View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16678_low_4 (Length: 682)

Name: NF16678_low_4
Description: NF16678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16678_low_4
NF16678_low_4
[»] chr8 (6 HSPs)
chr8 (1-538)||(9773823-9774346)
chr8 (282-364)||(1607652-1607734)
chr8 (247-392)||(29336918-29337062)
chr8 (1-84)||(2268555-2268636)
chr8 (2-82)||(21693141-21693219)
chr8 (2-82)||(5064204-5064282)
[»] chr6 (9 HSPs)
chr6 (4-669)||(20382776-20383448)
chr6 (25-669)||(14759177-14759808)
chr6 (266-398)||(9948955-9949087)
chr6 (276-351)||(11015461-11015536)
chr6 (282-365)||(25541463-25541546)
chr6 (285-399)||(18750400-18750513)
chr6 (1-72)||(1051157-1051227)
chr6 (282-365)||(26604705-26604788)
chr6 (275-393)||(22870491-22870609)
[»] chr4 (6 HSPs)
chr4 (1-461)||(28588709-28589163)
chr4 (284-365)||(6640344-6640425)
chr4 (1-85)||(8847792-8847874)
chr4 (285-365)||(8895231-8895311)
chr4 (252-337)||(52183076-52183160)
chr4 (285-365)||(12097377-12097457)
[»] chr2 (7 HSPs)
chr2 (1-466)||(13497614-13498076)
chr2 (198-398)||(16428586-16428784)
chr2 (608-669)||(13498198-13498259)
chr2 (275-348)||(24852924-24852997)
chr2 (310-393)||(11909803-11909886)
chr2 (305-352)||(13031696-13031743)
chr2 (252-348)||(37439431-37439526)
[»] chr5 (8 HSPs)
chr5 (1-480)||(17346217-17346688)
chr5 (247-398)||(37335372-37335522)
chr5 (228-366)||(40153555-40153693)
chr5 (252-365)||(34738369-34738481)
chr5 (268-366)||(14515222-14515320)
chr5 (488-661)||(17346710-17346883)
chr5 (6-70)||(42747073-42747135)
chr5 (247-347)||(42747310-42747409)
[»] chr3 (10 HSPs)
chr3 (1-415)||(23430890-23431297)
chr3 (75-480)||(23391317-23391710)
chr3 (282-365)||(17404834-17404917)
chr3 (229-348)||(31095625-31095743)
chr3 (591-639)||(6817161-6817209)
chr3 (1-72)||(4501055-4501124)
chr3 (282-348)||(17735602-17735668)
chr3 (282-348)||(19036871-19036937)
chr3 (275-336)||(461339-461400)
chr3 (252-348)||(24705040-24705135)
[»] chr7 (5 HSPs)
chr7 (204-415)||(2784864-2785071)
chr7 (12-164)||(2769083-2769234)
chr7 (338-415)||(2758882-2758959)
chr7 (1-85)||(27954017-27954099)
chr7 (1-85)||(29865135-29865217)
[»] chr1 (8 HSPs)
chr1 (234-398)||(7063516-7063680)
chr1 (247-393)||(13248942-13249087)
chr1 (285-366)||(43102361-43102442)
chr1 (282-365)||(39456653-39456736)
chr1 (1-85)||(19329311-19329392)
chr1 (46-91)||(45620344-45620388)
chr1 (275-347)||(6847808-6847880)
chr1 (245-393)||(31473481-31473628)
[»] scaffold0426 (1 HSPs)
scaffold0426 (177-398)||(2192-2404)
[»] scaffold0059 (2 HSPs)
scaffold0059 (1-156)||(5559-5711)
scaffold0059 (268-345)||(5819-5896)
[»] scaffold0013 (2 HSPs)
scaffold0013 (1-74)||(239770-239842)
scaffold0013 (282-352)||(239497-239567)
[»] scaffold0458 (1 HSPs)
scaffold0458 (282-365)||(6981-7064)


Alignment Details
Target: chr8 (Bit Score: 380; Significance: 0; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 1 - 538
Target Start/End: Original strand, 9773823 - 9774346
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttctatgttaagggtttgta 100  Q
    ||||||||||||||||||||||| |||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9773823 gtatcaaaagtaagtatgttttagtatcgtttccacaaggattagtgcgatattcgtaagccattcaacaattgttatcgttctatgttaagggtttgta 9773922  T
Q  101 aaatggtttgttttgaaaacctaatcgggctataatgcagtaaataaaactgagttaaacagaggattaaaactaatgggattagacaattcattaacca 200  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    ||| ||||||||||||||||||    
T  9773923 aaatggtttgtttcgaaaacctaatcggactataatgcagtaaataaaactgagttaaacagaggattaaaactgccaggagtagacaattcattaacca 9774022  T
Q  201 aacgtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtc 300  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |     
T  9774023 aacgtcgcatatattctcttgatcaagcatatagattctagctatcaatcaatattatcacgtatcactcgacaaacatcgtttatgtctaaataatatt 9774122  T
Q  301 gtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaaatt 400  Q
    || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  9774123 gtaagttcaatcatattgtttagtcgacgatttttcagcctattaaacaatacaatagcattaagactt-atacttgaagtggttataaaaacctaaatt 9774221  T
Q  401 cacttctagtatttaattagggtttaatagatgtttatcctatatctagattcaaaaagtatttctaataacaaatcaaacatacataacaaggataaca 500  Q
    || |||||||||    ||||||||||||| |||||       |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  9774222 catttctagtat----ttagggtttaataaatgtt-------tatctagattcaaaaagtatttttaataacaaatcaaacatacataagaaggataaca 9774310  T
Q  501 tcaatattaaaggacaactagaatcatgatatattact 538  Q
    |||  |||||||||||||||||||||||||||||||||    
T  9774311 tca--attaaaggacaactagaatcatgatatattact 9774346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 1607734 - 1607652
Alignment:
Q  282 tttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaa 364  Q
    |||||||||||||||  || |||||||||||| || ||||| |||||||| |||||  ||||||||| |||||||||||||||    
T  1607734 tttatgtctaaataacttcatgagttcaatcgaatcgtttaatcgacgatgtctcaatctattaaacgatacaatagcattaa 1607652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 392
Target Start/End: Complemental strand, 29337062 - 29336918
Alignment:
Q  247 aatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaa 346  Q
    |||| ||||||||||||| ||| |||||| |||| ||  ||||||||| || | |||| ||| ||||||||||||| |||||||||||| |  |||||||    
T  29337062 aatcgatattatcacgtatcacccgacaa-catcattcgtgtctaaatgatattgtgacttcgatcgtattgtttaatcgacgatttctaaatctattaa 29336964  T
Q  347 acaatacaatagcattaagacttgatacttgaagtggttatcaaaa 392  Q
    || || | |||||||||    |||||||||  |||| |||||||||    
