View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16678_low_1 (Length: 1201)

Name: NF16678_low_1
Description: NF16678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16678_low_1
NF16678_low_1
[»] chr4 (8 HSPs)
chr4 (10-1185)||(3765750-3766940)
chr4 (1041-1184)||(3780774-3780917)
chr4 (1041-1184)||(3776461-3776604)
chr4 (1046-1185)||(3755273-3755412)
chr4 (1041-1184)||(3762380-3762523)
chr4 (1068-1185)||(3751428-3751545)
chr4 (1047-1099)||(3745596-3745648)
chr4 (1076-1147)||(3770606-3770677)
[»] chr2 (4 HSPs)
chr2 (75-790)||(23847313-23848027)
chr2 (82-144)||(45091829-45091891)
chr2 (80-137)||(18429474-18429531)
chr2 (695-748)||(18430119-18430171)
[»] chr8 (5 HSPs)
chr8 (133-790)||(24448106-24448767)
chr8 (601-694)||(31264167-31264262)
chr8 (88-137)||(24448780-24448829)
chr8 (691-791)||(7419397-7419494)
chr8 (807-885)||(7419522-7419600)
[»] chr7 (5 HSPs)
chr7 (588-703)||(134185-134300)
chr7 (588-703)||(38597088-38597203)
chr7 (588-703)||(47798093-47798208)
chr7 (285-365)||(38596783-38596863)
chr7 (824-885)||(24758263-24758325)
[»] chr1 (5 HSPs)
chr1 (284-399)||(46174186-46174301)
chr1 (255-334)||(26522284-26522363)
chr1 (69-158)||(18748133-18748222)
chr1 (592-626)||(1852443-1852477)
chr1 (64-138)||(5366819-5366893)
[»] chr6 (6 HSPs)
chr6 (587-748)||(21589363-21589524)
chr6 (577-633)||(33519049-33519105)
chr6 (572-633)||(29298145-29298206)
chr6 (271-362)||(21589725-21589816)
chr6 (673-741)||(33519174-33519241)
chr6 (79-148)||(8591656-8591724)
[»] chr3 (5 HSPs)
chr3 (588-703)||(21082328-21082443)
chr3 (577-694)||(40155344-40155461)
chr3 (586-633)||(32639279-32639326)
chr3 (576-633)||(4471962-4472019)
chr3 (257-335)||(21081386-21081464)
[»] chr5 (6 HSPs)
chr5 (576-645)||(12017796-12017865)
chr5 (576-632)||(22583670-22583726)
chr5 (285-365)||(30704951-30705030)
chr5 (341-417)||(22583893-22583970)
chr5 (264-331)||(30052060-30052127)
chr5 (261-331)||(30658699-30658769)
[»] scaffold0707 (1 HSPs)
scaffold0707 (577-633)||(7593-7648)
[»] scaffold0050 (1 HSPs)
scaffold0050 (593-633)||(62628-62668)


Alignment Details
Target: chr4 (Bit Score: 938; Significance: 0; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 938; E-Value: 0
Query Start/End: Original strand, 10 - 1185
Target Start/End: Original strand, 3765750 - 3766940
Alignment:
Q  10 tgagatgaatcatttagggtggggcgagggaggcgatgcttgaatgtgacatatcatatgaggtaatgggcttgggaggaggagcaactgagggagtgta 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3765750 tgagatgaatcatttagggtggggcgagggaggcgatgcttgaatgtgaaatatcatatgaggtaatgggcttgggaggaggagcaactgagggagtgta 3765849  T
Q  110 atgctatgttaaattctattattttgcaggatgatgttattggcaggtgattctggaatttgcattcttcaaaaagaaaatattgtgagttcagcttaaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  3765850 atgctatgttaaattctattattttgcaggatgatgttattggcaggtgattctggagtttgcgttcttcaaaaagaaaatatggtgagttcagcttaaa 3765949  T
Q  210 cgtttttacatcaatcaatggttcaaaacaacattgcagtataatcttgttttttgacatcaagatgttcctcaaaaagtcaatctttttgtgtggcgtc 309  Q
    | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  3765950 cctttttacaacaatcaacggttcaaaacaacattgcagtataatcttgttttttgacatcaagatgttcctctaaaagtcaatc-ttttgtgtggcgtc 3766048  T
Q  310 tacttctcaactaccttccaacaaacaacaatttgttcaagagaggggtgattccgtaactgctcaatcttgtgtgggagggtgtggtaagttagaagac 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3766049 tacttctcaactaccttccaacaaacaacaatttgttcaagagaggggtgattccataactgctcaatcttgtgtgggagggtgtggtaagttagaagac 3766148  T
Q  410 gtggctc-aagnnnnnnnngcattgcgactattttcatcaagtctggatcgtggtttcttcatagctaggcttcgccttggtcactccttatcgtattta 508  Q
    | ||||| |          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  3766149 gcggctcgattttttttttgcattgcgactattttcatcaagtctggatcgtggtttcttcttagctaggcttcgtcatggtcactccttatcgtattta 3766248  T
