View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16682_low_12 (Length: 319)

Name: NF16682_low_12
Description: NF16682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16682_low_12
NF16682_low_12
[»] chr6 (48 HSPs)
chr6 (1-319)||(29518617-29518935)
chr6 (1-149)||(16454689-16454838)
chr6 (15-168)||(10074240-10074393)
chr6 (1-138)||(2579779-2579916)
chr6 (5-149)||(2578730-2578875)
chr6 (1-149)||(2579387-2579536)
chr6 (3-168)||(2377870-2378034)
chr6 (1-110)||(2579045-2579153)
chr6 (185-319)||(16107943-16108078)
chr6 (1-149)||(16107792-16107943)
chr6 (1-160)||(26544163-26544321)
chr6 (15-99)||(2975033-2975117)
chr6 (1-68)||(16455021-16455088)
chr6 (5-107)||(35210322-35210423)
chr6 (1-69)||(32741293-32741361)
chr6 (1-68)||(29519034-29519101)
chr6 (63-168)||(3409463-3409567)
chr6 (255-319)||(3409611-3409675)
chr6 (8-110)||(12071626-12071728)
chr6 (1-55)||(14748332-14748386)
chr6 (237-319)||(2378059-2378141)
chr6 (5-68)||(2578420-2578483)
chr6 (189-319)||(2579635-2579765)
chr6 (1-68)||(2843669-2843736)
chr6 (234-319)||(10074134-10074219)
chr6 (7-140)||(31714788-31714922)
chr6 (1-46)||(3409774-3409819)
chr6 (5-69)||(1846866-1846929)
chr6 (264-311)||(35210449-35210496)
chr6 (185-300)||(2579269-2579387)
chr6 (8-115)||(12084965-12085071)
chr6 (206-297)||(33605879-33605969)
chr6 (1-47)||(2378240-2378286)
chr6 (190-319)||(10073757-10073884)
chr6 (264-318)||(10074507-10074560)
chr6 (1-58)||(593694-593751)
chr6 (1-66)||(5832007-5832071)
chr6 (64-152)||(33605818-33605906)
chr6 (185-319)||(2578585-2578730)
chr6 (238-300)||(16454838-16454901)
chr6 (1-35)||(3409373-3409407)
chr6 (1-56)||(3415572-3415629)
chr6 (238-295)||(12092201-12092261)
chr6 (130-168)||(14789403-14789441)
chr6 (1-38)||(3409415-3409452)
chr6 (266-319)||(8481888-8481942)
chr6 (1-44)||(16108165-16108208)
chr6 (238-319)||(6071064-6071147)
[»] chr7 (52 HSPs)
chr7 (5-156)||(37533253-37533404)
chr7 (1-159)||(37532897-37533055)
chr7 (172-319)||(7553891-7554040)
chr7 (1-177)||(22566905-22567083)
chr7 (1-117)||(1085544-1085660)
chr7 (227-319)||(14681431-14681525)
chr7 (15-153)||(47129223-47129360)
chr7 (2-149)||(8128336-8128484)
chr7 (185-300)||(48243241-48243356)
chr7 (73-166)||(14681323-14681415)
chr7 (8-152)||(30245276-30245421)
chr7 (1-55)||(37167895-37167949)
chr7 (206-319)||(37345819-37345931)
chr7 (1-67)||(37532729-37532795)
chr7 (8-85)||(30253691-30253768)
chr7 (1-148)||(40094664-40094818)
chr7 (1-150)||(45433355-45433502)
chr7 (1-149)||(45754829-45754976)
chr7 (1-69)||(47129483-47129550)
chr7 (1-153)||(28300470-28300612)
chr7 (1-55)||(30032681-30032735)
chr7 (8-85)||(30244473-30244550)
chr7 (234-319)||(40094537-40094621)
chr7 (173-269)||(47129343-47129439)
chr7 (271-319)||(37533153-37533201)
chr7 (189-317)||(1085394-1085526)
chr7 (1-55)||(11845305-11845359)
chr7 (1-54)||(23368-23421)
chr7 (234-319)||(30244628-30244716)
chr7 (52-152)||(37345746-37345846)
chr7 (120-168)||(45697752-45697800)
chr7 (197-319)||(30245385-30245509)
chr7 (234-300)||(45697841-45697907)
chr7 (8-69)||(30245194-30245255)
chr7 (184-293)||(45434514-45434625)
chr7 (238-317)||(10342192-10342271)
chr7 (1-68)||(34218011-34218078)
chr7 (87-149)||(48243356-48243419)
chr7 (8-66)||(30253609-30253667)
chr7 (1-46)||(24177549-24177594)
chr7 (253-319)||(30245024-30245092)
chr7 (1-45)||(118299-118343)
chr7 (8-68)||(5825562-5825621)
chr7 (8-56)||(30244391-30244439)
chr7 (1-37)||(36939741-36939777)
chr7 (3-46)||(41854750-41854793)
chr7 (1-43)||(9901757-9901799)
chr7 (256-319)||(30244220-30244285)
chr7 (15-52)||(6054688-6054725)
chr7 (254-316)||(22566808-22566872)
chr7 (184-297)||(28300365-28300476)
chr7 (1-54)||(45434750-45434803)
[»] chr3 (58 HSPs)
chr3 (1-179)||(22303820-22303999)
chr3 (1-168)||(22304307-22304476)
chr3 (1-152)||(15772968-15773119)
chr3 (1-138)||(53577478-53577616)
chr3 (18-168)||(41360014-41360164)
chr3 (15-141)||(9239941-9240067)
chr3 (231-315)||(22304495-22304580)
chr3 (1-133)||(29644811-29644946)
chr3 (194-319)||(37990782-37990908)
chr3 (8-153)||(33803143-33803289)
chr3 (5-149)||(3135350-3135494)
chr3 (1-140)||(37990881-37991021)
chr3 (1-149)||(32462795-32462944)
chr3 (266-319)||(22304208-22304261)
chr3 (1-149)||(54018093-54018242)
chr3 (190-319)||(54017959-54018090)
chr3 (1-68)||(32589817-32589884)
chr3 (184-293)||(8328259-8328368)
chr3 (234-319)||(32462702-32462790)
chr3 (1-81)||(43346754-43346835)
chr3 (255-319)||(4823606-4823670)
chr3 (1-61)||(25755508-25755568)
chr3 (188-319)||(21832486-21832614)
chr3 (1-99)||(52634789-52634886)
chr3 (31-124)||(53577627-53577721)
chr3 (254-319)||(15773140-15773207)
chr3 (1-72)||(42342360-42342432)
chr3 (1-149)||(41359660-41359809)
chr3 (1-43)||(42342092-42342134)
chr3 (184-253)||(8328154-8328222)
chr3 (1-58)||(37990626-37990683)
chr3 (172-299)||(3135237-3135364)
chr3 (1-81)||(54017780-54017860)
chr3 (258-314)||(42342238-42342296)
chr3 (234-319)||(9240079-9240164)
chr3 (1-58)||(8328384-8328441)
chr3 (1-46)||(22304683-22304728)
chr3 (1-46)||(25739424-25739469)
chr3 (1-46)||(35946636-35946681)
chr3 (5-46)||(41359490-41359531)
chr3 (214-318)||(11661858-11661965)
chr3 (4-68)||(15773311-15773375)
chr3 (15-58)||(1634302-1634345)
chr3 (11-97)||(8328032-8328115)
chr3 (49-115)||(3135033-3135098)
chr3 (258-300)||(52634889-52634931)
chr3 (1-46)||(12114561-12114606)
chr3 (1-46)||(21832344-21832389)
chr3 (113-168)||(4823507-4823563)
chr3 (1-37)||(39934963-39934999)
chr3 (16-47)||(37726625-37726656)
chr3 (218-319)||(41359904-41360008)
chr3 (12-46)||(44160546-44160580)
chr3 (1-42)||(22303662-22303703)
chr3 (50-83)||(50329573-50329606)
chr3 (1-45)||(31190123-31190167)
chr3 (172-240)||(33803094-33803161)
chr3 (49-77)||(47157662-47157690)
[»] scaffold0734 (2 HSPs)
scaffold0734 (172-319)||(5643-5792)
scaffold0734 (1-153)||(5511-5661)
[»] chr1 (57 HSPs)
chr1 (1-149)||(44290720-44290868)
chr1 (16-168)||(50051902-50052053)
chr1 (36-168)||(48588739-48588870)
chr1 (1-168)||(48588364-48588532)
chr1 (1-165)||(11977058-11977224)
chr1 (1-177)||(26661766-26661942)
chr1 (1-153)||(34649552-34649705)
chr1 (1-151)||(66366-66516)
chr1 (1-319)||(34364621-34364940)
chr1 (3-110)||(31767097-31767203)
chr1 (231-319)||(50051794-50051883)
chr1 (12-148)||(22077392-22077528)
chr1 (238-319)||(3537290-3537372)
chr1 (231-319)||(44290601-44290690)
chr1 (227-317)||(48588633-48588724)
chr1 (1-107)||(9956023-9956129)
chr1 (12-152)||(22077722-22077862)
chr1 (8-99)||(37850547-37850637)
chr1 (185-319)||(37555990-37556126)
chr1 (2-110)||(41184341-41184451)
chr1 (189-289)||(41184198-41184298)
chr1 (202-316)||(66235-66349)
chr1 (237-319)||(22077638-22077719)
chr1 (1-149)||(37555843-37555990)
chr1 (5-150)||(41157109-41157257)
chr1 (214-319)||(26661665-26661773)
chr1 (1-45)||(3537599-3537643)
chr1 (3-55)||(44290448-44290500)
chr1 (188-319)||(22077265-22077393)
chr1 (1-68)||(45084490-45084557)
chr1 (234-319)||(47379928-47380012)
chr1 (1-47)||(41142487-41142533)
chr1 (238-319)||(24448212-24448292)
chr1 (68-159)||(3537410-3537496)
chr1 (1-45)||(32168698-32168742)
chr1 (254-319)||(41157323-41157390)
chr1 (15-82)||(17294706-17294773)
chr1 (15-61)||(3875315-3875361)
chr1 (1-47)||(11977394-11977440)
chr1 (5-55)||(21378049-21378099)
chr1 (253-299)||(30630800-30630846)
chr1 (235-319)||(50469224-50469306)
chr1 (224-289)||(3537495-3537562)
chr1 (234-300)||(1188392-1188457)
chr1 (9-47)||(14318989-14319027)
chr1 (1-55)||(40082520-40082574)
chr1 (3-44)||(41157491-41157532)
chr1 (1-45)||(41759597-41759641)
chr1 (16-68)||(50051666-50051718)
chr1 (12-46)||(22077109-22077143)
chr1 (1-46)||(26661521-26661566)
chr1 (63-96)||(30630586-30630619)
chr1 (1-30)||(38804370-38804399)
chr1 (1-46)||(45493973-45494018)
chr1 (1-45)||(5319965-5320009)
chr1 (63-151)||(47380060-47380148)
chr1 (258-319)||(47380261-47380323)
[»] chr8 (65 HSPs)
chr8 (1-168)||(1014122-1014289)
chr8 (15-168)||(9309109-9309262)
chr8 (1-168)||(3669801-3669967)
chr8 (218-319)||(3669973-3670075)
chr8 (227-319)||(1014014-1014107)
chr8 (189-292)||(3038099-3038202)
chr8 (1-118)||(18371921-18372038)
chr8 (191-319)||(40518470-40518597)
chr8 (1-117)||(34834990-34835104)
chr8 (1-153)||(147565-147718)
chr8 (1-110)||(40518185-40518294)
chr8 (184-319)||(147712-147844)
chr8 (1-115)||(18372214-18372328)
chr8 (1-117)||(3038217-3038334)
chr8 (8-138)||(3037874-3038006)
chr8 (188-318)||(8918908-8919039)
chr8 (3-145)||(37544391-37544532)
chr8 (194-319)||(18372514-18372640)
chr8 (207-319)||(45122907-45123021)
chr8 (256-319)||(6731856-6731919)
chr8 (1-56)||(40579258-40579313)
chr8 (253-319)||(18372399-18372465)
chr8 (1-45)||(5915981-5916025)
chr8 (5-148)||(8919042-8919184)
chr8 (194-297)||(18371821-18371925)
chr8 (5-149)||(9483084-9483227)
chr8 (1-55)||(6876852-6876906)
chr8 (237-319)||(30359539-30359624)
chr8 (1-140)||(45122738-45122882)
chr8 (1-41)||(3670174-3670214)
chr8 (254-319)||(9309303-9309370)
chr8 (1-41)||(9482608-9482648)
chr8 (1-68)||(30441199-30441266)
chr8 (66-151)||(9608932-9609018)
chr8 (259-300)||(34835427-34835468)
chr8 (259-300)||(34835693-34835734)
chr8 (184-300)||(45122515-45122627)
chr8 (15-55)||(9309482-9309522)
chr8 (205-300)||(9482766-9482857)
chr8 (5-85)||(40579466-40579546)
chr8 (8-99)||(9620624-9620715)
chr8 (1-68)||(20870550-20870617)
chr8 (1-117)||(30359385-30359500)
chr8 (1-60)||(41129102-41129161)
chr8 (253-319)||(18372842-18372907)
chr8 (254-300)||(45121819-45121865)
chr8 (238-294)||(4154449-4154506)
chr8 (1-46)||(6651608-6651653)
chr8 (65-149)||(9482921-9483005)
chr8 (2-55)||(34835324-34835377)
chr8 (2-55)||(34835590-34835643)
chr8 (2-55)||(34835856-34835909)
chr8 (2-43)||(40518697-40518738)
chr8 (1-54)||(43274626-43274679)
chr8 (9-68)||(18371637-18371697)
chr8 (1-45)||(25561815-25561859)
chr8 (254-319)||(43274710-43274777)
chr8 (1-40)||(9608859-9608898)
chr8 (238-300)||(18373094-18373157)
chr8 (23-75)||(3038020-3038074)
chr8 (1-99)||(4154614-4154712)
chr8 (8-37)||(1013879-1013908)
chr8 (1-46)||(1513914-1513959)
chr8 (185-222)||(9483047-9483084)
chr8 (1-37)||(6732009-6732045)
[»] chr4 (66 HSPs)
chr4 (3-163)||(3340923-3341083)
chr4 (12-148)||(45496675-45496812)
chr4 (4-179)||(10246036-10246212)
chr4 (1-319)||(44621116-44621441)
chr4 (1-168)||(41370471-41370637)
chr4 (1-153)||(20825950-20826104)
chr4 (1-150)||(23817572-23817723)
chr4 (1-144)||(39404132-39404276)
chr4 (175-319)||(39404273-39404413)
chr4 (1-109)||(44620773-44620880)
chr4 (190-319)||(2740956-2741086)
chr4 (184-319)||(54108796-54108930)
chr4 (3-110)||(49076766-49076871)
chr4 (172-299)||(20826086-20826213)
chr4 (73-168)||(18933008-18933102)
chr4 (1-149)||(31691268-31691415)
chr4 (172-300)||(16889315-16889444)
chr4 (1-98)||(19895410-19895506)
chr4 (1-150)||(16889429-16889578)
chr4 (15-149)||(2740826-2740953)
chr4 (1-108)||(22028303-22028411)
chr4 (1-61)||(11702281-11702341)
chr4 (1-85)||(25483450-25483534)
chr4 (238-319)||(44620592-44620675)
chr4 (190-319)||(49076589-49076722)
chr4 (1-110)||(44620467-44620568)
chr4 (1-61)||(39792842-39792902)
chr4 (8-149)||(43174262-43174405)
chr4 (237-319)||(18932901-18932983)
chr4 (172-293)||(45489501-45489622)
chr4 (184-284)||(22028163-22028263)
chr4 (239-319)||(36629172-36629252)
chr4 (1-58)||(36629351-36629408)
chr4 (1-58)||(43827553-43827610)
chr4 (1-85)||(50002540-50002625)
chr4 (3-150)||(54108653-54108799)
chr4 (8-68)||(34004560-34004620)
chr4 (1-38)||(32941128-32941165)
chr4 (15-68)||(36608636-36608689)
chr4 (1-58)||(50630740-50630797)
chr4 (7-55)||(49076439-49076487)
chr4 (1-44)||(1731646-1731689)
chr4 (1-44)||(39404512-39404555)
chr4 (1-44)||(50459835-50459878)
chr4 (8-46)||(22183261-22183299)
chr4 (1-55)||(54017583-54017637)
chr4 (1-47)||(54343004-54343050)
chr4 (1-42)||(4390102-4390143)
chr4 (68-148)||(50627668-50627748)
chr4 (1-46)||(55933121-55933166)
chr4 (1-41)||(23817457-23817497)
chr4 (49-81)||(27426771-27426803)
chr4 (1-45)||(36572133-36572177)
chr4 (1-69)||(39698918-39698986)
chr4 (234-285)||(41707340-41707392)
chr4 (15-55)||(54936323-54936363)
chr4 (16-99)||(11783498-11783580)
chr4 (9-68)||(18879928-18879987)
chr4 (253-319)||(3244592-3244657)
chr4 (261-291)||(5882092-5882122)
chr4 (1-35)||(52884810-52884844)
chr4 (1-35)||(54109026-54109060)
chr4 (261-319)||(3341083-3341143)
chr4 (185-258)||(43174405-43174477)
chr4 (1-69)||(22027935-22028003)
chr4 (275-319)||(41370673-41370716)
[»] chr5 (54 HSPs)
chr5 (1-166)||(6500564-6500729)
chr5 (1-152)||(38427333-38427486)
chr5 (1-156)||(32487507-32487661)
chr5 (21-168)||(9498534-9498679)
chr5 (184-319)||(624077-624211)
chr5 (231-319)||(6500749-6500838)
chr5 (172-319)||(13415903-13416051)
chr5 (1-145)||(25328049-25328195)
chr5 (192-300)||(3295180-3295287)
chr5 (1-152)||(3295246-3295389)
chr5 (5-117)||(299607-299720)
chr5 (8-150)||(623939-624080)
chr5 (241-319)||(24489347-24489424)
chr5 (1-55)||(42405588-42405642)
chr5 (5-110)||(6224314-6224418)
chr5 (1-145)||(26075058-26075205)
chr5 (1-68)||(27502013-27502080)
chr5 (1-68)||(40296292-40296359)
chr5 (1-67)||(3294993-3295059)
chr5 (1-79)||(6500936-6501015)
chr5 (8-58)||(1028504-1028554)
chr5 (218-299)||(9498411-9498493)
chr5 (1-55)||(15370213-15370267)
chr5 (238-319)||(36522039-36522120)
chr5 (253-319)||(26074925-26074993)
chr5 (238-319)||(31509555-31509638)
chr5 (1-70)||(34753001-34753069)
chr5 (50-153)||(13416033-13416136)
chr5 (1-60)||(15370516-15370575)
chr5 (1-44)||(36492218-36492261)
chr5 (184-293)||(35150607-35150719)
chr5 (1-46)||(41632896-41632941)
chr5 (172-299)||(26074477-26074605)
chr5 (8-55)||(624317-624364)
chr5 (1-68)||(26899995-26900061)
chr5 (34-153)||(35150491-35150613)
chr5 (3-80)||(12662614-12662694)
chr5 (234-319)||(13785752-13785837)
chr5 (8-58)||(36568556-36568606)
chr5 (241-319)||(36522380-36522459)
chr5 (208-300)||(38427461-38427553)
chr5 (1-41)||(18603124-18603164)
chr5 (1-52)||(11416970-11417021)
chr5 (17-168)||(13785879-13786029)
chr5 (272-316)||(15370380-15370426)
chr5 (15-110)||(35150134-35150228)
chr5 (3-46)||(41170750-41170793)
chr5 (25-107)||(3622828-3622910)
chr5 (1-31)||(13415774-13415804)
chr5 (277-319)||(26074289-26074330)
chr5 (64-109)||(24489515-24489560)
chr5 (9-68)||(795081-795141)
chr5 (8-44)||(24489207-24489243)
chr5 (1-41)||(33747885-33747925)
[»] chr2 (60 HSPs)
chr2 (1-143)||(36178508-36178649)
chr2 (1-117)||(37106038-37106154)
chr2 (1-178)||(29676643-29676819)
chr2 (1-168)||(14745544-14745711)
chr2 (8-153)||(7598349-7598494)
chr2 (176-319)||(3672954-3673100)
chr2 (5-168)||(5542876-5543038)
chr2 (1-151)||(6421499-6421648)
chr2 (1-153)||(23346350-23346502)
chr2 (172-319)||(36785706-36785854)
chr2 (1-105)||(42514763-42514866)
chr2 (8-110)||(6421852-6421954)
chr2 (231-319)||(5542768-5542857)
chr2 (1-110)||(35580659-35580768)
chr2 (2-109)||(962713-962818)
chr2 (188-319)||(42514899-42515027)
chr2 (184-319)||(7598488-7598624)
chr2 (238-319)||(40679772-40679852)
chr2 (7-152)||(40734002-40734149)
chr2 (1-68)||(5542602-5542669)
chr2 (232-319)||(14745437-14745524)
chr2 (196-319)||(38796361-38796487)
chr2 (1-68)||(36178148-36178215)
chr2 (272-319)||(37106156-37106203)
chr2 (237-299)||(40733813-40733876)
chr2 (190-319)||(28531457-28531583)
chr2 (271-319)||(36178412-36178460)
chr2 (9-153)||(3672823-3672968)
chr2 (177-287)||(23346489-23346594)
chr2 (238-319)||(41678512-41678593)
chr2 (184-296)||(6421996-6422109)
chr2 (1-43)||(37106302-37106344)
chr2 (1-46)||(6422224-6422269)
chr2 (1-69)||(6713091-6713160)
chr2 (1-58)||(41283462-41283519)
chr2 (1-53)||(15880377-15880429)
chr2 (254-319)||(29676851-29676918)
chr2 (259-299)||(40734231-40734271)
chr2 (9-80)||(30312912-30312983)
chr2 (238-292)||(30313110-30313165)
chr2 (1-68)||(31899080-31899146)
chr2 (1-55)||(3673182-3673236)
chr2 (238-295)||(30323396-30323454)
chr2 (1-55)||(36005870-36005924)
chr2 (1-70)||(1770006-1770075)
chr2 (1-58)||(16590997-16591054)
chr2 (248-300)||(34481589-34481642)
chr2 (1-45)||(15511495-15511539)
chr2 (63-111)||(36785880-36785927)
chr2 (1-43)||(33731762-33731804)
chr2 (261-299)||(40733472-40733510)
chr2 (254-319)||(33561594-33561658)
chr2 (238-319)||(33953914-33953994)
chr2 (257-315)||(35580532-35580592)
chr2 (1-42)||(40679632-40679673)
chr2 (66-153)||(40733698-40733777)
chr2 (172-220)||(6421632-6421679)
chr2 (15-83)||(12911432-12911500)
chr2 (8-80)||(30313298-30313370)
chr2 (40-168)||(37894968-37895094)
[»] scaffold0702 (3 HSPs)
scaffold0702 (3-168)||(392-556)
scaffold0702 (237-319)||(285-367)
scaffold0702 (1-47)||(145-191)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-168)||(5096-5262)
scaffold0078 (218-319)||(5268-5372)
[»] scaffold0391 (6 HSPs)
scaffold0391 (172-319)||(1249-1398)
scaffold0391 (15-137)||(1591-1713)
scaffold0391 (196-319)||(3128-3254)
scaffold0391 (69-150)||(1383-1465)
scaffold0391 (189-298)||(1464-1575)
scaffold0391 (1-55)||(1096-1150)
[»] scaffold0171 (1 HSPs)
scaffold0171 (257-319)||(17599-17663)
[»] scaffold0113 (2 HSPs)
scaffold0113 (238-319)||(39771-39853)
scaffold0113 (49-105)||(39616-39672)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-46)||(47474-47519)