T  29336963 acgattcgatagcattagatattgatactttgagtgattatcaaaa 29336918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2268636 - 2268555
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttct 84  Q
    ||||||||||||||||| ||||  |||||| | || | ||||||||||||||||| |||||||||||||||| | |||||||||    
T  2268636 gtatcaaaagtaagtat-ttttgttatcgtctccatagggactagtgcgatattc-taagccgttcaacaatcggtatcgttct 2268555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 21693219 - 21693141
Alignment:
Q  2 tatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgtt 82  Q
    |||||||||||||||| |||   |||||| | || ||||||||| |||| ||||  ||||||||||||||| |||||||||    
T  21693219 tatcaaaagtaagtatttttgtgtatcgtctccacaaggactagcgcgacattc--aagccgttcaacaatcgttatcgtt 21693141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 5064282 - 5064204
Alignment:
Q  2 tatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgtt 82  Q
    |||||||||||||||| ||||  |||||| |||| | ||| | ||||||||||| |||||||||||||||| | |||||||    
T  5064282 tatcaaaagtaagtat-ttttgttatcgtcttcacagggattggtgcgatattc-taagccgttcaacaatcggtatcgtt 5064204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 314; Significance: 1e-177; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 4 - 669
Target Start/End: Complemental strand, 20383448 - 20382776
Alignment:
Q  4 tcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttctatgttaagggtttgtaaaa 103  Q
    |||||||||||||||||||| |||| |||||||| ||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  20383448 tcaaaagtaagtatgttttagtatctttttcaaagggactggtgtgatattcgtaagtcgttcaacaattgttatcgttctaagttaagggtttgtaaaa 20383349  T
Q  104 tggtttgttttg-aaaacctaatcgggctataatgcagtaaataaaactgagttaaacagaggattaaaactaatgggattagacaattcattaaccaaa 202  Q
    | |||| ||||  ||||||||||| | ||| ||||| |||| ||||||||||||||||||||   ||||  |  |||||||||||  |||||||||||||    
T  20383348 tagttttttttctaaaacctaatcagactaaaatgcggtaattaaaactgagttaaacagagagataaacttgttgggattagac--ttcattaaccaaa 20383251  T
Q  203 cgtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgt 302  Q
    ||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| || ||| ||||||||| |||||||||||||||||||||||||||    
T  20383250 cgttgcatatattatcttgatcaagcatatagattctagctatcaatcaatattaccatgtatcactcgacatacatcgtttatgtctaaataatgtcgt 20383151  T
Q  303 gagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaaattca 402  Q
    |||||||||| ||||||||| ||||| |||| ||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20383150 gagttcaatcatattgtttaatcgacaatttttcgacctattaaacaacacaatagcattaagacttgatacttgaagtggttatcaaaacctaaatcca 20383051  T
Q  403 cttctagtatttaattagggtttaatag--atgtttatcctatatctagattcaaaaagtatttct-aataac------------aaatcaaacatacat 487  Q
     |||||||||    ||||||||||||||  ||||||||||||| |||  ||||||||||||||| | ||||||            |||||||||||||||    
T  20383050 tttctagtat----ttagggtttaatagatatgtttatcctatttct--attcaaaaagtatttttcaataacaaatcaaatcataaatcaaacatacat 20382957  T
Q  488 aacaaggataacatcaatattaaaggacaactagaatcatgatatattactaagatcatagaaaatacatactaagtttgattagtta---gtagttaca 584  Q
    | |||||||||||||||||||||||    |||||||||   |||| ||||||||||||||||||||||||||| ||||||||||||||    || |  ||    
T  20382956 agcaaggataacatcaatattaaagattgactagaatc---atattttactaagatcatagaaaatacatactgagtttgattagttacacctaatccca 20382860  T
Q  585 tacaaatgagatttagctactcgttgttatgatagccttgcaaaattggaagaaatgaatggaatacttatcaagatgatgattt 669  Q
     ||||||||||||||||||||| || | ||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  20382859 -acaaatgagatttagctactcattatcatggtagccttgcaaaattggaagaaatgagtggaatacatatcaagatgatgattt 20382776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 25 - 669
Target Start/End: Complemental strand, 14759808 - 14759177
Alignment:
Q  25 tatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttctatgttaagggtttgtaaaatggtttgttttgaaaacctaa 124  Q
    |||||||| || | |||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||||  ||||| |||||||  |||| |||||    
T  14759808 tatcgtttccatagggactagtacgatattcgtaagccgttcaacaatggttatcgttcttagttaagggttttgaaaattgtttgttgcgaaatcctaa 14759709  T
Q  125 tcgggctataatgcagtaaataaaactgagttaaacagaggattaaaactaatgggattagacaattcattaaccaaacgtcgcatatattctcttgatc 224  Q
    |||| ||||||||  ||||||||| || ||||||||| ||   |||||||  ||||||||||   |||||||||||||||||||||||||||||||||||    
T  14759708 tcggactataatgaggtaaataaa-ctaagttaaacaaagacgtaaaactgttgggattagat--ttcattaaccaaacgtcgcatatattctcttgatc 14759612  T
Q  225 aagcatatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagt 324  Q
    |||||||||        |||||||||||||||| || ||| || ||||||| ||| ||| ||||||||| |||||||||||| ||||| || |||||| |    
T  14759611 aagcatataa-------ctatcaatcaatattaccaagtatcattcgacaa-cattgttcatgtctaaaaaatgtcgtgagtgcaatcataatgtttaat 14759520  T
Q  325 cgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaaattcacttctagtatttaattagggtt 424  Q
     ||||||||||| | |||||||||||| ||||||||||||||||||||||| || |||| ||| ||||||||||| || |||||||||    ||||||||    
T  14759519 tgacgatttctcggtctattaaacaatgcaatagcattaagacttgatactagatgtggatataaaaacctaaatccatttctagtat----ttagggtt 14759424  T
Q  425 taatagatgtttatcctatatctagattcaaaaagta-tttctaataacaaatcaaa-catacat-aacaaggataacatcaatattaaaggacaactag 521  Q
    ||||||||||||||||||||||| ||||||||||||| |||  |||||||||||||| |||| || ||  | ||||||||||||||||||| ||||||||    
T  14759423 taatagatgtttatcctatatcttgattcaaaaagtagttttgaataacaaatcaaatcataaatcaaacatgataacatcaatattaaagaacaactag 14759324  T