Q  509 agaccacttaactcagttcggcggtgacttctctaaatacaaacaaggcattacccaattaatttttgttttcaacggtttgggttttatggaaagaaag 608  Q
    ||| |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3766249 agatcacttaactcagttcgacattgacttctctaaatacaaacaaggcattacccaattaatttttgttttcaacggtttgggttttatggaaagaaag 3766348  T
Q  609 aaatgcaagaatcttcaagaataaacataattctatcaaacagttgcttgacaaaattaaggtgcaatcctatggttggttgaaagcgaagcacatcaac 708  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3766349 aaatgcaataatcttcaagaataaacataattctatccaacaattgcttgacaaaattaaggtgcaatcctatggttggttgaaagcgaagcacatcaac 3766448  T
Q  709 tttgttttttaacaaccacatgtgatggctaaatcctcttttatatttgtgattgtcttctttactttcttgatgatgattt--------------tgta 794  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||              ||||    
T  3766449 tttgttttttaaccaccacatgtgatcgctaaatcctcttttatatttatgattgtcttctttgctttcttgatgatgatttttatcatattccgatgta 3766548  T
Q  795 gcaatacatttctctttgcttctcttaagcactccttatgcggataaagtaaagtcgtttggttatatgtaattccattttaccttcttaataagtg-nn 893  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  3766549 gcaatacatttctccttgcttctgttaagcactccttatgcggataaagtaaagtcgtttggttatatgtaattccattttaccttcttaataagtgttt 3766648  T
Q  894 nnnnnnncaccattaaactaataaattacatcataattcatttgatttcacatgatgcatgatttatttcacatgtgcatatagtagaattgactactaa 993  Q
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3766649 tttttttcaccattaaactaataaattacatcataattcatttgatttcatatgatgcatgatttatttcacatgtgcatatagtagaatcgactactaa 3766748  T
Q  994 aataaacataaacatgacttgaacaacaacaaacttattttttggacggaaaacaacaacaatagttaacaattaatagtgaaaaacatgaacattgtac 1093  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3766749 aataaacataaacataacttgaacaacaacaaacttattttttgaacagaaaacaacaacaatagttaacaattaatagtgaaaaacatgaacattgtac 3766848  T
Q  1094 tcaacacaagcatcctcagatttgaaatcaatcgaatgagtattagcttcagcataacctctagcaaatctgaaaactccactaccaccaat 1185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3766849 tcaacacaagcatcctcagatttgaaatcaatcgaatgagtattagcttcagcataacctctagcaaatctgaaaactccactaccaccaat 3766940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 1041 - 1184
Target Start/End: Original strand, 3780774 - 3780917
Alignment:
Q  1041 ggaaaacaacaacaatagttaacaattaatagtgaaaaacatgaacattgtactcaacacaagcatcctcagatttgaaatcaatcgaatgagtattagc 1140  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  3780774 ggaaaacaacaacaataatcaacaatcaatagtgaaaaacatgaacattgtactcaacacaagcatccccagttttgaaatcaatccaatgagtattagc 3780873  T
Q  1141 ttcagcataacctctagcaaatctgaaaactccactaccaccaa 1184  Q
    || |||||| ||||||||||||||||||| ||||||||||||||    
T  3780874 ttgagcatatcctctagcaaatctgaaaagtccactaccaccaa 3780917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 1041 - 1184
Target Start/End: Original strand, 3776461 - 3776604
Alignment:
Q  1041 ggaaaacaacaacaatagttaacaattaatagtgaaaaacatgaacattgtactcaacacaagcatcctcagatttgaaatcaatcgaatgagtattagc 1140  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| ||||  ||||||| |||||||| ||||    
T  3776461 ggaaaacaacaacaataattaacaatcaatagtgaaaaacgtgaacattgtactcaacacaagcatccccagctttggcatcaatccaatgagtagtagc 3776560  T
Q  1141 ttcagcataacctctagcaaatctgaaaactccactaccaccaa 1184  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  3776561 ttcagcataacctctagcaaatctgaaaagtccactaccaccaa 3776604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 1046 - 1185
Target Start/End: Original strand, 3755273 - 3755412
Alignment:
Q  1046 acaacaacaatagttaacaattaatagtgaaaaacatgaacattgtactcaacacaagcatcctcagatttgaaatcaatcgaatgagtattagcttcag 1145  Q
    |||||||||||| |||||||| ||||||||||||||| |||||| |||||||||  ||||||| ||||||||| ||||| | ||||||||||||||||||    
T  3755273 acaacaacaataattaacaatcaatagtgaaaaacataaacattatactcaacaatagcatccccagatttgatatcaaaccaatgagtattagcttcag 3755372  T