Alignment Details
Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 29518617 - 29518935
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||    
T  29518617 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcctctcataacccaacagtggtatcagagccccggttcgacgaagggtg 29518716  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacggcagtgcaagcagtgtcggtccg 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29518717 cgaccgagaccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacggcagtgcaagcagtgtcggtccg 29518816  T
Q  201 tttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29518817 tttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 29518916  T
Q  301 gtttgcaagtgtgagttat 319  Q
    |||||||||||||||||||    
T  29518917 gtttgcaagtgtgagttat 29518935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16454689 - 16454838
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| |||||||||||||||     
T  16454689 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagctcccctcgtgacccaacagtggtatcagagcccaggttcgacgaagggta 16454788  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
    |||||||||   |||||  | |||||||||||||| ||||||||||||||    
T  16454789 cgaccgaggtaaccggtccgtttgcgcagaaagcaacaacgacggtacaa 16454838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 10074393 - 10074240
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgcc 114  Q
    |||||||||||||||||||||||  |||||||  ||||||||  ||| |||||  | |||||||||||||||||||| ||||||| ||||||||||||||    
T  10074393 ggttgttctagcctcgatgtggatagtcccccaggctccccttgtgacccaactcttgtatcagagccccggttcgaagaagggtacgaccgaggccgcc 10074294  T
Q  115 ggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  10074293 ggtcagttgcgcagaaagtagcaacgacggtacaagcagcaagtggctcattgt 10074240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 2579916 - 2579779
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||| | ||||||||||||||||||||||||||| |||||||||     
T  2579916 tctcttgcttgtgcggttgttctagcctcgatgtggaaggtccccaa-gctcccctcattacccaacagtggtatcagagccccggttccacgaagggta 2579818  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaa 138  Q
    |||||||||| ||| ||| | ||||||||||||||||||    
T  2579817 cgaccgaggcagccagttcgtttgcgcagaaagcagcaa 2579779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 2578875 - 2578730
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgac 104  Q
    ||||||||| |||||||||  |||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  2578875 ttgcttgtgtggttgttctgacctcgatgtggacggtcccccaggctcccctcatgaatcaacagtggtatcagagccccggttcgacgaagggtacgac 2578776  T
Q  105 cgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
    |||||| ||||||  | ||| |||||||||||||||| || |||||    
T  2578775 cgaggcagccggtccgcttgggcagaaagcagcaacggcgttacaa 2578730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 2579536 - 2579387
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| |||||||||| |||||||||||| ||| || |  |||||||||| ||  |||||||||||||||||||||||||||||||| |||     
T  2579536 tctcttgcttgtgtggttgttctaacctcgatgtggatggttccacaggctcccctcacgaatcaacagtggtatcagagccccggttcgacgaacggta 2579437  T
Q  101 cgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaa 149  Q
    |||||||||| ||||||  | |||||||||||||||||||| ||||||||    
T  2579436 cgaccgaggcagccggtccacttgcgcagaaagcagcaacggcggtacaa 2579387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 2377870 - 2378034
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcg 102  Q
    ||||||||| | |||| |||||||||||||||||| ||||||||| ||| |||   ||| |||||||||||||||||||||||||||||||||||||||     
T  2377870 tcttgcttgagtggtttttctagcctcgatgtggaaggtcccccgagcttccccagtgacccaacagtggtatcagagccccggttcgacgaagggtgca 2377969  T
Q  103 accgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    |||||||  | ||| | |||||| ||||||  |||||  | |||||||||||||||||||||||||    
T  2377970 accgaggtagtcgg-tcgttgcgaagaaagtcgcaacagcagtacaagcagcaagtggctccttgt 2378034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2579153 - 2579045
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| | ||||||||||||| ||||||||| |||||||| ||||||||||||||||||     
T  2579153 tctcttgctcgtgtggttgttctagcctcgatgtgcacggtcccc-gagctcccctcatgacccaacagtgatatcagagtcccggttcgacgaagggta 2579055  T
Q  101 cgaccgaggc 110  Q
    ||||||||||    
T  2579054 cgaccgaggc 2579045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 16107943 - 16108078
Alignment:
Q  185 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacac 284  Q
    |||||||||||||| ||||| | ||||||||||||||| ||  || | |||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  16107943 aagcagtgtcggtctgtttgcgaagaaaccagcaacggcgatgcaag-aaagtaagagcttccgcttgaaggggagcatgatgaattgatggactcacac 16108041  T
Q  285 ttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||||||  || | ||||||||||||||    
T  16108042 ttgagggggagtgttgttgtgtacaagtgtgagttat 16108078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16107792 - 16107943
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccct-ca-tgatccaacagtggtatcagagccccggttcgacgaaggg 98  Q
    ||||||||||||||||||| ||||||||||||||||  ||| ||||   ||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  16107792 tctcttgcttgtgcggttgctctagcctcgatgtgggtggtacccctaactccccttcagtgacccaacagtggtatcagagccccggttcgacgaaggg 16107891  T
Q  99 tgcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaa 149  Q
    |  ||||||||| ||||||  | ||| |||||||||||||||| ||||||||    
T  16107892 tatgaccgaggcagccggtccatttgtgcagaaagcagcaacggcggtacaa 16107943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 26544163 - 26544321
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||||| ||||||||||||| ||||| |  |||||||| ||| |||   ||| |||||| |||||| ||||||||||||||| ||||||||    
T  26544163 tctcttgcttgtgcgattgttctagcctcaatgtgaagagtcccccgagcttccccagtgacccaacactggtattagagccccggttcgatgaagggtg 26544262  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtgg 160  Q
    |||||||||| ||||| || ||||| ||||||| ||||||  ||||||| ||||||||||    
T  26544263 cgaccgaggcagccgg-tatttgcgtagaaagccgcaacgctggtacaaacagcaagtgg 26544321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 2975033 - 2975117
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||    
T  2975033 ggttgttctagcctcgatgtggcaggtcccacgcgctcctctcatgatccaacagtgatatcagagccccggttcgaagaagggt 2975117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16455021 - 16455088
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  16455021 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagctcccctcataatccaaca 16455088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 35210322 - 35210423
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgac 104  Q
    ||||||||||||||| ||||||||||||||||||||||||| | |||||||   ||| ||||||||||||||| |||| |||||||||||||||| ||||    
T  35210322 ttgcttgtgcggttgctctagcctcgatgtggacggtcccctg-gctcccccagtgacccaacagtggtatcaaagcctcggttcgacgaagggtacgac 35210420  T
Q  105 cga 107  Q
    |||    
T  35210421 cga 35210423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32741293 - 32741361
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||    
T  32741293 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcctctcataacccaacag 32741361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29519034 - 29519101
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  29519034 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcctctcataacccaaca 29519101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 3409463 - 3409567
Alignment:
Q  63 ccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggct 162  Q
    |||| |||||||||||||||||||||||||||||  |  ||||||||| ||||||  |||||| | |||||||||||| ||||||||| |||||||||||    
T  3409463 ccaatagtggtatcagagccccggttcgacgaagtatatgaccgaggcagccggtc-gttgcgtaaaaagcagcaacggcggtacaagtagcaagtggct 3409561  T
Q  163 ccttgt 168  Q
    ||||||    
T  3409562 ccttgt 3409567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 3409611 - 3409675
Alignment:
Q  255 ggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3409611 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 3409675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 12071728 - 12071626
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 107  Q
    |||||| ||||||||||||||||||||| |||||||||   ||||||||||||| | |||||||||||||||| |||| ||||| |||| || ||||| |    
T  12071728 cttgtgtggttgttctagcctcgatgtgaacggtcccctaagctcccctcatgacctaacagtggtatcagagtcccgattcgatgaagagtacgaccaa 12071629  T
Q  108 ggc 110  Q
    |||    
T  12071628 ggc 12071626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14748386 - 14748332
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14748386 tctcttgcttgtgtggttgttctagcctcgatgtggacggtcccccgcgctcccc 14748332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 2378059 - 2378141
Alignment:
Q  237 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||| |||||| ||||||||| |||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2378059 taagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttggtttgcaagtgtgagttat 2378141  T

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Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 2578483 - 2578420
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||||||||||||||||||||||||||||||||  || |||||||||| ||||||    
T  2578483 ttgcttgtgcggttgttctagcctcgatgtggacggtccccctagcccccctcatgacccaaca 2578420  T

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Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 2579765 - 2579635
Alignment:
Q  189 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttg 287  Q
    |||| |||||| |||| |||||||||| |||| |||| |||  ||||||||||||||  |||||| |||||| || ||||||| || |||||||||||||    
T  2579765 agtgacggtccatttgcggagaaaccaacaacagagatacaaacaaagtaagagctttcgcttgaagggggaccatgatgaatagacggactcacacttg 2579666  T
Q  288 agggggagtgttggtttgcaagtgtgagttat 319  Q
    |||| ||||||| ||| ||| |||||||||||    
T  2579665 agggagagtgtt-gttagcaggtgtgagttat 2579635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2843669 - 2843736
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  2843669 tctcttgcttgagtggttgttctagcctcgatgtggacggtccccctaactcccctcatgatccaaca 2843736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 10074219 - 10074134
Alignment:
Q  234 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||| |||||| ||||||||| ||||||||||| ||||| |||||||||||||||||| || |||||| |||||||||    
T  10074219 aagtaagagcttccgcttgaagggggagcatgatgaattgatagactcgcacttgagggggagtgtt-gtgtgcaagggtgagttat 10074134  T

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Target: chr6; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 31714788 - 31714922
Alignment:
Q  7 gcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcagagccccggttcgacgaagggtgcgacc 105  Q
    ||||||| ||||| |||||||||||||||||||||| |||   |||||||| |||| ||||| |||| || |||| ||||||| |||||||||| |||||    
T  31714788 gcttgtgtggttgctctagcctcgatgtggacggtctcccagactcccctcaatgacccaactgtggaattagagtcccggtttgacgaagggtacgacc 31714887  T
Q  106 gaggccgccggttagttgcgcagaaagcagcaacg 140  Q
    |||||  | |||   ||| ||||||||||||||||    
T  31714888 gaggcaactggtgttttgtgcagaaagcagcaacg 31714922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3409774 - 3409819
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3409774 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 3409819  T

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Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 1846866 - 1846929
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||    
T  1846866 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagcttccc-catgacccaacag 1846929  T

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Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 35210449 - 35210496
Alignment:
Q  264 gatgaattgatggactcacacttgagggggagtgttggtttgcaagtg 311  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  35210449 gatggattgatggactcacacttgagggggagtgttggtttgcaagtg 35210496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 300
Target Start/End: Complemental strand, 2579387 - 2579269
Alignment:
Q  185 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgag-ggggagcac---gatgaattgatggactc 280  Q
    |||| ||||||||| |||||  |||||||||||||||| || |||  ||| ||||||||||| ||||||  ||||||||    ||||||| |||||||||    
T  2579387 aagcggtgtcggtctgtttgcagagaaaccagcaacggcgatacaaacaa-gtaagagcttccgcttgaaaggggagcaacatgatgaatagatggactc 2579289  T
Q  281 acacttgagggggagtgttg 300  Q
    ||||||||||||||||||||    
T  2579288 acacttgagggggagtgttg 2579269  T

