View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16679_low_5 (Length: 462)

Name: NF16679_low_5
Description: NF16679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16679_low_5
NF16679_low_5
[»] chr2 (68 HSPs)
chr2 (12-254)||(13136654-13136906)
chr2 (120-250)||(43722904-43723035)
chr2 (242-374)||(13136964-13137096)
chr2 (120-258)||(6825974-6826114)
chr2 (119-255)||(5104952-5105086)
chr2 (295-390)||(40781548-40781643)
chr2 (295-393)||(5666594-5666691)
chr2 (295-393)||(43723776-43723874)
chr2 (120-258)||(3874482-3874630)
chr2 (295-390)||(31585874-31585969)
chr2 (295-388)||(13971830-13971923)
chr2 (307-390)||(15470546-15470629)
chr2 (298-392)||(6826850-6826944)
chr2 (120-201)||(13972732-13972813)
chr2 (295-388)||(43207826-43207919)
chr2 (120-220)||(10599951-10600051)
chr2 (297-388)||(5105805-5105896)
chr2 (295-360)||(9185388-9185453)
chr2 (295-388)||(42368647-42368740)
chr2 (120-195)||(5665830-5665905)
chr2 (295-361)||(25959651-25959717)
chr2 (295-360)||(9188616-9188681)
chr2 (295-360)||(29440571-29440636)
chr2 (295-360)||(37279640-37279705)
chr2 (242-299)||(6826168-6826225)
chr2 (295-360)||(22021144-22021209)
chr2 (295-360)||(25874257-25874322)
chr2 (295-360)||(45493120-45493185)
chr2 (295-360)||(45500862-45500927)
chr2 (297-360)||(31427505-31427568)
chr2 (295-360)||(1386386-1386451)
chr2 (295-360)||(8888712-8888777)
chr2 (295-356)||(11347863-11347924)
chr2 (295-360)||(12219872-12219937)
chr2 (295-356)||(24235172-24235233)
chr2 (295-356)||(24238444-24238505)
chr2 (295-360)||(25138895-25138960)
chr2 (295-360)||(25870860-25870925)
chr2 (120-189)||(38014636-38014705)
chr2 (304-360)||(33310752-33310808)
chr2 (295-346)||(3875363-3875414)
chr2 (242-293)||(5666058-5666109)
chr2 (297-360)||(45457240-45457303)
chr2 (298-360)||(16790721-16790783)
chr2 (295-361)||(30274731-30274797)
chr2 (119-189)||(31430569-31430639)
chr2 (242-299)||(3874684-3874741)
chr2 (295-360)||(9966333-9966398)
chr2 (120-201)||(16788389-16788469)
chr2 (295-360)||(27266865-27266930)
chr2 (298-391)||(30926621-30926713)
chr2 (295-360)||(40259103-40259168)
chr2 (295-346)||(16179203-16179254)
chr2 (297-360)||(38015597-38015660)
chr2 (297-360)||(45453952-45454015)
chr2 (295-360)||(22630917-22630982)
chr2 (295-360)||(37937183-37937248)
chr2 (243-299)||(5105124-5105180)
chr2 (295-359)||(25820811-25820875)
chr2 (243-299)||(43723098-43723154)
chr2 (199-258)||(13972656-13972717)
chr2 (120-189)||(25873203-25873272)
chr2 (295-369)||(36808397-36808471)
chr2 (242-293)||(13972551-13972602)
chr2 (120-189)||(25869835-25869904)
chr2 (144-189)||(25139971-25140016)
chr2 (295-359)||(26366010-26366074)
chr2 (120-160)||(40780658-40780698)
[»] chr5 (61 HSPs)
chr5 (120-258)||(30065562-30065702)
chr5 (142-258)||(2836702-2836819)
chr5 (295-388)||(41876699-41876792)
chr5 (295-389)||(7271110-7271204)
chr5 (295-389)||(30066403-30066497)
chr5 (295-389)||(33552215-33552309)
chr5 (122-202)||(39191333-39191413)
chr5 (120-258)||(28788252-28788401)
chr5 (295-393)||(39192424-39192522)
chr5 (120-258)||(7270241-7270377)
chr5 (141-250)||(18031731-18031850)
chr5 (295-390)||(34831858-34831953)
chr5 (144-258)||(4100284-4100413)
chr5 (295-388)||(4099452-4099545)
chr5 (295-360)||(21332643-21332708)
chr5 (297-390)||(22131326-22131419)
chr5 (142-201)||(32837105-32837164)
chr5 (142-201)||(37214788-37214847)
chr5 (120-258)||(40916739-40916889)
chr5 (143-201)||(22937974-22938032)
chr5 (242-299)||(30065756-30065813)
chr5 (120-201)||(43490793-43490874)
chr5 (118-201)||(21827959-21828043)
chr5 (120-201)||(21336660-21336742)
chr5 (242-299)||(4100173-4100230)
chr5 (295-360)||(12058455-12058520)
chr5 (295-360)||(12088052-12088117)
chr5 (120-189)||(14016967-14017036)
chr5 (296-361)||(17664646-17664711)
chr5 (295-360)||(18952787-18952852)
chr5 (295-360)||(20055868-20055933)
chr5 (303-360)||(26752664-26752721)
chr5 (295-360)||(26895567-26895632)
chr5 (295-360)||(26907418-26907483)
chr5 (295-360)||(34132946-34133011)
chr5 (295-360)||(34143177-34143242)
chr5 (295-359)||(42063016-42063080)
chr5 (297-360)||(14016101-14016164)
chr5 (295-361)||(11959140-11959206)
chr5 (298-360)||(41306490-41306552)
chr5 (295-360)||(23044236-23044301)
chr5 (295-360)||(31863809-31863874)
chr5 (295-360)||(37215139-37215203)
chr5 (295-359)||(21335662-21335726)
chr5 (304-360)||(43491859-43491915)
chr5 (154-259)||(2837526-2837641)
chr5 (192-258)||(33551415-33551482)
chr5 (242-293)||(33551536-33551587)
chr5 (298-360)||(7625200-7625262)
chr5 (119-189)||(17747616-17747686)
chr5 (295-359)||(22936901-22936965)
chr5 (242-293)||(7270431-7270482)
chr5 (242-293)||(18031912-18031963)
chr5 (295-361)||(40583343-40583409)
chr5 (298-359)||(14375759-14375820)
chr5 (242-296)||(17663965-17664019)
chr5 (298-360)||(17748537-17748599)
chr5 (120-169)||(25329456-25329505)
chr5 (295-340)||(26292885-26292930)
chr5 (120-196)||(28442105-28442181)
chr5 (242-294)||(18240150-18240202)
[»] chr7 (53 HSPs)
chr7 (120-258)||(4694723-4694871)
chr7 (295-393)||(4595944-4596042)
chr7 (295-393)||(17730895-17730993)
chr7 (295-389)||(26557580-26557674)
chr7 (295-390)||(11919803-11919898)
chr7 (120-258)||(45287989-45288138)
chr7 (295-388)||(4542878-4542971)
chr7 (295-388)||(4546950-4547043)
chr7 (119-258)||(9865494-9865643)
chr7 (295-390)||(8277067-8277162)
chr7 (295-389)||(4695562-4695656)
chr7 (295-393)||(9271400-9271498)
chr7 (295-381)||(20594344-20594430)
chr7 (120-202)||(45291392-45291474)
chr7 (120-201)||(4596843-4596924)
chr7 (120-201)||(20081559-20081640)
chr7 (295-360)||(23224873-23224938)
chr7 (120-258)||(9080376-9080525)
chr7 (297-374)||(9864680-9864757)
chr7 (120-201)||(17729973-17730054)
chr7 (295-360)||(37415391-37415456)
chr7 (295-360)||(45287037-45287102)
chr7 (119-201)||(8276011-8276093)
chr7 (295-361)||(14683411-14683477)
chr7 (295-360)||(45290448-45290513)
chr7 (295-346)||(9132742-9132793)
chr7 (295-393)||(35961172-35961277)
chr7 (298-360)||(16165833-16165895)
chr7 (242-299)||(4694925-4694982)
chr7 (242-299)||(9865383-9865440)
chr7 (295-360)||(10345276-10345341)
chr7 (295-360)||(26136096-26136161)
chr7 (295-360)||(26144476-26144541)
chr7 (295-360)||(37166115-37166180)
chr7 (141-201)||(10344637-10344697)
chr7 (297-360)||(2441246-2441309)
chr7 (242-293)||(17730217-17730268)
chr7 (242-296)||(9273779-9273833)
chr7 (294-344)||(20080702-20080752)
chr7 (295-346)||(3067959-3068010)
chr7 (297-356)||(6603542-6603601)
chr7 (242-293)||(9080579-9080630)
chr7 (297-360)||(13449744-13449807)
chr7 (297-360)||(13842723-13842786)
chr7 (120-201)||(9273953-9274034)
chr7 (295-343)||(48645555-48645603)
chr7 (297-360)||(11398017-11398080)
chr7 (18-101)||(22620863-22620946)
chr7 (298-360)||(5242118-5242180)
chr7 (295-360)||(10469225-10469290)
chr7 (120-196)||(4542074-4542150)
chr7 (120-196)||(10431386-10431462)
chr7 (298-390)||(7227613-7227704)
[»] chr4 (99 HSPs)
chr4 (295-393)||(19827509-19827607)
chr4 (295-389)||(15445299-15445393)
chr4 (295-393)||(52006461-52006559)
chr4 (119-258)||(19819949-19820089)
chr4 (295-392)||(40903014-40903111)
chr4 (295-391)||(38283421-38283517)
chr4 (295-389)||(15429790-15429884)
chr4 (295-389)||(15436404-15436498)
chr4 (119-258)||(27677817-27677967)
chr4 (295-393)||(40795096-40795194)
chr4 (295-389)||(44164876-44164970)
chr4 (295-391)||(49270773-49270868)
chr4 (119-202)||(53010376-53010459)
chr4 (295-393)||(24044071-24044169)
chr4 (120-258)||(27691885-27692025)
chr4 (295-388)||(19820821-19820914)
chr4 (295-392)||(27676986-27677083)
chr4 (120-258)||(15430616-15430766)
chr4 (120-258)||(15437230-15437380)
chr4 (120-258)||(44164001-44164142)
chr4 (295-390)||(48415458-48415557)
chr4 (120-258)||(19826701-19826850)
chr4 (120-201)||(24044976-24045057)
chr4 (120-258)||(52007292-52007431)
chr4 (295-379)||(12782998-12783082)
chr4 (295-361)||(27014357-27014423)
chr4 (120-201)||(3718336-3718417)
chr4 (295-360)||(3797771-3797836)
chr4 (295-360)||(5670671-5670736)
chr4 (295-360)||(5672989-5673054)
chr4 (295-360)||(19859485-19859550)
chr4 (295-360)||(34017744-34017809)
chr4 (295-360)||(39501742-39501807)
chr4 (295-360)||(40616771-40616836)
chr4 (303-360)||(48637607-48637664)
chr4 (295-360)||(52530898-52530963)
chr4 (141-201)||(40794213-40794273)
chr4 (142-201)||(14571048-14571107)
chr4 (120-250)||(35509201-35509320)
chr4 (298-360)||(56198950-56199012)
chr4 (295-360)||(11195769-11195834)
chr4 (120-201)||(12782106-12782187)
chr4 (295-360)||(19864480-19864545)
chr4 (295-360)||(24150766-24150831)
chr4 (242-299)||(27677706-27677763)
chr4 (295-360)||(39498403-39498468)
chr4 (141-201)||(21419000-21419060)
chr4 (297-360)||(33927068-33927131)
chr4 (297-360)||(56195623-56195686)
chr4 (119-189)||(29323978-29324048)
chr4 (295-360)||(18673045-18673110)
chr4 (242-299)||(24044792-24044849)
chr4 (242-299)||(27691774-27691831)
chr4 (295-344)||(37103195-37103244)
chr4 (120-189)||(44809835-44809904)
chr4 (242-293)||(19820143-19820194)
chr4 (242-293)||(21419202-21419253)
chr4 (297-360)||(34319880-34319943)
chr4 (242-293)||(35509379-35509430)
chr4 (242-293)||(52007187-52007238)
chr4 (298-360)||(15405044-15405106)
chr4 (120-201)||(27013229-27013311)
chr4 (242-299)||(15430505-15430562)
chr4 (242-299)||(15437119-15437176)
chr4 (242-299)||(44164196-44164253)
chr4 (295-359)||(18911592-18911656)
chr4 (125-189)||(34320775-34320839)
chr4 (242-293)||(3718538-3718589)
chr4 (142-201)||(5680491-5680550)
chr4 (295-390)||(15432172-15432267)
chr4 (297-360)||(15812099-15812162)
chr4 (242-293)||(19826904-19826955)
chr4 (298-361)||(46955440-46955503)
chr4 (120-196)||(15431164-15431240)
chr4 (120-196)||(15437778-15437854)
chr4 (295-360)||(35510085-35510150)
chr4 (295-359)||(5706486-5706550)
chr4 (295-359)||(12238359-12238423)
chr4 (295-338)||(3719217-3719260)
chr4 (306-373)||(8871716-8871782)
chr4 (298-373)||(8877451-8877525)
chr4 (242-289)||(12782318-12782365)
chr4 (297-360)||(29324921-29324983)
chr4 (242-293)||(40794416-40794467)
chr4 (295-360)||(21419882-21419947)
chr4 (295-360)||(25962152-25962217)
chr4 (295-360)||(53009521-53009586)
chr4 (295-371)||(15164287-15164363)
chr4 (298-369)||(53094605-53094677)
chr4 (295-346)||(33408294-33408345)
chr4 (295-346)||(40493344-40493395)
chr4 (297-356)||(44808922-44808981)
chr4 (120-171)||(49269735-49269786)
chr4 (224-258)||(24044903-24044937)
chr4 (298-360)||(30392665-30392727)
chr4 (120-196)||(3798720-3798796)
chr4 (306-359)||(5681532-5681585)
chr4 (242-294)||(8875418-8875470)
chr4 (298-346)||(29544851-29544899)
[»] chr3 (104 HSPs)
chr3 (295-393)||(16244052-16244150)
chr3 (295-393)||(20728564-20728662)
chr3 (295-390)||(45896560-45896655)
chr3 (295-393)||(29343791-29343889)
chr3 (295-393)||(43927014-43927112)
chr3 (295-388)||(2775661-2775754)
chr3 (295-388)||(2778904-2778997)
chr3 (295-388)||(25584856-25584949)
chr3 (120-258)||(10880776-10880924)
chr3 (119-258)||(29344624-29344774)
chr3 (120-258)||(53814971-53815120)
chr3 (295-390)||(49742839-49742934)
chr3 (295-389)||(10881659-10881753)
chr3 (295-393)||(31549351-31549449)
chr3 (303-389)||(10902127-10902213)
chr3 (120-258)||(34984602-34984758)
chr3 (120-250)||(41976321-41976461)
chr3 (118-201)||(16243164-16243247)
chr3 (140-237)||(43808898-43809003)
chr3 (295-393)||(3840696-3840794)
chr3 (295-360)||(24125678-24125743)
chr3 (295-360)||(24128955-24129020)
chr3 (295-388)||(52309537-52309630)
chr3 (113-201)||(54460360-54460448)
chr3 (295-361)||(8461436-8461502)
chr3 (120-259)||(20729336-20729477)
chr3 (295-393)||(41977180-41977278)
chr3 (295-360)||(2873743-2873808)
chr3 (295-360)||(6922699-6922764)
chr3 (295-360)||(7486750-7486815)
chr3 (295-360)||(30690915-30690980)
chr3 (295-360)||(32287273-32287338)
chr3 (295-360)||(53816007-53816072)
chr3 (298-360)||(28266099-28266161)
chr3 (295-360)||(11190706-11190771)
chr3 (295-360)||(11784945-11785010)
chr3 (295-360)||(16184637-16184702)
chr3 (242-299)||(34984491-34984548)
chr3 (242-299)||(41976493-41976550)
chr3 (128-201)||(54736769-54736842)
chr3 (121-201)||(9380012-9380092)
chr3 (142-201)||(16185575-16185634)
chr3 (142-201)||(35411699-35411758)
chr3 (297-360)||(47051677-47051740)
chr3 (297-360)||(50461498-50461561)
chr3 (120-201)||(3839790-3839874)
chr3 (298-360)||(6434728-6434790)
chr3 (295-360)||(539006-539071)
chr3 (295-360)||(17528711-17528776)
chr3 (120-197)||(19305470-19305547)
chr3 (295-360)||(22416784-22416849)
chr3 (295-360)||(27092073-27092138)
chr3 (242-299)||(31548753-31548810)
chr3 (295-360)||(37408860-37408925)
chr3 (303-360)||(43809767-43809824)
chr3 (295-360)||(46885119-46885184)
chr3 (295-360)||(54723921-54723986)
chr3 (303-371)||(35751628-35751696)
chr3 (295-346)||(10885036-10885087)
chr3 (142-201)||(31548573-31548632)
chr3 (196-258)||(6445513-6445577)
chr3 (295-360)||(12561184-12561249)
chr3 (120-189)||(19302295-19302364)
chr3 (295-360)||(28008021-28008086)
chr3 (295-360)||(52990879-52990944)
chr3 (295-360)||(54720150-54720215)
chr3 (304-344)||(32367096-32367136)
chr3 (242-293)||(16243374-16243425)
chr3 (297-360)||(47055107-47055170)
chr3 (245-299)||(29344513-29344567)
chr3 (297-359)||(55031947-55032009)
chr3 (297-359)||(55034807-55034869)
chr3 (120-196)||(10884018-10884094)
chr3 (295-360)||(17531606-17531671)
chr3 (298-391)||(17546040-17546132)
chr3 (295-360)||(23298565-23298630)
chr3 (120-196)||(23299477-23299553)
chr3 (295-360)||(25442809-25442874)
chr3 (295-360)||(30219955-30220020)
chr3 (242-294)||(3293591-3293643)
chr3 (295-359)||(10106551-10106614)
chr3 (295-359)||(18641723-18641787)
chr3 (295-359)||(18644719-18644783)
chr3 (295-359)||(52200092-52200156)
chr3 (242-293)||(3840016-3840067)
chr3 (307-349)||(9392925-9392967)
chr3 (295-345)||(48064000-48064050)
chr3 (195-258)||(54460460-54460525)
chr3 (120-196)||(538015-538091)
chr3 (120-196)||(6921890-6921966)
chr3 (242-299)||(10880978-10881035)
chr3 (295-360)||(17039972-17040037)
chr3 (295-360)||(17141587-17141652)
chr3 (295-360)||(34983803-34983868)
chr3 (295-359)||(35412689-35412753)
chr3 (298-360)||(3292909-3292970)
chr3 (224-258)||(16243286-16243320)
chr3 (295-373)||(22783782-22783859)
chr3 (295-373)||(22788146-22788223)
chr3 (298-360)||(22993646-22993708)
chr3 (221-258)||(28265112-28265149)
chr3 (226-258)||(3839930-3839962)
chr3 (120-160)||(49743785-49743825)
chr3 (295-359)||(54461194-54461258)
[»] chr1 (40 HSPs)
chr1 (295-393)||(2405605-2405703)
chr1 (120-258)||(21019228-21019367)
chr1 (295-390)||(45941512-45941607)
chr1 (120-258)||(2404722-2404870)
chr1 (295-389)||(21107225-21107319)
chr1 (295-389)||(21111092-21111186)
chr1 (295-389)||(21114432-21114526)
chr1 (295-393)||(21018397-21018495)
chr1 (295-393)||(41058232-41058330)
chr1 (295-360)||(2794323-2794388)
chr1 (120-258)||(21108245-21108393)
chr1 (295-360)||(673033-673098)
chr1 (295-360)||(20398949-20399014)
chr1 (295-360)||(28111152-28111217)
chr1 (242-299)||(41058953-41059010)
chr1 (120-258)||(42021721-42021871)
chr1 (297-360)||(27536494-27536557)
chr1 (297-360)||(31204936-31204999)
chr1 (297-360)||(37183826-37183889)
chr1 (119-201)||(41059152-41059235)
chr1 (295-361)||(905647-905713)
chr1 (295-360)||(3796789-3796854)
chr1 (295-360)||(49498460-49498525)
chr1 (298-362)||(45960705-45960769)
chr1 (295-346)||(1950432-1950483)
chr1 (242-289)||(21108144-21108191)
chr1 (295-358)||(23021888-23021951)
chr1 (119-189)||(45961638-45961708)
chr1 (242-299)||(2404924-2404981)
chr1 (121-189)||(27537144-27537212)
chr1 (142-201)||(29644227-29644286)
chr1 (297-357)||(6070919-6070979)
chr1 (242-293)||(21019122-21019173)
chr1 (295-360)||(29643184-29643249)
chr1 (120-189)||(2793299-2793368)
chr1 (298-360)||(27355650-27355711)
chr1 (303-360)||(13430920-13430977)
chr1 (304-369)||(34732314-34732379)
chr1 (120-157)||(49147113-49147150)
chr1 (226-258)||(41059064-41059096)
[»] scaffold0015 (2 HSPs)
scaffold0015 (295-392)||(198241-198338)
scaffold0015 (142-201)||(197264-197323)
[»] chr8 (47 HSPs)
chr8 (295-390)||(20887626-20887721)
chr8 (297-389)||(5584330-5584422)
chr8 (120-258)||(12582218-12582366)
chr8 (295-392)||(12583099-12583199)
chr8 (295-360)||(12516415-12516480)
chr8 (295-360)||(16953868-16953933)
chr8 (298-387)||(22173859-22173948)
chr8 (295-393)||(5980244-5980341)
chr8 (120-250)||(5981083-5981220)
chr8 (119-201)||(45156837-45156919)
chr8 (295-360)||(10663990-10664055)
chr8 (295-360)||(14421837-14421902)
chr8 (295-360)||(25231172-25231237)
chr8 (295-360)||(38248362-38248427)
chr8 (242-293)||(12582420-12582471)
chr8 (297-360)||(18825850-18825913)
chr8 (298-361)||(25591441-25591504)
chr8 (297-360)||(36710599-36710662)
chr8 (295-361)||(25594619-25594685)
chr8 (295-369)||(45155223-45155297)
chr8 (242-299)||(5980964-5981021)
chr8 (295-360)||(10498177-10498242)
chr8 (295-360)||(23619327-23619392)
chr8 (295-344)||(33883329-33883378)
chr8 (142-198)||(5540917-5540973)
chr8 (142-201)||(14420886-14420945)
chr8 (295-346)||(18721258-18721309)
chr8 (297-360)||(18824357-18824420)
chr8 (120-183)||(18826771-18826834)
chr8 (120-200)||(30640505-30640587)
chr8 (303-369)||(23643919-23643985)
chr8 (196-258)||(17895369-17895433)
chr8 (295-360)||(17931072-17931137)
chr8 (295-360)||(21279732-21279797)
chr8 (297-360)||(14589584-14589647)
chr8 (295-346)||(44027070-44027121)
chr8 (295-356)||(13196948-13197009)
chr8 (295-360)||(31284765-31284830)
chr8 (295-360)||(33419747-33419812)
chr8 (119-201)||(19792925-19793009)
chr8 (309-390)||(30785025-30785108)
chr8 (144-202)||(25228039-25228096)
chr8 (295-348)||(2560644-2560697)
chr8 (295-346)||(8911740-8911791)
chr8 (295-373)||(5613668-5613745)
chr8 (120-184)||(10663011-10663075)
chr8 (295-359)||(5538737-5538801)
[»] scaffold0080 (2 HSPs)
scaffold0080 (295-393)||(27203-27301)
scaffold0080 (143-202)||(26277-26336)
[»] scaffold0007 (1 HSPs)
scaffold0007 (295-393)||(248612-248710)
[»] chr6 (48 HSPs)
chr6 (295-388)||(30655540-30655633)
chr6 (119-260)||(28666044-28666177)
chr6 (118-258)||(10289184-10289334)
chr6 (295-389)||(20185840-20185934)
chr6 (295-389)||(22150057-22150151)
chr6 (295-388)||(17106545-17106638)
chr6 (295-390)||(5738012-5738112)
chr6 (295-393)||(10290068-10290166)
chr6 (295-393)||(23842729-23842826)
chr6 (296-393)||(23847865-23847965)
chr6 (295-373)||(9839345-9839422)
chr6 (119-201)||(9953035-9953117)
chr6 (295-360)||(11402353-11402418)
chr6 (295-361)||(9954059-9954125)
chr6 (295-360)||(2379326-2379391)
chr6 (242-299)||(10289388-10289445)
chr6 (295-360)||(14281483-14281548)
chr6 (295-360)||(24400275-24400340)
chr6 (295-360)||(24410394-24410459)
chr6 (297-360)||(26942398-26942461)
chr6 (295-360)||(3596744-3596809)
chr6 (295-360)||(4512572-4512637)
chr6 (295-360)||(6513352-6513417)
chr6 (295-360)||(13005285-13005350)
chr6 (295-360)||(18855988-18856053)
chr6 (295-360)||(19476098-19476163)
chr6 (295-360)||(22561126-22561191)
chr6 (295-360)||(23384715-23384780)
chr6 (295-360)||(26896222-26896287)
chr6 (295-346)||(13947114-13947165)
chr6 (242-293)||(28665920-28665971)
chr6 (298-360)||(7128398-7128460)
chr6 (295-361)||(32109764-32109830)
chr6 (295-360)||(2372349-2372414)
chr6 (295-360)||(24155329-24155394)
chr6 (307-360)||(28107750-28107803)
chr6 (295-358)||(11125662-11125725)
chr6 (154-201)||(13004434-13004481)
chr6 (338-388)||(11729277-11729327)
chr6 (242-294)||(22561782-22561834)
chr6 (295-361)||(1125697-1125763)
chr6 (141-190)||(20181294-20181343)
chr6 (141-190)||(22154648-22154697)
chr6 (295-346)||(28230690-28230742)
chr6 (298-369)||(2846403-2846474)
chr6 (119-157)||(12987037-12987075)
chr6 (312-388)||(23008174-23008250)
chr6 (312-388)||(23780114-23780190)
[»] scaffold1755 (1 HSPs)
scaffold1755 (295-393)||(215-313)
[»] scaffold0520 (4 HSPs)
scaffold0520 (120-258)||(4723-4880)
scaffold0520 (295-393)||(8149-8247)
scaffold0520 (295-393)||(1479-1576)
scaffold0520 (243-299)||(4631-4687)
[»] scaffold1809 (1 HSPs)
scaffold1809 (307-393)||(171-257)
[»] scaffold0757 (3 HSPs)
scaffold0757 (120-258)||(4563-4713)
scaffold0757 (295-393)||(5446-5544)
scaffold0757 (242-293)||(4767-4818)
[»] scaffold0270 (4 HSPs)
scaffold0270 (120-258)||(911-1060)
scaffold0270 (144-201)||(4339-4396)
scaffold0270 (144-201)||(11469-11526)
scaffold0270 (297-360)||(26-89)
[»] scaffold0381 (2 HSPs)
scaffold0381 (295-361)||(5360-5426)
scaffold0381 (120-201)||(6472-6554)
[»] scaffold0427 (1 HSPs)
scaffold0427 (295-360)||(3751-3816)
[»] scaffold0045 (1 HSPs)
scaffold0045 (297-360)||(89866-89929)
[»] scaffold0005 (2 HSPs)
scaffold0005 (142-201)||(246269-246328)
scaffold0005 (295-360)||(293117-293182)
[»] scaffold2073 (1 HSPs)
scaffold2073 (295-356)||(834-895)
[»] scaffold0690 (1 HSPs)
scaffold0690 (295-360)||(7675-7740)
[»] scaffold0412 (1 HSPs)
scaffold0412 (295-360)||(225-290)
[»] scaffold0250 (1 HSPs)
scaffold0250 (295-360)||(19490-19555)
[»] scaffold0126 (1 HSPs)
scaffold0126 (298-361)||(14281-14344)
[»] scaffold1785 (1 HSPs)
scaffold1785 (295-349)||(1-55)
[»] scaffold1208 (1 HSPs)
scaffold1208 (295-361)||(279-345)
[»] scaffold0191 (1 HSPs)
scaffold0191 (295-361)||(4010-4076)
[»] scaffold0035 (2 HSPs)
scaffold0035 (295-349)||(62611-62665)
scaffold0035 (295-360)||(63953-64018)
[»] scaffold0321 (1 HSPs)
scaffold0321 (295-360)||(2968-3033)
[»] scaffold0009 (1 HSPs)
scaffold0009 (298-360)||(241597-241659)
[»] scaffold1993 (1 HSPs)
scaffold1993 (120-201)||(1045-1126)
[»] scaffold0066 (1 HSPs)
scaffold0066 (295-360)||(57552-57617)
[»] scaffold0048 (1 HSPs)
scaffold0048 (295-360)||(15506-15571)
[»] scaffold0084 (2 HSPs)
scaffold0084 (295-360)||(19374-19439)
scaffold0084 (295-360)||(29459-29524)
[»] scaffold1063 (1 HSPs)
scaffold1063 (295-359)||(2595-2659)
[»] scaffold0065 (1 HSPs)
scaffold0065 (295-343)||(58661-58709)
[»] scaffold0218 (1 HSPs)
scaffold0218 (295-346)||(10503-10554)
[»] scaffold0038 (1 HSPs)
scaffold0038 (295-346)||(31188-31240)
[»] scaffold0962 (1 HSPs)
scaffold0962 (295-359)||(3246-3310)