Q  1146 cataacctctagcaaatctgaaaactccactaccaccaat 1185  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  3755373 cataacctctagcaaatctgaaaaatccactaccaccaat 3755412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 1041 - 1184
Target Start/End: Original strand, 3762380 - 3762523
Alignment:
Q  1041 ggaaaacaacaacaatagttaacaattaatagtgaaaaacatgaacattgtactcaacacaagcatcctcagatttgaaatcaatcgaatgagtattagc 1140  Q
    ||||||||||||||| | |||||||| |||| ||||||||||||| ||||||||||| ||| |||||| ||||||||| ||||| | |||||||| ||||    
T  3762380 ggaaaacaacaacaaaaattaacaatcaataatgaaaaacatgaagattgtactcaatacatgcatccccagatttgagatcaacccaatgagtagtagc 3762479  T
Q  1141 ttcagcataacctctagcaaatctgaaaactccactaccaccaa 1184  Q
    || |||||| ||||||||||||||||||| |||||| |||||||    
T  3762480 ttgagcatatcctctagcaaatctgaaaagtccactgccaccaa 3762523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1068 - 1185
Target Start/End: Original strand, 3751428 - 3751545
Alignment:
Q  1068 aatagtgaaaaacatgaacattgtactcaacacaagcatcctcagatttgaaatcaatcgaatgagtattagcttcagcataacctctagcaaatctgaa 1167  Q
    ||||||||||||||| ||||||||||||||||  ||||||  ||| ||||| ||||| | |||||||| |||||| |||||| |||||||||||||||||    
T  3751428 aatagtgaaaaacataaacattgtactcaacaatagcatctccagttttgagatcaaaccaatgagtagtagctttagcatatcctctagcaaatctgaa 3751527  T
Q  1168 aactccactaccaccaat 1185  Q
    || |||||||||||||||    
T  3751528 aagtccactaccaccaat 3751545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1047 - 1099
Target Start/End: Original strand, 3745596 - 3745648
Alignment:
Q  1047 caacaacaatagttaacaattaatagtgaaaaacatgaacattgtactcaaca 1099  Q
    ||||||||||| |||||||| |||||| |||||||| ||||||||||||||||    
T  3745596 caacaacaataattaacaatcaatagtaaaaaacataaacattgtactcaaca 3745648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1076 - 1147
Target Start/End: Original strand, 3770606 - 3770677
Alignment:
Q  1076 aaaacatgaacattgtactcaacacaagcatcctcagatttgaaatcaatcgaatgagtattagcttcagca 1147  Q
    ||||||| |||||| ||||| |||  ||||||| ||||||||| ||||| | ||||||||||||||||||||    
T  3770606 aaaacataaacattatactcgacaacagcatccccagatttgatatcaaaccaatgagtattagcttcagca 3770677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 2e-74; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 2e-74
Query Start/End: Original strand, 75 - 790
Target Start/End: Original strand, 23847313 - 23848027
Alignment:
Q  75 atgggcttgggaggaggagcaactgagggagtgtaatgctatgttaaattctattattttgcaggatgatgtta-ttggcaggtgattctggaatttgca 173  Q
    ||||| || |||||||||| | ||||||||||||  |||| || | |||| || ||||||| | |||||| ||| ||| || ||| || |||| |||||     
T  23847313 atgggttttggaggaggagtagctgagggagtgttgtgctctgctgaattataatattttgtatgatgatattaattgacatgtggttgtggagtttgcg 23847412  T
Q  174 ttcttcaaaaagaaaatattgtgagttcagctta-aacgttttt-acatcaatcaatggttcaaaacaacattgca---gtataatcttgttttttgaca 268  Q
    |||||||| || || ||||||| |||||  |||| ||| ||||| ||| |||||||   |||||||||||||||||   || ||  ||||| ||||| ||    
T  23847413 ttcttcaacaa-aatatattgtcagttcgacttacaactttttttacaacaatcaacaattcaaaacaacattgcaaatgtttac-cttgtattttggca 23847510  T
Q  269 tcaagatgttcctcaaaaagtcaatctttttgtgtggcgtctacttctcaactaccttccaacaaacaacaatttgttcaagagaggggtgattccgta- 367  Q
    ||||||||||||||  |||||||||||||||||||| || || || ||||||   |||||||||||   |||||| |  ||||||||||||||||||       
T  23847511 tcaagatgttcctctcaaagtcaatctttttgtgtgacgcctcctactcaaccggcttccaacaaagggcaatttat--aagagaggggtgattccggct 23847608  T
Q  368 actgctcaatcttgtgtgggagggtgtggtaagttagaagacgtggctcaagnnnnnnnngcattgcgactattttcatcaagtctggatcgtggtttct 467  Q
    |||| ||||||||||||| ||||||||||||| || | ||| | || |||           |||||||||||||||  |||||| ||| |||| |||| |    
T  23847609 actgttcaatcttgtgtgagagggtgtggtaattttgtagatgcggttca--tcttttcttcattgcgactatttttgtcaagtttgggtcgttgtttat 23847706  T
Q  468 tcatagctaggcttcgccttggtcactccttatcgtatttaagaccacttaactcagttcggcggtgacttctctaaatacaaacaaggcattacccaat 567  Q
