ||||||| ||||    
T  42411528 ggacaatgcataattatatgcaggggtcggggttcgaaccccggacaccccacttatttacttta 42411464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 53698054 - 53697974
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagc 96  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||||  |||||  ||| ||||||||    
T  53698054 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatttaccttataaggtgaattctagc 53697974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 26708625 - 26708575
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctca 67  Q
    ||||||||||||||||||||||| |||| |||||||||||||  ||||||||    
T  26708625 ggacaatgcattattatatgcaggggtt-gggttcgaacctcagacacctca 26708575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 40150496 - 40150551
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||| ||| ||| |||||||||||| || |||||||| |||||    
T  40150496 acaatgcattattatatacaggggtcggggttcgaaccccggacacctcacttatt 40150551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 9084780 - 9084846
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    |||||||||||| |||||||||| ||| ||| ||||||||||| ||||| || ||||| || |||||    
T  9084780 ggacaatgcattgttatatgcaggggtcgggattcgaacctcggacaccccacttattcatcttata 9084846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 22751033 - 22751087
Alignment:
Q  19 caatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||| ||||||||||||| ||| ||||||| |||| |||||||| ||||||||    
T  22751033 caatgcgttattatatgcaggggtcggggttcaaaccccgaacaccccatttatt 22751087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 42425919 - 42425953
Alignment:
Q  27 tattatatgcagtggttggggttcgaacctcgaac 61  Q
    |||||||||||| ||||||||||||||||||||||    
T  42425919 tattatatgcagaggttggggttcgaacctcgaac 42425953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 14149814 - 14149871
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  14149814 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 14149871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 23661432 - 23661375
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||| ||||||| || ||| |||||||||||| |||||||| || |||||    
T  23661432 ggacaatgcattgttatatgtaggggtaggggttcgaaccccgaacaccccacttatt 23661375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 28520805 - 28520748
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  28520805 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 28520748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 36008296 - 36008353
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||| |||||||||| ||  |||||||||||| |||||||| || |||||    
T  36008296 ggacaatgcattgttatatgcaggggccggggttcgaaccccgaacaccccacttatt 36008353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 37032253 - 37032196
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| ||| |||||||| || ||||| || |||||    
T  37032253 ggacaatgcattattatatgcaggggtcgggattcgaaccccggacaccccacttatt 37032196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 43327395 - 43327318
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||| || | ||||||||||| || ||||| || |||||||  ||||| |||| ||| |||||    
T  43327395 aatgcattattatatgcagggggttgggttcgaaccccgcacaccccacttatttaccttataaagtgaattttagcc 43327318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 47018020 - 47017963
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  47018020 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 47017963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 47416493 - 47416546
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||| |||||||||||||| |||||||||||||| |||| ||||| || |||||    
T  47416493 aatggattattatatgcaggggttggggttcgaatctcggacaccccacttatt 47416546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 48968284 - 48968227
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  48968284 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 48968227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 56314782 - 56314839
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| |||  ||||||||||| || ||||| || |||||    
T  56314782 ggacaatgcattattatatgcaggggtcagggttcgaaccacggacaccacacttatt 56314839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 56546523 - 56546442
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||||||| ||  |||||||||||| |  ||||| || ||||| | |||| | |||| |||||||||    
T  56546523 ggacaatgcattattatatgcaggggccggggttcgaaccacagacaccccacttattcactttaaaaagtgaattctagcc 56546442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 5635210 - 5635258
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||| ||| ||||||| |||| || |||||    
T  5635210 ggacaatgcattattatatgcaggggtcggggttcaaaccccggacacc 5635258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 35451194 - 35451138
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||||| ||| || ||||||||  || |||||||| |||||    
T  35451194 gacaatgcattattatatgcaggggtcggagttcgaactacggacacctcacttatt 35451138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 56555582 - 56555626
Alignment:
Q  29 ttatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||| ||| ||||||||||||||||||||| || |||||    
T  56555582 ttatatgcaggggtcggggttcgaacctcgaacaccccacttatt 56555626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 48110552 - 48110616
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 82  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||| || |||||    
T  48110552 acaatgcattattatatgcaggggttggagttcgaacctcggacacctcacttattcatcttata 48110616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 11802094 - 11802037
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||| || |||||||||||||||| || |||| |||||||||    