Alignment Details
Target: chr2 (Bit Score: 157; Significance: 3e-83; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 13136654 - 13136906
Alignment:
Q  12 tcatcactctagatccttctaaaaacacgacttcatctaatataacatggcctattttattataatggaactatcttgattcattacattttcacattac 111  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  13136654 tcatcaatctagatccttctaaaaacacgacttcatctaatataacatggcctattttattatgatggacctatcttgattcattacattttcatattac 13136753  T
Q  112 atgtttcctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagc---------agcaagaaaaa 202  Q
    ||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||| |||||||||||         |||||||||||    
T  13136754 atgtttcctaatgacagtcagtcatttgttatttttagagtcattttatgatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaaaaa 13136853  T
Q  203 actgaagaagctg-aaaaaggcatcgtgtcacgattactgaaaaacgtgacac 254  Q
    ||||||||||||| ||||| |||| |||||| |||||||||||||| ||||||    
T  13136854 actgaagaagctgaaaaaaagcattgtgtcatgattactgaaaaacatgacac 13136906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 43722904 - 43723035
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaaa 219  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43722904 tgatgacagtcaatcattcgttatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaaa 43723003  T
Q  220 ag-gcatcgtgtcacgattactgaaaaacgtg 250  Q
    || |||||||||||||||||||||||||||||    
T  43723004 agagcatcgtgtcacgattactgaaaaacgtg 43723035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 242 - 374
Target Start/End: Original strand, 13136964 - 13137096
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaatatgtgcagtataccaattagggaaacatagatgattcgaaa 341  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  13136964 aaaaacgtgacacgattatggaaaccctaatttgggtgatttgttagacaaggaagaataggtgtagtataccaattaggggaacatagatgattcgaaa 13137063  T
Q  342 gacctgatttcatctctcttcatatcttctaac 374  Q
    |||||||| |||||||||||||||| |||||||    
T  13137064 gacctgatctcatctctcttcatattttctaac 13137096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 6825974 - 6826114
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctg--aa 217  Q
    ||||||||||||||||||  |||| |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||  ||    
T  6825974 tgatgacagtcaatcattcgttatatttaaagtctttttatgatatttttgagttcacaagcaagattaagcatcaagaaaaaactgaagaagatgaaaa 6826073  T
Q  218 aaaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  6826074 aaaggcatcgtgtcacgattactgaaaaacgtaacacgatt 6826114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 119 - 255
Target Start/End: Original strand, 5104952 - 5105086
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaa 218  Q
    ||||||||||||| ||||| | |  ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  5104952 ctgatgacagtcagtcattcact--ttttagagtttttttatgatatttttgagttcacaagcaagattaagcagcaag-aaaaactgaagaagctgaaa 5105048  T
Q  219 aa-ggcatcgtgtcacgattactgaaaaacgtgacacg 255  Q
    || || ||||||||||||||||||||||||||||||||    
T  5105049 aaggggatcgtgtcacgattactgaaaaacgtgacacg 5105086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 40781548 - 40781643
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  40781548 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 40781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 5666594 - 5666691
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  5666594 aagaatatgtgcagtataccaattaggggaacatagat-attcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 5666691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 43723776 - 43723874
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  43723776 aagaataggtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 43723874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 3874482 - 3874630
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagc---------agcaagaaaaaactgaaga 210  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||         |||||||||||| ||||||    
T  3874482 tgatgacagtcagtcattcattatttttagagtctttttaggatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaaaaaattgaaga 3874581  T
Q  211 agctgaaaaa-ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    | |||||||| |||||||||||||||||| ||||||||||| |||||||    
T  3874582 aactgaaaaagggcatcgtgtcacgattattgaaaaacgtgtcacgatt 3874630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 31585969 - 31585874
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  31585969 aagaatagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 31585874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 13971923 - 13971830
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||    
T  13971923 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatatcatctctcttcatattttctaaccaaatctacatttt 13971830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 307 - 390
Target Start/End: Original strand, 15470546 - 15470629
Alignment:
Q  307 agtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  15470546 agtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 15470629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 392
Target Start/End: Original strand, 6826850 - 6826944
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaa 392  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||    
T  6826850 aataggtgcagtataccaattaggggagcatagatgattcgaaagacctgatctcatctatcttcatattttctaaccaaatctatattttctaa 6826944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 13972813 - 13972732
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  13972813 tgatgacagtcaatcattcgttatttttagagtctttttatgatatttttgagttcacaaacaagattaagcagcaagaaaa 13972732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 43207919 - 43207826
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| | ||||| |||||||||||||    
T  43207919 aagaatagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatatttcctaaccaaatctatatttt 43207826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 10599951 - 10600051
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaaa 219  Q
    |||||||||||| ||||| | |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||   ||| ||||||||||    
T  10599951 tgatgacagtcagtcattcactatttttagaatctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaagctgaaaa 10600050  T
Q  220 a 220  Q
    |    
T  10600051 a 10600051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 388
Target Start/End: Original strand, 5105805 - 5105896
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||| |||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||| ||||||| |||||| ||||||    
T  5105805 gaataggtgcagtataccaattaggggaacatagataatttgaaagacctgatctcatctctcttcatattttctaaccaaatctttatttt 5105896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 9185453 - 9185388
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  9185453 aagaatatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 9185388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 42368740 - 42368647
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| |||||| |||||| |||||||||||| | |||||||||||||| ||||||| |||||||| ||||    
T  42368740 aagaataggtgcagtataccaattaggggaacataaatgatttgaaagacctgatcttatctctcttcatattttctaaccaaatctatttttt 42368647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 5665830 - 5665905
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagca 195  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  5665830 tgatgacagtcaatcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagca 5665905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 25959717 - 25959651
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  25959717 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctt 25959651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 9188681 - 9188616
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  9188681 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 9188616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 29440571 - 29440636
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  29440571 aagaataggtgcagtataccaattagggaaacatagatgactcgaaagacctgatctcatctctct 29440636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 37279705 - 37279640
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  37279705 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 37279640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 6826168 - 6826225
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  6826168 aaaaacgtgacacaattatggaaaccctaatttgggtggtttgttacacaaggaagaa 6826225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 22021144 - 22021209
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  22021144 aagaataggtgcagtataccaattagggtaacatagatgattcgaaagaccttatctcatctctct 22021209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 25874257 - 25874322
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  25874257 aagaataggtgtagtataccaattagggaaacatagatgactcgaaagacctgatctcatctctct 25874322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 45493185 - 45493120
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  45493185 aagaataggtgcagtataccaattagggaaacatagatgactcgaaaaacctgatctcatctctct 45493120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 45500927 - 45500862
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  45500927 aagaataggtgcagtataccaattagggaaacatagatgactcgaaaaacctgatctcatctctct 45500862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 31427568 - 31427505
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  31427568 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 31427505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 1386451 - 1386386
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  1386451 aagaataagtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 1386386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 8888712 - 8888777
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||    
T  8888712 aagaataggtgcagtataccaattaggggaacatagatgatttgaaagacctaatctcatctctct 8888777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 11347924 - 11347863
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatct 356  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  11347924 aagaatagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatct 11347863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 12219872 - 12219937
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  12219872 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 12219937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 24235172 - 24235233
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatct 356  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  24235172 aagaataggtgcagtataccaattaggggaacatagataattcgaaagacctgatctcatct 24235233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 24238444 - 24238505
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatct 356  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  24238444 aagaataggtgcagtataccaattaggggaacatagataattcgaaagacctgatctcatct 24238505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 25138960 - 25138895
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||||||||||||||| || ||| |||||||||||||||| ||||||||||    
T  25138960 aagaataggtgcagtataccaattagggaaatatcgataattcgaaagacctgatctcatctctct 25138895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 25870860 - 25870925
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||| || ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  25870860 aagaataggtgtagcataccaattagggaaacatagatgactcgaaagacctgatctcatctctct 25870925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 38014636 - 38014705
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    |||||||||||| ||||||  |||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  38014636 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaa 38014705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 33310752 - 33310808
Alignment:
Q  304 tgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  33310752 tgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 33310808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 3875363 - 3875414
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  3875363 aagaatatgtgcagtataccaattaggggaacataggtgattcgaaagacct 3875414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 5666058 - 5666109
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  5666058 aaaaacgtgacacgattatggaaaccctaatttaggtggtttgttacacaag 5666109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 45457240 - 45457303
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||| ||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  45457240 gaataggtgcagtataacaattaggggaacttagatgattcgaaagacctgatctcatctctct 45457303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 16790783 - 16790721
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  16790783 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 16790721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 30274797 - 30274731
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||| || | |||||||||||    
T  30274797 aagaataggtgcagtataccaattaggagaacatagatgattcgaaagacatgctctcatctctctt 30274731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 31430639 - 31430569
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    ||||||||||| | ||||||  |||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  31430639 ctgatgacagttagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaa 31430569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 3874684 - 3874741
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  3874684 aaaaacgtgacatgattatggaaaccctaattttggtggtttgttacacaaggcagaa 3874741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 9966398 - 9966333
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||| |||||||||||||| |||||||||||||| |||||| |||| ||||||||||    
T  9966398 aagaataggtgcaatataccaattaggggaacatagatgattcaaaagacttgatctcatctctct 9966333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 16788389 - 16788469
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| ||||||  |||||||||| |||||| |||||| |||||| |||||||||||| ||||||| ||||||||    
T  16788389 tgatgacagtcagtcatttgctatttttagaatctttt-atgataattttgagttcacaagcaagcttaagcaacaagaaaa 16788469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 27266865 - 27266930
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||  |||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  27266865 aagaatagctgcattataccaattaggggaacatagatgatttgaaagacctgatctcatctctct 27266930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 30926621 - 30926713
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttcta 391  Q
    |||| |||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||  |||| ||||||  |||||| || ||||||    
T  30926621 aataggtgcagtatatcaattagggaaacc-agaggattcgaaagacctgatttcatctctctctatattttctaatcaaatctttactttcta 30926713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 40259168 - 40259103
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |  ||||||||||    
T  40259168 aagaataggtgcagtataccaattaggggaacatagatgattcgaacgacctaaactcatctctct 40259103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 16179203 - 16179254
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  16179203 aagaatatatgcagtataccaattaggggaacatcgatgattcgaaagacct 16179254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 38015597 - 38015660
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| || ||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  38015597 gaataggttcagtatatcaattaggggaacatcgatgattcgaaagacctgatctcatctctct 38015660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 45453952 - 45454015
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| ||||| |||||||||||| ||||| || ||||||||||||||||||| ||||||||||    
T  45453952 gaataggtgcattataccaattagagaaacttatatgattcgaaagacctgatctcatctctct 45454015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 22630917 - 22630982
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||||||||| || |||||| |||||||||||||||| |  ||||||||||    
T  22630917 aagaataggtgcagtataccaattaagggaacataaatgattcgaaagacctaaactcatctctct 22630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 37937248 - 37937183
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||| ||||||||||||||| ||||| ||||||||||||||||| |  ||||||||||    
T  37937248 aagaataggtgcggtataccaattaggggaacatcgatgattcgaaagacctaaactcatctctct 37937183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 5105124 - 5105180
Alignment:
Q  243 aaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||  |||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  5105124 aaaacgtagcacgattatggaaaccctaattttggttgtttgttacacaaggaagaa 5105180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 25820875 - 25820811
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||  | |||||||||    
T  25820875 aagaataggtgcagtatatcaattaggggaacatcgatgattcgaaagacctagtctcatctctc 25820811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 43723098 - 43723154
Alignment:
Q  243 aaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||| |||| ||||    
T  43723098 aaaacgtgacacaattatgggaaccctaatttgggtggtttgttacagaaggcagaa 43723154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 13972717 - 13972656
Alignment:
Q  199 aaaaactgaagaagctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||||||||||| ||||||||  || ||||||||| |||||||| ||||||||||||||||    
T  13972717 aaaaactgaagaaactgaaaaaaggggatcgtgtcatgattactggaaaacgtgacacgatt 13972656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 25873203 - 25873272
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaa 189  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||| |||||| |||||||||||| ||||    
T  25873203 tgatgacagtcagtcattcactatttttagagtctttttcatgata-ttttgagttcacaagcaagtttaa 25873272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 36808471 - 36808397
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatctt 369  Q
    ||||||| ||||||| |||||||||||| ||| || | |||| |||||||||||| |||||||||| | ||||||    
T  36808471 aagaataggtgcagtgtaccaattaggggaacttaaaggatttgaaagacctgatctcatctctctccttatctt 36808397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 13972602 - 13972551
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||| |||||| |||||||||| | |||||| ||||||||||||||||||    
T  13972602 aaaaacatgacacaattatggaaatcctaatttaggtggtttgttacacaag 13972551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 25869835 - 25869904
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaa 189  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||| |||||| |||||||| ||| ||||    
T  25869835 tgatgacagtcagtcattcactatttttagagtctttttcatgata-ttttgagttcacaagaaagtttaa 25869904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 25140016 - 25139971
Alignment:
Q  144 ttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    ||||||||| |||||||||||||||||| |||||||| ||| ||||    
T  25140016 ttttagagtttttttatgatatttttgagttcacaagtaagcttaa 25139971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 26366010 - 26366074
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| || || |||||||||||||| ||||||||| |||| ||||||||  | |||||||||    
T  26366010 aagaataggtacactataccaattaggggaacatagataattcaaaagacctagtctcatctctc 26366074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 40780658 - 40780698
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttat 160  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  40780658 tgatgacagtcaatcattcgctatttttagagtctttttat 40780698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 4e-45; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 30065562 - 30065702
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagc-tgaaa 218  Q
    |||||||| ||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||    
T  30065562 tgatgacaatcattcattcgttatttttagagtctttttatgatatttttgaattcacaagcaagattaagcaacaagaaaaaactgaaaaagcttaaaa 30065661  T
Q  219 aaggcatcgtgtcacgattact-gaaaaacgtgacacgatt 258  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  30065662 aaggcatcgtgtcacgattactaaaaaaacgtgacacgatt 30065702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 2836702 - 2836819
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaaaa--ggcatcgtgtcacgattac 239  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||||||||| ||||||||||||| ||||||||  || ||||||||||||||||    
T  2836702 atttttagagtctttttatgatatttttgagttcacaagcaaacttaagcagcaag-aaaaactgaagaaactgaaaaaagggaatcgtgtcacgattac 2836800  T
Q  240 tgaaaaacgtgacacgatt 258  Q
    ||||||||||| |||||||    
T  2836801 tgaaaaacgtgtcacgatt 2836819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 41876792 - 41876699
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  41876792 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 41876699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 7271110 - 7271204
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||||    
T  7271110 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatttctcttcatattttctaaccaaatctatattttc 7271204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 30066403 - 30066497
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  30066403 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctcttttcatattttctaaccaaatctatattttc 30066497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 33552215 - 33552309
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||||||    
T  33552215 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatcactcttcatatattctaaccaaatctatattttc 33552309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 39191333 - 39191413
Alignment:
Q  122 atgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaa 202  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  39191333 atgacagtcaatcatttgttatttttagagtctttttatgatacttttgagttcacaagcaagcttaagcagcaagaaaaa 39191413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 28788401 - 28788252
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga---------aaaaactgaaga 210  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||         |||| |||||||    
T  28788401 tgatgacagtcagtcatttgctatttttagagtctttttatgatattttttagttcacaagcaagcttaagcagcaagaaaaacaagaaaaatctgaaga 28788302  T
Q  211 agctgaaa--aaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    | ||||||  | |||||||||||| ||||||||||||||||| |||||||    
T  28788301 aactgaaaagagggcatcgtgtcatgattactgaaaaacgtgtcacgatt 28788252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 39192424 - 39192522
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||||| |||| ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||| || |||| ||||||||||||||||||    
T  39192424 aagaatacgtgcattatatcaattaggggaacattgatgattcgaaagatctgatctcatctctcttcatattttgtaaccaaatctatattttctaac 39192522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 7270241 - 7270377
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaag-aaaaaactgaagaagctgaaa 218  Q
    |||||||||||  |||||   ||||||||||||||||||||||||||||||| |||||||||||||  ||    |||| |||||||||||||| ||||||    
T  7270241 tgatgacagtctgtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagaaaaa----caagaaaaaaactgaagaaactgaaa 7270336  T
Q  219 aa-ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    || ||||||||||||| |||| ||||||| ||| |||||||    
T  7270337 aagggcatcgtgtcactattattgaaaaatgtgtcacgatt 7270377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 18031731 - 18031850
Alignment:
Q  141 tatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaagaagctgaaaaa--ggcatcgtgt 230  Q
    |||||||||||||||||||||||||||| || |||| ||||||| |||||||||||||        ||||||||||||| ||||||||  || |||||||    
T  18031731 tatttttagagtctttttatgatattttcgagttcaaaagcaagtttaagcagcaagaaaagcaagaaaaactgaagaaactgaaaaaatggaatcgtgt 18031830  T
Q  231 cacgattactgaaaaacgtg 250  Q
    ||||||||||||||||||||    
T  18031831 cacgattactgaaaaacgtg 18031850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 34831858 - 34831953
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| ||||| |||||||||||||| |||  ||| |||||||||||||| || |||||||||||||||| ||||||| |||||||||||||||    
T  34831858 aagaataggtgcattataccaattaggggaactcagaagattcgaaagacctaatctcatctctcttcatattttctaaccaaatctatattttct 34831953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 4100413 - 4100284
Alignment:
Q  144 ttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaa--------aaaactgaagaagctg-------aaaaaggcatcgt 228  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||        |||||||||||| |||       ||||||| |||||    
T  4100413 ttttagagtctttttatgatatttttgagttcacaggcaagattaagcagcaagaaaagcaaggaaaactgaagaaactgaagaaaaaaaaagggatcgt 4100314  T
Q  229 gtcacgattactgaaaaacgtgacacgatt 258  Q
    |||||||||||| |||||||||||||||||    
T  4100313 gtcacgattactcaaaaacgtgacacgatt 4100284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 4099545 - 4099452
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||| |||||||  ||||| ||||||    
T  4099545 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctagtctcatctttcttcatattttctaaccgaatctttatttt 4099452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 21332708 - 21332643
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  21332708 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 21332643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 22131326 - 22131419
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||| |||| | | ||||| ||||||||    
T  22131326 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctccatattttcttaatcaatctttattttct 22131419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 32837105 - 32837164
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  32837105 atttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 32837164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 37214788 - 37214847
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  37214788 atttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 37214847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 40916889 - 40916739
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt---atgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaa 208  Q