Q  522 aatcatgatatattactaagatcatagaaaatacatactaagtttgattagtta---gtagttacatacaaatgagatttagctactcgttgttatgata 618  Q
    ||||   ||||||||||||||||||| | |||||||| | |||||||| |  ||    || |  || |||||||||||||| |||||| || | ||| ||    
T  14759323 aatc---atatattactaagatcataaagaatacatattgagtttgatcaaatacctttaatccca-acaaatgagatttaactactcattatcatggta 14759228  T
Q  619 gccttgcaaaattggaagaaatgaatggaatacttatcaagatgatgattt 669  Q
    ||||||||||||||||||||||| ||||||| | |||||||||| ||||||    
T  14759227 gccttgcaaaattggaagaaatggatggaatgcatatcaagatgttgattt 14759177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 266 - 398
Target Start/End: Original strand, 9948955 - 9949087
Alignment:
Q  266 cactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaag 365  Q
    |||||||||| |||| || ||| ||||||||||| |||| |||||| |||| ||||| ||||||||||||||  ||||||||| || ||||| |||||||    
T  9948955 cactcgacaa-catccttcatgactaaataatgttgtgatttcaattgtatcgtttaatcgacgatttctcaatctattaaacgatccaataacattaag 9949053  T
Q  366 -acttgatacttgaagtggttatcaaaacctaaa 398  Q
      ||||||| || ||||| ||| |||||||||||    
T  9949054 ttcttgatatttaaagtgattaccaaaacctaaa 9949087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 11015461 - 11015536
Alignment:
Q  276 acatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaat 351  Q
    ||||| || ||||||||||||| | ||||| || ||||||| ||||| ||||||||||||||  ||||||||||||    
T  11015461 acatcattcatgtctaaataatattgtgagatcgatcgtatcgtttaatcgacgatttctcaatctattaaacaat 11015536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 25541546 - 25541463
Alignment:
Q  282 tttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaag 365  Q
    ||||||| |||||||  || ||||||||||||||| ||||  || |||||||||||  ||||||||| || |||||||||||||    
T  25541546 tttatgtgtaaataacttcatgagttcaatcgtatcgttttatcaacgatttctcaatctattaaacgatccaatagcattaag 25541463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 285 - 399
Target Start/End: Original strand, 18750400 - 18750513
Alignment:
Q  285 atgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggt 384  Q
    ||||||||||||||| |||| ||||| ||||| ||||| ||||| ||||||||  ||||| ||||     |||||||||||| |||||  ||||| || |    
T  18750400 atgtctaaataatgttgtgatttcaaccgtatcgtttaatcgactatttctcaatctatt-aacatcctgatagcattaagatttgatgtttgaaatgat 18750498  T
Q  385 tatcaaaacctaaat 399  Q
    |||||||||||||||    
T  18750499 tatcaaaacctaaat 18750513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1051157 - 1051227
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaat 72  Q
    ||||||||||||||||| ||||  |||||| | || | ||||| ||||||||||| ||||||||||||||||    
T  1051157 gtatcaaaagtaagtattttttgttatcgtctccatagggactggtgcgatattc-taagccgttcaacaat 1051227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 26604788 - 26604705
Alignment:
Q  282 tttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaag 365  Q
    ||||||||||||| |  || |||||||||||| || ||||| ||||||||||| ||  ||||||||| ||  ||||||||||||    
T  26604788 tttatgtctaaattacttcatgagttcaatcggatcgtttaatcgacgatttcccaatctattaaacgatcaaatagcattaag 26604705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 393
Target Start/End: Original strand, 22870491 - 22870609
Alignment:
Q  275 aacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatac 374  Q
    |||||| || |||||||||| || | |||| ||| ||||||| ||||| ||||||||||||||  ||||||||| |||  || |||||||   | |||||    
T  22870491 aacatcattcatgtctaaatgatattgtgatttcgatcgtatcgtttaatcgacgatttctcaatctattaaacgatatgatggcattaaccttcgatac 22870590  T
Q  375 ttgaagtggttatcaaaac 393  Q
    || | ||| ||||||||||    
T  22870591 ttaaggtgattatcaaaac 22870609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 461
Target Start/End: Original strand, 28588709 - 28589163
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttctatgttaagggtttgta 100  Q
    ||||||| |||||||| |||||| ||||||||  | | ||| || |||||||||  ||||||||||||||||||||||||||||| |||| |||||| ||    
T  28588709 gtatcaatagtaagtaagttttaatatcgtttctacagggattaatgcgatatta-taagccgttcaacaattgttatcgttctaagtta-gggttttta 28588806  T
Q  101 aaatggtttgttttgaaaa-cctaatcgggctataatgcagtaaataaaactgagttaaacagaggattaaaactaatgggattagacaattcattaacc 199  Q
    |||| |||||||| ||||| ||||||||| ||||||||| |||||||||   |||||||||||||  ||||||||  |||||||||||  |||| |||||    
T  28588807 aaattgtttgtttcgaaaaacctaatcggactataatgcggtaaataaactagagttaaacagagacttaaaactgctgggattagac--ttcactaacc 28588904  T
Q  200 aaacgtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgt 299  Q
    ||||||| ||||||||||| | || |  | ||||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||| ||| ||||||||    
T  28588905 aaacgtcacatatattctcataattagacgtatagattctagctatcaatcaatattaccacgtatcactcgacagacatcgtttatatcttaataatgt 28589004  T
Q  300 cgtgagttcaatcgtattg-tttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaaa 398  Q
    ||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||||||||||||   || |||||||||||||||||||    
T  28589005 cgtgagttcaatcgtattgttttaattgacgatttctcggcctattaaacaatacaataacattaagacttgatataagatgtggttatcaaaacctaaa 28589104  T
Q  399 ttcacttctagtatttaattagggtttaatagatgtttatcctatatctagattcaaaaagta 461  Q
      || |||||||||    ||||||||||||||| |||||||||| |||| |||||||||||||    
T  28589105 accatttctagtat----ttagggtttaatagaagtttatcctaaatcttgattcaaaaagta 28589163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 365
Target Start/End: Complemental strand, 6640425 - 6640344
Alignment:
Q  284 tatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaag 365  Q