T  11802094 ggacaatgcattattatatgtaggggttggggttcgaaccccggacacttcatttatt 11802037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 15368826 - 15368907
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || ||||| ||||||||  ||| |||||||||    
T  15368826 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcattttataaggtgaattctagcc 15368907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 23930618 - 23930537
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||||||| ||| ||||||||||||  | ||||| ||||||||||  ||||| |||| | |||||||    
T  23930618 ggacaatgcattattatatgcaggggtcggggttcgaaccctggacaccccatttatttaccttataaagtgaactctagcc 23930537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 4429556 - 4429517
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  4429556 ggacaatgcattattatatgcaggggttggggttcgaacc 4429517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 43020637 - 43020680
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    |||||||||||||||||| ||||||||||||||||||| |||||    
T  43020637 atgcattattatatgcaggggttggggttcgaacctcggacacc 43020680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 4354179 - 4354098
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||||||| ||  ||||||||||| ||| ||||| || ||||| |  ||||| |||| |||||||||    
T  4354179 ggacaatgcattattatatgcaggggccggggttcgaacttcggacaccccacttattcaccttataaagtgaattctagcc 4354098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 5315594 - 5315643
Alignment:
Q  27 tattatatgcagtggttggggttcgaacctcgaacacctcatttatttat 76  Q
    |||||||||||| |||||||||||||||| | || |||||||||||||||    
T  5315594 tattatatgcagaggttggggttcgaaccccaaatacctcatttatttat 5315643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 11907377 - 11907328
Alignment:
Q  15 tggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  11907377 tggacaatgcattattatatgcagaggccggggttcgaaccccgaacacc 11907328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 29491491 - 29491548
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| || |||||    
T  29491491 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttatt 29491548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 37733776 - 37733833
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||||||  |||||||||||| || ||||| || |||||    
T  37733776 ggacaatgcattattatatgcagtggacggggttcgaaccccggacaccccacttatt 37733833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 8227977 - 8228025
Alignment:
Q  25 attattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||| ||||||| ||||||||  ||||||||||||||||    
T  8227977 attattatatgcaggggttgggattcgaaccctgaacacctcatttatt 8228025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 16110094 - 16110055
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  16110094 ggacaatgcattattatatgcaggggttgaggttcgaacc 16110055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 20357481 - 20357520
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  20357481 ggacaatgcattattatatgcaggggctggggttcgaacc 20357520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 20562474 - 20562435
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  20562474 ggacaatgcattattatatgcaggggctggggttcgaacc 20562435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 49251469 - 49251430
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  49251469 ggacaatgcattattatatgcaggggtcggggttcgaacc 49251430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 11405476 - 11405534
Alignment:
Q  15 tggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||| |||||||||| ||| |||||||||||| || ||||| || |||||    
T  11405476 tggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttatt 11405534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 23464060 - 23463978
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccg 98  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || || || | ||||||  ||| ||||||||||    
T  23464060 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttgttcactttataaggtgaattctagccg 23463978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 23758321 - 23758279
Alignment:
Q  22 tgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||    
T  23758321 tgcattattatatgcaggggttgaggttcgaaccccgaacacc 23758279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 749658 - 749621
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacc 55  Q
    |||||||||||||||||| || ||||||||||||||||    
T  749658 acaatgcattattatatgtaggggttggggttcgaacc 749621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 11213521 - 11213444
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctag 95  Q
    ||||| |||||||||||| || |||||| ||||||||| || ||||| || ||||||| ||||||  ||| |||||||    
T  11213521 acaatacattattatatgtagaggttggagttcgaaccccggacaccccacttatttactttataaggtgaattctag 11213444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 15774386 - 15774329
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||||| || ||| |||||||||||| || ||||| || |||||    
T  15774386 ggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttatt 15774329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 17350082 - 17350139
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  17350082 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 17350139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 27745182 - 27745235
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||| | | |||||||||||| || ||||| ||||||||    
T  27745182 aatgcattattatatgcagggatcggggttcgaaccccggacaccccatttatt 27745235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29331238 - 29331157
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||||||||| |   ||| ||||||||||| |||||  |||||||||  |||||  ||| |||||||||    