     |   | ||||||||| | |||||||| | ||| |||||| | |  |||||||||| ||||||||||  |||||||||||||||   ||||||| ||| |    
T  23847707 gctcggttaggcttcgtcatggtcacttcgtattgtatttcaaattacttaactcaattcggcggtggtttctctaaatacaaatgtggcattatccatt 23847806  T
Q  568 taatttttgttttcaacggtttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaacataattctatcaaacagttgcttgacaaaatta 667  Q
    ||||||  ||||||||  |||||||| ||||||||||||| |||||||| ||| ||||||||||||||| |||||||| | || || |||||||||||||    
T  23847807 taatttg-gttttcaaaagtttgggtattatggaaagaaaaaaatgcaataattttcaagaataaacatcattctatccaccactttcttgacaaaatta 23847905  T
Q  668 aggtgcaatcctatggttggttgaaagcgaagcacatcaactttgttttttaacaaccacatgtgatggctaaatcctcttttatatttgtgattgtctt 767  Q
    || ||||||||||||| ||||||| |||||| |||||||| ||||  ||||||| |||| ||||| ||||||||||||||||||| ||||||| ||| ||    
T  23847906 agatgcaatcctatggatggttgagagcgaaacacatcaattttg-cttttaactaccatatgtggtggctaaatcctcttttatgtttgtgactgtttt 23848004  T
Q  768 ctttactttcttgatgatgattt 790  Q
    ||| ||||| ||| || ||||||    
T  23848005 cttcactttattgttggtgattt 23848027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 45091829 - 45091891
Alignment:
Q  82 tgggaggaggagcaactgagggagtgtaatgctatg-ttaaattctattattttgcaggatgat 144  Q
    |||||||||||||| ||||||||||||| ||| ||| || ||||| ||||||||||||||||||    
T  45091829 tgggaggaggagcagctgagggagtgtagtgc-atgtttgaattcaattattttgcaggatgat 45091891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 18429474 - 18429531
Alignment:
Q  80 cttgggaggaggagcaactgagggagtgtaatgctatgttaaattctattattttgca 137  Q
    ||||||||||||||||||||||  |||||| |||| |||| || | ||||||||||||    
T  18429474 cttgggaggaggagcaactgagaaagtgtagtgctctgttgaactttattattttgca 18429531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 695 - 748
Target Start/End: Original strand, 18430119 - 18430171
Alignment:
Q  695 cgaagcacatcaactttgttttttaacaaccacatgtgatggctaaatcctctt 748  Q
    |||| |||||||||||||||||| | | ||||||||||||| ||||||||||||    
T  18430119 cgaaacacatcaactttgtttttga-ctaccacatgtgatgactaaatcctctt 18430171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 5e-62; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 133 - 790
Target Start/End: Complemental strand, 24448767 - 24448106
Alignment:
Q  133 ttgcaggatgatgttattggcaggtgattctggaatttgcattcttcaaaaaga-aaatattgtgagttcagctta-aacgtttttacatcaatcaatgg 230  Q
    ||||| |||||||||||||  ||||  || |||| ||||||||||||||||| | ||| ||||| ||||| ||||| ||  ||||| ||  ||||||       
T  24448767 ttgcaagatgatgttattgataggtagttgtggagtttgcattcttcaaaaaaataaaaattgttagttcggcttacaatttttttgcaataatcaacaa 24448668  T
Q  231 ttcaaaacaacattgcagt--ataatcttgttttttgacatcaagatgttcctcaaaaagtcaatct---ttttgtgtggcgtctacttctcaactacct 325  Q
    ||||||||||||| | ||   ||||  |||| |||||||||||| |||||| || | |||||||| |   ||||||||||||||| |||||||||| |||    
T  24448667 ttcaaaacaacatcgtagatgataactttgtattttgacatcaaaatgttcatctagaagtcaatttattttttgtgtggcgtctccttctcaactgcct 24448568  T
Q  326 tccaacaaacaacaatttgttcaagagaggggtgattccgta-actgctcaatcttgtgtgggagggtgtggtaagttagaagacgtggctcaagnnnnn 424  Q
    |||||||||  ||||||| ||||||||| |||||||| ||   ||| ||| ||||| |||||||| ||||| ||| ||||| | |  ||||||           
T  24448567 tccaacaaatgacaatttattcaagagacgggtgatttcggctacttctccatcttatgtgggagcgtgtgttaatttagatgccacggctca--ttttt 24448470  T
Q  425 nnngcattgcgactattttcatcaagtctggatcgtggtttcttcatagctaggcttcgccttggtcactccttatcgtatttaagaccacttaactcag 524  Q
        |||  |||||||||||||||||| ||  |||| |||| |   | | ||||||||| | |||||||| |  ||||||||| ||| | ||||| |||     
T  24448469 tcttcatcacgactattttcatcaagtttgagtcgttgtttatgtttggttaggcttcgtcatggtcacttcgcatcgtatttcagatcgcttaattcaa 24448370  T
Q  525 ttcggcggtgacttctctaaatacaaacaaggcattacccaattaatttttgttttcaacggtttgggttttatggaaagaaagaaatgcaagaatcttc 624  Q