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Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 12085071 - 12084965
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 107  Q
    |||||| ||||||||||||||||||| | |||||| ||   ||||||||||||| || ||||||||||||||| ||||||| || |||| || |||| ||    
T  12085071 cttgtgtggttgttctagcctcgatgcgaacggtctcctaagctcccctcatga-cccacagtggtatcagagtcccggtttgatgaagagtacgactga 12084973  T
Q  108 ggccgccg 115  Q
    ||| ||||    
T  12084972 ggcagccg 12084965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 33605879 - 33605969
Alignment:
Q  206 ggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtg 297  Q
    ||||||||||||||||  || ||| |||| ||||||||||| ||| || |  | ||||| ||||||||||||||||||||||||||||||||    
T  33605879 ggagaaaccagcaacgacgatacaagcaa-gtaagagcttccgctcgaagaagggcacggtgaattgatggactcacacttgagggggagtg 33605969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2378240 - 2378286
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 47  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||    
T  2378240 tctcttgcttgagtggttgttctagcctcgatgtggacggtcccccg 2378286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 10073884 - 10073757
Alignment:
Q  190 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttga 288  Q
    ||||||||||||| | |||||||||| |||| | || ||| | ||||||||| |||| |||||| |||||| || ||||||||||||||||||||||| |    
T  10073884 gtgtcggtccgtt-gcggagaaaccatcaacagtgatacaag-aaagtaagaccttccgcttgaagggggaacatgatgaattgatggactcacacttaa 10073787  T
Q  289 gggggagtgttggtttgcaagtgtgagttat 319  Q
    | ||| ||||| || ||||||||| ||||||    
T  10073786 gagggggtgtt-gtgtgcaagtgttagttat 10073757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 10074560 - 10074507
Alignment:
Q  264 gatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagtta 318  Q
    ||||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  10074560 gatgaattgatggactcacacttaagggggagtgtt-gtgtgcaagtgtgagtta 10074507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 593751 - 593694
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    |||||| ||||| |||||||||||| |||||||| |||||||||||| ||||||||||    
T  593751 tctcttacttgtacggttgttctaggctcgatgttgacggtcccccgagctcccctca 593694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5832071 - 5832007
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaa 66  Q
    |||||| |||||| |||||||||||||||||||| |||||||||| | ||||||||||||| ||||    
T  5832071 tctcttacttgtgtggttgttctagcctcgatgtagacggtccccag-gctcccctcatgacccaa 5832007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 33605818 - 33605906
Alignment:
Q  64 caacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagca 152  Q
    |||||||||||| ||||||| | | |||||||||||  ||||||||| |||| |  |||||| ||||| ||||||||||| ||||||||    
T  33605818 caacagtggtattagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgcggagaaaccagcaacgacgatacaagca 33605906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 2578730 - 2578585
Alignment:
Q  185 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaaga------gcttctgcttga----gggggagcacgatgaattgat 274  Q
    |||||||||||||| ||||| |||||||||| |||||| || ||| || ||||||||      ||||| ||||||    || | |||| ||||||| |||    
T  2578730 aagcagtgtcggtctgtttgcggagaaaccaacaacggcgatacaagc-aagtaagagcttccgcttccgcttgaaaagggagcagcatgatgaatagat 2578632  T
Q  275 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||||||||||||||||  || | ||||||||||||||    
T  2578631 ggactcacacttgagggggagtgttgttgtgtacaagtgtgagttat 2578585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 16454838 - 16454901
Alignment:
Q  238 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    ||||||||| |||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||    
T  16454838 aagagcttccgcttgaagggggagcatgctgaattgatggagtcacagttgagggggagtgttg 16454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 3409373 - 3409407
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtg 35  Q
    |||||||||||||||||||||||||||||||||||    
T  3409373 tctcttgcttgtgcggttgttctagcctcgatgtg 3409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3415572 - 3415629
Alignment:
Q  1 tctcttgcttgtgcggttgttct--agcctcgatgtggacggtcccccgcgctcccct 56  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||  ||||||||    
T  3415572 tctcttgcttgtgcggttgttctctagcctcgatgtggaaggtcccccaagctcccct 3415629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 12092261 - 12092201
Alignment:
Q  238 aagagcttctgcttgaggggg---agcacgatgaattgatggactcacacttgagggggag 295  Q
    ||||||||| ||| |||||||   |||| ||||||||||||||||||||||||||||||||    
T  12092261 aagagcttccgctagaggggggtgagcatgatgaattgatggactcacacttgagggggag 12092201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 14789441 - 14789403
Alignment:
Q  130 aagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  14789441 aagcagcaacgacggtaaaagcagcaagtggctccttgt 14789403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3409415 - 3409452
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggac 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3409415 tctcttgcttatgcggttgttctagcctcgatgtggac 3409452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 8481888 - 8481942
Alignment:
Q  266 tgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||||||||||||||||||||  |||| || ||||||||||||||||    
T  8481888 tgaattgatggactcacacttgagggggagattgtt-gtgtgcaagtgtgagttat 8481942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16108165 - 16108208
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 44  Q
    ||||||||||||| ||||||| || |||||||||||||||||||    
T  16108165 tctcttgcttgtggggttgttataacctcgatgtggacggtccc 16108208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 6071064 - 6071147
Alignment:
Q  238 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggg--gagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||| | || ||||| ||||| |||||||||||||||||||| ||||||||  || |||| || ||||||||||||||||    
T  6071064 aagagcttccgtttaaggggtgagcatgatgaattgatggactcacatttgaggggaagattgtt-gtgtgcaagtgtgagttat 6071147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 6e-71; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 37533404 - 37533253
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgac 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  37533404 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcgtgacccaacagtggtatcagagccccggttcgacgaagggtgcgac 37533305  T
Q  105 cgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaa 156  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  37533304 cgaggccgccggtcagttgcgtagaaagcagcaacgacggtacaagcagcaa 37533253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 37533055 - 37532897
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  37533055 tctcttgcttgtgcgcttgttctaacctcgatgtggacggtcccccgcgctcccatcgtgacccaacagtggtatcagagccccggttcgacgaagggtg 37532956  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtg 159  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  37532955 cgaccgaggccgccggtcagttgcgcagaaagcagcaacgactgtacaagcagcaagtg 37532897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 172 - 319
Target Start/End: Original strand, 7553891 - 7554040
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaatt 271  Q
    |||| ||| ||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7553891 gcaatggcggtgcaagcagtgttggtccgtttgcagagaaaccagcaacggcgacacatgcaaagtaagagcttccgcttgagggggagcacgatgaatt 7553990  T
Q  272 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||    
T  7553991 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttat 7554040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 22567083 - 22566905
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcat-gatccaacagtggtatcagagcccc-ggttcgacgaaggg 98  Q
    ||||||||||||| ||||||||  ||||||||||||| ||||||||| ||||||||||  || |||| ||||||||||||||||| ||| ||||||||||    
T  22567083 tctcttgcttgtggggttgttcgggcctcgatgtggatggtcccccgagctcccctcaacgacccaatagtggtatcagagcccccggtccgacgaaggg 22566984  T
Q  99 tgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacg 177  Q
    | ||||| ||||| ||||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||| | ||||||    
T  22566983 tacgaccaaggccaccggttagttgtgcagaaaacagcaaagacggtacaagaagcaagtggctccttgtgcagcaacg 22566905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1085660 - 1085544
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||| |||||||     
T  1085660 tctcttacttgtgtggttgttctagcctcgatgtggacggtccccctggctcccctcatgacccaacagtggtatcatagccccggttcgatgaagggta 1085561  T
Q  101 cgaccgaggccgccggt 117  Q
     ||||||||| ||||||    
T  1085560 tgaccgaggcagccggt 1085544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 14681431 - 14681525
Alignment:
Q  227 acatgcaaagtaagagcttctgcttga--gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||||||||||||| ||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14681431 acatgcaaagtaagagcttccgcttgaaggggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtaagttat 14681525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 47129223 - 47129360
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgcc 114  Q
    ||||||||||||||| |||| |||||||||| | |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| |||||| |||    
T  47129223 ggttgttctagcctcaatgtagacggtcccc-gagctcccctcatgatccaacagtggtatcagagcccc-gttcgatgaatggtgcgatcgaggcagcc 47129320  T
Q  115 ggttag-ttgcgcagaaagcagcaacgacggtacaagcag 153  Q
    |||  | ||||| |||||||| ||||| |||| |||||||    
T  47129321 ggtccgtttgcgtagaaagcaacaacggcggtgcaagcag 47129360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 8128484 - 8128336
Alignment:
Q  2 ctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||| |||| || |||||||||||| |||||||| || ||||||||| ||||||||| | | ||||||||||||||| ||||| |||||||||||||||     
T  8128484 ctctcgcttatgtggttgttctagcatcgatgtgaacagtcccccgcactcccctcactaacccaacagtggtatcaaagccctggttcgacgaagggta 8128385  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaa 149  Q
    ||| ||| || |||| |  |||||| ||||| ||||||||||| |||||    
T  8128384 cgatcgaagcagccgttccgttgcggagaaaccagcaacgacgatacaa 8128336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 185 - 300
Target Start/End: Complemental strand, 48243356 - 48243241
Alignment:
Q  185 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcaca 283  Q
    ||||||||||||| |||| | ||||||||||||||||| || ||| |||| |||||| ||||  ||||| ||||||||| |||||||||||||| |||||    
T  48243356 aagcagtgtcggttcgttggcggagaaaccagcaacggcgatacaagcaa-gtaagaacttccacttgaagggggagcatgatgaattgatggattcaca 48243258  T
Q  284 cttgagggggagtgttg 300  Q
    |||||||||||||||||    
T  48243257 cttgagggggagtgttg 48243241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 14681323 - 14681415
Alignment:
Q  73 tatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcctt 166  Q
    |||||||||||||||| || |||||||||||||||||| ||||||| |||||||||||||| |||||  |||||||| |||||| |||||||||    
T  14681323 tatcagagccccggttggatgaagggtgcgaccgaggcagccggtt-gttgcgcagaaagccgcaacagcggtacaaacagcaaatggctcctt 14681415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 30245276 - 30245421
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgac-gaagggtgcgaccg 106  Q
    |||||| |||||||| |||||| ||||||||||||||||  |||||||| |||| |||||||||||||||||||||| | |||||  |||||| ||| ||    
T  30245276 cttgtgtggttgttcaagcctcaatgtggacggtcccccatgctccccttatgacccaacagtggtatcagagcccc-gctcgacaaaagggtacgatcg 30245374  T
Q  107 aggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagca 152  Q
    |||| |||| |  | ||||||||| |||||||||| || ||||||||    
T  30245375 aggcagccgatccgtttgcgcagagagcagcaacggcgatacaagca 30245421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37167895 - 37167949
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37167895 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcctccgcgctcccc 37167949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 319
Target Start/End: Original strand, 37345819 - 37345931
Alignment:
Q  206 ggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggttt 304  Q
    ||||||| ||||||||| || ||| |||| |||| ||||||  ||||| |||||||||||||||||||||| |||||||||||| |||||||||| || |    
T  37345819 ggagaaagcagcaacggcgatacaagcaa-gtaaaagcttccacttgacgggggagcacgatgaattgatgaactcacacttgaaggggagtgtt-gtgt 37345916  T
Q  305 gcaagtgtgagttat 319  Q
    |||||||||||||||    
T  37345917 gcaagtgtgagttat 37345931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37532795 - 37532729
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaac 67  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  37532795 tctctagcttgtgctgttgttctagcctcgatgtggacggtcctccgcgctcccctcgtgatccaac 37532729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 30253691 - 30253768
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccg 85  Q
    |||||| |||||||| ||||||||||||||| |||||||  ||||||||||||| |||||| ||||||||||||||||    
T  30253691 cttgtgtggttgttcaagcctcgatgtggactgtcccccaggctcccctcatgacccaacaatggtatcagagccccg 30253768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 40094818 - 40094664
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcg-------ctcccctcatgatccaacagtggtatcagagccccggttcgacg 93  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||| |       | |||| |  || | ||||||||||||||||||| | |||||||    
T  40094818 tctcttgcttgtgaggttgttctagcctcgatgtggtcggtcccccgagtccccccccccccccccgacctaacagtggtatcagagccctg-ttcgacg 40094720  T
Q  94 aagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtaca 148  Q
    |||||| |||||||||| ||||||  | |||||||||||| ||||||| |||||||    
T  40094719 aagggtacgaccgaggcagccggtccgtttgcgcagaaagtagcaacggcggtaca 40094664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 45433355 - 45433502
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||  ||||||||| |||| ||  ||   ||||||||| ||||||||||| ||||||    
T  45433355 tctcttgcttgtggggttgttctagcctcgatgtggtcggtccccctggctcccctctatgaccctgca---gtatcagag-cccggttcgacaaagggt 45433450  T
Q  100 gcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 150  Q
     |||||||||| || |||  | ||||||| |||||||||||| |||| ||||    
T  45433451 acgaccgaggcagctggtccgtttgcgcataaagcagcaacggcggttcaag 45433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 45754829 - 45754976
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| |||||||| ||||||||||| | ||||| | || |||||||  |||| |||||||||||||||||||||| ||||| ||||||||     
T  45754829 tctcttgcttgtgtggttgttcaagcctcgatgtag-cggtcactcgagctcccccaatgacccaacagtggtatcagagcccc-gttcggcgaagggta 45754926  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
     ||||||||| ||| ||  | |||  ||||||||||||| ||||||||||    
T  45754927 tgaccgaggcagccagtccgtttgtacagaaagcagcaaagacggtacaa 45754976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 47129483 - 47129550
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 69  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  47129483 tctcttgcttgtgcggttgatctagcctcgatgtggacggt-ccccgagctcccctcatgacccaacag 47129550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 28300612 - 28300470
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||      ||     |||| |||||| ||||||||||| || | |||||||||||||     
T  28300612 tctcttgcttgtgtggttattctagcctcgatgtggacgatccc-----ttc----aatgaaccaacactggtatcagag-cctgattcgacgaagggta 28300523  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcag 153  Q
    |||||||||| | ||||   |||||||||||||||||||||||||||||||||    
T  28300522 cgaccgaggcagtcggtccattgcgcagaaagcagcaacgacggtacaagcag 28300470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30032681 - 30032735
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  30032681 tctcttgcttgtgcggttgttctatcctcgatgtggacggtcccccgagctcccc 30032735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 30244473 - 30244550
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccg 85  Q
    |||||| |||||||| ||||||||||||||||||||| |  ||||||||||||| |||||| |||||||| |||||||    
T  30244473 cttgtgtggttgttcaagcctcgatgtggacggtccctcaggctcccctcatgacccaacaatggtatcaaagccccg 30244550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 40094621 - 40094537
Alignment:
Q  234 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||| ||||||||| ||||  ||||||| ||||||||||||||| ||| |||||||| || ||||||||||||||||    
T  40094621 aagtaagagcttccgcttgagggagagcgtgatgaatagatggactcacactttaggaggagtgtt-gtgtgcaagtgtgagttat 40094537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 269
Target Start/End: Original strand, 47129343 - 47129439
Alignment:
Q  173 caacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaa 269  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||   | ||| || ||||||||||||| ||||| |||||||||| ||||||    
T  47129343 caacggcggtgcaagcagtgtcggtccgtttgcggagaaaccagcaacgacaatacaagc-aagtaagagcttccgcttgaagggggagcatgatgaa 47129439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 37533201 - 37533153
Alignment:
Q  271 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37533201 tgatggactcacgcttgagggggagtgttggtttgcaagtgtgagttat 37533153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 317
Target Start/End: Complemental strand, 1085526 - 1085394
Alignment:
Q  189 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaattgatgg--actcacact 285  Q
    |||||||||||||||| ||||||||||||||| | || ||| || |||||||||||||  |||| ||||| |||| ||||||  |||||  |||||||||    
T  1085526 agtgtcggtccgtttgcggagaaaccagcaacagcgatacaagc-aagtaagagcttccccttgaaggggtagcatgatgaaaagatggacactcacact 1085428  T
Q  286 tgagggggagtgttg--gtttgcaagtgtgagtt 317  Q
    ||| |||||||||||  || ||||||||||||||    
T  1085427 tgaaggggagtgttgttgtgtgcaagtgtgagtt 1085394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11845305 - 11845359
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  11845305 tctcttgcttgtgcagttgttctagcctcgatgtagacggtcccccgtgctcccc 11845359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23421 - 23368
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctccc 54  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  23421 tctcttgcatgtgcggttgttctagcctcgatttggacggtcccccgagctccc 23368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 319
Target Start/End: Original strand, 30244628 - 30244716
Alignment:
Q  234 aagtaagagcttctgcttgagggggagcacgatgaatt-gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||| |||| | |||||||| ||||||   |||||||||||||||||||||||||||||  || ||||||||||||||||    
T  30244628 aagtaagagcttccgcttcaaggggagcatgatgaaaaagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttat 30244716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 37345746 - 37345846
Alignment:
Q  52 cccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagc 151  Q
    |||||| ||| |||||||||||||||||||||||||||   ||||||| | | |||||| |||| |  |||||| |||||||||||||| || |||||||    
T  37345746 cccctcttgacccaacagtggtatcagagccccggttcagtgaagggtacaatcgaggcagccgatccgttgcggagaaagcagcaacggcgatacaagc 37345845  T
Q  152 a 152  Q
    |    
T  37345846 a 37345846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 45697752 - 45697800
Alignment:
Q  120 gttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  45697752 gttgcgcagaaagcagcaacggcggtacaagaagcaagtggctccttgt 45697800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 30245385 - 30245509
Alignment:
Q  197 tccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatg-aattgatggactcacacttgagggggag 295  Q
    |||||||| | ||| | ||||||||| || ||| |||| ||||||||||| ||||||||||||||| |||| ||  || |||| |||||||||||||||     
T  30245385 tccgtttgcgcagagagcagcaacggcgatacaagcaa-gtaagagcttccgcttgagggggagcatgatgaaaaagacggacacacacttgagggggac 30245483  T
Q  296 tgttg--gtttgcaagtgtgagttat 319  Q
    |||||  || ||||||||||||||||    
T  30245484 tgttgttgtgtgcaagtgtgagttat 30245509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 45697841 - 45697907
Alignment:
Q  234 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    ||||||||||||| |||||| |||||||| ||||||| |||  |||||||||||||| |||||||||    
T  45697841 aagtaagagcttccgcttgaaggggagcatgatgaatagataaactcacacttgaggaggagtgttg 45697907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 30245194 - 30245255
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 69  Q
    |||||| |||||||| |||||||||||||| ||||||||| ||||||||| ||| |||||||    
T  30245194 cttgtgtggttgttcaagcctcgatgtggatggtcccccgagctcccctcgtgacccaacag 30245255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 45434514 - 45434625
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaaga--gcttctgcttga-gggggagcacgatgaattgatggactc 280  Q
    |||| |||||||||| ||||| |||||||| |||||||| || ||| |||| |||| |  ||||| |||||| ||||||||| |||||||||| ||||||    
T  45434514 caagtagtgtcggtctgtttgcggagaaactagcaacggcgatacaagcaa-gtaaaaaagcttccgcttgaagggggagcatgatgaattgaaggactc 45434612  T
Q  281 acacttgaggggg 293  Q
    ||||||| |||||    
T  45434613 acacttggggggg 45434625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 317
Target Start/End: Original strand, 10342192 - 10342271
Alignment:
Q  238 aagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagtt 317  Q
    |||||||||  |||||||||| |||| |||||||||  ||||||| ||||||||||||||| |||| ||||||||||||||    
T  10342192 aagagcttccacttgagggggcagcatgatgaattggcggactcatacttgagggggagtg-tggtgtgcaagtgtgagtt 10342271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34218078 - 34218011
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||| ||||||  |||||||| |||||||||||||||||||| ||| ||||||| ||| ||||||||    
T  34218078 tctctcgcttgtatggttgttcaagcctcgatgtggacggtcctccgagctccccccataatccaaca 34218011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 48243419 - 48243356
Alignment:
Q  87 ttcgacgaagggtgcgaccgaggccgccggttagtt-gcgcagaaagcagcaacgacggtacaa 149  Q
    ||||||||||||| |||||||||| ||||||  ||| |||||||||||||||||| ||||||||    
T  48243419 ttcgacgaagggtacgaccgaggcagccggtccgtttgcgcagaaagcagcaacggcggtacaa 48243356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 30253609 - 30253667
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaa 66  Q
    |||||| |||||||| |||||||||||||| ||||||||| ||||||||| ||| ||||    
T  30253609 cttgtgtggttgttcaagcctcgatgtggatggtcccccgagctcccctcgtgacccaa 30253667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24177549 - 24177594
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||    
T  24177549 tctcttgcttgtgcggttgtcttagcctcgacgtggacggtccccc 24177594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 30245024 - 30245092
Alignment:
Q  253 agggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||||||||| ||||| | ||||||||| |||||||||||||||||||  || | ||||||||||||||    
T  30245024 agggggagcatgatgattagatggactcgcacttgagggggagtgttgttgtgtacaagtgtgagttat 30245092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 118343 - 118299
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||    
T  118343 tctcttgcttgtgtggttgttctagctttgatgtggacggtcccc 118299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 5825621 - 5825562
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||| ||||||||| ||||||    
T  5825621 cttgtgcggttgttctagccttgatgtggacggtctcccaagct-ccctcatgacccaaca 5825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 30244391 - 30244439
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccct 56  Q
    |||||| |||||||| |||||||||||||| ||||||||| ||||||||    
T  30244391 cttgtgtggttgttcaagcctcgatgtggatggtcccccgagctcccct 30244439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36939777 - 36939741
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtgga 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36939777 tctcttgcttatgcggttgttctagcctcgatgtgga 36939741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 41854750 - 41854793
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    |||| |||||||||||||||||||||| |||| |||||||||||    
T  41854750 tcttacttgtgcggttgttctagcctcaatgtagacggtccccc 41854793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9901757 - 9901799
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 43  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||    
T  9901757 tctcttgctagtgcggttgttctagcctcggtgtggactgtcc 9901799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 30244220 - 30244285
Alignment:
Q  256 gggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||| ||||| | |||| ||||||||||||||||||||||||  || | ||||||||||||||    
T  30244220 gggagcatgatgactagatgaactcacacttgagggggagtgttgttgtgtacaagtgtgagttat 30244285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 6054688 - 6054725
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctc 52  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  6054688 ggttgttctagccttgatgtggacggtcccccgagctc 6054725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 22566872 - 22566808
Alignment:
Q  254 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagt 316  Q
    ||||||||||||| || |||| |||| ||| ||||||||||||||||  || |||||||||||||    
T  22566872 gggggagcacgataaagtgatagactaacatttgagggggagtgttgttgtatgcaagtgtgagt 22566808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 297
Target Start/End: Complemental strand, 28300476 - 28300365
Alignment:
Q  184 caagcagtgtcggtccgtttg-tggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga--gggggagcacgatgaattgatggactc 280  Q
    |||||||||||||||| |||| |||||||||||||||||  |  ||| |||| |     ||||| ||||||  || |||||| ||||||| |||||||||    
T  28300476 caagcagtgtcggtccatttgctggagaaaccagcaacgacgttacaagcaagg-----gcttccgcttgaaaggaggagcatgatgaatagatggactc 28300382  T
Q  281 acacttgagggggagtg 297  Q
    ||||||||| |||||||    
T  28300381 acacttgagagggagtg 28300365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45434750 - 45434803
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctccc 54  Q
    |||||| ||||||  ||||||||||||||||||||  ||||||||| |||||||    
T  45434750 tctcttacttgtggagttgttctagcctcgatgtgatcggtccccctcgctccc 45434803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 3e-54; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 22303999 - 22303820
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcg-ctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||| | |||||||||||||||||||||||  |||||||  | ||||||   ||| | |||||||||||||||||||||||||||||||||||    
T  22303999 tctcttgcttgagtggttgttctagcctcgatgtggattgtcccccaaggctcccccagtgacctaacagtggtatcagagccccggttcgacgaagggt 22303900  T
Q  100 gcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacggc 179  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  22303899 gcgacagaggccgccggtcagttgcgcagaaagcagcaacgacggtacaagcagcaagtggcttcttgtgcagcaacggc 22303820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 22304307 - 22304476
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgct-cccctca-tgatccaacagtggtatcagagccccggttcgacgaaggg 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22304307 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccctagcttcccctcactgacccaacagtggtatcagagccccggttcgacgaaggg 22304406  T
Q  99 tgcgaccgaggccgccggttagttgcgcagaaagc-agcaacgacggtacaagcagcaagtggctccttgt 168  Q
    | |||||||||| ||||| | |||||||||||||| ||||||  | ||||||| || ||||||||||||||    
T  22304407 tacgaccgaggcagccgg-tcgttgcgcagaaagcaagcaacagctgtacaagtagtaagtggctccttgt 22304476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 15772968 - 15773119
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||||      |||||||||||| ||||||||||||||||||||| | |||||||||||||     
T  15772968 tctcttgcttgtgtggttgttctaacctcgatgtggacggtccttttgactcccctcatgacccaacagtggtatcagagccctgattcgacgaagggta 15773067  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagca 152  Q
    ||| ||||||||||||| ||||  |||||||||||||||  || ||||||||    
T  15773068 cgatcgaggccgccggtcagttatgcagaaagcagcaacagcgatacaagca 15773119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 53577478 - 53577616
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||  ||| |||||||||||||||| |||||| |||||||||  |||| ||   ||| |||||||||||||||||| ||||||||||||||||||    
T  53577478 tctcttgcaagtgtggttgttctagcctcggtgtggatggtcccccgaactcctctttgtgacccaacagtggtatcagagtcccggttcgacgaagggt 53577577  T
Q  100 gcgaccgaggccgccggttagttgcgcagaaagcagcaa 138  Q
     ||||||||||||||||| ||||||||||||||||||||    
T  53577578 acgaccgaggccgccggtcagttgcgcagaaagcagcaa 53577616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 41360164 - 41360014
Alignment:
Q  18 tgttctagcctcgatgtggacggtcccccgcgctcccctcatgatcc-aacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccgg 116  Q
    |||||||||||||||||||||||| ||||| |||||||||    ||| ||||||||||||||||| |||||||||||||| || ||||||  || |||||    
T  41360164 tgttctagcctcgatgtggacggttccccgggctcccctcgctgtcctaacagtggtatcagagcgccggttcgacgaagagtacgaccg--gcagccgg 41360067  T
Q  117 ttagttgcgcagaaagcagcaacgacggtacaagc--agcaagtggctccttgt 168  Q
    |  |||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  41360066 tc-gttgtgcagaaagcagcaacgacggtacaagcagagcaagtggctccttgt 41360014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 9239941 - 9240067
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgcc 114  Q
    |||| |||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| || |||||| || |||||| ||| |||||| | |    
T  9239941 ggtttttctagcctcgatgtggacggtcccccaagctcccctcatgatccaacagtagtatcagaacctcggttcaacaaagggtacgatcgaggcagtc 9240040  T
Q  115 ggttagttgcgcagaaagcagcaacga 141  Q
     ||  ||||||||||||||||||||||    
T  9240041 agtccgttgcgcagaaagcagcaacga 9240067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 22304495 - 22304580
Alignment:
Q  231 gcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgag 315  Q
    |||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22304495 gcaaagtaagagcttccgcttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgag 22304580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 29644946 - 29644811
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccc---cggttcgacgaagg 97  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||| ||| ||| |  |||||||| |||||   ||||||||||||||    
T  29644946 tctcttgcttatgcggttgttttagcctcgatgtggacggtcccccaagctcccctcgtgacccagctttggtatcaaagccccgtcggttcgacgaagg 29644847  T
Q  98 gtgcgaccgaggccgccggttagttgcgcagaaagc 133  Q
    || ||||||||||||||| | | |||||||||||||    
T  29644846 gtacgaccgaggccgccgttcaattgcgcagaaagc 29644811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 37990908 - 37990782
Alignment:
Q  194 cggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgaggggg 293  Q
    |||| |||||| | ||||||||||||||| || ||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||| |||||||||    
T  37990908 cggttcgtttgcgcagaaaccagcaacggcgatacatgcaaagtaaaagcttccgcttgaggggg-gcatgatgaattgatggactcacagttgaggggg 37990810  T
Q  294 agtgttg--gtttgcaagtgtgagttat 319  Q
    |||||||  || | ||||||||||||||    
T  37990809 agtgttgttgtgtacaagtgtgagttat 37990782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 33803289 - 33803143
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccg 106  Q
    |||||| ||||||||||||||||||||||||||||||||   ||||| || |||| |||||||||||||||||||| || ||||||||||||| |||| |    
T  33803289 cttgtgtggttgttctagcctcgatgtggacggtcccccaaactcccatcaatga-ccaacagtggtatcagagcctcgattcgacgaagggtacgactg 33803191  T
Q  107 aggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 153  Q
    |||| ||| ||  | ||||||| |||||||||||||| ||||||||||    
T  33803190 aggcagccagtccgtttgcgcataaagcagcaacgacagtacaagcag 33803143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 3135494 - 3135350
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgac 104  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||| |||||||| ||||| ||||||||||||||||  |||||| |||||| |||     
T  3135494 ttgcttgtgcggttgttctagcctcgatgtggacggtccccctgactctcctcatgacccaactgtggtatcagagcccc-attcgacaaagggtacgaa 3135396  T
Q  105 cgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
    |||||| |  |||  | || ||||||||||||||||| ||||||||    
T  3135395 cgaggcagttggtccgtttacgcagaaagcagcaacggcggtacaa 3135350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 37991021 - 37990881
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgct-cccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    |||||||||| || |||||||||||||||||||||||||||||| |  ||| |||||||||| |||||||||||||||| |||||  |||||| ||||||    
T  37991021 tctcttgcttatgtggttgttctagcctcgatgtggacggtccctcaggctccccctcatgacccaacagtggtatcagggcccc-attcgacaaagggt 37990923  T
Q  100 gcgaccgaggccgccggttag-ttgcgcagaaagcagcaacg 140  Q
     ||| |||||| ||||||| | ||||||||||| ||||||||    
T  37990922 acgatcgaggcagccggttcgtttgcgcagaaaccagcaacg 37990881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 32462944 - 32462795
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||  |||||||| | || || |||||||| ||||||| ||  ||||||||||||||    
T  32462944 tctcttgcttgtgcggttgttctagcctcgatgtgtacggtcttccaagctccccttagtgttctaacagtggcatcagag-cctagttcgacgaagggt 32462846  T
Q  100 gcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
     ||||||  || | ||||| | |||||||||||||||||||| ||||||||    
T  32462845 acgaccggagcagtcggttcgtttgcgcagaaagcagcaacggcggtacaa 32462795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 22304208 - 22304261
Alignment:
Q  266 tgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22304208 tgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 22304261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 54018242 - 54018093
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||   ||||     ||| | |||||||| |||||||| ||||||| ||||||||||    
T  54018242 tctcatgcttgtgtggttgttctagcctcgatgtgggcggtccccctgactcctacggtgaccaaacagtggcatcagagctccggttcaacgaagggtg 54018143  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
    ||| |||||| ||||||  | |||||||||||||||||| | ||||||||    
T  54018142 cgatcgaggcagccggtccgtttgcgcagaaagcagcaatggcggtacaa 54018093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 54018090 - 54017959
Alignment:
Q  190 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgag 289  Q
    ||||| ||||||||| |||||||||| |||| | || ||| ||||   ||||||||| |||||||||||| || ||||||  ||||||||||||||||||    
T  54018090 gtgtcagtccgtttgcggagaaaccaacaacagtgatacaagcaagtaaagagcttccgcttgagggggaacatgatgaaaagatggactcacacttgag 54017991  T
Q  290 ggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||| |||  || ||||||||||||||||    
T  54017990 ggggagtattgttgtgtgcaagtgtgagttat 54017959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32589817 - 32589884
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  32589817 tctcttgcttgtgtggttgttctaggctcgatgtggacggtccccctcgctcccttcatgatccaaca 32589884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 8328259 - 8328368
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 282  Q
    |||||||||||| || ||||| |||||||||| |||||| || ||| |||| ||||||||||| |||||| |||||||  ||||| ||||||||||||||    
T  8328259 caagcagtgtcgatcagtttgcggagaaaccaacaacggtgatacaagcaa-gtaagagcttccgcttgaagggggagatcgatgcattgatggactcac 8328357  T
Q  283 acttgaggggg 293  Q
    |||||||||||    
T  8328358 acttgaggggg 8328368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 32462790 - 32462702
Alignment:
Q  234 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||||||||  || | ||||||||||||||    
T  32462790 aagtaagagctttcgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttat 32462702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 43346835 - 43346754
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg-cgctcccctcatgatccaacagtggtatcagagc 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||  | |||||||||||||||||    
T  43346835 tctcttgcttgtgcggttgttctagcctctatgtggacggtcctccgaagctcccctcatgtcctaacagtggtatcagagc 43346754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 4823606 - 4823670
Alignment:
Q  255 ggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||| | || |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4823606 ggggagcacgttaaagtgatggactcacacttgaaggggagtgttggtttgcaagtgtgagttat 4823670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25755508 - 25755568
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatga 61  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  25755508 tctcttgcttgtgcggttgttctagcctcgatgtggatggtcccccgaactcccctcatga 25755568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 319
Target Start/End: Complemental strand, 21832614 - 21832486
Alignment:
Q  188 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttg 287  Q
    ||||||||||||||| | ||||||||||||||||  || ||| |||| ||| |||||||   |||| |||||||| ||||||| ||||||||||||||||    
T  21832614 cagtgtcggtccgtt-gcggagaaaccagcaacgacgatacaagcaa-gtatgagcttccatttgatggggagcatgatgaatagatggactcacacttg 21832517  T
Q  288 agggggagtgttggtttgcaagtgtgagttat 319  Q
    ||| ||||||||  | ||||||||||||||||    
T  21832516 aggcggagtgtt-atgtgcaagtgtgagttat 21832486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 52634789 - 52634886
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    |||||||||||||| ||||||||||||| ||||| ||| |||||||| |||||||   ||| ||||||||| ||||||||||||  |||||||||||||    
T  52634789 tctcttgcttgtgcagttgttctagccttgatgtagactgtcccccgagctcccccagtgacccaacagtgatatcagagcccc-cttcgacgaagggt 52634886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 53577627 - 53577721
Alignment:
Q  31 atgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgc 124  Q
    |||||||||||||||||  |||| ||   ||| |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||    
T  53577627 atgtggacggtcccccgaactcctctttgtgacccaacagtggtatcagagtcccggttcgaagaagggtacgaccgaggccgccggtcagttgc 53577721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 15773140 - 15773207
Alignment:
Q  254 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  15773140 gggggagcacgataaagtgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttat 15773207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42342432 - 42342360
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtgg 72  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| | ||| ||||||||||    
T  42342432 tctcttgcttgtgcggttgttctagcctcaatgtggacggtccccctggctccccttagtgacccaacagtgg 42342360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 41359809 - 41359660
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggt-cccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||| ||||||| |||||||||||||||||||||| |||| |||||| |||||||   ||| |||| |||||||||| ||||||  |||||||||||||    
T  41359809 tctctcgcttgtgtggttgttctagcctcgatgtgggcggtccccccgagctcccccagtgacccaatagtggtatcatagcccc-attcgacgaagggt 41359711  T
Q  100 gcgaccgaggccgccggttagt-tgcgcagaaagcagcaacgacggtacaa 149  Q
      || |||||| ||| ||  || |||||| |||||||||||  ||||||||    
T  41359710 aagatcgaggcagccagtccgtctgcgcataaagcagcaacagcggtacaa 41359660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42342134 - 42342092
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42342134 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 42342092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 8328154 - 8328222
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga 253  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||| || ||||||||||||| ||||||    
T  8328154 caagcagtgtcggtccgtttgcggagaaaccagcaacggcgatacaagc-aagtaagagcttccgcttga 8328222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37990683 - 37990626
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||| |||| |||||    
T  37990683 tctcttgcttgtgtgattgttctagcctcgatgtggacggtcccccgagctctcctca 37990626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 299
Target Start/End: Complemental strand, 3135364 - 3135237
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagag-cttctgcttgagggggagcacgatgaat 270  Q
    |||||||| || ||| ||||||||||| ||||| ||||||||||||||||  || |||  |||   ||| | |||| ||| |||||||||||||||||||    
T  3135364 gcaacggcggtacaaacagtgtcggtctgtttgcggagaaaccagcaacgacgatacaaacaagtaaagtggcttccgctagagggggagcacgatgaat 3135265  T
Q  271 tgatggactcacacttgagggggagtgtt 299  Q
    |||| ||||||||||||| || |||||||    
T  3135264 tgat-gactcacacttgatggtgagtgtt 3135237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 54017860 - 54017780
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagc 81  Q
    |||||| |||||| |||||||||||| ||||||||| |||||||||  |||||||   ||| |||||||||||||||||||    
T  54017860 tctcttacttgtgtggttgttctagcttcgatgtgggcggtccccctggctcccccagtgacccaacagtggtatcagagc 54017780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 42342296 - 42342238
Alignment:
Q  258 gagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtga 314  Q
    ||||| |||||||||||||||||||||||||||||||||||||  || |||||||||||    
T  42342296 gagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtgcaagtgtga 42342238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 319
Target Start/End: Original strand, 9240079 - 9240164
Alignment:
Q  234 aagtaagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||| ||| |||||||||| |||||  | |||| ||||||||||||||||||| |||||||| || ||||||||||||||||    
T  9240079 aagtaagagtttccgcttgaggggagagcataacgaatggatggactcacacttgaggaggagtgtt-gtgtgcaagtgtgagttat 9240164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8328384 - 8328441
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| ||  |||||||||    
T  8328384 tctcttgcttgtggggttgttttagcctcgatgtggacggtcccacgaactcccctca 8328441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22304683 - 22304728
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||    
T  22304683 tctcttgcttgtgcggttgttctagtctcgatgtggacagtccccc 22304728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25739469 - 25739424
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  25739469 tctctagcttgtgcggtagttctagcctcgatgtggacggtccccc 25739424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35946636 - 35946681
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||    
T  35946636 tctcttgcttgtgcaattgttctagcctcgatgtggacggtccccc 35946681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 41359531 - 41359490
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  41359531 ttgcttgtgcggttgttctagcctcaatgtggacggtccccc 41359490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 11661858 - 11661965
Alignment:
Q  214 cagcaacggagacacatgcaaagtaaga-gcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagt 310  Q
    ||||||||| || ||||||||||||| | ||||| |||  ||| |||||||||| || ||||||||||||||||  ||||||||||||  || || ||||    
T  11661858 cagcaacggcgatacatgcaaagtaaaaagcttccgctctaggaggagcacgataaagtgatggactcacacttttgggggagtgttgttgtatgtaagt 11661957  T
Q  311 gtgagtta 318  Q
    ||||||||    
T  11661958 gtgagtta 11661965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 15773311 - 15773375
Alignment:
Q  4 cttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    |||||||||| |||||||||| |||||||||||||| ||| ||   |||||||||||||||||||    
T  15773311 cttgcttgtgtggttgttctaacctcgatgtggacgatcctcctaactcccctcatgatccaaca 15773375  T