T  29331238 ggacaatgcattattatatgcagggtccgggattcgaacctcggacaccctatttatttacattataaggtgaattctagcc 29331157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 46116248 - 46116191
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||| |||||||| || ||||||||||||| || ||||| || |||||    
T  46116248 ggacaatgcattatcatatgcaggggctggggttcgaaccccggacaccccaattatt 46116191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 49916461 - 49916542
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    |||||||||||||||||||| || ||| |||||||||| | || ||| | |||||||| || |||||  ||| |||||||||    
T  49916461 ggacaatgcattattatatgtaggggtcggggttcgaatcccggacatcccatttattcatattataaggtgaattctagcc 49916542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 52833180 - 52833123
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||| | ||||||||    
T  52833180 ggacaatgcattattatatgcaggggccggggttcgaaccccggacatcccatttatt 52833123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 2903096 - 2903044
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||| |||||||||| ||| |||||||||||| |||||||| || |||||    
T  2903096 atgcattgttatatgcagaggtcggggttcgaaccccgaacaccccacttatt 2903044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 5680737 - 5680777
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaa 60  Q
    |||||||||||||||| || ||| |||||||||||||||||    
T  5680737 aatgcattattatatgtaggggtcggggttcgaacctcgaa 5680777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 8865247 - 8865171
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagc 96  Q
    ||||||||||||||||||  | ||| ||||||||||  ||||||| || |||||||| |||||  ||| ||||||||    
T  8865247 aatgcattattatatgcaaggattgaggttcgaacccagaacaccccacttatttatcttataaggtgaattctagc 8865171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 18923959 - 18923911
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||| | |  |||||||||||||| |||||    
T  18923959 ggacaatgcattattatatgcagggttcagggttcgaacctcggacacc 18923911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 28564379 - 28564343
Alignment:
Q  28 attatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  28564379 attatatgcaggggttggggttcgaacctcggacacc 28564343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 31965538 - 31965590
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||||||||| | | |||||||||||  ||||||||||| |||||    
T  31965538 atgcattattatatgcagggatcggggttcgaactccgaacacctcacttatt 31965590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 35619081 - 35619025
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||| |||||||||||||| || ||| |||||||||||| |||||| | ||||||||    
T  35619081 gacattgcattattatatgtaggggtcggggttcgaaccccgaacatcccatttatt 35619025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 40814839 - 40814803
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaa 53  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  40814839 gacaatgcattattatatgcaggggtcggggttcgaa 40814803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 43092182 - 43092222
Alignment:
Q  24 cattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||| ||| ||||||||||||||| |||||    
T  43092182 cattattatatgcaggggtcggggttcgaacctcggacacc 43092222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 34365756 - 34365837
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 97  Q
    ||||||||||||||||| ||||| ||  ||||||||||||||||||||  || ||||| || ||||| |||| |||||||||    
T  34365756 ggacaatgcattattatgtgcaggggccggggttcgaacctcgaacactccacttattcatcttataaagtgaattctagcc 34365837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 9438323 - 9438371
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||| |||||||||||||||| || |||||    
T  9438323 ggacaatgcattattatatgcaggggttggggttcgaaccccggacacc 9438371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 19165372 - 19165411
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  19165372 ggacaatgcattattatatgcagaggttggggttcgaacc 19165411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 10377198 - 10377141
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| |||||||| || |||||    
T  10377198 ggacaatgcattattatatgcagaggccggggttcgaaccccgaacaccccacttatt 10377141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 22850840 - 22850888
Alignment:
Q  24 cattattatatgcagtggttggggttcgaacctcgaacacctcatttat 72  Q
    ||||||||||||||| |||||||||||||| | |||||||| |||||||    
T  22850840 cattattatatgcaggggttggggttcgaagcccgaacaccccatttat 22850888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 31949900 - 31949860
Alignment:
Q  15 tggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  31949900 tggacaatgcattattatatgcaggggtcggggttcgaacc 31949860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 18244086 - 18244047
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  18244086 ggacaatgcattattatatgcagaggtcggggttcgaacc 18244047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 26528590 - 26528645
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||| ||| ||||||| ||||||| ||||| || |||||    
T  26528590 acaatgcattattatatgcaggggtcggggttcaaacctcggacaccccacttatt 26528645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 32057055 - 32057094
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  32057055 ggacaatgcattattatatgcagtggtcgaggttcgaacc 32057094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 35190786 - 35190841
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||| ||| || ||||||||| |||||||| || |||||    
T  35190786 acaatgcattattatatgcaggggtcggagttcgaaccccgaacaccccacttatt 35190841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 10373618 - 10373664
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||| ||| |||||||||||| || |||||    
