View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16682_high_16 (Length: 253)
Name: NF16682_high_16
Description: NF16682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16682_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 29047998 - 29047764
Alignment:
| Q |
1 |
gtattgtgtccttgtctttgataacaacttcaagagtagttgcttgttgattctccttggcaaatgcaaacaccaggttccattcaggactattgttttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29047998 |
gtattgtgtccttgtctttgataacaacttcaagagtagttgcttgttgattctccttggcaaatgcaaacaccaggttccattcaggactattgttttt |
29047899 |
T |
|
| Q |
101 |
ctcaaagtggttggtagttcctttgaagtttccaaccttgacaatcacatagggatcaaggctaccggtcaaatccatccttggaagatcgcgagctttc |
200 |
Q |
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||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29047898 |
ctcaaagtgattggttgttcctttgaagtttccaaccttgacaatcacatagggatcaaggctaccggtcaaatccatccttggaagatcgcgagctttc |
29047799 |
T |
|
| Q |
201 |
acaactcgtacgaaaagatagtccattggttctac |
235 |
Q |
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|||||||||| |||||||||||||||||||||||| |
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| T |
29047798 |
acaactcgtatgaaaagatagtccattggttctac |
29047764 |
T |
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