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Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 1634345 - 1634302
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  1634345 ggttgttctagcctcgatgtggacggtccccctagctcccctca 1634302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 8328032 - 8328115
Alignment:
Q  11 gtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagg 97  Q
    |||| |||||||||||||||||||||||| ||||| | |||  |||  ||||||||| |||||||||||| ||||||||||| ||||    
T  8328032 gtgcagttgttctagcctcgatgtggacgctcccctgagct--cctagtgatccaactgtggtatcagag-cccggttcgacaaagg 8328115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 3135098 - 3135033
Alignment:
Q  49 gctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccg 115  Q
    ||||||||||||| |||| |||||||||||||| || ||||||| |||||| |||||||||| ||||    
T  3135098 gctcccctcatgacccaatagtggtatcagagcacc-gttcgacaaagggtacgaccgaggcagccg 3135033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 52634889 - 52634931
Alignment:
Q  258 gagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    ||||||||||||||||| |||||||||||||||| ||||||||    
T  52634889 gagcacgatgaattgattgactcacacttgagggagagtgttg 52634931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12114606 - 12114561
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||    
T  12114606 tctcttacttgtgcggttgttctagccacgatgtggtcggtccccc 12114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21832389 - 21832344
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||    
T  21832389 tctcttgcttgtctggttgttctagcctcgatgtggacagtccccc 21832344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 4823507 - 4823563
Alignment:
Q  113 ccggttagttgcgcagaaagca-gcaacgacggtacaagcagcaagtggctccttgt 168  Q
    ||||| |||||||||||||||| ||||||  |||||||||| |||||||||||||||    
T  4823507 ccggtcagttgcgcagaaagcaagcaacggtggtacaagcaacaagtggctccttgt 4823563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39934999 - 39934963
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtgga 37  Q
    ||||||||||||| |||||||||||||||||||||||    
T  39934999 tctcttgcttgtgtggttgttctagcctcgatgtgga 39934963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 47
Target Start/End: Original strand, 37726625 - 37726656
Alignment:
Q  16 gttgttctagcctcgatgtggacggtcccccg 47  Q
    ||||||||||||||||||||||||||||||||    
T  37726625 gttgttctagcctcgatgtggacggtcccccg 37726656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 41360008 - 41359904
Alignment:
Q  218 aacggagacacatgcaaagtaa-gagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtg 313  Q
    ||||| || ||| ||||||||| |||||||  ||||| ||| ||||| ||||||| |||| |||||||||| |||||||||||||  || ||||||||||    
T  41360008 aacggcgatacaggcaaagtaaagagcttccacttgaagggagagcatgatgaatagatg-actcacacttaagggggagtgttgttgtgtgcaagtgtg 41359910  T
Q  314 agttat 319  Q
    ||||||    
T  41359909 agttat 41359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 44160580 - 44160546
Alignment:
Q  12 tgcggttgttctagcctcgatgtggacggtccccc 46  Q
    |||| ||||||||||||||||||||||||||||||    
T  44160580 tgcgattgttctagcctcgatgtggacggtccccc 44160546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22303703 - 22303662
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtc 42  Q
    |||||| |||||||| |||||||||||||||||| |||||||    
T  22303703 tctcttacttgtgcgattgttctagcctcgatgtagacggtc 22303662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 50329606 - 50329573
Alignment:
Q  50 ctcccctcatgatccaacagtggtatcagagccc 83  Q
    ||||||||||||||||||||| ||||||||||||    
T  50329606 ctcccctcatgatccaacagtagtatcagagccc 50329573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31190123 - 31190167
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    ||||||||||||  |||||||||||||||||| |||||| |||||    
T  31190123 tctcttgcttgtcgggttgttctagcctcgatttggacgctcccc 31190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 33803161 - 33803094
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaag 240  Q
    |||||| |||| ||||||||||||||||| ||| |||||| |||||||||| || ||| |||| |||||    
T  33803161 gcaacgacagtacaagcagtgtcggtccg-ttgcggagaagccagcaacggcgatacaagcaaggtaag 33803094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 77
Target Start/End: Original strand, 47157662 - 47157690
Alignment:
Q  49 gctcccctcatgatccaacagtggtatca 77  Q
    |||||||||||||||||||||||||||||    
T  47157662 gctcccctcatgatccaacagtggtatca 47157690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 172 - 319
Target Start/End: Original strand, 5643 - 5792
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaatt 271  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  5643 gcaacggcggtgcaagcagtgtcggtccgtttgcagagaaaccagtaacggcgacacatgcaaagtaagagcttccgcttgagggggagcaagatgaatt 5742  T
Q  272 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||    
T  5743 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttat 5792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 5511 - 5661
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||||| |||||||| ||||||||||||| ||| ||||   |||||| ||| ||| |||| |||||||||||||||   ||||||||||||||    
T  5511 tctcttgcttgtggggttgttcaagcctcgatgtgg-cggaccccaaagctccc-tcagtgacccaatagtggtatcagagcct--gttcgacgaagggt 5606  T
Q  100 gcgaccgaggccgccggttagtt-gcgcagaaagcagcaacgacggtacaagcag 153  Q
    | || | |||| | ||||  ||| |||||||||||||||||| |||| |||||||    
T  5607 gtgatccaggcagtcggtccgtttgcgcagaaagcagcaacggcggtgcaagcag 5661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 5e-53; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 44290868 - 44290720
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||| |||||||||||||||||||||||||||||||||||||    
T  44290868 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagctccccccactgacccaacagtggtatcagagccccggttcgacgaagggt 44290769  T
Q  100 gcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaa 149  Q
    ||||||||||| ||||||| |||||||||||||| ||||||  |||||||    
T  44290768 gcgaccgaggcagccggtt-gttgcgcagaaagccgcaacggtggtacaa 44290720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 50052053 - 50051902
Alignment:
Q  16 gttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccg 115  Q
    ||||||||| ||||||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  50052053 gttgttctaacctcgatgtggacagtcccccgagctcccctcgtgacccaacagtggtatcagagccccggttcgacaaagggcgcgaccgaggcagccg 50051954  T
Q  116 gttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    | | |||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  50051953 g-tggttgggcagaaagccgcaacgacagtacaagcagcaagtggctccttgt 50051902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 36 - 168
Target Start/End: Complemental strand, 48588870 - 48588739
Alignment:
Q  36 gacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcag 135  Q
    |||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||| | ||| ||||||||| |    
T  48588870 gacggtccccctagctcccctcatgatccaacaatgatatcagagccccggttcgacgaagggtgcgactgaggcagccggtca-ttgtgcagaaagctg 48588772  T
Q  136 caacgacggtacaagcagcaagtggctccttgt 168  Q
    |||||||||||||||||||||||||||||||||    
T  48588771 caacgacggtacaagcagcaagtggctccttgt 48588739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 48588532 - 48588364
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtc-ccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaaggg 98  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||   | |||||||| ||| |||| ||||||||||||| |||||||| ||||||||    
T  48588532 tctcttacttgtgcggttgttctagcctcgatgtggacggtcgcccaaagttcccctcactgaaccaaaagtggtatcagagtcccggttcaacgaaggg 48588433  T
Q  99 tgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    ||| |||||||| ||||||| |||||||||||||| ||||||||| ||||| || |||||||||||||||    
T  48588432 tgcaaccgaggcagccggtt-gttgcgcagaaagccgcaacgacgatacaaacaacaagtggctccttgt 48588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 11977058 - 11977224
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaaca--gtggtatcagagccccggttcgacgaagg 97  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||||| ||||| ||   ||| | ||||  |||| |||||||||| |||| ||||||||    
T  11977058 tctcttgcaagtgcggtagttctagcctcgatgtggacggtcccccgagctcctctttgtgacctaacaaagtggcatcagagccc-ggtttgacgaagg 11977156  T
Q  98 gtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcct 165  Q
    || |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11977157 gtacgaccgaggccgtcggtcagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcct 11977224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 26661942 - 26661766
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| |||||||| | ||| |||| ||| |||| |||  ||||||||| ||| |||| |||||||| ||| || || |||||||||||||     
T  26661942 tctcttgcttgtgtggttgttcaatccttgatgcggatggtctccctagctcccctcgtgacccaaaagtggtattagaacctcgattcgacgaagggta 26661843  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacg 177  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  26661842 cgaccgaggccgccagtcaattgcgcagaaagcagcaacgacggtacaagcaacaagtggctccttgtgcagcaacg 26661766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 34649552 - 34649705
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| | ||| ||||  ||| |||||||||||||||||||||| |||||| |||||||    
T  34649552 tctcttgctagtgtggttgttctagcctcgatgtggacggtcccccggagcttccctagtgacccaacagtggtatcagagcccc-gttcgatgaagggt 34649650  T
Q  100 gcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 153  Q
     |||||||||| ||||||  | |||||||||||||| ||||||||||||||||||    
T  34649651 acgaccgaggcagccggtccgtttgcgcagaaagcaacaacgacggtacaagcag 34649705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 66516 - 66366
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||| ||||||||||||||||||||||| |||||||||||   ||  ||||||||||||| ||||||||| |||||||| ||||||||||||||||||     
T  66516 tctctcgcttgtgcggttgttctagcctcaatgtggacggttatccaagctcccctcatgacccaacagtgatatcagagtcccggttcgacgaagggta 66417  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagc 151  Q
    |||||||||| ||||||  |||||| ||||| || ||||| ||||| ||||    
T  66416 cgaccgaggcagccggtccgttgcggagaaaccaacaacggcggtataagc 66366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 34364621 - 34364940
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||| |||| |||||||| ||||||||||||||||| ||| ||| | |||||||   ||| |||||||||||||||||||||||||||||||||||||     
T  34364621 tctctcgcttatgcggttgctctagcctcgatgtggatggttccctgagctcccccagtgacccaacagtggtatcagagccccggttcgacgaagggta 34364720  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcc-ttgtacggcaacggcagtgcaagcagtgtcggtc 198  Q
    ||||| || | ||||||  | ||| |||||||||||||||| || |||||| ||   || | ||| ||   |  ||||||   | ||||||   ||| ||    
T  34364721 cgacccagacagccggtccgtttgtgcagaaagcagcaacggcgatacaagtag--tgtcggtccgttaaccaacaacggtgatacaagca-catcgatc 34364817  T
Q  199 cgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatg-aattgatggactcacacttgagggggagtg 297  Q
    |||||| ||| ||||||||||| | |||||| || ||||||||||||| | ||||||||||||| |||| ||  ||||||||||||||||||||||||||    
T  34364818 cgtttgcggaaaaaccagcaacagcgacacaagc-aagtaagagcttccgattgagggggagcatgatgaaaaagatggactcacacttgagggggagtg 34364916  T
Q  298 ttg--gtttgcaagtgtgagttat 319  Q
    |||  || ||||||||||||||||    
T  34364917 ttgttgtgtgcaagtgtgagttat 34364940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 31767203 - 31767097
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcg 102  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||  ||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||    
T  31767203 tcttgcttgtgtggttgttctagactcgatgtggacggtcccccaagcttccctcatgacccaacagtggtatcagagcccc-gttcgacgaagggtacg 31767105  T
Q  103 accgaggc 110  Q
    ||||||||    
T  31767104 accgaggc 31767097  T

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Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 231 - 319
Target Start/End: Complemental strand, 50051883 - 50051794
Alignment:
Q  231 gcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  50051883 gcaaagtaagagcttctgcttgaagggggagcatgatgaattaatggactcacacttgagggggaatgttggtttgcaagtgtgagttat 50051794  T

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Target: chr1; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 22077528 - 22077392
Alignment:
Q  12 tgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggcc 111  Q
    ||||||||||| ||| ||||| |||||||||||||  ||||||||  ||| |||||||||| |||||||||| ||||||||||||||| ||||| ||||     
T  22077528 tgcggttgttcaagcatcgatatggacggtcccccaggctccccttgtgacccaacagtggcatcagagcccaggttcgacgaagggtacgaccaaggca 22077429  T
Q  112 gccggttagttgcgcagaaagcagcaacgacggtaca 148  Q
    ||||||  |||||| ||||| ||||||||||||||||    
T  22077428 gccggtccgttgcggagaaaccagcaacgacggtaca 22077392  T

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Target: chr1; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 3537372 - 3537290
Alignment:
Q  238 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3537372 aagagcttccgcttgaagggggagcaagatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 3537290  T

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Target: chr1; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 231 - 319
Target Start/End: Complemental strand, 44290690 - 44290601
Alignment:
Q  231 gcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44290690 gcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 44290601  T

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Target: chr1; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 227 - 317
Target Start/End: Complemental strand, 48588724 - 48588633
Alignment:
Q  227 acatgcaaagtaagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagtt 317  Q
    ||||||||| |||||||||| |||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48588724 acatgcaaaataagagcttccgcttgaaggggtagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagtt 48588633  T

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Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9956023 - 9956129
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||   |||| |||| ||| |||||||||||||||||||| ||||||||||||||||     
T  9956023 tctcttgcttgtgcggttgctctagcctcgatgtgagcggtcccctaggctctcctcgtgacccaacagtggtatcagagcctcggttcgacgaagggta 9956122  T
Q  101 cgaccga 107  Q
    |||||||    
T  9956123 cgaccga 9956129  T

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Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 22077862 - 22077722
Alignment:
Q  12 tgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggcc 111  Q
    ||||||||||| ||| |||||||||||||||| ||  ||||||||  ||| |||||||||| |||||||||| |||||||||||||||  |||| ||||     
T  22077862 tgcggttgttcaagcatcgatgtggacggtcctccaggctccccttgtgacccaacagtggcatcagagcccaggttcgacgaagggtatgaccaaggca 22077763  T
Q  112 gccggttagttgcgcagaaagcagcaacgacggtacaagca 152  Q
    ||||||  |||||| ||||| ||| ||||||| ||||||||    
T  22077762 gccggtccgttgcggagaaaccagtaacgacgatacaagca 22077722  T

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Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 37850637 - 37850547
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    |||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  37850637 cttgtgcggttgctctagcctcgatgtggacggtccccta-gctcccctcatgatccaactctggtatcagagccccggttcgacaaagggt 37850547  T

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Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 319
Target Start/End: Original strand, 37555990 - 37556126
Alignment:
Q  185 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaattgatggactcaca 283  Q
    |||||||||||||||||||| ||||||||||||||||| || | | || ||||||||||||  ||||| |||||| ||| ||| || |||||||||||||    
T  37555990 aagcagtgtcggtccgtttgcggagaaaccagcaacggcgatagaagc-aagtaagagctttagcttgaagggggggcaggataaagtgatggactcaca 37556088  T
Q  284 cttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||||||||||||||||  || | ||||||||||||||    
T  37556089 cttgagggggagtgttgttgtgtacaagtgtgagttat 37556126  T

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Target: chr1; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 41184451 - 41184341
Alignment:
Q  2 ctcttgcttgtgcggttgttctagcctcgatgtggacggtc-ccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||| ||||||||||||||| ||||||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||||||  | ||||||||||||    
T  41184451 ctcttacttgtgcggttgttccagcctcgatgtcgacggtccccccgagctcccctcactgatccaacagtggtatcagagcccgagctcgacgaagggt 41184352  T
Q  100 gcgaccgaggc 110  Q
      |||||||||    
T  41184351 aagaccgaggc 41184341  T

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Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 289
Target Start/End: Complemental strand, 41184298 - 41184198
Alignment:
Q  189 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttga 288  Q
    |||||||||||||||| ||| ||||||||||||  || |||  |||   ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  41184298 agtgtcggtccgtttgcggaaaaaccagcaacgacgatacaaacaagtaaagagcttccgcttgagggggagcacgatgaagtgatggactcacacttga 41184199  T
Q  289 g 289  Q
    |    
T  41184198 g 41184198  T

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Target: chr1; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 66349 - 66235
Alignment:
Q  202 ttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    |||||||||| |||||||||| || ||| ||||  |||||||||| |||||| |||||| || ||||||| ||||||||||||||||||||| ||||||     
T  66349 ttgtggagaagccagcaacggcgatacaagcaagataagagcttccgcttgatgggggaacatgatgaatagatggactcacacttgaggggaagtgtt- 66251  T
Q  301 gtttgcaagtgtgagt 316  Q
    || |||||||||||||    
T  66250 gtgtgcaagtgtgagt 66235  T

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Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 22077719 - 22077638
Alignment:
Q  237 taagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||| |||||| |||||||| |||||||  ||||||||||||||||||||||||||| || ||||||||||||||||    
T  22077719 taagagcttccgcttgatggggagcatgatgaatacatggactcacacttgagggggagtgtt-gtgtgcaagtgtgagttat 22077638  T

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Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 37555843 - 37555990
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| |||||||| ||||||||||||| ||||| | || |||||||  |||| ||||||||||||||||||||||  |||| ||||||||     
T  37555843 tctcttgcttgtgtggttgttcaagcctcgatgtgg-cggtcgctcgagctcccccaatgacccaacagtggtatcagagcccc-attcggcgaagggta 37555940  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
     || |||||| || |||  | ||||||| |||||||||||| ||||||||    
T  37555941 tgatcgaggcagctggtccgattgcgcaaaaagcagcaacggcggtacaa 37555990  T

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Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 41157109 - 41157257
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccc-tca-tgatccaacagtggtatcagagccccggttcgacgaagggtgc 101  Q
    ||||||||| |||||||||||||||||||||| |||||||||   ||||||| ||| ||| |||||| ||||||||||||||| ||||||| |||||| |    
T  41157109 ttgcttgtgtggttgttctagcctcgatgtgggcggtcccccaaggctccccttcagtgacccaacaatggtatcagagcccc-gttcgacaaagggtac 41157207  T
Q  102 gaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 150  Q
    |||| |||| | ||||  | ||||||| |||||| |||||||||||||||    
T  41157208 gaccaaggcagtcggtccgtttgcgcataaagcaacaacgacggtacaag 41157257  T

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Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 26661773 - 26661665
Alignment:
Q  214 cagcaacggagacacatgcaaagtaagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagt 310  Q
    ||||||||  || |||||||||||||||||||| |||||| ||| ||| | ||||||| ||||||||||||||| |||||||||||||  || | |||||    
T  26661773 cagcaacgacgatacatgcaaagtaagagcttccgcttgaagggagagtatgatgaatagatggactcacacttaagggggagtgttgttgtgtacaagt 26661674  T
Q  311 gtgagttat 319  Q
    |||||||||    
T  26661673 gtgagttat 26661665  T

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Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3537643 - 3537599
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3537643 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 3537599  T

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Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 44290500 - 44290448
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  44290500 tcttgcttgtacggttgttctagcctcgatgtggacggtcccccgagctcccc 44290448  T

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Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 188 - 319
Target Start/End: Complemental strand, 22077393 - 22077265
Alignment:
Q  188 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttg 287  Q
    ||||||||||| ||| | ||||||||| ||| ||| || ||| |||| ||||||||||  ||||||  | ||||| ||||||| ||||||| ||||||||    
T  22077393 cagtgtcggtctgtt-gcggagaaaccggcagcggcgatacaagcaa-gtaagagctttcgcttgatagcgagcatgatgaatagatggacacacacttg 22077296  T
Q  288 agggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||||| || ||||||||||||||||    
T  22077295 agggggagtgtt-gtgtgcaagtgtgagttat 22077265  T

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Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 45084490 - 45084557
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||  ||| ||||||||| ||||||    
T  45084490 tctcttgcttgtgcggttgttctaacctcgatgcggacggtcccccaggcttccctcatgacccaaca 45084557  T

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Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 47380012 - 47379928
Alignment:
Q  234 aagtaagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||| |||| ||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||   ||||||||||||||||    
T  47380012 aagtaagaacttccgcttgaggggggagcacgatgaattgttggacttacatttgagggggagtgttg--atgcaagtgtgagttat 47379928  T

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Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41142487 - 41142533
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 47  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  41142487 tctcttgcttgtgtggttgttctagcctcgatgtggacggtcccccg 41142533  T

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Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 24448212 - 24448292
Alignment:
Q  238 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||  |||||||||  |||||||||||||||||| |||||| ||||||||||||||| || ||||||||| ||||||    
T  24448212 aagagctttcgcttgagggaaagcacgatgaattgatgggctcacaattgagggggagtgtt-gtgtgcaagtgtaagttat 24448292  T

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Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 3537496 - 3537410
Alignment:
Q  68 agtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagc-agcaacgacggtacaagcagcaagtg 159  Q
    ||||||||||||||| |||||||||||||||| |||||||||    | ||||||  |||||||||| ||||||| ||||||||||||||||||    
T  3537496 agtggtatcagagccacggttcgacgaagggtacgaccgagg----cagttagt--cgcagaaagcaagcaacggcggtacaagcagcaagtg 3537410  T

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Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32168742 - 32168698
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  32168742 tctcttgcttgtgcggttgttctagcctcgatgtggacagtcccc 32168698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 41157323 - 41157390
Alignment:
Q  254 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| |||  || ||||||||||||||||    
T  41157323 gggggagcacgataaattgatggactcacacttaagggggagtattgttgtgtgcaagtgtgagttat 41157390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 17294706 - 17294773
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagcc 82  Q
    ||||| |||||||||||||||||||||| |||| ||||||||| ||| | |||||||| |||||||||    
T  17294706 ggttgctctagcctcgatgtggacggtcgcccgagctcccctcgtgacctaacagtggcatcagagcc 17294773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 3875361 - 3875315
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatga 61  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  3875361 ggttgttctagcctcgatgtggacggtcctccgagctcccctcatga 3875315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11977394 - 11977440
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 47  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||    
T  11977394 tctcttgcaagtgcggttgttctagcctcgatgtggacggtcccccg 11977440  T