    |||||||||||| ||||||  ||||||||||||||||||   || |||||||||| |||||||||||| ||||||| |||||        |||||| |||    
T  40916889 tgatgacagtcagtcatttgctatttttagagtcttttttttatcatatttttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaaccgaa 40916790  T
Q  209 gaagctgaaaaa-ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||| |||||||| || ||||||||||||||||||||||| ||| |||||||    
T  40916789 gaaactgaaaaaggggatcgtgtcacgattactgaaaaatgtgtcacgatt 40916739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 22938032 - 22937974
Alignment:
Q  143 tttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  22938032 tttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 22937974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 30065756 - 30065813
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  30065756 aaaaacgtgacacggttatggaaaccctaatttgggtggtttgttacacaaggaagaa 30065813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 43490793 - 43490874
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||  ||||||   |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  43490793 tgatgacagtctgtcatttcacatttttagagtctttttatgatatttttgagttcacaaacaagcttaagcagcaagaaaa 43490874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 21828043 - 21827959
Alignment:
Q  118 cctgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||| |||||   |||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  21828043 cctgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcgcaagcaagcttaagcagcaagaaaa 21827959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 21336742 - 21336660
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| ||||| | |||||||||||||||||| || |||||||||| |||||||||||| ||||||| ||||||||    
T  21336742 tgatgacagtcagtcattcactatttttagagtcttttttattatatttttgagttcacaagcaagcttaagcaacaagaaaa 21336660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 4100230 - 4100173
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  4100230 aaaaacgtgacacgattatgcaaaccctaattttggtggtttgttacacaaggaagaa 4100173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 12058520 - 12058455
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  12058520 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 12058455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 12088052 - 12088117
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  12088052 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 12088117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 14017036 - 14016967
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    |||||||||||| ||||||  |||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  14017036 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaa 14016967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 296 - 361
Target Start/End: Original strand, 17664646 - 17664711
Alignment:
Q  296 agaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    |||||| |||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||    
T  17664646 agaataggtgcagtataccaattaggggaacatagataattcaaaagacctgatctcatctctctt 17664711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 18952787 - 18952852
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||  |||| ||||||||||    
T  18952787 aagaatatgtgcagtataccaattaggggaacatagatgatttgaaagatttgatctcatctctct 18952852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 20055868 - 20055933
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| || |||| |||||    
T  20055868 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctcatctcatatctct 20055933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 26752721 - 26752664
Alignment:
Q  303 gtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  26752721 gtgcagtataccaattaggggaacataaatgattcgaaagacctgatctcatctctct 26752664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 26895632 - 26895567
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||  ||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  26895632 aagaataggtgcaacataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 26895567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 26907483 - 26907418
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  26907483 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 26907418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 34133011 - 34132946
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  34133011 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 34132946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 34143242 - 34143177
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  34143242 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 34143177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 42063016 - 42063080
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||  | |||||||||    
T  42063016 aagaataggtgcagtataccaattagggaaacatagatgattcaaaagacctagtctcatctctc 42063080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 14016164 - 14016101
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  14016164 gaataggtgcactataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 14016101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 11959206 - 11959140
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||||||||| |  |||||||||||    
T  11959206 aagaataggtgcggtataccaattaggggaacatagatgattcgaaagacctaaactcatctctctt 11959140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 41306552 - 41306490
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||| ||| | ||||||||    
T  41306552 aataggtgcagtataccaattaggggaacatagatgattcgaaagacccgatcttatctctct 41306490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 23044236 - 23044301
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||||||| |  ||||||||||    
T  23044236 aagaataggtgcagtataccaattaggggaacatagatgattcaaaagacctaaactcatctctct 23044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 31863809 - 31863874
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||  | ||||||||||    
T  31863809 aagaataggtgcagtatatcaattaggggaacatagatgattcgaaagacctagtctcatctctct 31863874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 37215139 - 37215203
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||| |||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  37215139 aagaataggtgcaatataccaattagggaa-cttagatgattcgaaagacctaatttcatctctct 37215203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 21335726 - 21335662
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||| || | |||||||||    
T  21335726 aagaataggtgcagtatacaaattaggggaacatagatgattcgaaagacttggtctcatctctc 21335662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 43491859 - 43491915
Alignment:
Q  304 tgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  43491859 tgcaatataccgattaggggaacatagatgattcgaaagacctgatctcatctctct 43491915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 259
Target Start/End: Complemental strand, 2837641 - 2837526
Alignment:
Q  154 tttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa--------aactgaagaagctgaaaaa--ggcatcgtgtcacgattactgaa 243  Q
    ||||||||||||||| || |||||||||||| ||||||||||| ||||        |||||||||| ||||| ||  || ||| ||||||||||||||||    
T  2837641 tttttatgatattttggagttcacaagcaagcttaagcagcaataaaagcaagaaaaactgaagaaactgaagaaagggaatcatgtcacgattactgaa 2837542  T
Q  244 aaacgtgacacgatta 259  Q
    ||||||| ||||||||    
T  2837541 aaacgtgtcacgatta 2837526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 33551415 - 33551482
Alignment:
Q  192 agcaagaaaaaactgaagaagctgaaaaaggc-atcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    |||||||||||||| |||||  |||||||||  ||||||||||||||||||||||||||| |||||||    
T  33551415 agcaagaaaaaactaaagaaagtgaaaaaggggatcgtgtcacgattactgaaaaacgtgtcacgatt 33551482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 33551536 - 33551587
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    ||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  33551536 aaaaaagtgacacgattatgaaaaccctaatttgggtggtttgttacacaag 33551587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 7625200 - 7625262
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| ||| |||||||||||||||| ||||| ||||||| |||||||||||| ||||||||||    
T  7625200 aataggtgtagtataccaattaggggaacatcgatgatttgaaagacctgatctcatctctct 7625262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 17747616 - 17747686
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||| |||||| |||| ||| ||| ||||    
T  17747616 ctgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcataagaaagcttaa 17747686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 22936965 - 22936901
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||||||||||  | |||||||||    
T  22936965 aagaataggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 22936901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 7270431 - 7270482
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    ||||||||||||||||||| |||||  |||||| ||||||||||||||||||    
T  7270431 aaaaacgtgacacgattatagaaactctaatttaggtggtttgttacacaag 7270482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 18031912 - 18031963
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    ||||||||||||||||| |||||||| ||||||  |||||||||||||||||    
T  18031912 aaaaacgtgacacgattgtggaaaccctaatttcagtggtttgttacacaag 18031963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 40583343 - 40583409
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||||  ||||| || |||||||||||||| |  |||||||||||    
T  40583343 aagaataggtgcagtataccaattaggagaacatcgaggattcgaaagacctaaactcatctctctt 40583409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 359
Target Start/End: Complemental strand, 14375820 - 14375759
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    |||| |||||||||||||||||||| ||||| ||||| |||||||||||  | |||||||||    
T  14375820 aataggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 14375759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 17663965 - 17664019
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaa 296  Q
    ||||||||||||| |||    ||||| ||||||||||||||||||||||||||||    
T  17663965 aaaaacgtgacacaatttcataaaccctaatttgggtggtttgttacacaaggaa 17664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 17748537 - 17748599
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||| ||||||||||||||| ||||||||||||||| |||| || |  ||||||||||    
T  17748537 aataggtgcggtataccaattaggggaacatagatgattcggaagatctaaactcatctctct 17748599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 25329456 - 25329505
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatattttt 169  Q
    |||||||||||| |||||   |||||||||||| ||||||||||||||||    
T  25329456 tgatgacagtcagtcattcgctatttttagagtttttttatgatattttt 25329505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 26292885 - 26292930
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaa 340  Q
    ||||||| |||||||||||||||||| | | |||||||||||||||    
T  26292885 aagaataggtgcagtataccaattagaggagcatagatgattcgaa 26292930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28442181 - 28442105
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | ||||||||| ||| |||| |||||||||| || |||||||||||| |||| ||||||    
T  28442181 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaa 28442105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 18240202 - 18240150
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaagg 294  Q
    ||||| ||||||||||| |||||||| |||||||||||  |||||||| ||||    
T  18240202 aaaaatgtgacacgattctggaaaccctaatttgggtgacttgttacataagg 18240150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 4694723 - 4694871
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagc---------aagaaaaaactgaaga 210  Q
    |||||| ||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||         ||||||||||||||||    
T  4694723 tgatgaaagtcagtcatttgttatttttagagtctttctatgatatttttgagttcacaagcaagattaagcagcaagaaaagtaagaaaaaactgaaga 4694822  T
Q  211 agctg-aaaaaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4694823 agctgaaaaaaggcatcgtgtcacgattactgaaaaacgtgacacgatt 4694871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 4596042 - 4595944
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  4596042 aagaatatgtgaagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 4595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 17730895 - 17730993
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  17730895 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagacatgatctcatctctcttcatattttctaaccaaatctatattttctaac 17730993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 26557580 - 26557674
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  26557580 aagaataggtgcagtataccaattagggaaacatagatgactcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 26557674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 11919898 - 11919803
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  11919898 aagaataggtgtagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 11919803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 45288138 - 45287989
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga---------aaaaactgaaga 210  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||         |||| |||||||    
T  45288138 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaagctgaaga 45288039  T
Q  211 agctgaaa--aaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    | ||||||  ||||||||||||||| |||||||||||||||| |||||||    
T  45288038 aactgaaaagaaggcatcgtgtcacaattactgaaaaacgtgtcacgatt 45287989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 4542878 - 4542971
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  4542878 aagaataggtgcagtataccaattaggggaacatagatgattcggaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 4542971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 4546950 - 4547043
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||||||    
T  4546950 aagaataggtgcagtatatcaattagggaaacatagatgattcgaaagacctgatctcatccctcttcatattttctaaccaaatctatatttt 4547043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 9865643 - 9865494
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaaga 210  Q
    ||||||||||||| |||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||        ||||||||||||    
T  9865643 ctgatgacagtcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaactgaaga 9865544  T
Q  211 agctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    |  |||||||   | ||||||||||||||| |||||||||||||||||||    
T  9865543 aaatgaaaaaagaggatcgtgtcacgattattgaaaaacgtgacacgatt 9865494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 8277067 - 8277162
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  8277067 aagaataggtgcattataccaattaggggaacatagatgcttcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 8277162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 4695562 - 4695656
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||    
T  4695562 aagaataggtgcagtataccaattaggggaatatagatgattcgaaagacctggtctcatctcttttcatattttctaactaaatctatattttc 4695656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 9271498 - 9271400
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||| ||||| | |||||||||||||||| ||||||| ||||||||||||||||||    
T  9271498 aagaataggtgcagtataccaattaggggaacatagatgattctaaatacctgttctcatctctcttcatattttctaaccaaatctatattttctaac 9271400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 20594344 - 20594430
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatct 381  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  20594344 aagaatacgtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatct 20594430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 45291474 - 45291392
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaa 202  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  45291474 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaa 45291392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 4596924 - 4596843
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||    
T  4596924 tgatgacagtcaatcattcgttatttttagagtctttttatgatatttttgagctcacaagaaagattaagcaacaagaaaa 4596843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 20081640 - 20081559
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| ||||| | |||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  20081640 tgatgacagtcagtcattcactatttttagagtgtttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 20081559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 23224938 - 23224873
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  23224938 aagaatatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 23224873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 9080376 - 9080525
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaagaa 211  Q
    |||||||||| | |||||  ||||||||||||||||||||||  |||||||| |||||||||||| |||||||||||||        |||||||||||||    
T  9080376 tgatgacagttagtcattcgttatttttagagtctttttatgtaatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaactgaagaa 9080475  T
Q  212 gctgaaaaa--ggcatcgtgtcacgatt-actgaaaaacgtgacacgatt 258  Q
     || |||||  ||||||||||||| ||| ||||||||||||| |||||||    
T  9080476 actaaaaaaagggcatcgtgtcactattaactgaaaaacgtgtcacgatt 9080525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 9864757 - 9864680
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaac 374  Q
    ||||| ||| ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  9864757 gaataggtgtagtataccaattagggatacatagatgatttgaaagacctgatctcatctctcttcatattttctaac 9864680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 17729973 - 17730054
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| || || | ||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  17729973 tgatgacagtcagtctttcactatttttagagtccttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 17730054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 37415456 - 37415391
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  37415456 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 37415391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 45287102 - 45287037
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  45287102 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagacctaatctcatctctct 45287037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 8276011 - 8276093
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||||||  |||||   ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  8276011 ctgatgacagtctgtcattccatatttttagagtctttttatgatatttttgagttcacaagcaagctcaagcagcaagaaaa 8276093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 14683477 - 14683411
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  14683477 aagaatagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctt 14683411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 45290513 - 45290448
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  45290513 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaatctcatctctct 45290448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 9132793 - 9132742
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9132793 aagaatatgtgcagtataccaattaggggaacatagatgattcgaaagacct 9132742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 35961172 - 35961277
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcga-------aagacctgatttcatctctcttcatatcttctaactaaatctatattt 387  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||       |||||||||| |||||||||||||||| || |||| | ||||||||||    
T  35961172 aagaataggtgcagtataccaattagaggaacatagatgattcgaaagtcgaaagacctgatctcatctctcttcatattttataaccacatctatattt 35961271  T
Q  388 tctaac 393  Q
    ||||||    
T  35961272 tctaac 35961277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 16165833 - 16165895
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  16165833 aataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 16165895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 4694925 - 4694982
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  4694925 aaaaacgtgacacaattatggaaaccctaatttgggtggtttcttacacaaggaagaa 4694982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 9865440 - 9865383
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  9865440 aaaaatgtgacacgattatggaaaccctaattttggtggtttgttacacaaggaagaa 9865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 10345276 - 10345341
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  10345276 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 10345341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 26136161 - 26136096
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  26136161 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 26136096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 26144541 - 26144476
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  26144541 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 26144476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 37166180 - 37166115
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||||||| | |||||||||||    
T  37166180 aagaataggtgcagtataccaattaggggaacataaatgattcgaaagacctaaattcatctctct 37166115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 10344637 - 10344697
Alignment:
Q  141 tatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||    
T  10344637 tatttttagagtcttcttatgaaatttttgagttcacaagcaagcttaagcagcaagaaaa 10344697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 2441309 - 2441246
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||  ||||| |||||||||||||||||||| ||||||||||    
T  2441309 gaataggtgcagtataccaattaggagaacatcgatgattcgaaagacctgatctcatctctct 2441246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 17730217 - 17730268
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17730217 aaaaacgtgacacgattatggaaaccctaatttaggtggtttgttacacaag 17730268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 9273833 - 9273779
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaa 296  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  9273833 aaaaacgtgacacgattacggaaaccctaatttgagtggtttgttacacaaggaa 9273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 20080752 - 20080702
Alignment:
Q  294 gaagaatatgtgcagtataccaattagggaaacatagatgattcgaaagac 344  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  20080752 gaagaataggtgcagtataccaattaggggaacatagatgattcgaaagac 20080702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 3068010 - 3067959
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  3068010 aagaataggtgcagtataacaattaggggaacatagatgattcgaaagacct 3067959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 356
Target Start/End: Original strand, 6603542 - 6603601
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatct 356  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||    
T  6603542 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacttgatctcatct 6603601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 9080579 - 9080630
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  9080579 aaaaacgtgacacaattatggaaaccctaatttgtgtggtttgttacacaag 9080630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 13449807 - 13449744
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| | ||| |||||||||||||||||| | ||||||||||    
T  13449807 gaataggtgcagtataccaattaggggaccatcgatgattcgaaagacctgttctcatctctct 13449744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 13842723 - 13842786
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| ||||||||||||||||| || || || |||||||||||||||||||| ||||||||||    
T  13842723 gaataggtgcagtataccaattacgggaatatcgatgattcgaaagacctgatctcatctctct 13842786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 9274034 - 9273953
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||  ||||||   ||||| | ||||||||||||||||||| || |||||||||||| ||||||| ||||||||    
T  9274034 tgatgacagtccgtcatttcacattttcaaagtctttttatgatattttggagttcacaagcaagcttaagcaccaagaaaa 9273953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 48645555 - 48645603
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaaga 343  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  48645555 aagaataggtgcagtataccaattaggggaacatcgatgattcgaaaga 48645603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 11398080 - 11398017
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| || ||||||||||||||||| ||||| ||||| ||||||||||| || ||||||||||    
T  11398080 gaataggtacagtataccaattaggggaacatcgatgaatcgaaagacctaatctcatctctct 11398017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 22620863 - 22620946
Alignment:
Q  18 ctctagatccttctaaaaacacgact--tcatctaatataacatggcctattttattataatggaactatcttgattcattacatt 101  Q
    ||||||||||||||||||||| ||||  || |||||||||||  || ||||| |||| ||||||| ||||||| ||||||||||||    
T  22620863 ctctagatccttctaaaaacatgactcatcctctaatataac--gggctattatattctaatggacctatcttaattcattacatt 22620946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 5242180 - 5242118
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| ||||||||||||||||| || |||  ||| ||||||||||||||||| ||||||||||    
T  5242180 aataggtgcagtataccaattaagggaactcagaagattcgaaagacctgatctcatctctct 5242118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 10469225 - 10469290
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||| ||| |||||||| |||||||||||||||||||| || |  ||||||||||    
T  10469225 aagaataggtgcagtgtactaattaggggaacatagatgattcgaaagatctaaactcatctctct 10469290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 4542074 - 4542150
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtc-tttttatgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | ||||||||| ||| |||| |||||| |||||| |||||||||||| |||| ||||||    
T  4542074 tgatgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaa 4542150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 10431386 - 10431462
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtc-tttttatgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | ||||||||| ||| |||| |||||| |||||| |||||||||||| |||| ||||||    