    |||||||||||||  || ||||||||||||||| ||||| |||||||| |||||  |||||||||||||||| | |||||||    
T  6640425 tatgtctaaataacttcatgagttcaatcgtatcgtttaatcgacgatgtctcaatctattaaacaatacaacatcattaag 6640344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8847792 - 8847874
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttcta 85  Q
    ||||||||||||||||| |||   |||||| | || ||||||||| |||||||||  ||||||||||||||| ||||||||||||    
T  8847792 gtatcaaaagtaagtatttttgtgtatcgtctccacaaggactagcgcgatattc--aagccgttcaacaatcgttatcgttcta 8847874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 8895311 - 8895231
Alignment:
Q  285 atgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaag 365  Q
    ||||||||||||  || |||||||||||||||  |||| |||| ||||||||| |||||||||| || ||| |||||||||    
T  8895311 atgtctaaataacttcatgagttcaatcgtatcatttaatcgatgatttctcaacctattaaacgatccaaaagcattaag 8895231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 337
Target Start/End: Complemental strand, 52183160 - 52183076
Alignment:
Q  252 atattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctca 337  Q
    ||||||||| ||| ||||| |||| |||| || |||||||||| |||| ||||| |||||||||| ||||| | ||||||||||||    
T  52183160 atattatcatgtatcactctacaa-catcattcatgtctaaatgatgttgtgagatcaatcgtatcgtttaattgacgatttctca 52183076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 12097377 - 12097457
Alignment:
Q  285 atgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaag 365  Q
    |||||||||||||| |||||  || ||  ||| ||||| || |||||||||||  ||||||||| || |||||||||||||    
T  12097377 atgtctaaataatgacgtgaaatcgattatatcgtttaatccacgatttctcaatctattaaacgatccaatagcattaag 12097457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 182; Significance: 5e-98; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 1 - 466
Target Start/End: Original strand, 13497614 - 13498076
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgtt-atcgttctatgttaagggtttgt 99  Q
    ||||||||||||||||||| ||| |||| | |  | | ||||||||||||||||||||||||||||||||||| || |||||| || ||||||| |||||    
T  13497614 gtatcaaaagtaagtatgtattagtatcatatctatagggactagtgcgatattcgtaagccgttcaacaattttttatcgttttaagttaaggttttgt 13497713  T
Q  100 aaaatggtttgttttgaaaacctaatcgggctataatgcagtaaa-taaaactgagttaaacagaggattaaaactaatgggattagacaattcattaac 198  Q
    ||||| |||||||  |||||||||||||| |||||||||  |||| ||||| ||||||| ||||||||||||| ||  |||| ||||||  ||||||||     
T  13497714 aaaattgtttgttgcgaaaacctaatcggactataatgcgataaaataaaattgagttagacagaggattaaagctgttggggttagac--ttcattaag 13497811  T
Q  199 caaacgtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatat--tatcacgtaacactcgacaaacatcgtttatgtctaaataa 296  Q
     ||| ||||||||||||||||| ||||||||||||||||||| |||| |||||||||  ||||| ||  |||||||||| ||||  |||||||||| |||    
T  13497812 aaaatgtcgcatatattctcttaatcaagcatatagattctagctataaatcaatatattatcatgtttcactcgacaa-catcaattatgtctaagtaa 13497910  T
Q  297 tgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaaccta 396  Q
    | |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| |||| ||||||||| ||||| |||||||||||||    
T  13497911 tatcgtgaattcaatcgtattgtttagtcgacaatttctcggcctattaaacaatacaataacatgaagagttgatactt-aagtgattatcaaaaccta 13498009  T
Q  397 aattcacttctagtatttaattagggtttaatagatgtttatcctatatctagattcaaaaagtatttct 466  Q
    ||  || ||||||||||||    ||||| |||||||  ||||||||| | |||||||||||  |||||||    
T  13498010 aaaccatttctagtattta---ggggttcaatagattattatcctatgtgtagattcaaaagatatttct 13498076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 198 - 398
Target Start/End: Complemental strand, 16428784 - 16428586
Alignment:
Q  198 ccaaacgtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataat 297  Q
    |||||||||||||| |||||| ||||   ||||||||||||||  ||| | || | |||| ||| || || ||||||| || | ||||||||||||||||    
T  16428784 ccaaacgtcgcatacattctcatgattgtgcatatagattctagttattattcgacattaccacatatca-tcgacaa-caccatttatgtctaaataat 16428687  T
Q  298 gtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaa 397  Q
    |||||| | |||||||||||||||  |||||||||||||||||||| |||||||   |||||||||||  |||||| ||||| || ||||  ||||||||    
T  16428686 gtcgtgcgctcaatcgtattgtttgatcgacgatttctcagcctatcaaacaatcatatagcattaagctttgatatttgaaatgattattcaaacctaa 16428587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 608 - 669
Target Start/End: Original strand, 13498198 - 13498259
Alignment:
Q  608 ttgttatgatagccttgcaaaattggaagaaatgaatggaatacttatcaagatgatgattt 669  Q
    |||| ||| ||||||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  13498198 ttgtcatggtagccttacaaaattggaagaaatgtgtggaatacttatcaagatgttgattt 13498259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 24852997 - 24852924
Alignment:
Q  275 aacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaac 348  Q
    |||||| || ||||||||||||| | ||||| |||||||||| ||||| ||||| ||||||||  |||||||||    
T  24852997 aacatcattcatgtctaaataatattgtgagatcaatcgtatcgtttaatcgacaatttctcaatctattaaac 24852924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 393
Target Start/End: Complemental strand, 11909886 - 11909803
Alignment:
Q  310 atcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaac 393  Q
    ||||||| ||||| ||||||||||||||| ||||||||| || ||| ||||| |||  | |||||  |||||| ||||||||||    
T  11909886 atcgtatcgtttaatcgacgatttctcagtctattaaacgattcaaaagcatgaagtttagatacaagaagtgattatcaaaac 11909803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 352
Target Start/End: Complemental strand, 13031743 - 13031696