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Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 21378099 - 21378049
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  21378099 ttgcttgtgtggttgttctagcctcaatgtggacggtcccctgcgctcccc 21378049  T

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Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 299
Target Start/End: Complemental strand, 30630846 - 30630800
Alignment:
Q  253 agggggagcacgatgaattgatggactcacacttgagggggagtgtt 299  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  30630846 agggggagcatgatgaattgatggactcacacttgagagggagtgtt 30630800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 50469306 - 50469224
Alignment:
Q  235 agtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||||||||||| |||| | ||||||| |||  ||| |||| |||||||||||||| || ||||||||||||||||    
T  50469306 agtaagagcttctgcttgaggaggagtatgatgaatagataaactgacac-tgagggggagtgtt-gtgtgcaagtgtgagttat 50469224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 3537562 - 3537495
Alignment:
Q  224 gacacatgcaaagtaa-gagcttctgcttga-gggggagcacgatgaattgatggactcacacttgag 289  Q
    ||||||||||| |||| ||||||| |||||| ||||||||| ||||| ||||||||||||||||||||    
T  3537562 gacacatgcaaggtaaagagcttccgcttgaagggggagcatgatgatttgatggactcacacttgag 3537495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 1188457 - 1188392
Alignment:
Q  234 aagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    |||||||||||||  ||||| ||| |||| |||||||||||||||||||||||||||  ||||||||    
T  1188457 aagtaagagcttccacttgaaggg-agcatgatgaattgatggactcacacttgaggatgagtgttg 1188392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 14318989 - 14319027
Alignment:
Q  9 ttgtgcggttgttctagcctcgatgtggacggtcccccg 47  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  14318989 ttgtgcggttgttctagcctcaatgtggacggtcccccg 14319027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40082520 - 40082574
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||||||||||| |||||||||||||||||||||  |||| ||| |||||||    
T  40082520 tctcttgcttgtgcgtttgttctagcctcgatgtggatagtcctccgagctcccc 40082574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 41157491 - 41157532
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtccc 44  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  41157491 tcttgcttgtgtggttgttctagcctcgatgtgggcggtccc 41157532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41759597 - 41759641
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    |||||||||| || |||||||||||||| ||||||||||||||||    
T  41759597 tctcttgcttatgtggttgttctagccttgatgtggacggtcccc 41759641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 50051718 - 50051666
Alignment:
Q  16 gttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||| |||||||||||||||||||  ||||||||| ||| ||||||    
T  50051718 gttgttctagcatcgatgtggacggtccccctagctcccctcgtgacccaaca 50051666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 22077143 - 22077109
Alignment:
Q  12 tgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||| |||||||||||||||||||||||    
T  22077143 tgcggttgttcaagcctcgatgtggacggtccccc 22077109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26661566 - 26661521
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||| ||||||| |||||||| ||||||||| |||||||||||||    
T  26661566 tctctcgcttgtgtggttgttcaagcctcgatatggacggtccccc 26661521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 30630619 - 30630586
Alignment:
Q  63 ccaacagtggtatcagagccccggttcgacgaag 96  Q
    |||||||||||||||||| |||||||||||||||    
T  30630619 ccaacagtggtatcagagtcccggttcgacgaag 30630586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38804399 - 38804370
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcg 30  Q
    ||||||||||||||||||||||||||||||    
T  38804399 tctcttgcttgtgcggttgttctagcctcg 38804370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45494018 - 45493973
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    |||||| ||| || |||||||| |||||||||||||||||||||||    
T  45494018 tctcttccttatgtggttgttcaagcctcgatgtggacggtccccc 45493973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5320009 - 5319965
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    |||||||||| || ||||||||||||||| |||| ||||||||||    
T  5320009 tctcttgcttatgtggttgttctagcctcaatgtagacggtcccc 5319965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 47380148 - 47380060
Alignment:
Q  63 ccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagc 151  Q
    |||||| |||||||||||||||| || || |||| || |||| |||||  ||||| ||||||  ||||| |||||| | ||||||||||    
T  47380148 ccaacaatggtatcagagccccgatttgatgaagagtacgactgaggcaaccggtcagttgcagagaaaccagcaatggcggtacaagc 47380060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 47380323 - 47380261
Alignment:
Q  258 gagcacgatgaattgatggactcacacttgagggg--gagtgttggtttgcaagtgtgagttat 319  Q
    ||||| |||||||||||||| ||||||||||||||  || |||| || ||||||||||||||||    
T  47380323 gagcatgatgaattgatggattcacacttgaggggaagattgtt-gtgtgcaagtgtgagttat 47380261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 5e-50; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 1014289 - 1014122
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggt-cccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    |||| |||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||| ||||||||||||||||||||||||||||||||||||    
T  1014289 tctcctgcttgtgcggttgttctagcctcgatgtggatggttcccccgagctcccccagtgatacaacagtggtatcagagccccggttcgacgaagggt 1014190  T
Q  100 gcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
     |||| ||||| ||||| | |||||||||||||| |||||| |||||||||||||||||||||||||||    
T  1014189 acgactgaggcagccgg-tcgttgcgcagaaagccgcaacggcggtacaagcagcaagtggctccttgt 1014122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 9309109 - 9309262
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgcc 114  Q
    ||||||||||||||||||||||||||||||||| |||||||   ||| |||| |||||||||||| |||| |||||||| ||||| ||||||||||||||    
T  9309109 ggttgttctagcctcgatgtggacggtcccccgagctcccccagtgacccaaaagtggtatcagaaccccagttcgacggagggtacgaccgaggccgcc 9309208  T
Q  115 ggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    ||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  9309209 ggtcagttgcgtagaaagcaacaacgacggcacaagcagcaagtggctccttgt 9309262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3669801 - 3669967
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||| ||||| ||||||||||||||||  ||| | |||||||     
T  3669801 tctcttgcttgtgcggttgttctagcctcgatgtggatggtccccctagctcccctcgtgacccaacggtggtatcagagccccccttcaatgaagggta 3669900  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    ||| |||||| ||||| | |||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  3669901 cgatcgaggcagccgg-tcgttgcgcagaaagccgcaacaacggtacaagcaacaagtggctccttgt 3669967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 3669973 - 3670075
Alignment:
Q  218 aacggagacacatgcaaagtaagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagt 316  Q
    ||||| || ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3669973 aacggcgatacatgcaaagtaagagcttctgcttgaagggtgagcatgatgaattgatggactcacacttgagggggactgttggtttgcaagtgtgagt 3670072  T
Q  317 tat 319  Q
    |||    
T  3670073 tat 3670075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 1014107 - 1014014
Alignment:
Q  227 acatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||||||||||||| |||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1014107 acatgcaaagtaagagcttccgcttgaagggggagtatgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 1014014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 189 - 292
Target Start/End: Complemental strand, 3038202 - 3038099
Alignment:
Q  189 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttga 288  Q
    |||||||||||||||| ||||||||||||||||| || |||    ||||||||||||| |||||||||||||| |||||||||||||||||||||||| |    
T  3038202 agtgtcggtccgtttgaggagaaaccagcaacggcgatacaaagcaagtaagagcttccgcttgagggggagctcgatgaattgatggactcacacttta 3038103  T
Q  289 gggg 292  Q
    ||||    
T  3038102 gggg 3038099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18372038 - 18371921
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggt-cccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||| ||||||||||||| ||||||||| ||||| ||||| |||||| ||||||||||||| |||||||||||||||||| || |||||||| ||||||    
T  18372038 tctctcgcttgtgcggttgctctagcctcaatgtgaacggttcccccgagctcccctcatgacccaacagtggtatcagag-cctggttcgacaaagggt 18371940  T
Q  100 gcgaccgaggccgccggtt 118  Q
     |||||||||| |||||||    
T  18371939 acgaccgaggcagccggtt 18371921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 191 - 319
Target Start/End: Original strand, 40518470 - 40518597
Alignment:
Q  191 tgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgaggggg-agcacgatgaattgatggactcacacttgag 289  Q
    |||||||||||||| ||||||||||||||||  || ||| |||| |||||||||||  |||||||||| |||| ||||||||||||||||||||||||||    
T  40518470 tgtcggtccgtttgcggagaaaccagcaacgacgatacaagcaa-gtaagagcttccacttgaggggggagcatgatgaattgatggactcacacttgag 40518568  T
Q  290 ggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||| || || | ||||||||||||||    
T  40518569 ggggagtatt-gtgttcaagtgtgagttat 40518597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34834990 - 34835104
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||  ||||| ||||  ||| |||||||||||||||||| ||||||||||||||||||     
T  34834990 tctcttgcttgtgtggttgttctagcctcgatgtggatgatcccttgcgct-ccctagtgacccaacagtggtatcagag-cccggttcgacgaagggta 34835087  T
Q  101 cgaccgaggccgccggt 117  Q
    |||||||||| ||||||    
T  34835088 cgaccgaggcagccggt 34835104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 147565 - 147718
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgc-gctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||||||||| |||||||| | |||||||  ||||||||   ||||||| ||||| ||||||||| |||||||||||||||||||| ||||||    
T  147565 tctcttgcttgtgcggtagttctagcattgatgtgggtggtcccccatagctcccc-catgacccaacagtgatatcagagccccggttcgacaaagggt 147663  T
Q  100 gcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 153  Q
     ||| |||||| ||| ||  | |||||||||||||||||||  ||||||||||||    
T  147664 acgatcgaggcagccagtccgtttgcgcagaaagcagcaacagcggtacaagcag 147718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40518185 - 40518294
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |  ||| | |||| ||||||||||||||| ||||||||||||||    
T  40518185 tctcttgcttgtgtggttgttctagccttgatgtggacggtcccccgagctccccccggtgaccaaacaatggtatcagagcccc-gttcgacgaagggt 40518283  T
Q  100 gcgaccgaggc 110  Q
     ||||||||||    
T  40518284 acgaccgaggc 40518294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 147712 - 147844
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 282  Q
    ||||||||||||||||||||| |||||||||| |||||  || |||     |||||||||||| |||| | ||||||||  |||||||||||||||||||    
T  147712 caagcagtgtcggtccgtttgcggagaaaccaacaacgacgataca-----agtaagagcttccgcttaaagggggagct-gatgaattgatggactcac 147805  T
Q  283 acttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||||||||  || ||||||||||||||||    
T  147806 acttgagggggagtgttgttgtgtgcaagtgtgagttat 147844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18372328 - 18372214
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggt-cccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||| ||||||||||||| | ||| ||||||||||||||| |||||| ||||||||||||| |||| ||||||||||||| || |||||||| ||||||    
T  18372328 tctctcgcttgtgcggttgctttagtctcgatgtggacggttcccccgagctcccctcatgacccaatagtggtatcagag-cctggttcgacaaagggt 18372230  T
Q  100 gcgaccgaggccgccg 115  Q
     |||||||||| ||||    
T  18372229 acgaccgaggcagccg 18372214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3038334 - 3038217
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctccc-ctca-tgatccaacagtggtatcagagccccggttcgacgaaggg 98  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |||| ||| |||||||||||||||||||| | ||||||| |||||    
T  3038334 tctcttgcttgtgtggttgttctagcctcgatgtggacggtcctccgagctccctctcagtgacccaacagtggtatcagagcctc-gttcgacaaaggg 3038236  T
Q  99 tgcgaccgaggccgccggt 117  Q
    |  |||| |||| ||||||    
T  3038235 taggaccaaggcagccggt 3038217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 3038006 - 3037874
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgct-cccctca-tgatccaacagtggtatcagagccccggttcgacgaagggtgcgacc 105  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||| ||||||| || |||  ||||    
T  3038006 cttgtgtggttgttctagcctcgatgtggacggtcccccgagctccccctcagtgacccaacagtggtatcagagcccc-gttcgacaaaaggtaggacc 3037908  T
Q  106 gaggccgccggttag-ttgcgcagaaagcagcaa 138  Q
     |||| ||||||  | ||||| ||||||||||||    
T  3037907 aaggcagccggtccgtttgcgtagaaagcagcaa 3037874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 318
Target Start/End: Complemental strand, 8919039 - 8918908
Alignment:
Q  188 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttg 287  Q
    ||||||||||||||||| | ||||| ||||||||| || ||| |||| || |||||||| |||| | ||||  || ||||||| ||||||||||||||||    
T  8919039 cagtgtcggtccgtttgcgaagaaatcagcaacggcgatacaagcaa-gttagagcttccgcttaaagggggacatgatgaatagatggactcacacttg 8918941  T
Q  288 agggggagtgttg--gtttgcaagtgtgagtta 318  Q
    |||||||||||||  || |||||||||||||||    
T  8918940 agggggagtgttgttgtgtgcaagtgtgagtta 8918908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 37544532 - 37544391
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcg 102  Q
    |||| |||||||||||||||||||||||||||||||| | ||||| | ||||||||||| |||||  || ||||||||||||  |||| |||||| ||||    
T  37544532 tcttacttgtgcggttgttctagcctcgatgtggacgat-ccccgagttcccctcatgacccaactctgatatcagagcccc-cttcgtcgaaggatgcg 37544435  T
Q  103 accgaggccgccggttag-ttgcgcagaaagcagcaacgacggt 145  Q
    | |||| | ||||||| | ||| ||| |||||||||||||||||    
T  37544434 atcgagacagccggttcgtttgtgcataaagcagcaacgacggt 37544391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 319
Target Start/End: Complemental strand, 18372640 - 18372514
Alignment:
Q  194 cggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgaggggga-gcacgatgaattgatggactcacacttgagggg 292  Q
    ||||||||||| ||||||||||||| ||| ||  ||  ||||  |||||||||  ||||| ||||| ||||||| || ||||||||||||||||||||||    
T  18372640 cggtccgtttgcggagaaaccagcagcggcgattcaaacaaataaagagcttccccttgaaggggaagcacgataaagtgatggactcacacttgagggg 18372541  T
Q  293 gagtgttggtttgcaagtgtgagttat 319  Q
    |||||||| | || |||||||||||||    
T  18372540 gagtgttgttgtgaaagtgtgagttat 18372514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 319
Target Start/End: Original strand, 45122907 - 45123021
Alignment:
Q  207 gagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtt 303  Q
    |||||||||||||||  || ||| |||| ||||||||||| |||||| |||||| || ||||||| |||||||| ||||||||||||||||||||  ||     
T  45122907 gagaaaccagcaacgacgatacaagcaa-gtaagagcttccgcttgaagggggaacatgatgaatagatggacttacacttgagggggagtgttgctgtg 45123005  T
Q  304 tgcaagtgtgagttat 319  Q
    ||||||||||||||||    
T  45123006 tgcaagtgtgagttat 45123021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 6731856 - 6731919
Alignment:
Q  256 gggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6731856 gggagcatgatgaatagatggactcacatttgagggggagtgttgttttgcaagtgtgagttat 6731919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40579313 - 40579258
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccct 56  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  40579313 tctcttgcttgtgcggttgttctagcctcgatgtggactgtcccccgagctcccct 40579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 18372465 - 18372399
Alignment:
Q  253 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| | || |||||||||||||    
T  18372465 agggggagcacgataaagtgatggactcacacttgagggggagtgttgttgtgaaagtgtgagttat 18372399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5915981 - 5916025
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  5915981 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 5916025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 8919184 - 8919042
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgac 104  Q
    ||||||||| |||||||||||| |||||||||||||||||||  ||| ||||| |||  ||||| ||||||||||| ||| |||| |||||||||  |||    
T  8919184 ttgcttgtgtggttgttctagcttcgatgtggacggtccccc-agcttccctcgtgactcaacaatggtatcagagtccc-gttcaacgaagggtatgac 8919087  T
Q  105 cgaggccgccggttag-ttgcgcagaaagcagcaacgacggtaca 148  Q
    |||||  ||||||  | ||| ||| |||| |||||||||||||||    
T  8919086 cgaggtagccggtccgattgtgcataaagtagcaacgacggtaca 8919042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 18371925 - 18371821
Alignment:
Q  194 cggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggg 292  Q
    |||| |||||| ||||||||||||| ||| || |||  ||||  ||||||||| |||||| ||||| ||||||| || ||||||||||||||||||||||    
T  18371925 cggttcgtttgcggagaaaccagcagcggcgatacaaacaaataaagagcttccgcttgaagggggggcacgataaagtgatggactcacacttgagggg 18371826  T
Q  293 gagtg 297  Q
    |||||    
T  18371825 gagtg 18371821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 9483227 - 9483084
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgat-ccaacagtggtatcagagccccggttcgacgaagggtgcga 103  Q
    ||||| ||||||||||||||||||||||||||||||| |||   ||||||||||  || |||||| |||  ||||||||||  || |||||||||| | |    
T  9483227 ttgctcgtgcggttgttctagcctcgatgtggacggttcccatagctcccctcagtatcccaacaatgg--tcagagcccc-tttggacgaagggtacaa 9483131  T
Q  104 ccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
    ||||||| | ||||  | |||||||||||||||||||| ||||||||    
T  9483130 ccgaggcagtcggtccgtttgcgcagaaagcagcaacggcggtacaa 9483084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6876906 - 6876852
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  6876906 tctcttgtttgtgtggttgttctagcctcgatgtggacggtcccccgagctcccc 6876852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 30359539 - 30359624
Alignment:
Q  237 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||  || | ||||||||||||||    
T  30359539 taagagcttccgcttgaagggggagcatgataaattgatggactcacacttgagggggaatgttgttgtgtacaagtgtgagttat 30359624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 45122738 - 45122882
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcg-----ctcccctcatgatccaacagtggtatcagagccccggttcgacgaa 95  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||  |     |||||| ||||| | |||||||| ||||||| ||  ||||||||||    
T  45122738 tctcttgcttgtgtggttgttcaagcctcgatgtggaaggtccccctggcccgactccccccatgaccaaacagtggcatcagag-cctagttcgacgaa 45122836  T
Q  96 gggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacg 140  Q
    |||| |||||||||| ||| ||  | |||||||||||||| |||||    
T  45122837 gggtacgaccgaggcagccagtccgtttgcgcagaaagcaacaacg 45122882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3670174 - 3670214
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3670174 tctcttgcttgtgcggttgttctagcctcgatgtggacggt 3670214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 9309303 - 9309370
Alignment:
Q  254 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||  || ||||||||||||||||    
T  9309303 gggggagcacgataaagtgatggactcacaattgagggggagtgttgttgtgtgcaagtgtgagttat 9309370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9482648 - 9482608
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9482648 tctcttgcttgtgcggttgttctagcctcgatgtggacggt 9482608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30441199 - 30441266
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||   ||||||||| ||| ||||||    
T  30441199 tctcttgcttgtgcggttgttctagcctcgatgtggacagtcaccttggctcccctcgtgacccaaca 30441266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 9608932 - 9609018
Alignment:
Q  66 acagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagc 151  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||   |||||  | ||||||| |||||||||||| ||||||||||    
T  9608932 acagtggtatcagtgccccggttcgacaaagggtacgaccgaggaaaccggtccgtttgcgcataaagcagcaacggcggtacaagc 9609018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 34835427 - 34835468
Alignment:
Q  259 agcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  34835427 agcatgatgaattgatggactcacacttgagggggagtgttg 34835468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 34835693 - 34835734
Alignment:
Q  259 agcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  34835693 agcatgatgaattgatggactcacacttgagggggagtgttg 34835734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 300
Target Start/End: Original strand, 45122515 - 45122627
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 282  Q
    ||||||||||||||||||||| |||| ||||| ||||   || |||     |||||||||||| ||| || ||||||||| ||||||| || | ||||||    
T  45122515 caagcagtgtcggtccgtttgcggaggaaccaacaacatcgataca-----agtaagagcttccgctggaagggggagcatgatgaatagaagaactcac 45122609  T
Q  283 acttgagggggagtgttg 300  Q
    ||||||||||||||||||    
T  45122610 acttgagggggagtgttg 45122627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 9309482 - 9309522
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  9309482 ggttgttctagcctcgatgtggacggtcccccgagctcccc 9309522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 9482857 - 9482766
Alignment:
Q  205 tggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    |||||||||||||||||| || ||| |||| ||||||||||| |||||| |||| ||||  ||||||| |||||||||  ||||||||||||||||    
T  9482857 tggagaaaccagcaacggcgatacaagcaa-gtaagagcttccgcttgaagggg-gcacagtgaattgttggactcac--ttgagggggagtgttg 9482766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 40579546 - 40579466
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccg 85  Q
    |||||||| ||||||||||| |||||||||||||| ||| ||  ||||||| ||||| |||  | ||||||||||||||||    
T  40579546 ttgcttgtacggttgttctatcctcgatgtggacgatcctccatgctccccacatgacccagtattggtatcagagccccg 40579466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 9620715 - 9620624
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    |||||| ||||| ||  |||| |||||||||||||||||| ||||||||| ||| |||||  |||||||||||    |||||||||||||||    
T  9620715 cttgtgtggttgctcaggcctggatgtggacggtcccccgggctcccctcgtgacccaacgatggtatcagagttgtggttcgacgaagggt 9620624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20870617 - 20870550
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||| |||||||||| ||| ||| |||||||||| ||  ||||||||||||| ||||||    
T  20870617 tctcttgcttgtgtggttgttctaaccttgatatggacggtcctcctggctcccctcatgacccaaca 20870550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30359385 - 30359500
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc-cgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaaggg 98  Q
    |||||| ||||||  |||||| ||||||| ||||||| ||| ||| || |||||||||| ||| ||||||||||||||||||  || |||||||||||||    
T  30359385 tctctttcttgtgatgttgttttagcctcaatgtggatggttccctcgagctcccctcaatgacccaacagtggtatcagag--cctgttcgacgaaggg 30359482  T
Q  99 tgcgaccgaggccgccggt 117  Q
      |||||||||| ||||||    
T  30359483 -acgaccgaggcagccggt 30359500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41129102 - 41129161
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatg 60  Q
    |||||| |||||| |||||||| | |||||||||||||||||||||  ||||||||||||    
T  41129102 tctcttacttgtgtggttgttcaaacctcgatgtggacggtcccccaggctcccctcatg 41129161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 18372907 - 18372842
Alignment:
Q  253 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||||||| || |||||||||||||||||| || |||||||| | || |||||||||||||    
T  18372907 agggggagcacgataaagtgatggactcacacttga-ggagagtgttgttgtgaaagtgtgagttat 18372842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 45121865 - 45121819
Alignment:
Q  254 gggggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    ||||||||||||| || |||||||||||||||| |||||||||||||    
T  45121865 gggggagcacgataaagtgatggactcacacttaagggggagtgttg 45121819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 4154506 - 4154449
Alignment:
Q  238 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgaggggga 294  Q
    |||||||||||||||||||| ||||| || |  |||||||||||||||||||||||||    
T  4154506 aagagcttctgcttgaggggtgagcatgaagttttgatggactcacacttgaggggga 4154449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6651608 - 6651653
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||    
T  6651608 tctcttgcttgtgcgattgttctaacctcgatgtggatggtccccc 6651653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 9483005 - 9482921
Alignment:
Q  65 aacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||| | ||||  | |||| ||||||  ||||||||||||||||    
T  9483005 aacaatggtatcagagccccg-ttcgacgaagggtacgaccgaggcagtcggtccgtttgcacagaaaaaagcaacgacggtacaa 9482921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 34835324 - 34835377
Alignment:
Q  2 ctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||  |||||||    
T  34835324 ctcttgcttgtgtggttattctagcctcgatgtagacggtccccctggctcccc 34835377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 34835590 - 34835643
Alignment:
Q  2 ctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||  |||||||    
T  34835590 ctcttgcttgtgtggttattctagcctcgatgtagacggtccccctggctcccc 34835643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 34835856 - 34835909
Alignment:
Q  2 ctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||  |||||||    
T  34835856 ctcttgcttgtgtggttattctagcctcgatgtagacggtccccctggctcccc 34835909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 40518697 - 40518738
Alignment:
Q  2 ctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 43  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  40518697 ctcttgcttgtgtggttgttctagcctcaatgtggacggtcc 40518738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43274679 - 43274626
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctccc 54  Q
    |||||| ||| || |||||||| |||||||||||||||||||||||| ||||||    
T  43274679 tctcttacttatggggttgttccagcctcgatgtggacggtcccccgagctccc 43274626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 18371697 - 18371637
Alignment:
Q  9 ttgtgcggttgttctagcctcgatgtggacgg-tcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||| |||||| ||||||||||||| ||||||| |||| |||||||| ||||||    
T  18371697 ttgtgcggttgctctagcttcgatgtggacggttcccccgagctctcctcatgacccaaca 18371637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25561859 - 25561815
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||    
T  25561859 tctcttgcttgtgtggttgctctagcctcgatgtggaaggtcccc 25561815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 43274777 - 43274710
Alignment:
Q  254 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||| || |||||||||||||||||||||  |||||||  || | ||||||||||||||    
T  43274777 gggggagcacgataaagtgatggactcacacttgagggacagtgttgttgtgtacaagtgtgagttat 43274710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9608859 - 9608898
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacgg 40  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  9608859 tctcttgctagtgaggttgttctagcctcgatgtggacgg 9608898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 18373157 - 18373094
Alignment:
Q  238 aagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    |||||||||  ||||| ||||||||||||| || |||||||||||||||||||  |||||||||    
T  18373157 aagagcttccccttgatgggggagcacgataaagtgatggactcacacttgagatggagtgttg 18373094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 3038074 - 3038020
Alignment:
Q  23 tagcctcgatgtggacggtcccccgcgct-cccctca-tgatccaacagtggtat 75  Q
    ||||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||    
T  3038074 tagcctcgatgtggacggtcccccgagctccccctcagtgacccaacagtggtat 3038020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4154712 - 4154614
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||| ||||||| ||||| ||| |||| ||||||   |||||| ||  ||||| |||||| ||||||||||||||| ||||  | |||||||||||||    
T  4154712 tctctcgcttgtgtggttgctctggcctagatgtgagtggtccctcggactcccttcatgacccaacagtggtatcaaagccgagtttcgacgaagggt 4154614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 37
Target Start/End: Complemental strand, 1013908 - 1013879
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtgga 37  Q
    ||||||||||||||||||||||||||||||    
T  1013908 cttgtgcggttgttctagcctcgatgtgga 1013879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1513959 - 1513914
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    |||||| | |||| |||| |||||||||||||||||||||||||||    
T  1513959 tctcttacatgtggggttattctagcctcgatgtggacggtccccc 1513914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 9483084 - 9483047
Alignment:
Q  185 aagcagtgtcggtccgtttgtggagaaaccagcaacgg 222  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  9483084 aagcagtgtcggtccgtttgcggagaaaccatcaacgg 9483047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6732009 - 6732045
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtgga 37  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  6732009 tctcttgcttatgcggttgttctaacctcgatgtgga 6732045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 5e-50; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 3340923 - 3341083
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcg 102  Q
    ||||||||||| |||||||||||||||||||||||||||| || | |||||||   ||| ||||||||||||||||||||||||||||||||| ||| ||    
T  3340923 tcttgcttgtggggttgttctagcctcgatgtggacggtctcctgagctcccccagtgacccaacagtggtatcagagccccggttcgacgaacggtacg 3341022  T
Q  103 accgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctc 163  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  3341023 accgaggtcgctggtcagttgcgcagaaagcagcaacgacggtacaaacaacaagtggctc 3341083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 45496675 - 45496812
Alignment:
Q  12 tgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggc 110  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45496675 tgcggttgttctagcctcgatgtagacggtccctcgagctccccttactgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggc 45496774  T
Q  111 cgccggttagttgcgcagaaagcagcaacgacggtaca 148  Q
    ||||||| ||||||| ||||||||||||||||| ||||    
T  45496775 cgccggtcagttgcgtagaaagcagcaacgacgataca 45496812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 10246036 - 10246212
Alignment:
Q  4 cttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggtgcg 102  Q
    |||||||||  ||||||||||||||||||||||||| ||||||  |||||||||  ||| ||||||||||||||||| ||||||||||| ||||||| ||    
T  10246036 cttgcttgtctggttgttctagcctcgatgtggacgctcccccaagctcccctcgctgacccaacagtggtatcagaaccccggttcgatgaagggtacg 10246135  T
Q  103 accgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacggc 179  Q
    || ||||||||| || ||||| |||||||||||||||||||||||||||| ||||||||| ||||| | ||||||||    
T  10246136 actgaggccgcctgtcagttgtgcagaaagcagcaacgacggtacaagcaacaagtggcttcttgtgcagcaacggc 10246212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 44621116 - 44621441
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||| |||| ||||||||||     
T  44621116 tctcttgcttgtgcggttattctagcctcgatgtggacggtcccc---gctcctctcatgatccaacagtggtatcagagccctggtttgacgaagggta 44621212  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacg---------gcaacggcagtgcaagcag 190  Q
    |||||||| | ||||||  | || ||||||||||||||||| || |||||| ||   || | ||| | | ||         ||||||||  | |||| ||    
T  44621213 cgaccgagacagccggtccgttttcgcagaaagcagcaacggcgatacaagtag--tgtcggtccgttttcgcagaaagcagcaacggcgatacaagtag 44621310  T
Q  191 tgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagg 290  Q
    ||||||||| ||||  |||| ||||||||||  || |||  |||   ||||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  44621311 tgtcggtccatttgcagagacaccagcaacgacgatacaaacaagtaaagagcttccgcttttgggggagcacgatgaattgatggactcacacttgagg 44621410  T
Q  291 gggagtgt--tggtttgcaagtgtgagttat 319  Q
    ||||||||  | || ||||||||||||||||    
T  44621411 gggagtgtcgttgtgtgcaagtgtgagttat 44621441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 41370471 - 41370637
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||  || |||   ||| ||||||||| ||||||||||||  ||||||||||||||    
T  41370471 tctcttgcttgagtggttgttctagcctcgatgtggacggtcccccgaacttccccagtgacccaacagtgatatcagagcccccattcgacgaagggtg 41370570  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    |||||||||| ||||| | ||||| |||||||| |||||| ||||||||||||||||| |||||||||    
T  41370571 cgaccgaggcagccgg-tcgttgcacagaaagccgcaacggcggtacaagcagcaagtagctccttgt 41370637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 20825950 - 20826104
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    |||||| ||| ||||||||||||||||| ||||||||| |||||||  |||||| ||| |||||||||||||| |||||||||||  |||||||||||||    
T  20825950 tctcttccttatgcggttgttctagccttgatgtggacagtcccccatgctcccttcaatgatccaacagtggcatcagagccccaattcgacgaagggt 20826049  T
Q  100 gcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaagcag 153  Q
     |||||||||| ||||||  | |||||||||||||||||||| ||||||||||||    
T  20826050 acgaccgaggcagccggtccatttgcgcagaaagcagcaacggcggtacaagcag 20826104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 23817723 - 23817572
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctc-atgatccaacagtggtatcagagccccggttcgacgaaggg 98  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||| ||||||  ||||||||||||    
T  23817723 tctcttgctagtgtggttgttctagcctcgatgtggacggtcccccatagctcccctcgatgatccaacagtggtatcatagcccc-attcgacgaaggg 23817625  T
Q  99 tgcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaag 150  Q
    | ||| |||||| |||||| |  ||||||||||||||||||||||||||||||    
T  23817624 tacgatcgaggcagccggtctgtttgcgcagaaagcagcaacgacggtacaag 23817572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 39404132 - 39404276
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| | | | ||||||||||||||    
T  39404132 tctcttgcttgtgtggttgttctagcctcgatgtggacggtcccccgagctcccctcactaatccaacagtggtatcag-gacactgttcgacgaagggt 39404230  T
Q  100 gcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacgg 144  Q
      ||||||||| ||||||  | ||||| ||||||||||||||||||    
T  39404231 atgaccgaggcagccggtccgtttgcgtagaaagcagcaacgacgg 39404276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 319
Target Start/End: Original strand, 39404273 - 39404413
Alignment:
Q  175 acggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgat 274  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||| || |||     |||||||||||| ||||||||| |||||||||||||||||    
T  39404273 acggcagtgcaagcagtgtcggtccgtttgcggagaaaccatcaacggcgataca-----agtaagagcttccgcttgagggagagcacgatgaattgat 39404367  T
Q  275 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||| |||||||||| |||||||||  || | ||||||||||||||    
T  39404368 ggact-acacttgaggaggagtgttgttgtgtacaagtgtgagttat 39404413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 44620773 - 44620880
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||||||||||| || |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||| | ||||||     
T  44620773 tctcttgcttgtgcggttgttatatcctcgatgtggacggtcccccaagctcccctcatgatccaatagtggtatcagagcccc-gttcgtcaaagggta 44620871  T
Q  101 cgaccgagg 109  Q
    |||||||||    
T  44620872 cgaccgagg 44620880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 190 - 319
Target Start/End: Original strand, 2740956 - 2741086
Alignment:
Q  190 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga--gggggagcacgatgaattgatggactcacacttg 287  Q
    |||||||||||||||  |||||||||||||||| || ||  |||||||||||||||| ||||||  ||| ||||| ||||||||||||||||||||||||    
T  2740956 gtgtcggtccgtttgcagagaaaccagcaacggcgatacgagcaaagtaagagcttccgcttgaaggggagagcatgatgaattgatggactcacacttg 2741055  T
Q  288 agggggagtgttggtttgcaagtgtgagttat 319  Q
    | ||||||||||  | ||||||||||||||||    
T  2741056 aaggggagtgtt-atgtgcaagtgtgagttat 2741086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 54108796 - 54108930
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 282  Q
    |||| ||||||||| |||||||||||||||||||||||| || ||| |||| ||||||||||| |||||| ||||||||| |||||||| || |||||||    
T  54108796 caagtagtgtcggttcgtttgtggagaaaccagcaacggcgatacaagcaa-gtaagagcttccgcttgaagggggagcatgatgaattaatagactcac 54108894  T
Q  283 acttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||| |||||||||||| || ||||||||| ||||||    
T  54108895 acttaagggggagtgtt-gtgtgcaagtgtcagttat 54108930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 49076871 - 49076766
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcg 102  Q
    |||||||||||||||||||||||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||||||| ||||||| |||||| |     
T  49076871 tcttgcttgtgcggttgttctagcctcgatgtggactgtcccctgagct-ccctcatgacccaacagtggtatcagagcccc-gttcgacaaagggtact 49076774  T
Q  103 accgaggc 110  Q
    ||||||||    
T  49076773 accgaggc 49076766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 299
Target Start/End: Original strand, 20826086 - 20826213
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaat 270  Q
    |||||||| || |||||||||| | |||||||| ||||||||||||||||| || ||| |||| |||| ||| || |||||| ||||||||| |||||||    
T  20826086 gcaacggcggtacaagcagtgttgatccgtttgcggagaaaccagcaacggcgatacaagcaa-gtaatagcgtccgcttgaagggggagcatgatgaat 20826184  T
Q  271 tgatggactcacacttgagggggagtgtt 299  Q
     ||||||||||||||||||||||||||||    
T  20826185 agatggactcacacttgagggggagtgtt 20826213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 18933102 - 18933008
Alignment:
Q  73 tatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| | |||| ||||||||  |||||| |||||||||||||||||||||||||||    
T  18933102 tatcagagccccggttcgacgaagtgtgcgaccgaggcagccgg-tggttgtgcagaaagtcgcaacggcggtacaagcagcaagtggctccttgt 18933008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 31691268 - 31691415
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||||||||||| || ||||||||||||||||||||||| |||  || |||||||  |||| ||||||||||||| |||||||  ||| ||||||||||     
T  31691268 tctcttgcttgtacgattgttctagcctcgatgtggacgatccttcgagctcccccaatgacccaacagtggtattagagccc--gtttgacgaagggta 31691365  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
    ||||||||||||| |||  | ||||||||||| ||||||  |||||||||    
T  31691366 cgaccgaggccgctggtccgtttgcgcagaaaacagcaaaaacggtacaa 31691415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 300
Target Start/End: Complemental strand, 16889444 - 16889315
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaat- 270  Q
    |||||||| || |||| |||||| ||||||||| ||||||||||||||||  || |||  |||   ||||||||| ||||||||||||||||||| ||      
T  16889444 gcaacggcggtacaagtagtgtccgtccgtttgaggagaaaccagcaacgacgatacaaacaagtaaagagcttccgcttgagggggagcacgattaaag 16889345  T
Q  271 tgatggactcacacttgagggggagtgttg 300  Q
    ||||||||||||||||||||||||||||||    
T  16889344 tgatggactcacacttgagggggagtgttg 16889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19895410 - 19895506
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaaggg 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||   ||||||| ||||| |||||||||||||||||||  |||||||||||||||    
T  19895410 tctcttgcttgtgcggttgttctagcctcgatgtgg-tggtccccatagctccccccatgacccaacagtggtatcagagcttcggttcgacgaaggg 19895506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 16889578 - 16889429
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||||| |||||| | |||||||| ||||||||||||||||||| || ||||||| | ||| |||||| ||||| ||||| ||| ||||||||||||||     
T  16889578 tctcttccttgtgtgattgttctaacctcgatgtggacggtccctcgagctccccacgtgacccaacaatggtaccagag-ccctgttcgacgaagggta 16889480  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 150  Q
    |||| |||||  |||||  | ||| |||||||||||||||| |||||||||    
T  16889479 cgactgaggcaaccggtccgtttgtgcagaaagcagcaacggcggtacaag 16889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 2740826 - 2740953
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgcc 114  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||       ||||||||||||||||||| |||||||||||||| |||||||||| |||    
T  2740826 ggttgttctagcctcgatatggatggtcccccgagctcccctca-------acagtggtatcagagcccc-gttcgacgaagggtacgaccgaggcagcc 2740917  T
Q  115 ggttag-ttgcgcagaaagcagcaacgacggtacaa 149  Q
    | |  | |||||||||||||||||||  ||||||||    
T  2740918 gatccgtttgcgcagaaagcagcaacagcggtacaa 2740953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22028411 - 22028303
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaaggg 98  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||   |||||||||| ||| |||||||||||||| ||||||| |||||||||||||    
T  22028411 tctcttgcttgtgaggttgttctagcctcaatgtggacggtcccccaaagctcccctcactgacccaacagtggtatcggagcccc-gttcgacgaaggg 22028313  T
Q  99 tgcgaccgag 108  Q
    |  |||||||    
T  22028312 tatgaccgag 22028303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11702341 - 11702281
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatga 61  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  11702341 tctcttgcttgtgcggttgttctagcctcgatgtgaacagtccccctcgctcccctcatga 11702281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 25483450 - 25483534
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccg 85  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||  |||||||   ||| ||||||||||||||| |||||||    
T  25483450 tctcttgcttgtgtggttgttctagcctcgatgtggacggtctccctggctcccccagtgacccaacagtggtatcatagccccg 25483534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 44620592 - 44620675
Alignment:
Q  238 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgt--tggtttgcaagtgtgagttat 319  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||||||||| |||||||  | || ||||||||||||||||    
T  44620592 aagagcttccgcttttgggggagcacgatgaattgatggactcacacttgaggtggagtgtcgttgtgtgcaagtgtgagttat 44620675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 49076722 - 49076589
Alignment:
Q  190 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatg--aattgatggactcacactt 286  Q
    ||||||||||||||||||||||||||||||||   | ||| || ||||||||| ||| ||||| ||||||| || ||||  || ||||||||||||||||    
T  49076722 gtgtcggtccgtttgtggagaaaccagcaacgacaatacaagc-aagtaagagtttccgcttgaagggggaacatgatgaaaagtgatggactcacactt 49076624  T
Q  287 gagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||| |||||||||  || ||||||||||||||||    
T  49076623 gaggaggagtgttgttgtgtgcaagtgtgagttat 49076589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44620467 - 44620568
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||   ||||| ||||||||||||||||||||||     || |||||||||||||||     
T  44620467 tctcttgcttgtgtggttgttctaaccttgatgtggacggtcccc---gctcctctcatgatccaacagtggtatc-----cctggttcgacgaagggta 44620558  T
Q  101 cgaccgaggc 110  Q
    | ||||||||    
T  44620559 caaccgaggc 44620568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39792902 - 39792842
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatga 61  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||    
T  39792902 tctcttgcttgtgtggttgttctagcctcgatgtggacggtcctctgagctcccctcatga 39792842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 43174262 - 43174405
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc-tcatgatcc-aacagtggtatcagagccccggttcgacgaagggtgcgacc 105  Q
    |||||| |||||||| ||||| |||||||||||||||||| ||||||| |||  | || ||||||||||||| ||| ||| ||||||||| |||  || |    
T  43174262 cttgtgtggttgttcaagccttgatgtggacggtcccccgagctccccctcacaaacccaacagtggtatcaaagcaccg-ttcgacgaaaggtaagatc 43174360  T
Q  106 gaggccgccggttagtt-gcgcagaaagcagcaacgacggtacaa 149  Q
    ||||| ||||||  ||| |||||||||| ||||||||||||||||    
T  43174361 gaggcagccggtccgtttgcgcagaaagtagcaacgacggtacaa 43174405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 18932983 - 18932901
Alignment:
Q  237 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||| ||| |||||| ||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||    
T  18932983 taagagtttccgcttgaagggggagcatgatgaatagatagactcacacttgaggggg-gtgttggtttgcaagtctgagttat 18932901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 45489622 - 45489501
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatg-aat 270  Q
    |||||||| || |||| |||||||||||||||| |||||| |||||||  | || ||| || ||||||||||||| |||||| | |||||| |||| ||     
T  45489622 gcaacggcggtacaagaagtgtcggtccgtttgcggagaacccagcaatagcgatacaagc-aagtaagagcttccgcttgaagaggagcatgatgaaaa 45489524  T
Q  271 tgatggactcacacttgaggggg 293  Q
     ||||||||||||||||||||||    
T  45489523 cgatggactcacacttgaggggg 45489501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 284
Target Start/End: Complemental strand, 22028263 - 22028163
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaattgatggactcac 282  Q
    |||| |||||||||||||||| ||||||||||||||||  ||  || || ||||||||||||  ||||| |||||||||||||||||  |||||||||||    
T  22028263 caagtagtgtcggtccgtttgcggagaaaccagcaacgacgattcaagc-aagtaagagctttcgcttgaagggggagcacgatgaaaagatggactcac 22028165  T
Q  283 ac 284  Q
    ||    
T  22028164 ac 22028163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 36629172 - 36629252
Alignment:
Q  239 agagcttctgcttgaggg-ggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||| |||||| || |||||| ||||||||||||| |||||||||||||||||||||| || | ||||||||||||||    
T  36629172 agagcttccgcttgaaggtggagcatgatgaattgatgggctcacacttgagggggagtgtt-gtgttcaagtgtgagttat 36629252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36629351 - 36629408
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |  ||||||||||    
T  36629351 tctcttgcttgtgtggttgttctagcctcgatgtggacggtcccacatgctcccctca 36629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43827553 - 43827610
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  43827553 tctcttacttgtgcggttgttctaacctcgatgtggacggtcccccgagcttccctca 43827610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 50002540 - 50002625
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccg 85  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||  |  |||| | ||| |||||| ||||||||||||||||    
T  50002540 tctcttacttgtgcggttgttctagcctcgatgtgggcggtcccccgaaccaccctaagtgacccaacaatggtatcagagccccg 50002625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 54108653 - 54108799
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgc 101  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||   |||||||   ||| ||||||| |||||||||||| | |||||||||||||| |    
T  54108653 tcttgcttgtgtggttgttctagcctcaatgtgg-cggtcccccatagctcccccagtgacccaacagcggtatcagagccac-gttcgacgaagggtac 54108750  T
Q  102 gaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 150  Q
    || |||||| ||||||  | ||||||| |||||||||| | |||||||||    
T  54108751 ga-cgaggcagccggtccgtttgcgcataaagcagcaatggcggtacaag 54108799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 34004620 - 34004560
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||| ||||||| ||||||    
T  34004620 cttgtgcggttgttctagcctcgatgtgaacggtctcccgagctcctctcatgacccaaca 34004560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32941165 - 32941128
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggac 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32941165 tctcttgcttgtgcggttgttctagcctcgatgtggac 32941128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 36608689 - 36608636
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||    
T  36608689 ggttgttctagcctcgatgtggacggtcccccaagctcccctcgtgacccaaca 36608636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50630797 - 50630740
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    ||||||||||||||||||||| |||||||||||||| |||||| ||  ||||||||||    
T  50630797 tctcttgcttgtgcggttgttttagcctcgatgtgggcggtccgcctagctcccctca 50630740  T