T  10431386 tgatgacagtcagtcattcactatttttagtgtcattttcatgata-ttttgagttcacaagcaagtttaaacagcaa 10431462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 7227613 - 7227704
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    |||| ||||||||||||||| |||| |||  ||| |||||||||||||||||  ||||||| | ||||| ||||||  |||||| || |||||    
T  7227613 aataggtgcagtataccaatcaggggaacc-agaggattcgaaagacctgatcccatctctttccatattttctaataaaatctttactttct 7227704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 9e-37; HSPs: 99)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 19827509 - 19827607
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  19827509 aagaatatgtgcattataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 19827607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 15445393 - 15445299
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  15445393 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 15445299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 52006559 - 52006461
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||    
T  52006559 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctggtctcatctctcttcatattttctaaccaaatctatattttctaac 52006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 119 - 258
Target Start/End: Original strand, 19819949 - 19820089
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgata-tttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaa 217  Q
    ||||||||||||| |||||   |||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||||| ||||||||||||| || ||    
T  19819949 ctgatgacagtcagtcattcgctatttttaaagtctttttatgatattttttgagttcacaagcaagattaagtagcaag-aaaaactgaagaaactaaa 19820047  T
Q  218 aaa-ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||| || ||||||||||||||||||||||||||| |||||||    
T  19820048 aaaggggatcgtgtcacgattactgaaaaacgtgtcacgatt 19820089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 40903111 - 40903014
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaa 392  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  40903111 aagaataggtgcagtataccaattaggggaacatagatgattctaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaa 40903014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 38283517 - 38283421
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttcta 391  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  38283517 aagaatagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttcta 38283421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 15429884 - 15429790
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| ||| |||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  15429884 aagaataggtgtagtataccaattaggggaacatagatgattcaaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 15429790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 15436498 - 15436404
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| ||| |||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  15436498 aagaataggtgtagtataccaattaggggaacatagatgattcaaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 15436404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 27677967 - 27677817
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaag--------aaaaaactgaag 209  Q
    ||||||||||||| | ||| | |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||        ||||||||||||    
T  27677967 ctgatgacagtcagttattcactatttttagagtcttttttatgatatttttgagttcacaatcaagattaagcagcaagaaaagcaaaaaaaactgaag 27677868  T
Q  210 aagctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    || ||||||||  || | |||||||||||||||||||||||||||||||||    
T  27677867 aaactgaaaaaaggggaccgtgtcacgattactgaaaaacgtgacacgatt 27677817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 40795096 - 40795194
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||| |||||||| |||||    
T  40795096 aagaataggtgtagtataccaattagggaaacatagatgattcgaaagacctgatcttatctctcttcatattttctaaccaaaactatatttcctaac 40795194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 44164876 - 44164970
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||| ||||||| ||||||||||||||    
T  44164876 aagaatatgtgtagtataccaattaggggaacatagatgattcgaaagacttgatctcatgtctcttcatattttctaaccaaatctatattttc 44164970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 49270773 - 49270868
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttcta 391  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||    
T  49270773 aagaatatgtgcagtataccaattaggagaatatagatgattcgaaaga-ctgatctcatctctcttcataatttctaactaaatctatattttcta 49270868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 53010459 - 53010376
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaa 202  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  53010459 ctgatgatagtcagtcattcattatttttagagtctttttatgatatttttgagttcacaagtaagattaagcagcaagaaaaa 53010376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 24044169 - 24044071
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||| |||||||||||||||| ||||||||| |||  ||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  24044169 aagaataggtgtagtataccaattaggggaacatagataatttcaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 24044071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 27692025 - 27691885
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaa 218  Q
    |||||||| | | ||||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    ||| || ||||||    
T  27692025 tgatgacaattagtcattcactatttttagagtcttttttacgatatttttgaattcacaagcaagattaagcagcaagaaaagcaagaa-aaactgaaa 27691927  T
Q  219 aa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||  || || ||||||||||||||||||||||||||||||||    
T  27691926 aaaggggattgtgtcacgattactgaaaaacgtgacacgatt 27691885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 19820821 - 19820914
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||||  ||||| ||||||    
T  19820821 aagaataggtgcagtataccaattaggggaacaaagatgattcgaaagacctgatctcatctctcttcatattttctaaccgaatctttatttt 19820914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 27677083 - 27676986
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaa 392  Q
    ||||||| |||||||||||||||||| | |||||| ||||||||| |||||| || |||||||||||||||| ||||||| |||||||||||||||||    
T  27677083 aagaataggtgcagtataccaattagaggaacataaatgattcgatagaccttatctcatctctcttcatattttctaaccaaatctatattttctaa 27676986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 15430766 - 15430616
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaaga 210  Q
    |||||||||||| |||||  ||||||| ||||||||||| ||||||||||||| |||||||||||| |||||||||||||        |||||||| |||    
T  15430766 tgatgacagtcagtcattcgttattttcagagtcttttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaactggaga 15430667  T
Q  211 agctgaaaaa---ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    | ||||||||   || |||||||||| ||||||||||||||||||||||||    
T  15430666 aactgaaaaaacggggatcgtgtcacaattactgaaaaacgtgacacgatt 15430616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 15437380 - 15437230
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaaga 210  Q
    |||||||||||| |||||  ||||||| ||||||||||| ||||||||||||| |||||||||||| |||||||||||||        |||||||| |||    
T  15437380 tgatgacagtcagtcattcgttattttcagagtcttttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaactggaga 15437281  T
Q  211 agctgaaaaa---ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    | ||||||||   || |||||||||| ||||||||||||||||||||||||    
T  15437280 aactgaaaaaacggggatcgtgtcacaattactgaaaaacgtgacacgatt 15437230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 44164001 - 44164142
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttt-tatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaa 218  Q
    |||||||||||| ||||| | |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||     ||||||   |||    
T  44164001 tgatgacagtcagtcattcactatttttaaagtcttttttatgatatttttgagttcacaagcaagattaagcagcaagaaaa---gcaagaagggaaaa 44164097  T
Q  219 aa-----ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||     || |||||||||||||||||||||||||||||||||||    
T  44164098 aaaaggggggatcgtgtcacgattactgaaaaacgtgacacgatt 44164142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 48415557 - 48415458
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacata----gatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| |||||||||||||||||||| ||||||    ||| |||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  48415557 aagaataggtgcagtataccaattaggggaacatatatagataattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 48415458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 19826701 - 19826850
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgata-tttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaaga 210  Q
    |||||||||||| |||||   |||||||||||||||||||||| | ||||||| |||||||| ||||||||||| |||||        ||||||||||||    
T  19826701 tgatgacagtcagtcattcgctatttttagagtctttttatgaaattttttgagttcacaagtaagattaagcaacaagaaaagcaagaaaaactgaaga 19826800  T
Q  211 agctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    | ||||||||  || ||||||||||||||||||||||||||| |||||||    
T  19826801 aactgaaaaaaggggatcgtgtcacgattactgaaaaacgtgtcacgatt 19826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 24045057 - 24044976
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| |||||  ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  24045057 tgatgacagtcagtcattcgttatttttagagtctttttttgatatttttgagttcacaaacaagattaagcagcaagaaaa 24044976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 52007431 - 52007292
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctga--a 217  Q
    |||||||||||| |||||   |||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||| | |||||| ||||  |    
T  52007431 tgatgacagtcagtcattcgctatttttagagtctttttatgatattgttgagttcaaaagcaagcttaagcagcaagaaaaatc-gaagaaactgaaga 52007333  T
Q  218 aaaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    || || ||| ||||||||| ||| ||||||||| |||||||    
T  52007332 aagggaatcatgtcacgataactaaaaaacgtgtcacgatt 52007292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 379
Target Start/End: Original strand, 12782998 - 12783082
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaat 379  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| | ||||| ||||    
T  12782998 aagaataggtgcagtataccaattagaggaacatagatgattcgaaagacctgatctcatctctcttcatatttcctaaccaaat 12783082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 27014357 - 27014423
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  27014357 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctt 27014423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 3718336 - 3718417
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| ||||| | |||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  3718336 tgatgacagtcactcattcactatttttagagtatttttatgatatttttgagttcacaagcaagcttaagcaacaagaaaa 3718417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 3797836 - 3797771
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  3797836 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 3797771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 5670671 - 5670736
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  5670671 aagaatatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatcgcatctctct 5670736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 5672989 - 5673054
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  5672989 aagaatatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatcgcatctctct 5673054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 19859550 - 19859485
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  19859550 aagaatatgtgcagtataccaattaggggatcatagatgattcgaaagacctgatctcatctctct 19859485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 34017809 - 34017744
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  34017809 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 34017744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 39501742 - 39501807
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  39501742 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 39501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 40616836 - 40616771
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  40616836 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 40616771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 48637607 - 48637664
Alignment:
Q  303 gtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48637607 gtgcagtataccaattagggaaacatagatgattcgaaagacctgatctcatctctct 48637664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 52530963 - 52530898
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  52530963 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 52530898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 40794213 - 40794273
Alignment:
Q  141 tatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  40794213 tatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 40794273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 14571048 - 14571107
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  14571048 atttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 14571107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 35509201 - 35509320
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaaa 219  Q
    |||| ||||||| |||||  ||||||||||  ||||| |||||||||||||| |||||||||||||||||||| |||| ||||||||||||||           
T  35509201 tgataacagtcagtcattcgttatttttag--tctttatatgatatttttgagttcacaagcaagattaagcaacaag-aaaaactgaagaag------- 35509290  T
Q  220 aggcatcgtgtcacgattactgaaaaacgtg 250  Q
     || |||||||||||||||||||||||||||    
T  35509291 -gggatcgtgtcacgattactgaaaaacgtg 35509320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 56198950 - 56199012
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  56198950 aataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatttcatctctct 56199012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 11195769 - 11195834
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  11195769 aagaatatgtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 11195834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 12782106 - 12782187
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| |||||   ||||||||||||| ||||||||||||||||| || ||||||||| ||||||||||||||||    
T  12782106 tgatgacagtcagtcattcgctatttttagagtcattttatgatatttttgagtttacaagcaagcttaagcagcaagaaaa 12782187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 19864545 - 19864480
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  19864545 aagaataggtgcagtataccaattaggggatcatagatgattcgaaagacctgatctcatctctct 19864480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 24150766 - 24150831
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  24150766 aagaataggtgcagtataccaattaggggaacacagatgattcgaaagacctgatctcatctctct 24150831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 27677763 - 27677706
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  27677763 aaaaacgtgacacgattatggaaaccctaattttggtggtttgttacacaaggaagaa 27677706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 39498403 - 39498468
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  39498403 aagaataggtgcagtataccaattaggggaacttagatgattcgaaagacctgatctcatctctct 39498468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 21419000 - 21419060
Alignment:
Q  141 tatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  21419000 tatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 21419060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 33927068 - 33927131
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  33927068 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 33927131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 56195623 - 56195686
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  56195623 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 56195686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 29323978 - 29324048
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  29323978 ctgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaa 29324048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 18673110 - 18673045
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  18673110 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 18673045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 24044849 - 24044792
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  24044849 aaaaacgtgacacgattatggaaaccctaattttggtagtttgttacacaaggaagaa 24044792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 27691831 - 27691774
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  27691831 aaaaacgtgacacgattatgaaaaccctaattttggtggtttgttacacaaggaagaa 27691774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 37103244 - 37103195
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagac 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37103244 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagac 37103195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 44809904 - 44809835
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    |||||||||||| ||||||  |||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  44809904 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaa 44809835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 19820143 - 19820194
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  19820143 aaaaacgtgacacgattatggaaaccctaattttggtggtttgttacacaag 19820194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 21419202 - 21419253
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  21419202 aaaaacgtgacacgattatggaaaccctaatttaggtggtttgttacacaag 21419253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 34319943 - 34319880
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||    
T  34319943 gaataggtgcagtataccaattaagggaacatcgatgattcgaaagacctgatctcatctctct 34319880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 35509379 - 35509430
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  35509379 aaaaacgtgacacgattaaggaaaccctaatttgggtggtttgttacacaag 35509430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 52007238 - 52007187
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  52007238 aaaaacgtgacacgattatggaaaccctaattttggtggtttgttacacaag 52007187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 15405106 - 15405044
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||||||||| ||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  15405106 aataggtgcagtatatcaattaggggaacttagatgattcgaaagacctgatctcatctctct 15405044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 27013229 - 27013311
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttt-tatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| |||||   ||||||||||||||||| |||||||||||||| |||||| ||||| ||||||| ||||||||    
T  27013229 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcacaggcaagcttaagcaacaagaaaa 27013311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 15430562 - 15430505
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    ||||||||||||| |||||||||||| |||||| |||||||| |||||||||||||||    
T  15430562 aaaaacgtgacacaattatggaaaccataattttggtggttttttacacaaggaagaa 15430505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 15437176 - 15437119
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    ||||||||||||| |||||||||||| |||||| |||||||| |||||||||||||||    
T  15437176 aaaaacgtgacacaattatggaaaccataattttggtggttttttacacaaggaagaa 15437119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 44164196 - 44164253
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    ||||| |||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  44164196 aaaaatgtgacacgattatggaaaccctaattttagtggtttgttacacaaggaagaa 44164253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 18911592 - 18911656
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||||||||  | |||||||||    
T  18911592 aagaataggtgcagtataccaattaggggaacatagatgattcaaaagacctagtctcatctctc 18911656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 34320839 - 34320775
Alignment:
Q  125 acagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    ||||||| ||||||  |||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  34320839 acagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaa 34320775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 3718538 - 3718589
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  3718538 aaaaatgtgacacgattatggaaaccctaatttaggtggtttgttacacaag 3718589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 5680491 - 5680550
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||| || ||||||||    
T  5680491 atttttagagtctttttatgatatttttgagttcataagcaagcttaaacaacaagaaaa 5680550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 15432172 - 15432267
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||||||||||  | |||||||||||  ||| ||| ||  |||||| ||||||||    
T  15432172 aagaataggtgcagtataccaattaggggaacatcgatgactcgaaagacctagtctcatctctcttattattttccaaacaaatctttattttct 15432267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 15812162 - 15812099
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| ||||  |||||||||||||| ||||||||||    
T  15812162 gaataggtgcagtataccaattaggggaacatcgatgtatcgaaagacctgatctcatctctct 15812099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 19826904 - 19826955
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  19826904 aaaaacgtgacacgattatggaaaccctaatttttgtggtttgttacacaag 19826955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 46955503 - 46955440
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    |||| |||||||||||||||||||| ||||| |||||||| |||||||| || |||||||||||    
T  46955503 aataggtgcagtataccaattaggggaacatcgatgattcaaaagacctaatctcatctctctt 46955440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 15431164 - 15431240
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||| |||||| |||||||||||| |||| ||||||    
T  15431164 tgatgacagtcagtcattcactatttttagagtctttttcatgata-ttttgagttcacaagcaagtttaaacagcaa 15431240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 15437778 - 15437854
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||| |||||| |||||||||||| |||| ||||||    
T  15437778 tgatgacagtcagtcattcactatttttagagtctttttcatgata-ttttgagttcacaagcaagtttaaacagcaa 15437854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 35510085 - 35510150
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||| |||||||||||||||| || |||||||||||||||||||| |  ||||||||||    
T  35510085 aagaataggtgtagtataccaattaggggaatatagatgattcgaaagacctaaactcatctctct 35510150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 5706486 - 5706550
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||||||||||  | |||||||||    
T  5706486 aagaataggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 5706550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 12238359 - 12238423
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||||||||||  | |||||||||    
T  12238359 aagaataggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 12238423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 3719217 - 3719260
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcg 338  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  3719217 aagaataggtgcagtataccaattagggaaacatggatgattcg 3719260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 373
Target Start/End: Complemental strand, 8871782 - 8871716
Alignment:
Q  306 cagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaa 373  Q
    |||||||||||||| || ||| ||||||||| |||||||||||| ||||||||| |||||| ||||||    
T  8871782 cagtataccaattaagggaacttagatgatttgaaagacctgatctcatctctc-tcatattttctaa 8871716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 373
Target Start/End: Complemental strand, 8877525 - 8877451
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaa 373  Q
    |||| ||||||||||| || ||||| ||| ||||||||| |||||||||||| ||||||||| |||||| ||||||    
T  8877525 aataggtgcagtatactaaataggggaacttagatgatttgaaagacctgatctcatctctc-tcatattttctaa 8877451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 12782318 - 12782365
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttaca 289  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  12782318 aaaaacgtgacacgattatggaaaccctaatttaggttgtttgttaca 12782365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 29324921 - 29324983
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| ||||| |||||||||||||||| ||| |||||||||||||||||||| | ||||||||    
T  29324921 gaataggtgcaatataccaattagggaa-catcgatgattcgaaagacctgatctgatctctct 29324983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 40794416 - 40794467
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||| ||||||||||||| |||||| ||||||||||| ||||||    
T  40794416 aaaaacgtgacaagattatggaaaccctaatttaggtggtttgttgcacaag 40794467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 21419882 - 21419947
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||  ||||||||||||||| ||||| ||||||||||||||||| |  ||||||||||    
T  21419882 aagaataggtgtggtataccaattaggggaacatcgatgattcgaaagacctaaactcatctctct 21419947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 25962152 - 25962217
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||| ||||||||||||||  ||||| ||||||||||||||||| |  ||||||||||    
T  25962152 aagaataggtgcggtataccaattaggagaacatcgatgattcgaaagacctaaactcatctctct 25962217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 53009586 - 53009521
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |  ||||||||||    
T  53009586 aagaataggtgcagtatactaattaggggaacatagacgattcaaaagacctaaactcatctctct 53009521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 15164287 - 15164363
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttct 371  Q
    ||||||| | ||| |||||||||||| | || || |||||||||||||||| ||| |||||||||| ||||| ||||    
T  15164287 aagaataggggcaatataccaattagaggaatatcgatgattcgaaagacccgatctcatctctctccatattttct 15164363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 53094605 - 53094677