Alignment:
Q  305 gttcaatcgtattgtttagtcgacgatttctcagcctattaaacaata 352  Q
    ||||||| |||||||||| |||||||| |||||||||||||| |||||    
T  13031743 gttcaattgtattgtttaatcgacgatctctcagcctattaaccaata 13031696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 252 - 348
Target Start/End: Complemental strand, 37439526 - 37439431
Alignment:
Q  252 atattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaac 348  Q
    ||||||||||||| ||||| |||| |||| || |||||||||| || | |||||  |||||||||  |||| || |||||||||||  |||||||||    
T  37439526 atattatcacgtatcactcaacaa-catcattcatgtctaaatgatattgtgagggcaatcgtatcatttaatcaacgatttctcaatctattaaac 37439431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 1e-61; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 480
Target Start/End: Original strand, 17346217 - 17346688
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttctatgttaagggtttgta 100  Q
    ||||||||||||||||| ||||  |||| |||||| | ||||||||||||||||  ||||  |||||| |||| ||||||| ||| || | | |   |||    
T  17346217 gtatcaaaagtaagtatatttttgtatcattttcatatggactagtgcgatattt-taagttgttcaataattattatcgtcctaagtgatgag---gta 17346312  T
Q  101 aaa-tggtttgttttgaaaacc-taatcgggctataatgcagtaaataaaactgagttaaacagaggattaaaactaatgggattagacaattcattaac 198  Q
     || | |||||||||| ||||| ||||||  ||||||||| |||| ||| |  |||||||||||||   |||||||  |||||||||||  ||||||||     
T  17346313 taacttgtttgttttgtaaaccataatcgaactataatgcggtaattaagatagagttaaacagagatataaaactgctgggattagac--ttcattaag 17346410  T
Q  199 caaacgtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatg 298  Q
    ||||| ||||| ||||||||||| |||| ||||||||  |||  ||| | || ||||||||| ||| |||||||| | |||| |||||||||||||||||    
T  17346411 caaacctcgcacatattctcttggtcaatcatatagacactagttattattcgatattatcatgtatcactcgacgagcatcatttatgtctaaataatg 17346510  T
Q  299 tcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaaa 398  Q
    ||||| |||| ||||||||| ||| |||||||||||||| |||||||| |||||||||||||| ||| |||||||||| ||||| ||||| ||||| |||    
T  17346511 tcgtgggttcgatcgtattgcttaatcgacgatttctcaacctattaagcaatacaatagcatgaaggcttgatacttaaagtgattatc-aaacccaaa 17346609  T
Q  399 ttcacttctagtatttaattagggtttaatagatgtttatcctatatctagattcaaaaagtatttct-aataacaaatcaaa 480  Q
      || |||||||||    ||||| ||||||||||| |||||||   ||||||||||||||| |||| | |||||||| |||||    
T  17346610 accatttctagtat----ttaggttttaatagatgattatcctgcgtctagattcaaaaagcatttttcaataacaattcaaa 17346688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 398
Target Start/End: Original strand, 37335372 - 37335522
Alignment:
Q  247 aatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaa 346  Q
    |||| |||||||||| || |||||||||| || |||||||||||||| |||||||||| ||| ||||||| ||||| || |||||||||||  |||||||    
T  37335372 aatcgatattatcacatatcactcgacaa-caccgtttatgtctaaacaatgtcgtgacttcgatcgtatcgtttaatcaacgatttctcaatctattaa 37335470  T
Q  347 acaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaaa 398  Q
    || ||   |||||||||||  |||||| || ||||  |||  ||||||||||    
T  37335471 acgatctgatagcattaagctttgatatttaaagttattactaaaacctaaa 37335522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 228 - 366
Target Start/End: Original strand, 40153555 - 40153693
Alignment:
Q  228 catatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcga 327  Q
    |||||||||||||  ||| ||||||||||||  |||| ||||| ||  ||||| |||||||||||| ||||  ||  |||| ||| ||||| ||| || |    
T  40153555 catatagattctagttattaatcaatattattgcgtatcactcaacgcacatcatttatgtctaaacaatgatgttggttcgatcatattgcttaatcaa 40153654  T
Q  328 cgatttctcagcctattaaacaatacaatagcattaaga 366  Q
    |||||| |||||||||||| ||||||||||||| |||||    
T  40153655 cgatttttcagcctattaatcaatacaatagcagtaaga 40153693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 252 - 365
Target Start/End: Original strand, 34738369 - 34738481
Alignment:
Q  252 atattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaat 351  Q
    ||||||||||||| ||| ||||||  | | ||||||||||||| || | ||||| |||||||||| ||||| ||||||||||||||  ||||||||| ||    
T  34738369 atattatcacgtatcacccgacaat-accatttatgtctaaatgatattgtgagatcaatcgtatcgtttaatcgacgatttctcaatctattaaacgat 34738467  T
Q  352 acaatagcattaag 365  Q
     ||||||| |||||    
T  34738468 ccaatagcgttaag 34738481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 268 - 366
Target Start/End: Complemental strand, 14515320 - 14515222
Alignment:
Q  268 ctcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaaga 366  Q
    |||| ||||||  |||||||||| |||||||| ||||| || ||| ||| | ||| |||||||||||| |||||||||| |||||  ||||||||||||    
T  14515320 ctcggcaaacaatgtttatgtctgaataatgttgtgaggtcgatcatatcggttaatcgacgatttctgagcctattaaccaatatgatagcattaaga 14515222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 661
Target Start/End: Original strand, 17346710 - 17346883
Alignment:
Q  488 aacaaggataacatcaatattaaaggacaactagaatcatgatatattactaagatcatagaaaatacatactaagtttgattagttagtagtta---ca 584  Q
    |||||||||||||||||||||||   ||||||| ||||||   ||||| ||||||||| ||||||||||||   |||||  ||| |||  | |||   |     
T  17346710 aacaaggataacatcaatattaataaacaactaaaatcat---atattgctaagatcaaagaaaatacatatcgagttttgttaattac-atttaatccc 17346805  T
Q  585 tacaaatgagatttagctactcgttgttatgatagccttgcaaaattg-gaagaaatgaatggaatacttatcaagat 661  Q
     ||||||||||||||||||||| |||| ||| ||||||||||||| || ||||||| || || |||||  ||||||||    
T  17346806 aacaaatgagatttagctactcattgtcatggtagccttgcaaaaatgagaagaaaagagtgaaatacacatcaagat 17346883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 42747073 - 42747135