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Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 49076487 - 49076439
Alignment:
Q  7 gcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  49076487 gcttatgcgattgttatagcctcgatgtggacggtcccccgcgctcccc 49076439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1731689 - 1731646
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 44  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||    
T  1731689 tctcttgcttgtgtggttgttctagcctcaatgtggacggtccc 1731646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39404512 - 39404555
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 44  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  39404512 tctcttgcttgtgtggttgttctagcctcgatgtgaacggtccc 39404555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50459835 - 50459878
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 44  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||    
T  50459835 tctcttgcttgtgtggttgttctagcctcgatgtgcacggtccc 50459878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 22183299 - 22183261
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  22183299 cttgtacggttgttctagcctcgatgtggacggtccccc 22183261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 54017637 - 54017583
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||||||| || |||||||||||||||||||||||||||| |||  |||||||    
T  54017637 tctcttgcttatgtggttgttctagcctcgatgtggacggtctccctagctcccc 54017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 54343050 - 54343004
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 47  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||    
T  54343050 tctcttgcttgagtggttgttctagcctcgatgtggatggtcccccg 54343004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4390143 - 4390102
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtc 42  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  4390143 tctcttgcttgtgcagttgttctagcctcgatgcggacggtc 4390102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 50627748 - 50627668
Alignment:
Q  68 agtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtaca 148  Q
    ||||||||||||||||| ||||||| |||||| ||| |||||| ||||||| | |||| |||||||||||| || |||||||    
T  50627748 agtggtatcagagcccc-gttcgacaaagggtacgatcgaggcagccggttcgtttgcacagaaagcagcagcggcggtaca 50627668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 55933166 - 55933121
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    |||||| ||||| | |||||||||||||||||||||||||||||||    
T  55933166 tctcttacttgtacagttgttctagcctcgatgtggacggtccccc 55933121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23817497 - 23817457
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggt 41  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  23817497 tctcttgctagtgtggttgttctagcctcgatgtggacggt 23817457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 27426803 - 27426771
Alignment:
Q  49 gctcccctcatgatccaacagtggtatcagagc 81  Q
    |||||||||||||||||||||||||||||||||    
T  27426803 gctcccctcatgatccaacagtggtatcagagc 27426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36572133 - 36572177
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    ||||| |||||||||||||||| |||||||||||| |||||||||    
T  36572133 tctctcgcttgtgcggttgttcaagcctcgatgtgaacggtcccc 36572177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 39698986 - 39698918
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 69  Q
    |||||||||||||||||| |||||| |||||||||||| ||||   | |||| |||||| |||||||||    
T  39698986 tctcttgcttgtgcggttattctagtctcgatgtggacagtcctatgagctctcctcatcatccaacag 39698918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 41707392 - 41707340
Alignment:
Q  234 aagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacact 285  Q
    |||||||||||||  ||||| ||||||||| ||||||||||||||||||||||    
T  41707392 aagtaagagcttccccttgaagggggagcatgatgaattgatggactcacact 41707340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 54936323 - 54936363
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  54936323 ggttgttctagcctcgatgtggacagtcccccgagctcccc 54936363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 11783580 - 11783498
Alignment:
Q  16 gttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    |||| |||||||| |||||||  ||||||||  || |||||||||| ||||||||||||||| || | |||||| |||||||||    
T  11783580 gttgctctagcctagatgtgggtggtccccctggcacccctcatgacccaacagtggtatcaaag-ctcggttccacgaagggt 11783498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 18879928 - 18879987
Alignment:
Q  9 ttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||| |||||||||||| |||||||||||||||| ||| |||||||  |||| ||||||    
T  18879928 ttgtgtggttgttctagcttcgatgtggacggtcctccgagctcccccaatgacccaaca 18879987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 3244657 - 3244592
Alignment:
Q  253 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||| || ||||||| ||||||||||| ||| |||| ||||||| || ||||||||||||||||    
T  3244657 agggggaacatgatgaatagatggactcacgcttaagggagagtgtt-gtgtgcaagtgtgagttat 3244592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Original strand, 5882092 - 5882122
Alignment:
Q  261 cacgatgaattgatggactcacacttgaggg 291  Q
    |||||||||||||||||||||||||||||||    
T  5882092 cacgatgaattgatggactcacacttgaggg 5882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 52884810 - 52884844
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtg 35  Q
    ||||||||||||||||||| |||||||||||||||    
T  52884810 tctcttgcttgtgcggttgatctagcctcgatgtg 52884844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 54109026 - 54109060
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtg 35  Q
    |||||||||||||||||||||||||| ||||||||    
T  54109026 tctcttgcttgtgcggttgttctagcttcgatgtg 54109060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 3341083 - 3341143
Alignment:
Q  261 cacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||||| || ||||||||||||||||||||  ||||||||  || ||||||||||||||||    
T  3341083 cacgataaagtgatggactcacacttgaggcagagtgttgttgtgtgcaagtgtgagttat 3341143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 43174405 - 43174477
Alignment:
Q  185 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgaggggg 258  Q
    |||||||||||||| ||||| |||||||||| |||||| || |||  | ||||||||||||| |||||| ||||    
T  43174405 aagcagtgtcggtctgtttgcggagaaaccaacaacggcgatacaaac-aagtaagagcttccgcttgaagggg 43174477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22028003 - 22027935
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacag 69  Q
    ||||| |||| || ||||||| ||| |||||||||||| ||||| |  ||||||||||||| |||||||    
T  22028003 tctctcgcttatgtggttgttttagtctcgatgtggacagtccctcaggctcccctcatgacccaacag 22027935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 41370673 - 41370716
Alignment:
Q  275 ggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||    
T  41370673 ggactcacacttgagggg-agtgttggtttgaaagagtgagttat 41370716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 7e-49; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 6500564 - 6500729
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | | ||||||||||||||||||  |||||||||||||||||    
T  6500564 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccaggctcccctcacttacccaacagtggtatcagagttccggttcgacgaagggt 6500663  T
Q  100 gcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcctt 166  Q
    || |||||||| ||| | | |||||||||||||| |||||| ||||| |||||||||||||||||||    
T  6500664 gcaaccgaggcagccag-tcgttgcgcagaaagccgcaacggcggtataagcagcaagtggctcctt 6500729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 38427333 - 38427486
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctc-atgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||| |||||| || |||||||||||||||||| |||||||||||||||||||||||    
T  38427333 tctcttgcttgtgcggttgttctaacctcgatgttggcggtcccccgagctcccttcgatgatccaacagtggtattagagccccggttcgacgaagggt 38427432  T
Q  100 gcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggtacaagca 152  Q
    | |||| || | ||| || |  ||||||||||| ||||||||||| ||||||||    
T  38427433 gtgaccaagacagccagtctgtttgcgcagaaaccagcaacgacgatacaagca 38427486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 32487507 - 32487661
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||  ||| ||| ||||| |||||  |||||||||||||||| ||||||||||||||    
T  32487507 tctcttgcttatgtggttgttctagcctcgatgtggatggtcccccaagcttcccccatgacccaactctggtatcagagccccgattcgacgaagggtg 32487606  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaa 156  Q
    |||| ||||| ||| | | |||| ||||||||| |||||| |||||||||||||||    
T  32487607 cgactgaggcagcc-gatcgttgtgcagaaagccgcaacggcggtacaagcagcaa 32487661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 9498679 - 9498534
Alignment:
Q  21 tctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttag 120  Q
    ||||||||| ||||||||||||||||  ||||||||| ||| ||||  | ||||||||||||||| |||||| |||||| |||||||||| ||||||  |    
T  9498679 tctagcctcaatgtggacggtccccctagctcccctcgtgacccaagtgcggtatcagagccccg-ttcgacaaagggtacgaccgaggcagccggtc-g 9498582  T
Q  121 ttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||||    
T  9498581 ttgcgcagaaagctgcaacggcgctacaagcagcaagtggctccttgt 9498534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 624077 - 624211
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcaca 283  Q
    |||| |||||||||||||||| |||||| |||||||||| || |||     |||||||||||| |||| | |||||||| ||||||| |||||| |||||    
T  624077 caagtagtgtcggtccgtttgcggagaacccagcaacggcgatacaaagcgagtaagagcttccgcttaaaggggagcatgatgaatagatgga-tcaca 624175  T
Q  284 cttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||| ||||||||||||||||||||||||||    
T  624176 cttgaggggaagtgttggtttgcaagtgtgagttat 624211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 6500749 - 6500838
Alignment:
Q  231 gcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6500749 gcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgatggggagtgttggtttgcaagtgtgagttat 6500838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 319
Target Start/End: Complemental strand, 13416051 - 13415903
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaat 270  Q
    |||||||| ||||||||||| |||||||||||| |||||||||| |||| | || ||| || ||||||||||||| ||||| |||||||||| | |||||    
T  13416051 gcaacggcggtgcaagcagtctcggtccgtttgcggagaaaccatcaacagcgatacaagc-aagtaagagcttccgcttgaagggggagcatgctgaat 13415953  T
Q  271 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
     ||||||||||||||||| |||||||| ||  || ||||||||||||||||    
T  13415952 agatggactcacacttga-ggggagtgctgttgtgtgcaagtgtgagttat 13415903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 25328049 - 25328195
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||  ||| ||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||||||| |||||||||  ||||||||||||     
T  25328049 tctcttgcaagtgtggttgttctagcctcaatgtggacggtcccccgagctcccctcagtgacccaacagtggtaccagagccccccttcgacgaagggc 25328148  T
Q  100 gcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggt 145  Q
     ||| |||||| ||||||  | |||| || |||||||||||| ||||    
T  25328149 acgaacgaggcagccggtccgtttgcacaaaaagcagcaacggcggt 25328195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 3295287 - 3295180
Alignment:
Q  192 gtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgaggg 291  Q
    ||||||||||||| | ||||| ||||||||| || ||| |||| ||||||||||| |||| |||||||||||||  || |||||||||||||||||||||    
T  3295287 gtcggtccgtttgcgcagaaagcagcaacggcgatacaagcaa-gtaagagcttccgcttaagggggagcacgaaaaagtgatggactcacacttgaggg 3295189  T
Q  292 ggagtgttg 300  Q
    |||||||||    
T  3295188 ggagtgttg 3295180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 3295389 - 3295246
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||  ||||       ||||  ||||| |||||||     
T  3295389 tctcttgcttgtgtggttgttctagcctcgatgtggacggtccccctcactcccctcatgatccaactctggt-------cccc--ttcgatgaagggta 3295299  T
Q  101 cgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagca 152  Q
    |||||||||| | ||||  | |||||||||||||||||||| || ||||||||    
T  3295298 cgaccgaggcagtcggtccgtttgcgcagaaagcagcaacggcgatacaagca 3295246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 299607 - 299720
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtccccc-gcgctcccctcatga-tccaacagtggtatcagagccccggttcgacgaagggtgcg 102  Q
    |||||||| ||||||||||||| ||||||||||| ||||||| | |||||||||||||  |||||||||||||||||||| | |||||||||||||||||    
T  299607 ttgcttgtacggttgttctagcatcgatgtggacagtcccccggagctcccctcatgaccccaacagtggtatcagagcctc-gttcgacgaagggtgcg 299705  T
Q  103 accgaggccgccggt 117  Q
    | | |||| ||||||    
T  299706 atcaaggcagccggt 299720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 623939 - 624080
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccg 106  Q
    |||||| ||||||||||||||| |||| |||||||||||| |||  ||||| ||| |||||||||||||||||| ||| |||||| ||||||| ||||||    
T  623939 cttgtggggttgttctagcctcaatgtagacggtcccccgagct--cctcagtgacccaacagtggtatcagag-ccctgttcgaagaagggtacgaccg 624035  T
Q  107 aggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 150  Q
     ||| | ||||  | |||||||||||| |||||||||||||||||    
T  624036 tggcagtcggtccgtttgcgcagaaagaagcaacgacggtacaag 624080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 24489424 - 24489347
Alignment:
Q  241 agcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||| || | ||||||||||||||    
T  24489424 agcttctggttgaggggtagcatgatgaattgatggactcacacttgagggggagtgtt-gtgttcaagtgtgagttat 24489347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42405642 - 42405588
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42405642 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgagctcccc 42405588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 6224314 - 6224418
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgac 104  Q
    ||||||||||||||| ||||||||| || |||||||||||||  ||||||||| || ||| ||||  ||||||||| |||||||||||||||||| ||||    
T  6224314 ttgcttgtgcggttggtctagcctcaatatggacggtcccccaggctcccctcgtgttcctacagcagtatcagag-cccggttcgacgaagggtacgac 6224412  T
Q  105 cgaggc 110  Q
     |||||    
T  6224413 tgaggc 6224418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 26075205 - 26075058
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgc-gctcccctcatg--atccaacagtggtatcagagccccggttcgacgaagg 97  Q
    ||||||||  ||| ||||||| ||||||||||||||||  ||||||   |||||||| | |  |||||||||||||||||||||| || |||||||||||    
T  26075205 tctcttgcaagtgtggttgttttagcctcgatgtggactatccccctaagctcccctaaagcgatccaacagtggtatcagagcctcg-ttcgacgaagg 26075107  T
Q  98 gtgcgaccgaggccgccggt-tagttgcgcagaaagcagcaacgacggt 145  Q
    || |||||||||| |||||| |  |||||||||||||||||||| ||||    
T  26075106 gtacgaccgaggcagccggtctgtttgcgcagaaagcagcaacggcggt 26075058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27502080 - 27502013
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||| ||||||    
T  27502080 tctcttgcttgtgtggttgttctatcctcgatgtggacggtccccctagctcccctcatgacccaaca 27502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40296359 - 40296292
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||| ||||||    
T  40296359 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccaggcctccctcatgacccaaca 40296292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3295059 - 3294993
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaac 67  Q
    ||||||| ||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||||    
T  3295059 tctcttggttgtgtggttgttgtagcctcgatgtggacagtccccctcgctcccctcatgatccaac 3294993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6500936 - 6501015
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcaga 79  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||  |||||||||| | | |||| ||||||||||||    
T  6500936 tctcttacttgtgcggttattctagcctcgatgtggacggtcccccaggctcccctcacttacccaatagtggtatcaga 6501015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 1028554 - 1028504
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  1028554 cttgtgcggttgttctagcctcgatgtggacggtccccctagctcccctca 1028504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 9498493 - 9498411
Alignment:
Q  218 aacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgtt 299  Q
    ||||| || ||| ||||||||||||||||  ||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  9498493 aacggtgatacaggcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggtgtgtt 9498411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15370213 - 15370267
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||    
T  15370213 tctcttgcttgtgggattgttctagcctcgatgtggacggtcccccgagctcccc 15370267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 36522120 - 36522039
Alignment:
Q  238 aagagcttctgcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||| |||||||| ||||  |||||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||    
T  36522120 aagagcttccgcttgaggtgggataacgatgaattgatggactcacacttgagggagagtgtt-gtgcgcaagtgtgagttat 36522039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 26074993 - 26074925
Alignment:
Q  253 agggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||  || | ||||||||||||||    
T  26074993 agggggagcttgatgaattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttat 26074925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 31509555 - 31509638
Alignment:
Q  238 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttat 319  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||  |||| || ||||||||||||||||    
T  31509555 aagagcttccgcttgaggggtgagcatgatgaattgatggactcacacttgagggagagattgtt-gtgtgcaagtgtgagttat 31509638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34753069 - 34753001
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagt 70  Q
    |||||||||||||||||||||||||||||||||||||||||  |||  ||||||| ||||| ||||||||    
T  34753069 tctcttgcttgtgcggttgttctagcctcgatgtggacggtttcccaagctcccc-catgacccaacagt 34753001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 13416136 - 13416033
Alignment:
Q  50 ctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagtt-gcgcagaaagcagcaacgacggtaca 148  Q
    |||||||  ||| |||||||||||||||||| |||| |||| |||||||| ||||||||||  |||||  ||| |||||||||||||||||| |||| ||    
T  13416136 ctcccctagtgacccaacagtggtatcagagtcccg-ttcgtcgaagggtacgaccgaggcaaccggtccgtttgcgcagaaagcagcaacggcggtgca 13416038  T
Q  149 agcag 153  Q
    |||||    
T  13416037 agcag 13416033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15370516 - 15370575
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatg 60  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| ||  ||||||||||||    
T  15370516 tctcttgtttgtggggttgttctagcctcgatgtggacggtcctccatgctcccctcatg 15370575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36492261 - 36492218
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccc 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  36492261 tctcttgcttgtgtggttgttctagcctcgatgtggacggtccc 36492218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 35150607 - 35150719
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagt--aagagcttctgc-ttgagggggagcacgatgaattgatggactc 280  Q
    ||||||||||||||||||||| |||||| |||||||||| || |||    ||||  || |||||| || ||| ||| ||||| |||||||||||||||||    
T  35150607 caagcagtgtcggtccgtttgcggagaacccagcaacggtgatacaaagcaagtaaaaaagcttccgctttgggggtgagcatgatgaattgatggactc 35150706  T
Q  281 acacttgaggggg 293  Q
    ||||||| |||||    
T  35150707 acacttggggggg 35150719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41632896 - 41632941
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  41632896 tctcttgcttgtgcggttgttttagtctcgatgtggacggtccccc 41632941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 299
Target Start/End: Original strand, 26074477 - 26074605
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgaggggg-agcacgatgaat 270  Q
    |||||||| ||||||||| |||||||| ||||| | |||| ||| ||| ||  | |||    |||||||||||||  ||||| || | |||| ||| |||    
T  26074477 gcaacggcggtgcaagcaatgtcggtctgtttgcgaagaacccaacaatggcaatacaaagcaagtaagagcttccacttgaaggagtagcatgatcaat 26074576  T
Q  271 tgatggactcacacttgagggggagtgtt 299  Q
    |||||||||||||||||||||||||||||    
T  26074577 tgatggactcacacttgagggggagtgtt 26074605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 624317 - 624364
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  624317 cttgtggggttgttctagcctcgatgtggacggttccccgagctcccc 624364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26900061 - 26899995
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||  ||||||| ||||| ||||||    
T  26900061 tctcttgcttgtgggtttgttctagccttgatgtggacggtcccccaagctcccc-catgacccaaca 26899995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 35150491 - 35150613
Alignment:
Q  34 tggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggc----cgccggt-tagttgcgcag 128  Q
    |||||||||||||| ||| | | | ||| |||||||||||||||||||||| ||| ||||||||||  |||||||||     |||||| |  ||||||||    
T  35150491 tggacggtcccccgagcttctcac-tgacccaacagtggtatcagagcccc-gtttgacgaagggtatgaccgaggcaggtagccggtctgtttgcgcag 35150588  T
Q  129 aaagcagcaacgacggtacaagcag 153  Q
    |||||||||||||||| ||||||||    
T  35150589 aaagcagcaacgacggaacaagcag 35150613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 12662694 - 12662614
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctc---ccctcatgatccaacagtggtatcagag 80  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||| || ||   ||||||||| |||||  |||||||||||    
T  12662694 tcttgcttgtggggttcttctagcctcgatgtggtcggtccccctcgttccctccctcatgacccaactctggtatcagag 12662614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 13785837 - 13785752
Alignment:
Q  234 aagtaagagcttctgcttgagggggag-cacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||| |||||| |||||  || ||||||| ||| |||||||| ||||||||||||||| || || |||||||||||||    
T  13785837 aagtaagagcttccgcttgaaggggaaacatgatgaatagatagactcacatttgagggggagtgtt-gtgtggaagtgtgagttat 13785752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 36568606 - 36568556
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    |||||| |||||||||| |||||||||||| ||||||||| ||||||||||    
T  36568606 cttgtgtggttgttctatcctcgatgtggaaggtcccccgagctcccctca 36568556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 319
Target Start/End: Complemental strand, 36522459 - 36522380
Alignment:
Q  241 agcttctgcttgagggg--gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||| ||||||||||  || ||||||||||||||||| | ||| ||||||||||||||| || || |||||||||||||    
T  36522459 agcttccgcttgaggggaggaacacgatgaattgatggatttacaattgagggggagtgtt-gtatgaaagtgtgagttat 36522380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 38427461 - 38427553
Alignment:
Q  208 agaaaccagcaacggagacacatgcaaagtaagagcttctgcttgag-ggggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    ||||||||||||||  || ||| |||| |||||||||||  |||||  |||| |||  |||||| |||||||||||||||||||||||||||||    
T  38427461 agaaaccagcaacgacgatacaagcaa-gtaagagcttcctcttgaaaggggtgcatcatgaatagatggactcacacttgagggggagtgttg 38427553  T