    |||||||  ||||||||||||||||||   ||||||| || ||| ||||  ||||||| ||||||| || ||||| ||||||||||||||||||||||||    
T  24448369 ttcggcgacgacttctctaaatacaaatgtggcattatcctatttatttg-gttttcatcggtttgtgtattatgaaaagaaagaaatgcaagaatcttc 24448271  T
Q  625 aagaataaacataattctatcaaacagttgcttgacaaaattaaggtgcaatcctatggttggttgaaagcgaagcacatcaactttgttttttaacaac 724  Q
    ||||||||| ||||||||||| | || ||  |||||||||||||| ||||||| | ||  |||||||||||||| |||||||| |||   ||||||| |     
T  24448270 aagaataaatataattctatccagcacttatttgacaaaattaagatgcaatcatgtgaatggttgaaagcgaaacacatcaa-ttttacttttaactat 24448172  T
Q  725 cacatgtgatggctaaatcctcttttatatttgtgattgtcttctttactttcttgatgatgattt 790  Q
    ||||| || ||  ||||||||||||||||||||||| |||  |||||||||||||| || ||||||    
T  24448171 cacatatggtgaataaatcctcttttatatttgtgaatgttctctttactttcttgttggtgattt 24448106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 601 - 694
Target Start/End: Complemental strand, 31264262 - 31264167
Alignment:
Q  601 aaagaaagaaatgcaagaatcttcaagaataaacataattctatcaaacagttgcttgacaaaattaaggt--gcaatcctatggttggttgaaag 694  Q
    |||||||  ||||||| ||||||||| ||||||| | |||||||| | || ||||||||||||||||||||  |||||||||||||| ||||||||    
T  31264262 aaagaaatgaatgcaaaaatcttcaacaataaacgtgattctatccaccacttgcttgacaaaattaaggtgcgcaatcctatggtttgttgaaag 31264167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 24448829 - 24448780
Alignment:
Q  88 gaggagcaactgagggagtgtaatgctatgttaaattctattattttgca 137  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  24448829 gaggagcatctgagggagtgtagtgctatgttgaattctattattttgca 24448780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 691 - 791
Target Start/End: Original strand, 7419397 - 7419494
Alignment:
Q  691 aaagcgaagcacatcaactttgttttttaacaaccacatgtgatggctaaatcctcttttatatttgtgattgtcttctttactttcttgatgatgattt 790  Q
    |||||||| | ||||||||||| |||| ||| |||| ||||| ||||| |||| |||||||| ||||||||||| |||||| |||||||| || ||||||    
T  7419397 aaagcgaaactcatcaactttgctttt-aactaccaaatgtggtggctcaatc-tcttttatgtttgtgattgt-ttctttgctttcttgttggtgattt 7419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 807 - 885
Target Start/End: Original strand, 7419522 - 7419600
Alignment:
Q  807 tctttgcttctcttaagcactccttatgcggataaagtaaagtcgtttggttatatgtaattccattttaccttcttaa 885  Q
    |||||| ||||||  |||||||||| |||  | ||||||||||| ||| |||||||||||||| ||| || ||||||||    
T  7419522 tctttgtttctctctagcactccttgtgcaaagaaagtaaagtcatttagttatatgtaattctattatagcttcttaa 7419600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 1e-22; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 588 - 703
Target Start/End: Original strand, 134185 - 134300
Alignment:
Q  588 ttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaacataattctatcaaacagttgcttgacaaaattaaggtgcaatcctatggttgg 687  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | ||||| ||||  | || ||||||||||| |||||||  ||||  | |||||||    
T  134185 ttgggtcttatggaaagaaagaaatgcaagaatcttcaagaattcaaataatactattcaccacttgcttgacaacattaaggctcaatattttggttgg 134284  T
Q  688 ttgaaagcgaagcaca 703  Q
    ||||||||||||||||    
T  134285 ttgaaagcgaagcaca 134300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 588 - 703
Target Start/End: Original strand, 38597088 - 38597203
Alignment:
Q  588 ttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaacataattctatcaaacagttgcttgacaaaattaaggtgcaatcctatggttgg 687  Q
    |||||| |||||||||||||||||||| || ||||||||||||  |  |||| ||||  | || ||||||||||| |||||||  ||||| | |||||||    
T  38597088 ttgggtcttatggaaagaaagaaatgctaggatcttcaagaattcaagtaatactattcaccacttgcttgacaacattaaggctcaatcttttggttgg 38597187  T
Q  688 ttgaaagcgaagcaca 703  Q
    ||||||||||||||||    
T  38597188 ttgaaagcgaagcaca 38597203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 588 - 703