T  10373618 acaatgcattattatatgcaggggtcggggttcgaaccccggacacc 10373664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 25064738 - 25064704
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacc 55  Q
    |||||||||||||||||| ||||||||||||||||    
T  25064738 atgcattattatatgcaggggttggggttcgaacc 25064704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 2945617 - 2945674
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||||||||| |||||||||| ||| ||||||| ||||||| ||||| || |||||    
T  2945617 ggacaatgcattgttatatgcaggggtcggggttcaaacctcggacaccccacttatt 2945674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 5288419 - 5288362
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||| ||||| |||||  || |||||||| |||||    
T  5288419 ggacaatgcattattatatgcaggggtcggggtccgaactccggacacctcaattatt 5288362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 23771054 - 23771111
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||  || ||||| ||||||||    
T  23771054 ggacaatgcattattatatgcaggggaaggggttcgaactccggacaccccatttatt 23771111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 26878822 - 26878867
Alignment:
Q  17 gacaatgcattattatatgcagtggttggggttcgaacctcgaaca 62  Q
    |||||||||||||||||||||| ||||| |||||||| | ||||||    
T  26878822 gacaatgcattattatatgcaggggttgtggttcgaatcccgaaca 26878867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 1488114 - 1488166
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||| |||||||||| ||| |||||||||||| | |||||| ||||||||    
T  1488114 atgcattgttatatgcagaggtcggggttcgaaccccaaacaccccatttatt 1488166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 3448373 - 3448469
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 112  Q
    |||||||||||| ||||| |||| ||  |||||||||||| || ||||| || ||||| || |||||  ||| ||||||||| ||||| || |||||    
T  3448373 ggacaatgcattgttatacgcaggggccggggttcgaaccccggacaccccacttattcatcttataaggtgaattctagccaataggctacctgac 3448469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 7392563 - 7392607
Alignment:
Q  20 aatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||  ||||||| |||||||||| ||||||    
T  7392563 aatgcattattatatgcaaaggttgggattcgaacctcaaacacc 7392607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 9064887 - 9064951
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttatttta 80  Q
    ||||||||||||||||||||||| ||  |||||||||||| |  ||||| || ||||||| ||||    
T  9064887 ggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttatttacttta 9064951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 11520743 - 11520795
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||| |||||||||||||  |||||||||||  ||||||| |||||||||    
T  11520743 atgcattcttatatgcagtggccggggttcgaactccgaacacatcatttatt 11520795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 19374875 - 19374839
Alignment:
Q  27 tattatatgcagtggttggggttcgaacctcgaacac 63  Q
    |||||||||||| |||||||||||||||| |||||||    
T  19374875 tattatatgcaggggttggggttcgaaccccgaacac 19374839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 34792919 - 34792879
Alignment:
Q  15 tggacaatgcattattatatgcagtggttggggttcgaacc 55  Q
    |||||||||||||||||||||||| |||  |||||||||||    
T  34792919 tggacaatgcattattatatgcaggggtctgggttcgaacc 34792879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 8581 - 8629
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||    
T  8581 ggacaatgcattattatatgtaggggttggggttcgaaccccgaacacc 8629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 7097 - 7154
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| ||||||||    
T  7097 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccatttatt 7154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 12586 - 12643
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| |||  |||||||||||||| | ||| ||||||||    
T  12586 ggacaatgcattattatatgcaggggtcagggttcgaacctcggataccccatttatt 12643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 25047 - 25104
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| || ||||||||||||| || ||||| || |||||    
T  25047 ggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttatt 25104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 43770 - 43714
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||| || |||||    
T  43770 ggacaatgcattattatatgcag-gactggggttcgaacctcgaacaccccacttatt 43714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 21873 - 21927
Alignment:
Q  18 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    |||||| |||||||||||||| |||||||||||||||| |||||||| || |||||    
T  21873 acaatgtattattatatgcaggggttggggttcgaacc-cgaacaccccacttatt 21927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 915 - 952
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaa 53  Q
    ||||||||||||||||||||||| || |||||||||||    
T  915 ggacaatgcattattatatgcaggggctggggttcgaa 952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 47391 - 47354
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaa 53  Q
    ||||||||||||||||||||||| || |||||||||||    
T  47391 ggacaatgcattattatatgcaggggctggggttcgaa 47354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 16868 - 16915
Alignment:
Q  16 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 64  Q
    ||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  16868 ggacaatgcattattatatgcag-gggtcgggttcgaaccccgaacacc 16915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 19464 - 19412
Alignment:
Q  21 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 73  Q
    ||||||| ||||||| || |||||||| | |||||||| ||||||||||||||    
T  19464 atgcattgttatatgtaggggttggggattgaacctcggacacctcatttatt 19412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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