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcg-aaagacctgatttcatctctcttcatatctt 369  Q
    |||| |||||||||||||||||||| ||| |||| |||| | ||||||||||| |||||||||| | ||||||    
T  53094605 aataggtgcagtataccaattaggggaacttagaggatttgaaaagacctgatctcatctctctccttatctt 53094677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 33408345 - 33408294
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||| |||||||||||| ||||||| ||| |||| ||||||||||||||    
T  33408345 aagaataggtgcagtataccgattaggggaacttagaggattcgaaagacct 33408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 40493395 - 40493344
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||| |||  ||||||||||||||| ||||| |||||||||||||||||    
T  40493395 aagaataggtgtggtataccaattaggggaacatcgatgattcgaaagacct 40493344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 44808981 - 44808922
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatct 356  Q
    ||||| ||||| |||||||||||||  ||||| |||||||||||||| ||||| ||||||    
T  44808981 gaataggtgcaatataccaattaggagaacatcgatgattcgaaagatctgatctcatct 44808922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 49269735 - 49269786
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttga 171  Q
    |||||||||||| ||||||   ||||||||||| ||||||||||||||||||    
T  49269735 tgatgacagtcagtcattttacatttttagagtttttttatgatatttttga 49269786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 24044937 - 24044903
Alignment:
Q  224 atcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||||||||||||||||||||| |||||||||||    
T  24044937 atcgtgtcacgattactgaaaaatgtgacacgatt 24044903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 30392665 - 30392727
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| ||||| |||||||||||||| |||||| |||||| ||||||||| |  ||||||||||    
T  30392665 aataggtgcaatataccaattaggggaacatatatgattggaaagacctaaactcatctctct 30392727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 3798796 - 3798720
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | ||||||||| ||| |||| |||||||||| || |||||||||||| |||| ||||||    
T  3798796 tgatgacagtcagtcattcactatttttagtgtcattttcatgatatttt-gagttcacaagcaagtttaaacagcaa 3798720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 5681532 - 5681585
Alignment:
Q  306 cagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    |||||||||||||| || ||||| |||||||||||||||||  | |||||||||    
T  5681532 cagtataccaattaagggaacatcgatgattcgaaagacctagtctcatctctc 5681585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 8875470 - 8875418
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaagg 294  Q
    ||||||||||||||||| |||||| | |||||  ||| |||||||||||||||    
T  8875470 aaaaacgtgacacgattttggaaatcctaattcaggttgtttgttacacaagg 8875418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 346
Target Start/End: Complemental strand, 29544899 - 29544851
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    |||| ||||| |||||||||||| | ||||| |||||||||||||||||    
T  29544899 aataggtgcaatataccaattagaggaacatcgatgattcgaaagacct 29544851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 9e-37; HSPs: 104)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 16244052 - 16244150
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  16244052 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 16244150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 20728662 - 20728564
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||||    
T  20728662 aagaatatgtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaatcaaatctatattttctaac 20728564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 45896560 - 45896655
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  45896560 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 45896655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 29343889 - 29343791
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  29343889 aagaataggtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 29343791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 43927014 - 43927112
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  43927014 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacatgatctcatctctcttcatattttctaaccaaatctatattttctaac 43927112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 2775661 - 2775754
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  2775661 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 2775754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 2778904 - 2778997
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  2778904 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 2778997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 25584856 - 25584949
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  25584856 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 25584949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 10880776 - 10880924
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaa---------aaaactgaaga 210  Q
    |||||||||||| | ||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||         |||  ||||||    
T  10880776 tgatgacagtcagttatttgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagataaagttgaaga 10880875  T
Q  211 agctg-aaaaaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  10880876 agctgaaaaaaggcatcgtgtcacgatttatgaaaaacgtgacacgatt 10880924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 29344774 - 29344624
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtcttt-ttatgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaag 209  Q
    ||||||||||||| ||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||        ||||| |||||    
T  29344774 ctgatgacagtcagtcattcactatttttagagtctttcttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaattgaag 29344675  T
Q  210 aagctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    || ||||||||  || ||||||||||||||| |||||||||||||||||||    
T  29344674 aaactgaaaaaaggggatcgtgtcacgattattgaaaaacgtgacacgatt 29344624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 53814971 - 53815120
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcag---------caagaaaaaactgaaga 210  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||| ||||||||         ||||||||| |||||||    
T  53814971 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaagctgaaga 53815070  T
Q  211 agctgaaa--aaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    | ||||||  ||||||||||||||| |||||||||||||||| |||||||    
T  53815071 aactgaaaagaaggcatcgtgtcacaattactgaaaaacgtgtcacgatt 53815120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 49742934 - 49742839
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  49742934 aagaataggtgcaatataccaattaggggaacataaatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 49742839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 10881659 - 10881753
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||||| ||||||| ||||||||||||||    
T  10881659 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacttgatctcatctttcttcatattttctaaccaaatctatattttc 10881753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 31549351 - 31549449
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||| ||||||| |||| |||||||||||||    
T  31549351 aagaataggtgcagtataccaattagggaaacttagatgattcaaaagacctgatcttatctctcttcatattttctaacaaaatttatattttctaac 31549449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 303 - 389
Target Start/End: Original strand, 10902127 - 10902213
Alignment:
Q  303 gtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| |||||||    
T  10902127 gtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctttattttc 10902213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 34984758 - 34984602
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaag------------------aaaa 201  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||                  ||||    
T  34984758 tgatgacagtcagtcattcgttatttttagagtctttttatgatatttttgagttcacaagcaagattaagcaacaagaaaagcaagaaaagaaacaaaa 34984659  T
Q  202 aactgaagaagctg-aaaaaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34984658 aactg-agaagctgaaaaaaggcatcgtgtcacgattactgaaaaacgtgacacgatt 34984602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 41976321 - 41976461
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaagaa 211  Q
    |||||||||||| |||||   |||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||||        |||||||||||||    
T  41976321 tgatgacagtcagtcattcgctatttttagagtgtttttataatatttttgagttcacaagcaagattaaacagcaagaaaagcaacaaaaactgaagaa 41976420  T
Q  212 gctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtg 250  Q
     ||||||||  || |||||||||||||||||||||||||||    
T  41976421 actgaaaaaaggggatcgtgtcacgattactgaaaaacgtg 41976461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 16243164 - 16243247
Alignment:
Q  118 cctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||| ||| |||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16243164 cctgatgacaatcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaa 16243247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 43808898 - 43809003
Alignment:
Q  140 ttatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaag-------aaaaaactgaagaagct-gaaaaaggcatcgtgtc 231  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||       |||||| ||||||||||  ||||||||||||||||    
T  43808898 ttatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaaaaaaaatgaagaagctaaaaaaaggcatcgtgtc 43808997  T
Q  232 acgatt 237  Q
    ||||||    
T  43808998 acgatt 43809003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 3840696 - 3840794
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||| |||||| ||||||||| ||||| |||||||||||||||||||| |||||| ||||||||| ||||||| |||| |||||||||||||    
T  3840696 aagaataggtgtagtatatcaattaggggaacatggatgattcgaaagacctgatctcatctatcttcatattttctaaccaaatatatattttctaac 3840794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 24125678 - 24125743
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24125678 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagacctgatctcatctctct 24125743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 24128955 - 24129020
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24128955 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagacctgatctcatctctct 24129020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 52309630 - 52309537
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||  ||||| ||||||    
T  52309630 aagaataggtgcaatataccaattaggggaacatagttgattcgaaagacctgatctcatctctcttcatattttctaaccgaatctttatttt 52309537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 54460360 - 54460448
Alignment:
Q  113 tgtttcctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  54460360 tgtttactgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaatcttaagcaacaagaaaa 54460448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 8461502 - 8461436
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  8461502 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagacctaatctcatctctctt 8461436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 20729477 - 20729336
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaa- 217  Q
    |||||||||||| |||||   |||||||||||| ||||| ||||||||||| | |||||||||||| ||||||||||||||||| | |||||| |||||     
T  20729477 tgatgacagtcagtcattcgctatttttagagttttttttatgatattttttagttcacaagcaagcttaagcagcaagaaaaatc-gaagaaactgaag 20729379  T
Q  218 aaag-gcatcgtgtcacgattactgaaaaacgtgacacgatta 259  Q
    |||| | ||| ||||||||| ||||||||||||| ||||||||    
T  20729378 aaagtgaatcatgtcacgataactgaaaaacgtgtcacgatta 20729336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 41977180 - 41977278
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||||||||||||||||  |||| ||||||||||||||| ||||| |||||||| ||||||| |  |||| ||||||||||||||||||    
T  41977180 aagaataagtgcagtataccaattaggagaacacagatgattcgaaagatctgatctcatctctattcatatttcataaccaaatctatattttctaac 41977278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 2873743 - 2873808
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  2873743 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 2873808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 6922699 - 6922764
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  6922699 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 6922764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 7486750 - 7486815
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  7486750 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 7486815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 30690915 - 30690980
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30690915 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagacctgatcttatctctct 30690980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 32287338 - 32287273
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  32287338 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 32287273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 53816007 - 53816072
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  53816007 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 53816072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 28266099 - 28266161
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  28266099 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 28266161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 11190706 - 11190771
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  11190706 aagaataggtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 11190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 11784945 - 11785010
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||    
T  11784945 aagaatatgtgcagtataccaattaggggaacatcgatgattcgaaagacctaagttcatctctct 11785010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 16184702 - 16184637
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  16184702 aagaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 16184637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 34984548 - 34984491
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  34984548 aaaaacgtgacacgattatgaaaaccctaatttgggtggtttgttacacaaggaagaa 34984491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 41976493 - 41976550
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  41976493 aaaaacgtgacacgattatgaaaaccctaatttgggtggtttgttacacaaggaagaa 41976550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 54736842 - 54736769
Alignment:
Q  128 gtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||| | |||||||||||||||||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  54736842 gtcaatcattcactatttttagagtctttttatgatacttttgagttcacaagcaagcttaagcaacaagaaaa 54736769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 9380012 - 9380092
Alignment:
Q  121 gatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||||| |||||   ||||||||||||||||||||||||||||||| |||||||||||| |||||||  |||||||    
T  9380012 gatgacagtcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcaataagaaaa 9380092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 16185634 - 16185575
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  16185634 atttttagagtctttttatgatatttttgagttcacaaacaagcttaagcagcaagaaaa 16185575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 35411699 - 35411758
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  35411699 atttttagagtctttttatgatatttttgagttcacaagcaaacttaagcagcaagaaaa 35411758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 47051677 - 47051740
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  47051677 gaataggtgcagtataccagttaggggaacatagatgattcgaaagacctgatctcatctctct 47051740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 50461561 - 50461498
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  50461561 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 50461498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 3839790 - 3839874
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt---atgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| ||||| | |||||||||||| |||||   ||||||||||||| |||||||||||| ||||||||||||||||    
T  3839790 tgatgacagtcagtcattcactatttttagagtttttttttaatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 3839874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 6434790 - 6434728
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  6434790 aataggtgcagtataccaattaggggaacatagatgattcgaaagacctaatctcatctctct 6434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 539006 - 539071
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||    
T  539006 aagaataggtgtagtataccaattagggaaacatatatgattcgaaagacctaatctcatctctct 539071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 17528776 - 17528711
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| ||||| || ||||||||||    
T  17528776 aagaatatgtgcagtatatcaattaggggaacatagatgattcgaacgacctaatctcatctctct 17528711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 19305547 - 19305470
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaag 197  Q
    |||||||| || |||||||  |||||||||||||||||||| |||||||||| |||||||||||| |||| |||||||    
T  19305547 tgatgacaatccatcatttcatatttttagagtctttttataatatttttgagttcacaagcaagcttaaacagcaag 19305470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 22416849 - 22416784
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  22416849 aagaataagtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 22416784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 27092073 - 27092138
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||  ||||| |||||||||||||||||||| ||||||||||    
T  27092073 aagaataggtgcagtataccaattaggagaacatcgatgattcgaaagacctgatctcatctctct 27092138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 31548753 - 31548810
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  31548753 aaaaacgtgacacgattatggaaaccctaattttggtggtttgttacacaaggcagaa 31548810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 37408860 - 37408925
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  37408860 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 37408925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 43809767 - 43809824
Alignment:
Q  303 gtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  43809767 gtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 43809824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 46885119 - 46885184
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  46885119 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 46885184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 54723921 - 54723986
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||    
T  54723921 aagaataggtgcagtataccaattatgggaacatagatgattcggaagacctgatctcatctctct 54723986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 35751628 - 35751696
Alignment:
Q  303 gtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttct 371  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||| ||||| ||||    
T  35751628 gtgcagtatacaaattaggggaacatcgatgattcgaaagacctgatctcatctctctccatattttct 35751696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 10885036 - 10885087
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  10885036 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacct 10885087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 31548573 - 31548632
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||||| ||||||| |||| |||||||| |||||||    
T  31548573 atttttagagtctttttatgatatttttgagttcacaaccaagcttaagcagtaagaaaa 31548632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 6445577 - 6445513
Alignment:
Q  196 agaaaaaactgaagaagctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    |||||||||||||||| |||||||   |||||||||||||||||||||||||||||| |||||||    
T  6445577 agaaaaaactgaagaaactgaaaagagggcatcgtgtcacgattactgaaaaacgtgtcacgatt 6445513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 12561249 - 12561184
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  12561249 aagaataggtgcagtatatcaattaggggaacatagatgattcgaaagacctaaactcatctctct 12561184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 19302364 - 19302295
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    |||||| ||||  ||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  19302364 tgatgatagtccgtcatttcatatttttagagtctttttatgatatttttgagttcacaagcaagcttaa 19302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 28008086 - 28008021
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||| |||| ||| ||||||||||||||||||||||| || ||||||||||    
T  28008086 aagaataggtgcagtatacaaatttggggaacatagatgattcgaaagacctaatctcatctctct 28008021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 52990879 - 52990944
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  52990879 aagaataggtgcggtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 52990944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 54720150 - 54720215
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |  ||||||||||    
T  54720150 aagaataggtgcaatataccaattatggaaacatagatgattcgaaagacctaaactcatctctct 54720215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 32367136 - 32367096
Alignment:
Q  304 tgcagtataccaattagggaaacatagatgattcgaaagac 344  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32367136 tgcagtataccaattagggaaacatagatgattcgaaagac 32367096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 16243374 - 16243425
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||| |||||||||||||||| || |||||||||||||||||||||||||    
T  16243374 aaaaacatgacacgattatggaacccctaatttgggtggtttgttacacaag 16243425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 47055107 - 47055170
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| ||||||||||| | ||| || |||||||||||||||||||||||||| ||||||||||    
T  47055107 gaataggtgcagtatactagttatgggaacatagatgattcgaaagacctgatctcatctctct 47055170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 29344567 - 29344513
Alignment:
Q  245 aacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    ||||||||| ||||||||||||| |||||| || |||||||||||||||||||||    
T  29344567 aacgtgacatgattatggaaaccctaattttggaggtttgttacacaaggaagaa 29344513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 55032009 - 55031947
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||  | |||||||||    
T  55032009 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctagtctcatctctc 55031947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 55034869 - 55034807
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||  | |||||||||    
T  55034869 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctagtctcatctctc 55034807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 10884018 - 10884094
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||| |||||| |||||||||||| |||| ||||||    
T  10884018 tgatgacagtcagtcattcactatttttagagtctttttcatgata-ttttgagttcacaagcaagtttaaacagcaa 10884094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 17531671 - 17531606
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||| ||||| |  ||||||||||    
T  17531671 aagaataggtgcagtataccaattagaggaacatagatgattcgaacgacctaaactcatctctct 17531606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 17546040 - 17546132
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttcta 391  Q
    |||| |||||||||||||||||||| |||  ||| ||||||||||| ||||| |||||||||| ||||| ||||||  |||| | |||||||||    
T  17546040 aataggtgcagtataccaattaggggaacc-agaagattcgaaagatctgatctcatctctctccatattttctaatcaaatatttattttcta 17546132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 23298630 - 23298565
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||| |||||||||| || ||| ||||||||||||||||||| || ||||||||||    
T  23298630 aagaataggtgcagcataccaattaagggaacttagatgattcgaaagacctaatctcatctctct 23298565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 23299553 - 23299477
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||| |||||| |||||||||||| |||| ||||||    
T  23299553 tgatgacagtcagtcattcactatttttagagtctttttcatgata-ttttgagttcacaagcaagtttaaacagcaa 23299477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 25442874 - 25442809
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||| |||||||||||||| |||||| |||||||||||||||| |  ||||||||||    
T  25442874 aagaataggtgcaatataccaattaggggaacataaatgattcgaaagacctaaactcatctctct 25442809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 30220020 - 30219955
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||  ||||||||||| ||| ||||||||||||||||| |||| ||||||||||    
T  30220020 aagaataggtgcagttgaccaattaggggaacttagatgattcgaaagacatgatctcatctctct 30219955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 3293643 - 3293591
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaagg 294  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||| ||||||    
T  3293643 aaaaacgtgacacgattcaggaaaccctaatttgggtggtttgttatacaagg 3293591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 10106614 - 10106551
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||  | |||||||||    
T  10106614 aagaataggtgcagtataccaattagg-aaacatagatgattcaaaagacctagtctcatctctc 10106551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 18641787 - 18641723
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||||||||||  | |||||||||    
T  18641787 aagaataggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 18641723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 18644783 - 18644719
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||||||||||  | |||||||||    
T  18644783 aagaataggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 18644719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 52200092 - 52200156
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||||||| |||||  ||||||||||||||||  | |||||||||    
T  52200092 aagaataggtgcagtataccaattaggggaacatcaatgattcgaaagacctagtctcatctctc 52200156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 3840016 - 3840067
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| |||| | | ||||||||||||||||    