Target Start/End: Complemental strand, 47798208 - 47798093
Alignment:
Q  588 ttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaacataattctatcaaacagttgcttgacaaaattaaggtgcaatcctatggttgg 687  Q
    ||||||||||||||||||||||||||||| || ||||||||||  ||| ||| ||||  | || ||||||||||| |||||||  |||||  || |||||    
T  47798208 ttgggttttatggaaagaaagaaatgcaaaaagcttcaagaattcacaaaatactattcatcaattgcttgacaatattaaggctcaatctaatagttgg 47798109  T
Q  688 ttgaaagcgaagcaca 703  Q
    |||||| | |||||||    
T  47798108 ttgaaaacaaagcaca 47798093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 38596783 - 38596863
Alignment:
Q  285 aaagtcaatctttttgtgtggcgtctacttctcaactaccttccaacaaacaacaatttgttcaagagaggggtgattccg 365  Q
    |||||||||||||| |||||||| || |||||||||  | | ||||||||  |||||||| | |||||||||||| |||||    
T  38596783 aaagtcaatcttttcgtgtggcgccttcttctcaaccgcttaccaacaaatgacaatttggtaaagagaggggtgcttccg 38596863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 824 - 885
Target Start/End: Complemental strand, 24758325 - 24758263
Alignment:
Q  824 cactccttatgcggataaagtaaagtcgtttggtt-atatgtaattccattttaccttcttaa 885  Q
    |||||||| |||||| || ||||||||||||| || |||| |||||| |||||||||||||||    
T  24758325 cactccttgtgcggagaaggtaaagtcgtttgcttaatatataattctattttaccttcttaa 24758263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 2e-18; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 46174186 - 46174301
Alignment:
Q  284 aaaagtcaatctttttgtgtggcgtctacttctcaactaccttccaacaaacaacaatttgttcaagagaggggtgattcc-gtaactgctcaatcttgt 382  Q
    |||| |||||||||||||||| ||||| |||||||||  ||||||||||||  | |||||||||||  ||||||||||||| |  ||| |||||||||||    
T  46174186 aaaaatcaatctttttgtgtgacgtcttcttctcaaccgccttccaacaaaagataatttgttcaaatgaggggtgattccagctacttctcaatcttgt 46174285  T
Q  383 gtgggagggtgtggtaa 399  Q
    || ||||||||||||||    
T  46174286 gt-ggagggtgtggtaa 46174301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 334
Target Start/End: Original strand, 26522284 - 26522363
Alignment:
Q  255 cttgttttttgacatcaagatgttcctcaaaaagtcaatctttttgtgtggcgtctacttctcaactaccttccaacaaa 334  Q
    ||||||||||| |||||||||||||||| |||||| |||| ||| ||||| | ||||||||||||| | |||||||||||    
T  26522284 cttgttttttggcatcaagatgttcctctaaaagttaatcctttcgtgtgacatctacttctcaaccatcttccaacaaa 26522363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 18748222 - 18748133
Alignment:
Q  69 gaggtaatgggcttgggaggaggagcaactgagggagtgtaatgctatgttaaattctattattttgcaggatgatgttattggcaggtg 158  Q
    ||||| |||||| |||||||||||| | ||||||||| |||  | |||||| ||  |||||||||||||||||||||||| || ||||||    
T  18748222 gaggttatgggcgtgggaggaggagtagctgagggagagtagcgatatgttgaacactattattttgcaggatgatgttaatgacaggtg 18748133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 592 - 626
Target Start/End: Original strand, 1852443 - 1852477
Alignment:
Q  592 gttttatggaaagaaagaaatgcaagaatcttcaa 626  Q
    |||||||| ||||||||||||||||||||||||||    
T  1852443 gttttatgaaaagaaagaaatgcaagaatcttcaa 1852477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 5366893 - 5366819
Alignment:
Q  64 catatgaggtaatgggcttgggaggaggagcaactgagggagtgtaatgctatgttaaattctattattttgcag 138  Q
    |||| ||||| |||||| |||  |||||||||  |||||||||||| || |||||| || |||||||||||||||    
T  5366893 cataagaggttatgggcgtggatggaggagcagttgagggagtgtagtgatatgttgaactctattattttgcag 5366819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 3e-17; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 587 - 748
Target Start/End: Complemental strand, 21589524 - 21589363
Alignment:
Q  587 tttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaacataattctatcaaacagttgcttgacaaaat-taaggtgcaatcctatggtt 685  Q
    ||||||| |||||||||||||||||| || ||||||||||||||||| |||||  |||| | || ||||||||||| ||  || |||||||| |||||||    