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Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18603164 - 18603124
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggt 41  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  18603164 tctcttgcttgtgtggtagttctagcctcgatgtggacggt 18603124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11417021 - 11416970
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctc 52  Q
    ||||||||||||| | |||||||||| |||||||||| |||||||| |||||    
T  11417021 tctcttgcttgtgggattgttctagcttcgatgtggatggtccccctcgctc 11416970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 13786029 - 13785879
Alignment:
Q  17 ttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccgg 116  Q
    ||||||| |||||| ||| ||||||||| |   |||||||||||| ||| || |||||||||||||  | || | | || ||  |||| ||||  |||||    
T  13786029 ttgttctggcctcgttgtcgacggtccctctaactcccctcatgacccatcaatggtatcagagcctag-ttgggcaaaaggcacgactgaggtagccgg 13785931  T
Q  117 ttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    |  |||||||||||| || ||||||||||||| | |||||||||||| ||||    
T  13785930 tctgttgcgcagaaaacaacaacgacggtacatgtagcaagtggctctttgt 13785879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 316
Target Start/End: Original strand, 15370380 - 15370426
Alignment:
Q  272 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagt 316  Q
    |||||||||||||||||||||||||||||  || |||||||||||||    
T  15370380 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagt 15370426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 35150134 - 35150228
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggc 110  Q
    |||||||||| |||| |||||||| ||||||   ||||||| ||||| |||||  ||||||||||| | | |||||||||||||| ||||| ||||    
T  35150134 ggttgttctaacctcaatgtggaccgtcccctt-gctccccccatgacccaactctggtatcagagtcgcagttcgacgaagggtacgaccaaggc 35150228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 41170750 - 41170793
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||    
T  41170750 tcttgcttgtgtggttgttctagcctcggtgtagacggtccccc 41170793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 3622910 - 3622828
Alignment:
Q  25 gcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 107  Q
    |||| |||||||  ||||||| | ||| ||||||||| |||||| |||||||||||    ||||||||||||||| |||||||    
T  3622910 gcctggatgtgggtggtccccagggcttccctcatgacccaacaatggtatcagagttgaggttcgacgaagggttcgaccga 3622828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 13415804 - 13415774
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcga 31  Q
    |||||||||||||||||||||||||||||||    
T  13415804 tctcttgcttgtgcggttgttctagcctcga 13415774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 26074330 - 26074289
Alignment:
Q  277 actcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  26074330 actcacacttgagggggagtgtt-gtgtgcaagtgtgagttat 26074289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 24489560 - 24489515
Alignment:
Q  64 caacagtggtatcagagccccggttcgacgaagggtgcgaccgagg 109  Q
    |||||||||||||||| ||||| | ||||||||||| |||||||||    
T  24489560 caacagtggtatcagaaccccgatccgacgaagggtacgaccgagg 24489515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 795141 - 795081
Alignment:
Q  9 ttgtgcggttgttctagcctcgatgtggacggt-cccccgcgctcccctcatgatccaaca 68  Q
    ||||| |||| || |||||||||||| |||||| |||||| ||||||||||||| ||||||    
T  795141 ttgtgtggttattttagcctcgatgtagacggttcccccgagctcccctcatgacccaaca 795081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 24489243 - 24489207
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtccc 44  Q
    |||||||||||||||||| |||||||||| |||||||    
T  24489243 cttgtgcggttgttctagtctcgatgtgggcggtccc 24489207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33747885 - 33747925
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggt 41  Q
    |||||| ||| ||||||||||||||||| ||||||||||||    
T  33747885 tctcttccttatgcggttgttctagccttgatgtggacggt 33747925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 36178649 - 36178508
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||||||||||||| || ||| |||| |||||||||||||||||||||||||||||||||    
T  36178649 tctcttgcttgtgtggttgttctagcctctatgtggacgatcccccgcgctccc-tcgtgacccaatagtggtatcagagccccggttcgacgaagggtg 36178551  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacg 143  Q
    ||||| ||||| ||||| |||||||||||||||||||| ||||    
T  36178550 cgaccaaggccaccggtcagttgcgcagaaagcagcaatgacg 36178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37106038 - 37106154
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||||    
T  37106038 tctcttgcttgtacggttgttctagcctcgatgtggacggtcccccgagctccccttgtgacccaacagtggtatcagagccccggttcgacgaagggtg 37106137  T
Q  101 cgaccgaggccgccggt 117  Q
    |||| ||||||||||||    
T  37106138 cgactgaggccgccggt 37106154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 29676643 - 29676819
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||| |||| ||| | |||||||||||||||||||| |  ||||||   ||| ||||||||||||||||||||||||||| |||||||||     
T  29676643 tctcttgcttgtggggttattcaaacctcgatgtggacggtccccggaactccccag-tgacccaacagtggtatcagagccccggttcaacgaagggta 29676741  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgtacggcaacgg 178  Q
     ||| |||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||||||    
T  29676742 tgactgaggccgccgatcagttgcgcagaaagcaacaacgacagtacaagcagcaagtggctccttgtgcagcaacgg 29676819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 14745711 - 14745544
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc-tcatgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||||||  ||| |||||||||||||||||||||||| |||||||| ||||||| || ||| ||||||||||||||||||||||||||||| |||||||    
T  14745711 tctcttgcaagtgtggttgttctagcctcgatgtggacagtcccccgagctccccctcgtgacccaacagtggtatcagagccccggttcgatgaagggt 14745612  T
Q  100 gcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    |||||| |||| ||| | | ||| |||||||||| |||||||| ||||||||| |||||||||||||||    
T  14745611 gcgaccaaggcagcc-gatcgttacgcagaaagccgcaacgacagtacaagcaacaagtggctccttgt 14745544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 7598349 - 7598494
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 107  Q
    ||||||||||||||| |||||||||||| ||||||||| |  |||||||| ||| |||||| |||||||| ||||| ||||||||||||||| |||| ||    
T  7598349 cttgtgcggttgttcaagcctcgatgtgaacggtcccctgatctcccctcgtgacccaacactggtatcaaagcccaggttcgacgaagggtacgactga 7598448  T
Q  108 ggccgccggttagttgcgcagaaagcagcaacgacggtacaagcag 153  Q
    ||  ||||||  ||||||||||||||||||||||||||||||||||    
T  7598449 ggtagccggtccgttgcgcagaaagcagcaacgacggtacaagcag 7598494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 319
Target Start/End: Original strand, 3672954 - 3673100
Alignment:
Q  176 cggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaattgat 274  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||   | ||||||||||||| |||||| ||||| || ||||||| |||||||||||    
T  3672954 cggcggtgcaagcagtgtcggtccgtttgcggagaaaccagcaacgacaatacatgcaaagtaaaagcttccgcttgaagagggagcatgatgaattgat 3673053  T
Q  275 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||||||||||||||| |||||||||  || ||||||||||||||||    
T  3673054 ggactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttat 3673100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 5543038 - 5542876
Alignment:
Q  5 ttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgac 104  Q
    |||||||||||||||||| |||||||||||||||||| ||  | ||||||| |||||||||||||||||||||||||  ||||||||||| |  ||| ||    
T  5543038 ttgcttgtgcggttgttcaagcctcgatgtggacggtaccttgagctccccccatgatccaacagtggtatcagagcttcggttcgacgacgaatgcaac 5542939  T
Q  105 cgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    |||||| | ||| | |||| ||||||||| |||||| ||||||||||| |||||||||||||||    
T  5542938 cgaggcagtcgg-tcgttgtgcagaaagccgcaacggcggtacaagcaacaagtggctccttgt 5542876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6421499 - 6421648
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| || ||||||| ||||||     
T  6421499 tctcttgcttgtgcggttgttctagtctcgatgtggacggtcccccgagctcccctcgtgacccaacagtggtatcagagcacc-gttcgacaaagggta 6421597  T
Q  101 cgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagc 151  Q
    |||| ||||  || |  |  ||| |||||||||||||||||| ||||||||    
T  6421598 cgactgagggagctgtctgtttgtgcagaaagcagcaacgacagtacaagc 6421648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 23346350 - 23346502
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||| |||||| ||||||||||| ||||||| |||| |||||     
T  23346350 tctcttgcttgtgcggttgttctagcctagatgtggacggtcgcccgagctcccctcatgacccaacaatggtatcagag-cccggtttgacgtagggta 23346448  T
Q  101 cgaccgaggccgccggttagt-tgcgcagaaagcagcaacgacggtacaagcag 153  Q
    |||||||||  ||||||  || ||||||||||||| ||| | | ||||||||||    
T  23346449 cgaccgaggtagccggtctgtctgcgcagaaagcaacaatggcagtacaagcag 23346502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 319
Target Start/End: Complemental strand, 36785854 - 36785706
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaatt 271  Q
    |||||||| || |||||||| ||| ||||||||  |||||||||||||||  || |||  | ||||||||||||| ||||||||||||||| ||||||||    
T  36785854 gcaacggcggtacaagcagtatcgatccgtttgcagagaaaccagcaacgacgataca-accaagtaagagcttccgcttgagggggagcatgatgaatt 36785756  T
Q  272 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||||| |||||||||||||  || ||||||||||||||||    
T  36785755 gatggactcacactttagggggagtgttgttgtgtgcaagtgtgagttat 36785706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 42514763 - 42514866
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||| ||||||||||||||     
T  42514763 tctcttacttgtggggttgttctagcctcgatgtggacggtcccccgagctcccctcgtgacccaacagtggtatcagag-ccctgttcgacgaagggta 42514861  T
Q  101 cgacc 105  Q
    |||||    
T  42514862 cgacc 42514866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 6421852 - 6421954
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 107  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||| ||||||||| |||||| |||||||    
T  6421852 cttgtgtggttgttctggcctcgatgtggacggtcccccgagctcccctcatgacccaacggtggtattagagcctcggttcgacaaagggtacgaccga 6421951  T
Q  108 ggc 110  Q
    |||    
T  6421952 ggc 6421954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 231 - 319
Target Start/End: Complemental strand, 5542857 - 5542768
Alignment:
Q  231 gcaaagtaagagcttctgcttgaggggga-gcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||| |||||||| |||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5542857 gcaaagttagagcttccgcttgaaggggaagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 5542768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35580768 - 35580659
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtg 100  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||   ||||||  |||| |||| | ||||||||||||||||||||||||||||||     
T  35580768 tctcttgtttgtggggttgttctagcctcgatgtggacggtccccctgactcccccaatgacccaataatggtatcagagccccggttcgacgaagggta 35580669  T
Q  101 cgaccgaggc 110  Q
     |||||||||    
T  35580668 tgaccgaggc 35580659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 962713 - 962818
Alignment:
Q  2 ctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgc 101  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||  |||||| |||||||||||||| |||| |||| |||||||||| |||||||||    
T  962713 ctcttgcttgtgtggttgttctagcctcgatgtggacggtctcccgaactcccc-catgatccaacagtagtattagag-cccggttcgatgaagggtgc 962810  T
Q  102 gaccgagg 109  Q
    ||| ||||    
T  962811 gactgagg 962818  T