T  3840016 aaaaacgtgacacgattatggaaaccctaatgtagatggtttgttacacaag 3840067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 9392925 - 9392967
Alignment:
Q  307 agtataccaattagggaaacatagatgattcgaaagacctgat 349  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  9392925 agtataccaattaggggaacatagatgattcaaaagacctgat 9392967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 48064050 - 48064000
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacc 345  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||| ||||    
T  48064050 aagaatagatgcagtataccaattaggggaacatagatgattcgaacgacc 48064000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 54460460 - 54460525
Alignment:
Q  195 aagaaaaaactgaagaagctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||||||||||||||| |||||||   |||||||||||||||||||| |||| |||| |||||||    
T  54460460 aagaaaaaactgaagaaactgaaaagtgggcatcgtgtcacgattactaaaaagcgtgtcacgatt 54460525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 538015 - 538091
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||| |||||| ||||||| |||| |||| ||||||    
T  538015 tgatgacagtcagtcattcactatttttagagtctttttcatgata-ttttgagttcacaaacaagtttaaacagcaa 538091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 6921890 - 6921966
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaa 196  Q
    |||||||||||| ||||| | ||||||||||| |||||| |||||| |||||| |||||||||||| |||| ||||||    
T  6921890 tgatgacagtcagtcattcactatttttagagcctttttcatgata-ttttgagttcacaagcaagtttaaacagcaa 6921966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 10880978 - 10881035
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||||||||| ||||||  || |||||||| |||||| ||||    
T  10880978 aaaaacgtgacacgattatggaaaccctaatttcagttgtttgttaaacaaggcagaa 10881035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 17040037 - 17039972
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||  |||||||||||| || ||||| |||||||||||||||||||| |||| |||||    
T  17040037 aagaataagtgttgtataccaattaagggaacatcgatgattcgaaagacctgatctcatttctct 17039972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 17141587 - 17141652
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||| |||||||||||||| ||||||||| |||| |||||||| |  ||||||||||    
T  17141587 aagaataggtgcaatataccaattaggggaacatagataattcaaaagacctaagctcatctctct 17141652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 34983868 - 34983803
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||| |||||||||| |||| ||||||||| ||||||||||||| |  ||||||||||    
T  34983868 aagaataggtgcggtataccaatcaggggaacatagatcattcgaaagacctaaactcatctctct 34983803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 35412689 - 35412753
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||||| | ||||| ||||| |||||||||||  | |||||||||    
T  35412689 aagaataggtgcagtataccaattagaggaacattgatgactcgaaagacctagtctcatctctc 35412753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 3292970 - 3292909
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| ||||| |||||||||||||| || | ||||||||| ||||||||||| ||||||||||    
T  3292970 aataggtgcaatataccaattaggggaa-acagatgattcaaaagacctgatctcatctctct 3292909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 258
Target Start/End: Original strand, 16243286 - 16243320
Alignment:
Q  224 atcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||||||||||||||||||||||||| |||||||    
T  16243286 atcgtgtcacgattactgaaaaacgtgtcacgatt 16243320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 22783782 - 22783859
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaa 373  Q
    |||||||||||  || | |||||||||| || | ||| ||||||||||||||||| |||||||||| ||||| ||||||    
T  22783782 aagaatatgtgatgtgtgccaattaggggaa-acagaggattcgaaagacctgatctcatctctctccatattttctaa 22783859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 22788146 - 22788223
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaa 373  Q
    |||||||||||  || | |||||||||| || | ||| ||||||||||||||||| |||||||||| ||||| ||||||    
T  22788146 aagaatatgtgatgtgtgccaattaggggaa-acagaggattcgaaagacctgatctcatctctctccatattttctaa 22788223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 22993708 - 22993646
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| ||||||| |||||||||||| ||| |||| ||||||||||||||  | ||||||||||    
T  22993708 aataggtgcagtgtaccaattaggggaacttagaggattcgaaagacctagtctcatctctct 22993646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 28265112 - 28265149
Alignment:
Q  221 ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  28265112 ggcatcgtgtcacgattactgaaaaatgtgtcacgatt 28265149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 258
Target Start/End: Original strand, 3839930 - 3839962
Alignment:
Q  226 cgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||||||||||||||||||||||| |||||||    
T  3839930 cgtgtcacgattactgaaaaacgtgtcacgatt 3839962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 49743825 - 49743785
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttat 160  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  49743825 tgatgacagtcagtcattagttatttttagagtctttttat 49743785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 54461194 - 54461258
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||| ||| ||| ||||| ||||| |||||||||||  | |||||||||    
T  54461194 aagaataggtgcagtatacccatttggggaacattgatgactcgaaagacctagtctcatctctc 54461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 9e-37; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 2405605 - 2405703
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  2405605 aagaataggtgcagtataccaattaggaaaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 2405703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 21019367 - 21019228
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaaa 219  Q
    |||||||||||| |||||   ||||||||||||||||| ||||||||||||| ||| ||| |||| |||||||||||||||||||||||||| || ||||    
T  21019367 tgatgacagtcagtcattcgctatttttagagtctttt-atgatatttttgagttcgcaaccaagcttaagcagcaagaaaaaactgaagaaactaaaaa 21019269  T
Q  220 a--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    |  |||||||||||||||||||||||||||||| |||||||    
T  21019268 aagggcatcgtgtcacgattactgaaaaacgtgtcacgatt 21019228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 45941512 - 45941607
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  45941512 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 45941607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 2404722 - 2404870
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaa---------aaaactgaaga 210  Q
    |||||||||||| |||||   |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||         |||||||||||    
T  2404722 tgatgacagtcagtcattcgctatttttagagtctttttataatatttttgagttcacaagcaagattaagcagcaagaaaagcaagataaaactgaaga 2404821  T
Q  211 agctg-aaaaaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||| ||||    
T  2404822 agctgaaaaaaggcatcgtgtcacaatttctgaaaaacgtgacatgatt 2404870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 21107319 - 21107225
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  21107319 aagaataggtgcagtataccaattaggtgaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 21107225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 21111186 - 21111092
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  21111186 aagaataggtgcagtataccaattaggagaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 21111092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 21114526 - 21114432
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  21114526 aagaataggtgcagtataccaattaggagaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 21114432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 21018495 - 21018397
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| || |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||| ||||    
T  21018495 aagaataggttcagtatacaaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttttaac 21018397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 41058330 - 41058232
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||| ||||||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||||||| ||||||||||||||||||    
T  41058330 aagaataggtgcagcataccaattagaggaacatagatgattcgaaagacctaatctcttctctcttcatattttctaaccaaatctatattttctaac 41058232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 2794323 - 2794388
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  2794323 aagaataggtgcagtataccaattagggaaacatagatgactcgaaagacctgatctcatctctct 2794388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 21108393 - 21108245
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaagaa 211  Q
    |||||||||||| |||||   | ||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||        |||||||||||||    
T  21108393 tgatgacagtcagtcattcgctctttttagagtcttcttatgatatttttgaactcaaaagcaagattaagctgcaagaaaagcaagaaaaactgaagaa 21108294  T
Q  212 gctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
     ||||||||  || ||||||||||||||| ||||||| ||| |||||||    
T  21108293 actgaaaaaaggggatcgtgtcacgattattgaaaaatgtgtcacgatt 21108245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 673098 - 673033
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||    
T  673098 aagaataggtgcagtataccaattagggaaacatagatgattcgaaatacatgatctcatctctct 673033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 20398949 - 20399014
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  20398949 aagaataggtgcagtataccaattaggggaacatagatgactcgaaagacctgatctcatctctct 20399014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 28111152 - 28111217
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  28111152 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagatctgatctcatctctct 28111217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 41059010 - 41058953
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  41059010 aaaaacgtgacacgattatggaaaccctaattttggtggtttgttacacaaggaagaa 41058953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 42021721 - 42021871
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaa----------gaaaaaactgaag 209  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||  ||| |||||||||||| |||||||||||           |||||| |||||    
T  42021721 tgatgacagtcaatcattcgctatttttagagtctttttataatattactgagttcacaagcaagtttaagcagcaataaaagcaagaaaaaaattgaag 42021820  T
Q  210 aagctgaaa--aaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    || ||||||  | |||||||||||||||||||||||||| ||| |||||||    
T  42021821 aaactgaaaagagggcatcgtgtcacgattactgaaaaatgtgtcacgatt 42021871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 27536557 - 27536494
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  27536557 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 27536494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 31204936 - 31204999
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  31204936 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 31204999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 37183889 - 37183826
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  37183889 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 37183826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 41059235 - 41059152
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||||||| |||||   |||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||    
T  41059235 ctgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcgcaagcaagcttaagcagcaagaaaa 41059152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 905713 - 905647
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||  |  |||||||||||    
T  905713 aagaataagtgcagtataccaattagggaaacatagatgattcgaaagaccaaaactcatctctctt 905647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 3796854 - 3796789
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  3796854 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 3796789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 49498525 - 49498460
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||||||| || ||||||||||    
T  49498525 aagaataggtgcagtataccaattaggggaacttagatgattcgaaagacctaatctcatctctct 49498460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 45960769 - 45960705
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttc 362  Q
    |||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  45960769 aataggtgcattataccaattaggggaacatcgatgattcgaaagacctgatctcatctctcttc 45960705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 1950483 - 1950432
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  1950483 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacct 1950432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 21108191 - 21108144
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttaca 289  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  21108191 aaaaacgtgacacgattatggaaaccctaatttgggtggtttgttaca 21108144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 23021951 - 23021888
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctct 358  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||||||| || ||||||||    
T  23021951 aagaataggtgcagtataccaattaggggaacttagatgattcgaaagacctaatctcatctct 23021888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 45961708 - 45961638
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    ||||||||||||| ||||||  ||||||||||||||| |||||||| |||||| |||||||||||| ||||    
T  45961708 ctgatgacagtcagtcatttgctatttttagagtcttgttatgataattttgagttcacaagcaagcttaa 45961638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 2404924 - 2404981
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||    
T  2404924 aaaaacgtgacacgattatggaaaccctaatttcggttgtttgttacacaaggcagaa 2404981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 27537212 - 27537144
Alignment:
Q  121 gatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaa 189  Q
    ||||||||||| ||||||  |||||||| ||||||||||||||| |||||| |||||||||||| ||||    
T  27537212 gatgacagtcagtcatttgctatttttatagtctttttatgataattttgagttcacaagcaagcttaa 27537144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 29644286 - 29644227
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||| ||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||    
T  29644286 atttatagagtctttttatgatatttttgagttcacaagcaaacttaagcagcaaaaaaa 29644227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 357
Target Start/End: Complemental strand, 6070979 - 6070919
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctc 357  Q
    ||||| ||||| |||||||||||||| ||||| |||||||||||| ||||||| |||||||    
T  6070979 gaataggtgcaatataccaattaggggaacatcgatgattcgaaaaacctgatctcatctc 6070919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 21019173 - 21019122
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    ||||| |||||||||||||||||||| || ||||||||| ||||||||||||    
T  21019173 aaaaatgtgacacgattatggaaaccctagtttgggtgggttgttacacaag 21019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 29643249 - 29643184
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||| | |||||| ||||| ||||||||||||||||| |  ||||||||||    
T  29643249 aagaataggtgcagtatactagttaggggaacatcgatgattcgaaagacctaaactcatctctct 29643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 2793299 - 2793368
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaa 189  Q
    |||||||||||| || || | |||||||||||||||||| |||||| |||||| |||||||||||| ||||    
T  2793299 tgatgacagtcagtcgttcactatttttagagtctttttaatgata-ttttgagttcacaagcaagtttaa 2793368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 27355711 - 27355650
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| ||||||| ||||||||||||||||  |||| |||||||||||||  ||||||||||||    
T  27355711 aataggtgcagtgtaccaattagggaaactcagat-attcgaaagacctagtttcatctctct 27355650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 13430977 - 13430920
Alignment:
Q  303 gtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||| |||  ||| |||||||||| |||||| ||||||||||    
T  13430977 gtgcagtgtaccaattaggggaactcagaggattcgaaagccctgatctcatctctct 13430920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 34732379 - 34732314
Alignment:
Q  304 tgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatctt 369  Q
    ||||||||||||||||||| |||  ||| ||||||||||| ||||| |||| ||||| | ||||||    
T  34732379 tgcagtataccaattaggggaactcagaggattcgaaagaactgatctcatatctctccttatctt 34732314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 49147113 - 49147150
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttt 157  Q
    |||||||||||||||||| | |||||||||||||||||    
T  49147113 tgatgacagtcaatcattcactatttttagagtctttt 49147150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 41059096 - 41059064
Alignment:
Q  226 cgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||||||||||||||||||||||| |||||||    
T  41059096 cgtgtcacgattactgaaaaacgtgtcacgatt 41059064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 295 - 392
Target Start/End: Original strand, 198241 - 198338
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaa 392  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  198241 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaa 198338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 197264 - 197323
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  197264 atttttagagtctttttatgatatttttgagttcacaagcaagcataagcagcaagaaaa 197323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 20887626 - 20887721
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttct 390  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  20887626 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttct 20887721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 5584422 - 5584330
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  5584422 gaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 5584330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 12582218 - 12582366
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaagaa 211  Q
    |||||| | |||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||        |||||||||||||    
T  12582218 tgatgaaaatcaatcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagaaagaaaagcaagaaaaactgaagaa 12582317  T
Q  212 gctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
     ||||||||  || ||||||||||||||| ||||||||||| |||||||    
T  12582318 actgaaaaaaggggatcgtgtcacgattattgaaaaacgtgtcacgatt 12582366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 392
Target Start/End: Original strand, 12583099 - 12583199
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagat---gattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttcta 391  Q
    ||||||| |||||||||||||||||||| |||||||||   ||||||||||||||| | |||||||||||||||| ||||||| ||||||||||||||||    
T  12583099 aagaataggtgcagtataccaattaggggaacatagatcatgattcgaaagacctggtctcatctctcttcatattttctaaccaaatctatattttcta 12583198  T
Q  392 a 392  Q
    |    
T  12583199 a 12583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 12516480 - 12516415
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  12516480 aagaataggtgcagtataccaattaggggaatatagatgattcgaaagacctgatttcatctctct 12516415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 16953868 - 16953933
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  16953868 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 16953933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 22173948 - 22173859
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattt 387  Q
    |||| ||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||||  ||||| |||||    
T  22173948 aataggtgtagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctcttcatattttctaaccgaatctttattt 22173859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 5980341 - 5980244
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||| ||||||||||||| || ||||||||||||||||||||| |||| ||||||||| |||||| ||||||  || |||||||||||||||    
T  5980341 aagaataggtgtagtataccaattaagggaacatagatgattcgaaagacatgatctcatctctc-tcatattttctaatcaactctatattttctaac 5980244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 5981220 - 5981083
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga-----aaaaactgaagaagct 214  Q
    |||||||||||  ||||||   |||||||||||||||||||||||||||||| |||||||||||| ||||| || || |     ||||||||||||| ||    
T  5981220 tgatgacagtccgtcatttcacatttttagagtctttttatgatatttttgagttcacaagcaagtttaagtaggaaaagcaagaaaaactgaagaaact 5981121  T
Q  215 gaaaaa--ggcatcgtgtcacgattactgaaaaacgtg 250  Q
     |||||  || |||||||||| ||||||||||||||||    
T  5981120 aaaaaaagggaatcgtgtcacaattactgaaaaacgtg 5981083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 45156919 - 45156837
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||  ||||||   ||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  45156919 ctgatgacagtttatcattctatatttttagagtctttttatgatatttttgagttcacaagcaagctttagcagcaagaaaa 45156837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 10663990 - 10664055
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  10663990 aagaataggtgtagtataccaattagggaaacatagatgactcgaaagacctgatctcatctctct 10664055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 14421837 - 14421902
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  14421837 aagaataggtgcagtatatcaattaggggaacatagatgattcgaaagacctgatctcatctctct 14421902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 25231172 - 25231237
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  25231172 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcaactctct 25231237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 38248427 - 38248362
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  38248427 aagaatatgtgcaatataccaattaggggaacatagatgattcgaaagacctgatcgcatctctct 38248362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 12582420 - 12582471
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12582420 aaaaacgtgacacgattatggaaaccctaatttgggtggtttgttacacaag 12582471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 18825913 - 18825850
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  18825913 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 18825850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 25591504 - 25591441
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  25591504 aataggtgcagtataccaattaggggaacatagatgattcgaaacacctgatctcatctctctt 25591441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 36710662 - 36710599
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  36710662 gaataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctct 36710599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 25594685 - 25594619
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| ||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||    
T  25594685 aagaataggtgcagtatactaattaggggaagatagatgattcgaaagacctgatctcatctctctt 25594619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 45155297 - 45155223
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatctt 369  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||||| | ||||||    
T  45155297 aagaataggtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcagctctctccttatctt 45155223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 5981021 - 5980964
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  5981021 aaaaacatgacacgattatggaaaccctaatttgggtggtttgtttcacaaggaagaa 5980964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 10498242 - 10498177
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  10498242 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 10498177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 23619392 - 23619327
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  23619392 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 23619327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 33883378 - 33883329
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagac 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33883378 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagac 33883329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 5540973 - 5540917
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  5540973 atttttagagtctttttatgatatttttgagttcacaagcaagcataagcagcaaga 5540917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 14420886 - 14420945
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||||    
T  14420886 atttttagagtctttttatgatattttttagttcacaagcaagcttaagcaacaagaaaa 14420945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 18721309 - 18721258
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  18721309 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacct 18721258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 18824420 - 18824357
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||    
T  18824420 gaataggtgcagtataccaattaggggaacatcgatgattcgaaatacctgatctcatctctct 18824357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 18826834 - 18826771
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaa 183  Q
    |||||||||||| ||||||  |||||||||||||||||||||||| |||||| |||||||||||    
T  18826834 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaa 18826771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 30640505 - 30640587
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttt--tatgatatttttgaattcacaagcaagattaagcagcaagaaa 200  Q
    |||||||||||||||||| | |||||| ||| ||||||  ||||||| |||||| |||||||||||| |||||||||||||||    
T  30640505 tgatgacagtcaatcattcactattttaagaatctttttttatgatacttttgagttcacaagcaagcttaagcagcaagaaa 30640587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 369
Target Start/End: Original strand, 23643919 - 23643985
Alignment:
Q  303 gtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatctt 369  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||||| | ||||||    
T  23643919 gtgcagtataccaattaggggaacatcgatgattcgaacgacctgatatcatctctctccttatctt 23643985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 17895433 - 17895369
Alignment:
Q  196 agaaaaaactgaagaagctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    |||||||||||||||| |||||||   |||||||||||||||||||||||||||||| |||||||    