T  21589524 tttgggtcttatggaaagaaagaaattcaggaatcttcaagaataaaaataataatatctaccacttgcttgacaacataaaaagtgcaatcttatggtt 21589425  T
Q  686 ggttgaaagcgaagcacatcaactttgttttttaacaaccacatgtgatggctaaatcctctt 748  Q
    || ||||| | || |||| |||||| |  |||| || |||| ||||| |||||||| ||||||    
T  21589424 ggctgaaaacaaaacacaacaacttcg-cttttgactaccatatgtggtggctaaagcctctt 21589363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 577 - 633
Target Start/End: Original strand, 33519049 - 33519105
Alignment:
Q  577 ttttcaacggtttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaa 633  Q
    ||||| || |||||||||||||||||||||||||||| || ||||||||||||||||    
T  33519049 ttttctaccgtttgggttttatggaaagaaagaaatgtaaaaatcttcaagaataaa 33519105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 572 - 633
Target Start/End: Complemental strand, 29298206 - 29298145
Alignment:
Q  572 ttttgttttcaacggtttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaa 633  Q
    |||||||||| ||  ||||||| |||||||||||||||||| |||||||| |||||||||||    
T  29298206 ttttgttttctacaatttgggtcttatggaaagaaagaaattcaagaatcgtcaagaataaa 29298145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 362
Target Start/End: Complemental strand, 21589816 - 21589725
Alignment:
Q  271 aagatgttcctcaaaaagtcaatctttttgtgtggcgtctacttctcaactaccttccaacaaacaacaatttgttcaagagaggggtgatt 362  Q
    |||||||| ||  |||||||||||||||||||| || ||| ||||||| |  ||||||||| ||  ||||||| |||||| |||||||||||    
T  21589816 aagatgtttcttcaaaagtcaatctttttgtgtagcatctccttctcatccgccttccaacgaaagacaattttttcaagcgaggggtgatt 21589725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 673 - 741
Target Start/End: Original strand, 33519174 - 33519241
Alignment:
Q  673 caatcctatggttggttgaaagcgaagcacatcaactttgttttttaacaaccacatgtgatggctaaa 741  Q
    ||||| ||||| || ||||||||||| |||||||||||||  ||||||| |||||||||| ||||||||    
T  33519174 caatcttatggctgattgaaagcgaaacacatcaactttg-cttttaactaccacatgtggtggctaaa 33519241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 8591724 - 8591656
Alignment:
Q  79 gcttgggaggaggagcaactgagggagtgtaatgctatgttaaattctattattttgcaggatgatgtta 148  Q
    |||||||||||||| ||||| ||||| |||| ||||  ||| ||||||||| ||||||| ||||||||||    
T  8591724 gcttgggaggaggatcaactaagggattgtagtgctccgttgaattctatt-ttttgcaagatgatgtta 8591656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 588 - 703
Target Start/End: Original strand, 21082328 - 21082443
Alignment:
Q  588 ttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaacataattctatcaaacagttgcttgacaaaattaaggtgcaatcctatggttgg 687  Q
    |||||||||||||||||||||||||||||||||||||||||||   || |||  |||  | || ||||||||||| |  ||||  ||||| | |||||||    
T  21082328 ttgggttttatggaaagaaagaaatgcaagaatcttcaagaattctcaaaatattattcaccacttgcttgacaacaacaaggctcaatcttttggttgg 21082427  T
Q  688 ttgaaagcgaagcaca 703  Q
    ||||||||||| ||||    
T  21082428 ttgaaagcgaaacaca 21082443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 577 - 694
Target Start/End: Complemental strand, 40155461 - 40155344
Alignment:
Q  577 ttttcaacggtttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaacataattctatcaaacagttgcttgacaaaattaaggtgcaat 676  Q
    ||||| || ||||||||  |||||||||||||| ||||||||||||||||||||||| || ||  |||| | || ||||| ||||| || || | |||||    
T  40155461 ttttctacagtttgggtgctatggaaagaaagatatgcaagaatcttcaagaataaaaatgataatatccaccacttgctcgacaacataaaagcgcaat 40155362  T
Q  677 cctatggttggttgaaag 694  Q
    | | || |||||||||||    
T  40155361 cttttgattggttgaaag 40155344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 586 - 633
Target Start/End: Complemental strand, 32639326 - 32639279
Alignment:
Q  586 gtttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaa 633  Q
    |||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  32639326 gtttgggtcttatggaaagaaagaaatgcaagcatcttcaagcataaa 32639279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 576 - 633