Alignment:
Q  6 aaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaaca 70  Q
    |||||||||||| ||||| ||||||||||| | |||||||||||||| || ||| ||||||||||    
T  42747073 aaaagtaagtat-ttttaatatcgttttcacacggactagtgcgata-tcataaaccgttcaaca 42747135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 42747310 - 42747409
Alignment:
Q  247 aatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaa 346  Q
    |||| ||||||||| ||| ||| |||||| |||| || | |||||||| || | |||| | | ||||||||||||| ||||||||||||||  |||||||    
T  42747310 aatcgatattatcatgtatcacccgacaa-catcattcacgtctaaatgatattgtgattacgatcgtattgtttaatcgacgatttctcaatctattaa 42747408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 1e-52; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 415
Target Start/End: Complemental strand, 23431297 - 23430890
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttctatgttaagggtttgta 100  Q
    |||| ||||||||||||  |||| |||||||| || | ||||||||||||||||  |||||| |||||||||  ||||| ||||| ||||||||||| ||    
T  23431297 gtataaaaagtaagtat--tttaatatcgtttccacatggactagtgcgatatta-taagccattcaacaatgattatcattctaagttaagggtttata 23431201  T
Q  101 aaatggtttgttttgaaaacctaatcgggctataatgcagtaaataaaactgag-ttaaacagaggattaaaactaatgggattagacaattcattaacc 199  Q
    | ||  |||||| ||||||| || | |  |||| |||| ||||||||||| ||| ||  ||||||   ||||| || |||||||||||  |||||| |||    
T  23431200 agattctttgttatgaaaac-tatttgaactattatgcggtaaataaaac-gagattggacagagacataaaaatactgggattagac--ttcattgacc 23431105  T
Q  200 aaacgtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgt 299  Q
    |||||||||||||||  || ||||||| ||||||||||||| |||||  || |||||| |||||| || ||||||| |||| |||||||||| |||||||    
T  23431104 aaacgtcgcatatatcttcatgatcaaacatatagattctagctatcgctcgatattaccacgtatcattcgacaa-catcatttatgtctacataatgt 23431006  T
Q  300 cgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaaat 399  Q
      ||||||||| | ||||||||| | |||||||||||| |||||||||||||||| || |||||||| ||||||| | |  || ||||||||||| |||     
T  23431005 tttgagttcaaacatattgtttaattgacgatttctcaacctattaaacaatacagtaacattaagatttgatacataatatgattatcaaaaccaaaaa 23430906  T
Q  400 tcacttctagtattta 415  Q
     || ||||||||||||    
T  23430905 ccatttctagtattta 23430890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 75 - 480
Target Start/End: Complemental strand, 23391710 - 23391317
Alignment:
Q  75 ttatcgttctatgttaagggtttgtaaaatggtttgttttgaaaacctaatcgggctataatgcagtaaataaaactgag-ttaaacagaggattaaaac 173  Q
    ||||| ||||||||||||||||| ||||||  |||||| ||||||| || | |  ||||||||| ||||||||||| ||| ||| |||||| | ||||||    
T  23391710 ttatcattctatgttaagggtttataaaattatttgttatgaaaac-tatttgaactataatgcggtaaataaaac-gagattagacagagaagtaaaac 23391613  T
Q  174 taatgggattagacaattcattaaccaaacgtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatattatcacgtaacactcgac 273  Q
    |  |||||||||||  || ||| | |||||||| |||||||  |  | ||||| |||| ||||| || |||||| || | |||| ||||||   ||||||    
T  23391612 tgttgggattagac--tttattgatcaaacgtcacatatatctttattatcaaacatacagatt-tagctatcactcgaaattaccacgta---ctcgac 23391519  T
Q  274 aaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgata 373  Q
    |  |||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| | ||||||    
T  23391518 a--catcatttatgtctaaataatgtcgtgagttcaatcatattgtttaatcgatgatttctcagcctattaaacaatacaatagcattaatatttgata 23391421  T
Q  374 cttga--agtggttatcaaaacctaaattcacttctagtatttaattagggtttaatagatgtttatcctatatctagattcaaaaagtatttct-aata 470  Q
    | | |   ||| ||||||||| |||||  || |||||||||    |||| |||||||||||| |||| ||| | ||||||||||||||||||| | ||||    
T  23391420 cataacgtgtgattatcaaaagctaaaaccatttctagtat----ttagagtttaatagatg-ttattcta-acctagattcaaaaagtatttttcaata 23391327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 365
Target Start/End: Original strand, 17404834 - 17404917
Alignment:
Q  282 tttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaag 365  Q
    |||||||||||||||| || ||||||||||||||| ||||| |  |||||||||||  ||||||||| || |||||||||||||    
T  17404834 tttatgtctaaataatttcatgagttcaatcgtatcgtttaataaacgatttctcaatctattaaacgattcaatagcattaag 17404917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 229 - 348
Target Start/End: Complemental strand, 31095743 - 31095625
Alignment:
Q  229 atatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgac 328  Q
    |||| ||||||| |||| |||  ||||| |||  || |||||||||| |||  ||||||||||||||||||||||| ||| |||||| |||||| |||||    
T  31095743 atatggattctagctattaattgatattctcatatatcactcgacaa-cattatttatgtctaaataatgtcgtgatttcgatcgtactgtttaatcgac 31095645  T
Q  329 gatttctcagcctattaaac 348  Q
    ||||| |||  |||||||||    
T  31095644 gatttttcaatctattaaac 31095625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 591 - 639
Target Start/End: Complemental strand, 6817209 - 6817161
Alignment:
Q  591 tgagatttagctactcgttgttatgatagccttgcaaaattggaagaaa 639  Q
    |||||||||||||||| |||| ||| ||||||||||||| |||||||||    
T  6817209 tgagatttagctactcattgtcatggtagccttgcaaaaatggaagaaa 6817161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 4501055 - 4501124
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaat 72  Q
    ||||||||||||||||| ||||  |||||| | || | ||||||||||||||||| ||||||||||||||||    
T  4501055 gtatcaaaagtaagtat-ttttgttatcgtctccacatggactagtgcgatattc-taagccgttcaacaat 4501124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 17735602 - 17735668
Alignment:
Q  282 tttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaac 348  Q
    ||||||||||||| || | ||| | |||||||||| ||||| ||||||||||||||  |||||||||    
T  17735602 tttatgtctaaatgatattgtgcgatcaatcgtatcgtttaatcgacgatttctcaatctattaaac 17735668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 348
Target Start/End: Original strand, 19036871 - 19036937
Alignment:
Q  282 tttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaac 348  Q
    ||||||||||||| || | ||| | |||||||||| ||||| ||||||||||||||  |||||||||    
T  19036871 tttatgtctaaatgatattgtgcgatcaatcgtatcgtttaatcgacgatttctcaatctattaaac 19036937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 461400 - 461339
Alignment:
Q  275 aacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctc 336  Q
    |||||| || |||||||||| || | ||||| |||||||||| ||||| |||||||||||||    
T  461400 aacatcattcatgtctaaatgatattgtgagatcaatcgtatcgtttaatcgacgatttctc 461339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 24705040 - 24705135
Alignment:
Q  252 atattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaac 348  Q
    ||||||||| ||| ||||| ||||  |||| | |||||||||| || | ||||| |||||| ||| ||||| ||||||||||||||  |||||||||    
T  24705040 atattatcatgtatcactcaacaag-atcgctcatgtctaaatgatattgtgagatcaatcatatcgtttaatcgacgatttctcaatctattaaac 24705135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 2e-45; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 204 - 415
Target Start/End: Original strand, 2784864 - 2785071
Alignment:
Q  204 gtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtg 303  Q
    ||||||||||||||  |||||||||||||||| ||||  |||||||| |||||| || ||| |||| ||||| |||| ||||| |||| |||||||||||    
T  2784864 gtcgcatatattcttatgatcaagcatatagactctagttatcaatccatattaccaagtatcacttgacaa-catcatttatatctatataatgtcgtg 2784962  T
Q  304 agttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaaattcac 403  Q
    ||||||||| ||||   || ||||| ||||||  ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||     
T  2784963 agttcaatcatatt---taatcgacaatttcttggcctattaaacaatacaatagcattaagacttgatacatgatgtggttatcaaaacctaaaaccat 2785059  T
Q  404 ttctagtattta 415  Q
    ||||||| ||||    
T  2785060 ttctagtgttta 2785071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 2769083 - 2769234
Alignment:
Q  12 aagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttctatgttaagggtttgtaaaatggtttgt 111  Q
    |||||| ||||| ||||||||  | | | ||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  2769083 aagtatattttagtatcgtttctacaggtactagtgtgatatta-taagccgttcaacaattgttatcgttctaagttaagggtttgtaaaattgtttgt 2769181  T
Q  112 tttgaaaacctaatcgggctataatgcagtaaataaaactgagttaaacagag 164  Q
    |  || ||| ||||||| | | ||||| ||||||||||   ||||||||||||    
T  2769182 tgcgagaacttaatcggacaaaaatgcggtaaataaaataaagttaaacagag 2769234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 2758882 - 2758959
Alignment:
Q  338 gcctattaaacaatacaatagcattaagacttgatacttgaagtggttatcaaaacctaaattcacttctagtattta 415  Q
    |||||||||||| ||||||| |||||||||||||||| ||| |||||||||||||||||||  || ||||||| ||||    
T  2758882 gcctattaaacactacaataacattaagacttgatacatgatgtggttatcaaaacctaaaaccatttctagtgttta 2758959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 27954017 - 27954099
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttcta 85  Q
    ||||||||||||||||| |||   |||||| |  | | ||||||| |||||||||  ||||||||||||||| ||||||||||||    
T  27954017 gtatcaaaagtaagtatttttgtgtatcgtctctagagggactagcgcgatattc--aagccgttcaacaatcgttatcgttcta 27954099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29865217 - 29865135
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttcta 85  Q
    ||||||||||||||||| |||   |||||| | || | |||||||||||||||||  ||| ||||||||||| | ||||||||||    
T  29865217 gtatcaaaagtaagtatttttgtgtatcgtctccacatggactagtgcgatattc--aagtcgttcaacaatcgatatcgttcta 29865135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 3e-19; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 234 - 398
Target Start/End: Complemental strand, 7063680 - 7063516
Alignment:
Q  234 gattctatctatcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgattt 333  Q
    ||||||| || | |||| ||||||||||  | |||||||||| |||| || ||||||||||||| || ||| |||||| |||| ||||| ||||||||||    
T  7063680 gattctagcttttaatcgatattatcacaaatcactcgacaa-catcattcatgtctaaataatatcatgatttcaattgtatcgtttaatcgacgattt 7063582  T
Q  334 ctcagcctattaaacaatacaatagcattaag-acttgatacttgaagtggttatcaaaacctaaa 398  Q
    ||||  ||||||||| || |||||||||||||  ||||||| || ||||| || ||||||| ||||    
T  7063581 ctcaatctattaaacgatccaatagcattaagttcttgatatttaaagtgattgtcaaaacttaaa 7063516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 247 - 393
Target Start/End: Original strand, 13248942 - 13249087
Alignment:
Q  247 aatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaa 346  Q
    |||||||||||||| ||| ||| |||||| |||| || |||||||||| ||   |||| ||||||||||| ||||| ||||||||||||||  |||||||    
T  13248942 aatcaatattatcatgtatcacccgacaa-catcattcatgtctaaatgataatgtgatttcaatcgtatcgtttaatcgacgatttctcaatctattaa 13249040  T
Q  347 acaatacaatagcattaagacttgatacttgaagtggttatcaaaac 393  Q
    || ||  ||||||||||||  | ||||||| | ||| ||||||||||    
T  13249041 acgatctaatagcattaagcttcgatacttaaggtgattatcaaaac 13249087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 285 - 366
Target Start/End: Original strand, 43102361 - 43102442
Alignment:
Q  285 atgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaaga 366  Q