T  17895433 agaaaaaactgaagaaactgaaaagagggcatcgtgtcacgattactgaaaaacgtgtcacgatt 17895369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 17931072 - 17931137
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| || ||||||||||    
T  17931072 aagaataggtgcaatataccaattacggaaacatcgatgattcgaaagacctaatctcatctctct 17931137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 21279797 - 21279732
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||| |||  |||||||||    
T  21279797 aagaataggtgcagtataccaattaggggaacatcgatgattcgaaagacccgatcacatctctct 21279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 14589647 - 14589584
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||| |||| || ||||||||||    
T  14589647 gaataggtgcagtataccaattaggggaacatcgatgattcgaaatacctaatctcatctctct 14589584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 44027121 - 44027070
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  44027121 aagaatatgtgcattatatcaattaggggaacatagatgattcgaaagacct 44027070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 13196948 - 13197009
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatct 356  Q
    ||||||| ||||||||||||||||| |  ||||||||||||| |||||||||||| ||||||    
T  13196948 aagaataagtgcagtataccaattaagagaacatagatgatttgaaagacctgatctcatct 13197009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 31284765 - 31284830
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||| ||||| |  ||||||||||    
T  31284765 aagaataggtgcggtataccaattaggggaacatagatgattcgaatgacctaaactcatctctct 31284830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 33419747 - 33419812
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||| |||||||| |||||| |||||||||||||||| |  ||||||||||    
T  33419747 aagaataggtgcagtatacaaattaggggaacataaatgattcgaaagacctaaactcatctctct 33419812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 19792925 - 19793009
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttt-tatgatatttttgaattcacaagc-aagattaagcagcaagaaaa 201  Q
    ||||||||||||   |||| | ||||||||||||||||| |||||||||||||| ||||||||| |||||||| || ||||||||    
T  19792925 ctgatgacagtcggccattcactatttttagagtcttttttatgatatttttgagttcacaagcaaagattaaacaacaagaaaa 19793009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 30785025 - 30785108
Alignment:
Q  309 tataccaattagggaaacatagatgattcgaaagacctgatttca--tctctcttcatatcttctaactaaatctatattttct 390  Q
    |||||||||||||| ||| |||| ||||||||||||||||| |||  ||||||||||||| |||| | | ||||| ||||||||    
T  30785025 tataccaattaggggaacttagaggattcgaaagacctgatctcacctctctcttcatattttcttaatcaatctttattttct 30785108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 25228039 - 25228096
Alignment:
Q  144 ttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaa 202  Q
    |||||||||||||| ||||||||||||| |||||||||||| | ||| |||||||||||    
T  25228039 ttttagagtctttt-atgatatttttgagttcacaagcaagctcaagaagcaagaaaaa 25228096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 2560644 - 2560697
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctga 348  Q
    ||||||| |||||||||||||||||| ||||||| ||||| | |||||||||||    
T  2560644 aagaataggtgcagtataccaattagagaaacatcgatgacttgaaagacctga 2560697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 8911740 - 8911791
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||| |||||||||||||||||||| |||  ||| ||||||||||||||    
T  8911740 aagaataggtgcagtataccaattaggggaactcagaggattcgaaagacct 8911791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 5613745 - 5613668
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaa 373  Q
    |||||||||||  || | |||||||||| || | ||| ||||||||||||||||| |||||||||| ||||| ||||||    
T  5613745 aagaatatgtgatgtgtgccaattaggggaa-acagaggattcgaaagacctgatctcatctctctccatattttctaa 5613668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 10663011 - 10663075
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaag 184  Q
    |||||||||||| ||||| | |||||||||||||||||| |||||| | |||| ||||||||||||    
T  10663011 tgatgacagtcagtcattcactatttttagagtctttttcatgata-tgttgagttcacaagcaag 10663075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 5538801 - 5538737
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||| ||| |||||  ||||||| ||||||||  | |||||||||    
T  5538801 aagaataggtgcagtataccaatttggggaacatcaatgattcaaaagacctagtctcatctctc 5538737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 27203 - 27301
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  27203 aagaatagatgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 27301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 26277 - 26336
Alignment:
Q  143 tttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaa 202  Q
    ||||||||||||||||||||||||||||| |||||||||||   ||||||||| ||||||    
T  26277 tttttagagtctttttatgatatttttgagttcacaagcaaacataagcagcatgaaaaa 26336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 248612 - 248710
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||||    
T  248612 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaatcaaatctatattttctaac 248710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 9e-34; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 30655540 - 30655633
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  30655540 aagaataagtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 30655633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 28666177 - 28666044
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaaaactgaagaagctgaaa 218  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||       ||    
T  28666177 ctgatgacagtcagtcattcgttatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaaga-aaaactgaag-------aa 28666086  T
Q  219 aaggcatcgtgtcacgattactgaaaaacgtgacacgattat 260  Q
    | || ||| ||||||||| ||||||||||||| |||||||||    
T  28666085 agggaatcatgtcacgataactgaaaaacgtgtcacgattat 28666044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 118 - 258
Target Start/End: Original strand, 10289184 - 10289334
Alignment:
Q  118 cctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaaga--------aaaaactgaag 209  Q
    |||||||||||| | |||||   ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||        |||||| ||||    
T  10289184 cctgatgacagtaagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcaacaagaaaagcaagaaaaaccgaag 10289283  T
Q  210 aagctgaaaaa--ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    || ||||||||  || ||||||||| |||||||||||||||||||||||||    
T  10289284 aaactgaaaaaaggggatcgtgtcaagattactgaaaaacgtgacacgatt 10289334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 20185840 - 20185934
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||||||||||||||    
T  20185840 aagaataggtgcagtataccaattaggggaacatagatgattcgaaaaacctgatcttatctctcttcatattttctaaccaaatctatattttc 20185934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 22150151 - 22150057
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||||||||||||||    
T  22150151 aagaataggtgcagtataccaattaggggaacatagatgattcgaaaaacctgatcttatctctcttcatattttctaaccaaatctatattttc 22150057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 17106638 - 17106545
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||  ||||| ||||||    
T  17106638 aagaatatgtgcaatataccaattaggggaacatagatgattcgaaagacttgatctcatctctcttcatattttctaaccgaatctttatttt 17106545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 5738112 - 5738012
Alignment:
Q  295 aagaatatgtgcagtataccaattaggg-----aaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttc 389  Q
    ||||||| ||||||||||||||||||||      |||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  5738112 aagaataggtgcagtataccaattaggggaacataacatagatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttc 5738013  T
Q  390 t 390  Q
    |    
T  5738012 t 5738012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 10290068 - 10290166
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||| |||| | ||||| ||||| ||||||||||||    
T  10290068 aagaataagtgcagtataccaattcggggaacatagatgattcgaaagacctgatcttatctctctttatatttactaaccaaatccatattttctaac 10290166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 23842826 - 23842729
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||||| |||| ||||||||| ||||||||| |||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  23842826 aagaataagtgcaatataacaattaggggaacatagat-attcgaaagaactgatctcatctctcttcatattttctaaccaaatctatattttctaac 23842729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 296 - 393
Target Start/End: Original strand, 23847865 - 23847965
Alignment:
Q  296 agaatatgtgcagtataccaattagggaaacata---gatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaa 392  Q
    |||||| |||||||||||||||||||| || |||   |||||||||||||||||||| |||||||||||| ||| ||||||| |||||||||||||||||    
T  23847865 agaataggtgcagtataccaattaggggaatataaaagatgattcgaaagacctgatctcatctctcttcttattttctaaccaaatctatattttctaa 23847964  T
Q  393 c 393  Q
    |    
T  23847965 c 23847965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 9839422 - 9839345
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaa 373  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  9839422 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctc-tcatattttctaa 9839345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 9953035 - 9953117
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    ||||||||||||  ||||||   |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  9953035 ctgatgacagtctgtcatttcacatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 9953117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 11402353 - 11402418
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  11402353 aagaataggtgcagtataccaattagggaaacatagatgaatcgaaagacctgatctcatctctct 11402418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 9954059 - 9954125
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  9954059 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagagctgatctcatctctctt 9954125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 2379326 - 2379391
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  2379326 aagaataggtgcagtataccaattaggggaacatagatgatttgaaagacctgatctcatctctct 2379391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 10289388 - 10289445
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  10289388 aaaaacgtgacacgattatggaaaccctaattttggtggtttgttacacaaggaagaa 10289445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 14281548 - 14281483
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  14281548 aagaataggtgcagtatcccaattaggggaacatagatgattcgaaagacctgatgtcatctctct 14281483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 24400275 - 24400340
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  24400275 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagacctaaactcatctctct 24400340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 24410394 - 24410459
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  24410394 aagaataggtgcagtataccaattagggaaacatagatgattcgaaagacctaaactcatctctct 24410459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 26942461 - 26942398
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  26942461 gaataggtgcagtataccaattaggggaacatagatgaatcgaaagacctgatctcatctctct 26942398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 3596809 - 3596744
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||||||| || ||||||||||    
T  3596809 aagaataggtgcagtataccaattaggggaacataaatgattcgaaagacctaatctcatctctct 3596744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 4512572 - 4512637
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  4512572 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 4512637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 6513352 - 6513417
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||| ||||||||| || ||||||||||||||||||||||| ||||||||||    
T  6513352 aagaataggtgcagtatatcaattaggggaatatagatgattcgaaagacctgatctcatctctct 6513417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 13005285 - 13005350
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||||||    
T  13005285 aagaataggtgaagtataccaattaggggaacatagatgatttgaaagacctgatctcatctctct 13005350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 18856053 - 18855988
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  18856053 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 18855988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 19476098 - 19476163
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||  | |||||||||||    
T  19476098 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagaccaaaattcatctctct 19476163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 22561191 - 22561126
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||||||    
T  22561191 aagaataggtgcagtataccaattaggggaacgtagatgatttgaaagacctgatctcatctctct 22561126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 23384780 - 23384715
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||    
T  23384780 aagaataggtgcagtataccaattaggggaacatagatgaatcgaaagacctaatctcatctctct 23384715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 26896287 - 26896222
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  26896287 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 26896222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 13947114 - 13947165
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  13947114 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacct 13947165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 28665971 - 28665920
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  28665971 aaaaacgtgacacgattatggaaaccctaatttaggtggtttgttacacaag 28665920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 7128398 - 7128460
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  7128398 aatatgtgcattataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 7128460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 32109764 - 32109830
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||| |||| |||||||| ||||| |||||||||||||||||||| |||||||||||    
T  32109764 aagaataggtgcagcatacaaattaggggaacattgatgattcgaaagacctgatctcatctctctt 32109830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 2372349 - 2372414
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||  |||| ||| ||||||    
T  2372349 aagaatatgtgcagtataccaactaggggaacatagatgattcgaaagagatgatctcagctctct 2372414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 24155394 - 24155329
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||||||| |  ||||||||||    
T  24155394 aagaataggtgcagtataccaattaggggaacatatatgattcgaaagacctaaactcatctctct 24155329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 360
Target Start/End: Complemental strand, 28107803 - 28107750
Alignment:
Q  307 agtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  28107803 agtataccaattaggggaacatagatgattcgaaatacctgatatcatctctct 28107750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 11125725 - 11125662
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctct 358  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||||| ||||  |||||||    
T  11125725 aagaataggtgcagtataccaattaggggaacatcgatgattcgaaagacttgatcccatctct 11125662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 13004434 - 13004481
Alignment:
Q  154 tttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  13004434 tttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 13004481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 11729327 - 11729277
Alignment:
Q  338 gaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  11729327 gaaagacctgatctcatctctcttcatattttctaaccaaatctatatttt 11729277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 22561834 - 22561782
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaagg 294  Q
    ||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||    
T  22561834 aaaaacgtggcacaattttggaaaccctaatttgggtggtttgttacacaagg 22561782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 1125763 - 1125697
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| || ||||||||||||||||  |||||| |||||||||||||| || | |||||||||||    
T  1125763 aagaataggtccagtataccaattaggagaacataaatgattcgaaagacatgctctcatctctctt 1125697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 20181294 - 20181343
Alignment:
Q  141 tatttttagagtctttttatgatatttttgaattcacaagcaagattaag 190  Q
    ||||||||||||| |||| |||||||||||| |||||||||||| |||||    
T  20181294 tatttttagagtccttttgtgatatttttgagttcacaagcaagcttaag 20181343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 22154697 - 22154648
Alignment:
Q  141 tatttttagagtctttttatgatatttttgaattcacaagcaagattaag 190  Q
    ||||||||||||| |||| |||||||||||| |||||||||||| |||||    
T  22154697 tatttttagagtccttttgtgatatttttgagttcacaagcaagcttaag 22154648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 28230690 - 28230742
Alignment:
Q  295 aagaatatgtgcagtataccaatta-gggaaacatagatgattcgaaagacct 346  Q
    ||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||    
T  28230690 aagaataggtgcagtataccaattaggggtaacataaatgattcgaaagacct 28230742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 2846403 - 2846474
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatctt 369  Q
    |||| ||||||||||||||||||||  || |||| |||||||||||| |||| |||||| ||| | ||||||    
T  2846403 aataggtgcagtataccaattagggggacttagaggattcgaaagacttgatctcatctatctccttatctt 2846474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 157
Target Start/End: Complemental strand, 12987075 - 12987037
Alignment:
Q  119 ctgatgacagtcaatcatttattatttttagagtctttt 157  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  12987075 ctgatgacagtcaatcattcattatttttagggtctttt 12987037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 388
Target Start/End: Original strand, 23008174 - 23008250
Alignment:
Q  312 accaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    |||||||| ||||||  ||| |||||||||||| |||| |||||||||||| ||| ||| ||  |||||| ||||||    
T  23008174 accaattatggaaactcagaggattcgaaagacttgatctcatctctcttcttattttccaaacaaatctttatttt 23008250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 388
Target Start/End: Complemental strand, 23780190 - 23780114
Alignment:
Q  312 accaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatatttt 388  Q
    |||||||| ||||||  ||| |||||||||||| |||| |||||||||||| ||| ||| ||  |||||| ||||||    
T  23780190 accaattatggaaactcagaggattcgaaagacttgatctcatctctcttcttattttccaaacaaatctttatttt 23780114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 215 - 313
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||  |||||||    
T  215 aagaatatgtgcagtataccaattaggggaacatatatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctataaattctaac 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 71; Significance: 6e-32; HSPs: 4)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 4880 - 4723
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaa------------------gaaaa 201  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||                  |||||    
T  4880 tgatgacagtcagtcattcgttatttttagagtctttttatgatatttttgagttcacaaacaagattaagcagcaaaaaaagaaagaaaagcaagaaaa 4781  T
Q  202 aactgaagaagctgaaaaa-ggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4780 aactgaagaagctgaaaaaaggcatcgtgtcacgattactgaaaaacgtgacacgatt 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 8247 - 8149
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||| |||||    
T  8247 aagaataggtgtagtataccaattagggaaacataaatgattcgaaagacctgatcttatctctcttcatattttctaaccaaatctatatttcctaac 8149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 393
Target Start/End: Complemental strand, 1576 - 1479
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||||||||||| ||||| | |||||||||||||| ||||||| |||||| ||||| |||||    
T  1576 aagaataggtgcagtttaccaattagggaaa-atatatgattcgaaagatctgatctaatctctcttcatattttctaaccaaatctttatttcctaac 1479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 4687 - 4631
Alignment:
Q  243 aaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaaggaagaa 299  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  4687 aaaatgtgacacgattatagaaaccctaatttgggtggtttgttacacaaggaagaa 4631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 171 - 257
Alignment:
Q  307 agtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  171 agtataccaattaggggaacatatatgattcgaaagacctgatctcatctctcttcatattttctaaccaaatctatattttctaac 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 4563 - 4713
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcag---------caagaaaaaactgaaga 210  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||| ||||||||         |||||||||||||||||    
T  4563 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaatcaagaaaaaactgaaga 4662  T
Q  211 agctgaaaaa--ggcatcgtgtcacgattactg-aaaaacgtgacacgatt 258  Q
    | || |||||  |||||||||||||||||| || ||||||||| |||||||    
T  4663 aacttaaaaaagggcatcgtgtcacgattattgaaaaaacgtgtcacgatt 4713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 393
Target Start/End: Original strand, 5446 - 5544
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctcttcatatcttctaactaaatctatattttctaac 393  Q
    ||||||| ||||| |||| ||||||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||    
T  5446 aagaataggtgcactatatcaattaggggaatatagatgattcgaaagacctgatctcatctctcttcatattttctaaccgaatctatattttctaac 5544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 4767 - 4818
Alignment:
Q  242 aaaaacgtgacacgattatggaaaccttaatttgggtggtttgttacacaag 293  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  4767 aaaaacgtgacacgattatggaaaccctaatttgggtggtttattacacaag 4818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 59; Significance: 8e-25; HSPs: 4)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 1060 - 911
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaag---------aaaaaactgaaga 210  Q
    |||||||||||| |||||   || ||||||||| |||||||||||||||||| |||||||||||| ||||||||||||         |||||||||||||    
T  1060 tgatgacagtcagtcattcgctacttttagagtatttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaaactgaaga 961  T
Q  211 agctgaaa--aaggcatcgtgtcacgattactgaaaaacgtgacacgatt 258  Q
    | ||||||  | |||||||||||||||||||||||||| ||| |||||||    
T  960 aactgaaaagagggcatcgtgtcacgattactgaaaaatgtgtcacgatt 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 4396 - 4339
Alignment:
Q  144 ttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  4396 ttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 4339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 11526 - 11469
Alignment:
Q  144 ttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  11526 ttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 11469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 89 - 26
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||    
T  89 gaataggtgcagtataccaattaagggaacatcgatgattcgaaagacctgatctcatctctct 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 5426 - 5360
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  5426 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatctcatctctctt 5360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 6554 - 6472
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtcttttt-atgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| |||||   |||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||    
T  6554 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcacaggcaagcttaagcaacaagaaaa 6472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 3816 - 3751
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  3816 aagaataggtgcagtataccaattagggtaacatagatgattcgaaagacctgatctcatctctct 3751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 89866 - 89929
Alignment:
Q  297 gaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  89866 gaatatgtgcagtataccaattaggggaacttagatgattcgaaagacctgatctcatctctct 89929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 246328 - 246269
Alignment:
Q  142 atttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  246328 atttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 246269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 293117 - 293182
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  293117 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacttgatctcatctctct 293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 895 - 834
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatct 356  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  895 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgatatcatct 834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 7740 - 7675
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  7740 aagaataggtgcaatataccaattaggggaacatagatgattcgaaagacctgatctcatctctct 7675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 225 - 290
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  225 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacttgatctcatctctct 290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 19490 - 19555
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  19490 aagaataggtgcagtataccaattagaggaacatagatgattcgaaagacctgatctcatctctct 19555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 14344 - 14281
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  14344 aataggtgcagtataccaattaggggaacatcgatgattcgaaagacctgatctcatctctctt 14281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 1 - 55
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgat 349  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  1 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgat 55  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 279 - 345
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||||    
T  279 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagatctgatctcgtctctctt 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 4010 - 4076
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctctt 361  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||    
T  4010 aagaataggtgcagtataccaattagagaaacatagatgattcgaaagacctaaactcatctctctt 4076  T