Target Start/End: Complemental strand, 4472019 - 4471962
Alignment:
Q  576 gttttcaacggtttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaa 633  Q
    |||||| || |||||||| ||||||||||||||||||||| ||| ||||||| |||||    
T  4472019 gttttctacagtttgggtgttatggaaagaaagaaatgcatgaaccttcaagcataaa 4471962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 335
Target Start/End: Original strand, 21081386 - 21081464
Alignment:
Q  257 tgttttttgacatcaagatgttcctcaaaaagtcaatctttttgtgtggcgtctacttctcaactaccttccaacaaac 335  Q
    |||||||||  || ||||||| ||||  || || |||||||||||||||||||| |||||||||   ||||||||||||    
T  21081386 tgttttttggaataaagatgtccctcccaaggttaatctttttgtgtggcgtctccttctcaaccgtcttccaacaaac 21081464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000007; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 576 - 645
Target Start/End: Complemental strand, 12017865 - 12017796
Alignment:
Q  576 gttttcaacggtttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaacataattctatc 645  Q
    ||||||| ||||||| || |||| || ||||||||||||||||||||| ||||||||| || ||||||||    
T  12017865 gttttcatcggtttgagtgttattgagagaaagaaatgcaagaatcttgaagaataaatatgattctatc 12017796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 576 - 632
Target Start/End: Complemental strand, 22583726 - 22583670
Alignment:
Q  576 gttttcaacggtttgggttttatggaaagaaagaaatgcaagaatcttcaagaataa 632  Q
    ||||||||| ||||||||  | |||||||||| ||||||||||||||||||||||||    
T  22583726 gttttcaacagtttgggtcatgtggaaagaaataaatgcaagaatcttcaagaataa 22583670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 30704951 - 30705030
Alignment:
Q  285 aaagtcaatctttttgtgtggcgtctacttctcaactaccttccaacaaacaacaatttgttcaagagaggggtgattccg 365  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||||||||  ||||||| || | |||||| |||||||||    
T  30704951 aaagtcaatctttttgtgtg-cgtcttcttctcaaccgccttccaacaaatgacaatttatttatgagaggagtgattccg 30705030  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 417
Target Start/End: Complemental strand, 22583970 - 22583893
Alignment:
Q  341 tttgttcaagagaggggtgattccgta-actgctcaatcttgtgtgggagggtgtggtaagttagaagacgtggctca 417  Q
    |||||| ||||||||||||||||||   ||| ||||||||||||||||| ||||||||||  ||||||| || |||||    
T  22583970 tttgttaaagagaggggtgattccggctacttctcaatcttgtgtgggatggtgtggtaatctagaagatgtagctca 22583893  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 30052127 - 30052060
Alignment:
Q  264 tgacatcaagatgttcctcaaaaagtcaatctttttgtgtggcgtctacttctcaactaccttccaac 331  Q
    |||||| ||||||||||||   || ||||||||||| |||||||||| |||||||||  |||||||||    
T  30052127 tgacataaagatgttcctctgcaaatcaatctttttatgtggcgtcttcttctcaaccgccttccaac 30052060  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 30658699 - 30658769
Alignment:
Q  261 ttttgacatcaagatgttcctcaaaaagtcaatctttttgtgtggcgtctacttctcaactaccttccaac 331  Q
    ||||||||| |||||||||||   ||||||||| ||||| |||||||||| ||| |||||  |||||||||    
T  30658699 ttttgacataaagatgttcctttgaaagtcaatttttttatgtggcgtcttcttttcaaccgccttccaac 30658769  T

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Target: scaffold0707 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 577 - 633
Target Start/End: Original strand, 7593 - 7648
Alignment:
Q  577 ttttcaacggtttgggttttatggaaagaaagaaatgcaagaatcttcaagaataaa 633  Q
    ||||| || ||||||||||||||||||| |||||||| || ||||||||||||||||    
T  7593 ttttctaccgtttgggttttatggaaag-aagaaatgtaaaaatcttcaagaataaa 7648  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 593 - 633
Target Start/End: Complemental strand, 62668 - 62628
Alignment:
Q  593 ttttatggaaagaaagaaatgcaagaatcttcaagaataaa 633  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  62668 ttttatggaaagaaagaaatgttagaatcttcaagaataaa 62628  T

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