    ||||||||||||  | ||| |||||||||||||| ||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  43102361 atgtctaaataagcttgtgggttcaatcgtattggttaatcgacgatttctcagcctattaaccaataggatagcattaaga 43102442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 39456736 - 39456653
Alignment:
Q  282 tttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaag 365  Q
    |||||||||||||||  || ||||||||||| ||| || || |||||| |||||||  ||||||||| || |||||||||||||    
T  39456736 tttatgtctaaataacttcatgagttcaatcatatcgtctaatcgacgttttctcaatctattaaacgatccaatagcattaag 39456653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 19329311 - 19329392
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttcta 85  Q
    ||||||||||||||||| |||| ||||||| | || | ||||| |||||||||||  ||||||||||||||| | ||| ||||||    
T  19329311 gtatcaaaagtaagtat-ttttgctatcgtctccacagggactggtgcgatattc--aagccgttcaacaatcgatattgttcta 19329392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 45620388 - 45620344
Alignment:
Q  46 tgcgatattcgtaagccgttcaacaattgttatcgttctatgttaa 91  Q
    |||||||||| |||||||||||||||||| |||||||||| |||||    
T  45620388 tgcgatattc-taagccgttcaacaattgatatcgttctaagttaa 45620344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 6847808 - 6847880
Alignment:
Q  275 aacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaa 347  Q
    |||||| || ||||||||||||| | ||||| | |||||||| ||||| |||| |||||||||  ||||||||    
T  6847808 aacatcattcatgtctaaataatattgtgagattaatcgtatcgtttaatcgatgatttctcaatctattaaa 6847880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 245 - 393
Target Start/End: Original strand, 31473481 - 31473628
Alignment:
Q  245 tcaatcaatattatcacgtaacactcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctatt 344  Q
    |||||| |||||||||| || |||  ||||| |||| || |||||||||| || | |||| ||  |||||||  | || ||||||||||||||  |||||    
T  31473481 tcaatcgatattatcacatatcacctgacaa-catcattcatgtctaaatgatattgtgattttgatcgtatcctgtaatcgacgatttctcaatctatt 31473579  T
Q  345 aaacaatacaatagcattaagacttgatacttgaagtggttatcaaaac 393  Q
    |||| || | ||| |||||||  ||||||||| | ||| ||||||||||    
T  31473580 aaacgatccgatatcattaagctttgatacttaaggtgattatcaaaac 31473628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 398
Target Start/End: Complemental strand, 2404 - 2192
Alignment:
Q  177 tgggattagacaattcattaaccaaacgtcgcatatattctcttgatcaagcatatagattctatctatcaatcaatattatcacgtaacactcgacaaa 276  Q
    |||||||||||  |||| | ||||| |||||||||||||||| |||||| ||||||||||||||  ||| |  | |||||| ||| || | ||||||||     
T  2404 tgggattagac--ttcactgaccaatcgtcgcatatattctcatgatcatgcatatagattctagttattatccgatattaccacatatc-ctcgacaa- 2309  T
Q  277 catcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaagacttgatactt 376  Q
    || | |||||||||||||     |||||| ||||||||||| |||  |||||||||||| || |||| || ||||   |||||||||||  |||||| ||    
T  2308 caccatttatgtctaaat-----cgtgagctcaatcgtattttttgatcgacgatttcttagtctatcaagcaatctgatagcattaagctttgatattt 2214  T
Q  377 gaagtggttatcaaaacctaaa 398  Q
    ||| || |||||||||||||||    
T  2213 gaaatgattatcaaaacctaaa 2192  T

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Target: scaffold0059 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 5559 - 5711
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaaaggactagtgcgatattcgtaagccgttcaacaattgttatcgttctatgttaagggtttgta 100  Q
    |||||||||||||||||  |||  |||| |||  ||| | ||||||||||||||  |||||||||||||||||| ||||||| || || | |||||| |     
T  5559 gtatcaaaagtaagtataattttgtatcatttctaaacgaactagtgcgatatt--taagccgttcaacaattgatatcgttttaagtgatgggtttat- 5655  T
Q  101 aaatggtttgttttgaaaacctaatcgggctataatgcagtaaataaaactgagtt 156  Q
    || | |||||||| ||||||||||| |  ||||| || | ||||||||| ||||||    
T  5656 aatttgtttgtttagaaaacctaatagaactatagtgaaataaataaaattgagtt 5711  T

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Target: scaffold0059; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 5819 - 5896
Alignment:
Q  268 ctcgacaaacatcgtttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctatta 345  Q
    |||||||||| |  ||||||||||||||| |||||| ||||  || ||||| ||| || ||||||||| |||||||||    
T  5819 ctcgacaaacgttatttatgtctaaataaagtcgtgggttcggtcatattgattaatcaacgatttcttagcctatta 5896  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 239842 - 239770
Alignment:
Q  1 gtatcaaaagtaagtatgttttactatcgttttcaaa-aggactagtgcgatattcgtaagccgttcaacaattg 74  Q
    |||||||||||||||||  |||  |||||||||||||  |||||||||||||||||  |||||||||||||||||    
T  239842 gtatcaaaagtaagtataattttgtatcgttttcaaatgggactagtgcgatattc--aagccgttcaacaattg 239770  T

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Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 239567 - 239497
Alignment:
Q  282 tttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaata 352  Q
    ||||||||||||||| || ||| |||| ||||||||| ||| || ||||||||| |||||||||| |||||    
T  239567 tttatgtctaaataacgttgtgggttcgatcgtattgattaatcaacgatttcttagcctattaatcaata 239497  T

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Target: scaffold0458 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 365
Target Start/End: Original strand, 6981 - 7064
Alignment:
Q  282 tttatgtctaaataatgtcgtgagttcaatcgtattgtttagtcgacgatttctcagcctattaaacaatacaatagcattaag 365  Q
    |||||||||||||||  || ||||||||||| ||| || || | |||| |||||||  ||||||||| || |||||||||||||    
T  6981 tttatgtctaaataacttcatgagttcaatcatatcgtctaattgacgttttctcaatctattaaacgatccaatagcattaag 7064  T

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