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Target: scaffold0035 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 62611 - 62665
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgat 349  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  62611 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctgat 62665  T

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Target: scaffold0035; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 63953 - 64018
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |  ||||||||||    
T  63953 aagaataggtgcagtataccgattaggggaacatagatgattcgaaagacctaaactcatctctct 64018  T

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Target: scaffold0321 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 3033 - 2968
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  3033 aagaataggtgcagtataccaattaggggaacatagatgattcgaaagacctaaactcatctctct 2968  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 241597 - 241659
Alignment:
Q  298 aatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||    
T  241597 aataggtgcagtataccaattaggggaacatagatgattcgaaagatctgatctcatatctct 241659  T

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Target: scaffold1993 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1993
Description:

Target: scaffold1993; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 1045 - 1126
Alignment:
Q  120 tgatgacagtcaatcatttattatttttagagtctttttatgatatttttgaattcacaagcaagattaagcagcaagaaaa 201  Q
    |||||||||||| ||||||   ||||||||||||||||||||||||||| || |||| ||| ||| ||||||| ||||||||    
T  1045 tgatgacagtcagtcatttcacatttttagagtctttttatgatattttggagttcataaggaagcttaagcaccaagaaaa 1126  T

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Target: scaffold0066 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 57617 - 57552
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||| ||||||||||| |  |||||||||||||||||||||||||| ||||||||||    
T  57617 aagaataggtgcaatataccaattatgtgaacatagatgattcgaaagacctgatctcatctctct 57552  T

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Target: scaffold0048 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 15506 - 15571
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  15506 aagaataggtgcagtatcccaattaggggaacatagatgattcgaaagacctaaactcatctctct 15571  T

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Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 19374 - 19439
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||||||| |||  ||||||||||||||||||||||| |  ||||||||||    
T  19374 aagaataggtgcagtataccaatgaggtgaacatagatgattcgaaagacctaaactcatctctct 19439  T

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Target: scaffold0084; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 29459 - 29524
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctct 360  Q
    ||||||| ||||||||||  |||||||| ||||||||||||||||||||||| |  ||||||||||    
T  29459 aagaataggtgcagtataaaaattaggggaacatagatgattcgaaagacctaaactcatctctct 29524  T

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Target: scaffold1063 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 2595 - 2659
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| |||||||||||||||||||| ||||| ||||| |||||||||||  | |||||||||    
T  2595 aagaataggtgcagtataccaattaggggaacattgatgactcgaaagacctagtctcatctctc 2659  T

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Target: scaffold0065 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 58709 - 58661
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaaga 343  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  58709 aagaataggtgcagtatacaaattaggggaacatagatgattcgaaaga 58661  T

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Target: scaffold0218 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 10503 - 10554
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacct 346  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||| ||||    
T  10503 aagaataggtgcagtataccaattaggggaacatcgatgattcgaaatacct 10554  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 31188 - 31240
Alignment:
Q  295 aagaatatgtgcagtataccaatta-gggaaacatagatgattcgaaagacct 346  Q
    ||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||    
T  31188 aagaataggtgcagtataccaattaggggtaacataaatgattcgaaagacct 31240  T

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Target: scaffold0962 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 3310 - 3246
Alignment:
Q  295 aagaatatgtgcagtataccaattagggaaacatagatgattcgaaagacctgatttcatctctc 359  Q
    ||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||  | |||||||||    
T  3310 aagaataggtgcattataccaattatgggaacattgatgactcgaaagacctagtctcatctctc 3246  T

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