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Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 319
Target Start/End: Original strand, 42514899 - 42515027
Alignment:
Q  188 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttg 287  Q
    ||||||||||||||| | ||||||||||||||| | || ||| |||| ||||||||||| ||||||| ||||||| ||||||| |||||||||||| |||    
T  42514899 cagtgtcggtccgtt-gcggagaaaccagcaacagcgatacaagcaa-gtaagagcttccgcttgagagggagcatgatgaatagatggactcacatttg 42514996  T
Q  288 agggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||||| || |||| |||||||||||    
T  42514997 agggggagtgtt-gtgtgcaggtgtgagttat 42515027  T

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Target: chr2; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 319
Target Start/End: Original strand, 7598488 - 7598624
Alignment:
Q  184 caagcagtgtc-ggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcac 282  Q
    ||||||||||| |||| ||||  |||||||||| |||||  || ||| ||||   ||||||||| |||||| |||| ||| ||||||| |||||||||||    
T  7598488 caagcagtgtcaggtctgtttacggagaaaccaacaacgacgatacaagcaagtaaagagcttccgcttgaaggggggcatgatgaatagatggactcac 7598587  T
Q  283 acttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  7598588 acttgagagggagtgttggtgtgcaagtgtgagttat 7598624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 40679852 - 40679772
Alignment:
Q  238 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||    
T  40679852 aagagcttccgcttgagggggagcatgatgaatagatggactcacacttgagggggagtgtt-gtgtgcaaatgtgagttat 40679772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 40734002 - 40734149
Alignment:
Q  7 gcttgtgcggttgttctagcctcgatgtggacggtcccccgcg-ctcccct-ca-tgatccaacagtggtatcagagccccggttcgacgaagggtgcga 103  Q
    ||||||| |||||||| || ||||||||||||||||||||  | ||||||| || ||| ||| ||||||||||||||||||| |||| | |||||| |||    
T  40734002 gcttgtgtggttgttcaagtctcgatgtggacggtcccccttgactccccttcagtgaacca-cagtggtatcagagccccg-ttcgtcaaagggtacga 40734099  T
Q  104 ccgaggccgccggttagtt-gcgcagaaagcagcaacgacggtacaagca 152  Q
    ||||||| ||||||| ||| ||||||||||||||||| ||||||||||||    
T  40734100 ccgaggcagccggttcgtttgcgcagaaagcagcaacaacggtacaagca 40734149  T

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Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5542669 - 5542602
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||    
T  5542669 tctcttgcttgtgcggttgttcaagtctcgatgtggacggtcccccgagctccccccatgatccaaca 5542602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 14745524 - 14745437
Alignment:
Q  232 caaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||||| |||||| ||||||||| ||||||| |||| ||||| |||||||||| ||||||||||||||| ||||||||||    
T  14745524 caaagtaagagcttccgcttgaagggggagcatgatgaatagatgtactcaaacttgagggg-agtgttggtttgcaactgtgagttat 14745437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 38796487 - 38796361
Alignment:
Q  196 gtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaatt-gatggactcacacttgaggggg 293  Q
    ||||||||| ||||||||||||||||  || ||| |||| |||||| |||| |||||| ||||||||| ||||||   ||||||||||||||||||||||    
T  38796487 gtccgtttgcggagaaaccagcaacgacgatacaagcaa-gtaagatcttccgcttgaagggggagcatgatgaaaaagatggactcacacttgaggggg 38796389  T
Q  294 agtgttg--gtttgcaagtgtgagttat 319  Q
    |||||||  || ||||||||||||||||    
T  38796388 agtgttgttgtgtgcaagtgtgagttat 38796361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36178215 - 36178148
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||    
T  36178215 tctcttgcttgtgtggttgttatagcctcgatgtagacggtcccccgcgctcccctcgtgacccaaca 36178148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 319
Target Start/End: Original strand, 37106156 - 37106203
Alignment:
Q  272 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37106156 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 37106203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 40733813 - 40733876
Alignment:
Q  237 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgtt 299  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  40733813 taagagcttccgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgtt 40733876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 319
Target Start/End: Complemental strand, 28531583 - 28531457
Alignment:
Q  190 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatggactcacacttgag 289  Q
    ||||| |||||||| |||||||| || |||||  || ||| |||| |||| ||||||  ||||| ||| |||| |||||| |||||||||||||||||||    
T  28531583 gtgtcagtccgtttatggagaaagcaacaacgacgatacaagcaa-gtaatagcttccacttgaaggg-agcatgatgaactgatggactcacacttgag 28531486  T
Q  290 ggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||| || ||||||||||||||||    
T  28531485 ggggagtgtt-gtgtgcaagtgtgagttat 28531457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 36178460 - 36178412
Alignment:
Q  271 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36178460 tgatggactcacacttgagggggactgttggtttgcaagtgtgagttat 36178412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 3672823 - 3672968
Alignment:
Q  9 ttgtgcggttgttctagcctcgatgtggacggtcccccgcgct-cccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 107  Q
    ||||| ||||||||||| ||||||||||||||| ||||  ||| |||||  ||| |||||  || |||||||||||| ||||||||||||||| || |||    
T  3672823 ttgtgtggttgttctagtctcgatgtggacggttcccctggctccccctagtgacccaacgctgttatcagagcccc-gttcgacgaagggtgtgatcga 3672921  T
Q  108 ggccgccggttag-ttgcgcagaaagcagcaacgacggtacaagcag 153  Q
    ||| ||||||  | ||||||||||||||||  || |||| |||||||    
T  3672922 ggcagccggtccgtttgcgcagaaagcagcggcggcggtgcaagcag 3672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 287
Target Start/End: Original strand, 23346489 - 23346594
Alignment:
Q  177 ggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttgagggggagcacgatgaattgatgg 276  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||| || ||||      ||||||||||||||||| |||| ||| ||||||| ||||     
T  23346489 ggcagtacaagcagtgtcggtctgtttgcggagaaaccagcaacggcgatacat-----ataagagcttctgcttgaaggggggcatgatgaatagatga 23346583  T
Q  277 actcacacttg 287  Q
    ||||| |||||    
T  23346584 actcatacttg 23346594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 41678593 - 41678512
Alignment:
Q  238 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||| |||||||| | |||||  |||||||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  41678593 aagagcttccgcttgaggagagagcattatgaattgatggactcacacttgaaggggagtgtt-gtgtgcaagtgtgagttat 41678512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 6421996 - 6422109
Alignment:
Q  184 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcac 282  Q
    |||| ||||||||| |||||| ||||||||||||||||   | ||| || |   || | |||| |||||| ||||||||| |||||||||||||||||||    
T  6421996 caagtagtgtcggttcgtttgcggagaaaccagcaacgacaatacaagctagtaaaaaacttccgcttgaagggggagcatgatgaattgatggactcac 6422095  T
Q  283 acttgagggggagt 296  Q
    ||||||||||||||    
T  6422096 acttgagggggagt 6422109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37106302 - 37106344
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 43  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  37106302 tctcttgcttgtgcgattgttctagcctcgatgtggacggtcc 37106344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6422224 - 6422269
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  6422224 tctcttgcttgtgtggttgttctagcctcgatgtggactgtccccc 6422269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6713091 - 6713160
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacag 69  Q
    |||||||||| || | |||||||||||||||||||||||||||||||  || |||||| |||||||||||    
T  6713091 tctcttgcttatgggattgttctagcctcgatgtggacggtcccccgaacttccctcactgatccaacag 6713160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41283519 - 41283462
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||  ||||||||||    
T  41283519 tctcttgtttgtgtggttgttctagccttgatgtggacggtcccccatgctcccctca 41283462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15880377 - 15880429
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcc 53  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||    
T  15880377 tctcttgcttgtgcggttgttttagcctcgatgtggacgttcctccgagctcc 15880429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 29676851 - 29676918
Alignment:
Q  254 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||||  || |||| |||||||||||    
T  29676851 gggggagcacgataaagtgatggactcacacttgagggggtgtgttgttgtgtgcaggtgtgagttat 29676918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 40734231 - 40734271
Alignment:
Q  259 agcacgatgaattgatggactcacacttgagggggagtgtt 299  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  40734231 agcacgatgaattgatggaatcacacttgagggggagtgtt 40734271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 30312912 - 30312983
Alignment:
Q  9 ttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 80  Q
    ||||||||||| ||| ||||  ||||||  ||||||||| ||||||||| ||| ||||||||||||||||||    
T  30312912 ttgtgcggttgctctggcctgaatgtgggtggtcccccgagctcccctcgtgacccaacagtggtatcagag 30312983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 30313110 - 30313165
Alignment:
Q  238 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggg 292  Q
    ||||||||| |||||||||| ||||| ||||||||| |||||||||||||||||||    
T  30313110 aagagcttccgcttgaggggtgagcatgatgaattgttggactcacacttgagggg 30313165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31899146 - 31899080
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaaca 68  Q
    ||||||||||||| |||| ||||| |||||||||| ||||| ||||  ||||||||||||||||||||    
T  31899146 tctcttgcttgtggggttcttctaacctcgatgtgaacggt-ccccaagctcccctcatgatccaaca 31899080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3673182 - 3673236
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    |||||| || ||| ||||||||||||||||||||||||||||||||  |||||||    
T  3673182 tctcttactagtgtggttgttctagcctcgatgtggacggtccccctggctcccc 3673236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 30323396 - 30323454
Alignment:
Q  238 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag 295  Q
    |||||| || |||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  30323396 aagagcatccgcttgagggatgagcatgatgaattgatggactcacacttgagggggag 30323454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36005924 - 36005870
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||||||||| |||||||||||||||||||||||| ||| | || |||||||    
T  36005924 tctcttgcttgtggggttgttctagcctcgatgtggacagtctctcgagctcccc 36005870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1770006 - 1770075
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagt 70  Q
    ||||||||||||| ||||||||||||||||||||| ||| ||| ||  |||||||  |||| ||||||||    
T  1770006 tctcttgcttgtgaggttgttctagcctcgatgtgaacgatcctcctagctcccccaatgacccaacagt 1770075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16590997 - 16591054
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca 58  Q
    |||||| |||||| ||||||||||||||| |||||||| ||| |||| ||||||||||    
T  16590997 tctcttacttgtggggttgttctagcctcaatgtggacagtctcccgagctcccctca 16591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 34481589 - 34481642
Alignment:
Q  248 gcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttg 300  Q
    |||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  34481589 gcttgaggcgggagcgtgatgaattgatggactcacacttgagggagagtgttg 34481642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15511539 - 15511495
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccc 45  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||    
T  15511539 tctcttgcttgtgtggttgttctagtctcgatgtggacgatcccc 15511495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 36785927 - 36785880
Alignment:
Q  63 ccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggcc 111  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||    
T  36785927 ccaacagtggtatcagagcccc-gttcgacgaagggtacgatcgaggcc 36785880  T

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Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33731762 - 33731804
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcc 43  Q
    |||||||||| |||||||||||||||||||||||  |||||||    
T  33731762 tctcttgcttatgcggttgttctagcctcgatgtaaacggtcc 33731804  T

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Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 40733472 - 40733510
Alignment:
Q  261 cacgatgaattgatggactcacacttgagggggagtgtt 299  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  40733472 cacgatgaattgatagactcacacttgaggggaagtgtt 40733510  T

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Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 33561658 - 33561594
Alignment:
Q  254 gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||  |||||||||||||||| | ||||||| ||||| |||| || ||||||||||||||||    
T  33561658 gggggagtgcgatgaattgatggacacgcacttgatggggaatgtt-gtgtgcaagtgtgagttat 33561594  T

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Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 33953994 - 33953914
Alignment:
Q  238 aagagcttctgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||  ||||||||||||||||||||||| |   |||||   ||||||||||||||| || ||||| ||||||||||    
T  33953994 aagagcttcctcttgagggggagcacgatgaattaacatactcaattttgagggggagtgtt-gtgtgcaaatgtgagttat 33953914  T

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Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 35580592 - 35580532
Alignment:
Q  257 ggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgag 315  Q
    |||||| ||||||| |||||||||||||||||||| ||||| ||  || ||||||||||||    
T  35580592 ggagcatgatgaatagatggactcacacttgagggagagtgctgttgtgtgcaagtgtgag 35580532  T

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Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40679673 - 40679632
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtc 42  Q
    |||||| |||||| ||||||||||| ||||||||||||||||    
T  40679673 tctcttacttgtggggttgttctagtctcgatgtggacggtc 40679632  T

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Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 40733698 - 40733777
Alignment:
Q  66 acagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcag 153  Q
    |||||||||||| |||||| ||||||| |||||| |||||||||| ||||||| |||       ||||||||||||| ||||||||||    
T  40733698 acagtggtatcaaagcccc-gttcgacaaagggtacgaccgaggcagccggttcgtt-------aagcagcaacgacagtacaagcag 40733777  T

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Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 6421632 - 6421679
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaac 220  Q
    |||||| |||| ||||| ||||||||||||||| |||||||||||||||    
T  6421632 gcaacgacagtacaagc-gtgtcggtccgtttgcggagaaaccagcaac 6421679  T

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Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 12911432 - 12911500
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccc 83  Q
    ||||||||||||| |||||||||| ||||  || ||||||||||| |  ||| |||| |||||||||||    
T  12911432 ggttgttctagccacgatgtggacagtccttcgagctcccctcataactcaatagtgatatcagagccc 12911500  T

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Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 30313298 - 30313370
Alignment:
Q  8 cttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagag 80  Q
    |||||| ||||| ||| |||| ||| | |||| ||||||| |||| |||| ||| ||||||||||||||||||    
T  30313298 cttgtgtggttgctctggcctggattttgacgatcccccgggctctcctcgtgacccaacagtggtatcagag 30313370  T

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Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 37895094 - 37894968
Alignment:
Q  40 gtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttagttgcgcagaaagcagcaac 139  Q
    ||||| || |||| |||||||| ||||||||||| ||||| || |  ||||||||||||| | ||| ||||  || ||  |||| ||||||||| | |||    
T  37895094 gtccctcgggctctcctcatgacccaacagtggtgtcagaacctcc-ttcgacgaagggtactaccaaggcaaccagtctgttgtgcagaaagc-gaaac 37894997  T
Q  140 gacggtacaagcagcaagtggctccttgt 168  Q
     ||||||||||||||||||| ||| ||||    
T  37894996 aacggtacaagcagcaagtgactcattgt 37894968  T

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Target: scaffold0702 (Bit Score: 74; Significance: 6e-34; HSPs: 3)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 168
Target Start/End: Complemental strand, 556 - 392
Alignment:
Q  3 tcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcg 102  Q
    ||||||||| | |||| |||||||||||||||||| ||||||||| ||| |||   ||| |||||||||||||||||||||||||||||||||||||||     
T  556 tcttgcttgagtggtttttctagcctcgatgtggaaggtcccccgagcttccccagtgacccaacagtggtatcagagccccggttcgacgaagggtgca 457  T
Q  103 accgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
    |||||||  | ||| | |||||| ||||||  |||||  | |||||||||||||||||||||||||    
T  456 accgaggtagtcgg-tcgttgcgaagaaagtcgcaacagcagtacaagcagcaagtggctccttgt 392  T

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Target: scaffold0702; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 367 - 285
Alignment:
Q  237 taagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    |||||||||| |||||| ||||||||| |||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  367 taagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttggtttgcaagtgtgagttat 285  T

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Target: scaffold0702; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 191 - 145
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccg 47  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||    
T  191 tctcttgcttgagtggttgttctagcctcgatgtggacggtcccccg 145  T

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Target: scaffold0078 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 5096 - 5262
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccctca-tgatccaacagtggtatcagagccccggttcgacgaagggt 99  Q
    ||||| |||| |||||||| ||||||||||||||||||  | |||    ||||||| | ||| |||||||||| |||| ||||||| ||||||||| |||    
T  5096 tctctcgcttatgcggttgctctagcctcgatgtggaccattcccttttctcccctaagtgacccaacagtggcatcacagccccg-ttcgacgaaaggt 5194  T
Q  100 gcgaccgaggccgccggttagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctccttgt 168  Q
     ||| |||||| || |||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5195 acgatcgaggcagctggtc-gttgcgcagaaagcagcaacggcggtacaagcagcaagtggctccttgt 5262  T

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Target: scaffold0078; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 5268 - 5372
Alignment:
Q  218 aacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtga 314  Q
    ||||| || ||| |||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||| |||| |||  || |||||||||||    
T  5268 aacggcgatacaggcaaagtaagagcttccgcttgaagggggagcacgatgaactgatggactcacacttgagggagagttttgttgtgtgcaagtgtga 5367  T
Q  315 gttat 319  Q
    |||||    
T  5368 gttat 5372  T

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Target: scaffold0391 (Bit Score: 56; Significance: 3e-23; HSPs: 6)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 319
Target Start/End: Complemental strand, 1398 - 1249
Alignment:
Q  172 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttg-agggggagcacgatgaat 270  Q
    |||||||| || |||| |||||||||||||||| ||||||||||||||||  || ||| || ||||||||||||| ||| | |||||||||| ||| ||     
T  1398 gcaacggcggtacaagtagtgtcggtccgtttgcggagaaaccagcaacgacgatacaagc-aagtaagagcttccgctcgaagggggagcatgatcaaa 1300  T
Q  271 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
     ||||||||||||||||||||||| |||||  || | ||||||||||||||    
T  1299 agatggactcacacttgagggggaatgttgttgtgtacaagtgtgagttat 1249  T

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Target: scaffold0391; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 1713 - 1591
Alignment:
Q  15 ggttgttctagcctcgatgtggacggtcccccgcgctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgcc 114  Q
    |||||||||||||||||||||| | |||||||  ||||||||| ||| |||||||||||||||||||| | ||||||| |||||| | |||||||| ||     
T  1713 ggttgttctagcctcgatgtgggcagtccccctagctcccctcgtgacccaacagtggtatcagagcctc-gttcgacaaagggtacaaccgaggcagct 1615  T
Q  115 ggttag-ttgcgcagaaagcagca 137  Q
    |||  | |||||||||||||||||    
T  1614 ggtccgtttgcgcagaaagcagca 1591  T

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Target: scaffold0391; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 3254 - 3128
Alignment:
Q  196 gtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacacttgaggggga 294  Q
    ||||||||| |||||| ||| |||||| || |||    ||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  3254 gtccgtttgcggagaacccaacaacggcgatacaaatcaagtaagagcttccgcttgaagggggagcatgatgagttgatggactcacacttgaggggga 3155  T
Q  295 gtgttg--gtttgcaagtgtgagttat 319  Q
    ||||||  || |||| |||||||||||    
T  3154 gtgttgttgtgtgcaggtgtgagttat 3128  T

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Target: scaffold0391; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 1465 - 1383
Alignment:
Q  69 gtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggttag-ttgcgcagaaagcagcaacgacggtacaag 150  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||  | ||| |||||||||||||||| |||||||||    
T  1465 gtggtatcagagccccggttcgacgaagggtatgaccgaggcagccggtccgtttgtgcagaaagcagcaacggcggtacaag 1383  T

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Target: scaffold0391; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 298
Target Start/End: Complemental strand, 1575 - 1464
Alignment:
Q  189 agtgtcggtccgtttgtggagaaaccagcaacg--gagacacatgcaaagtaagagcttctgcttga-gggggagcacgatgaattgatggactcacact 285  Q
    ||||| |||||||||| ||||||||||||||||  | || ||| |||| |||| |||||  ||| || ||||||||| ||||||| ||| ||||||||||    
T  1575 agtgtaggtccgtttgcggagaaaccagcaacgttgtgatacaagcaa-gtaaaagctttcgctggaagggggagcatgatgaatcgattgactcacact 1477  T
Q  286 tgagggggagtgt 298  Q
    |||||||||||||    
T  1476 tgagggggagtgt 1464  T

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Target: scaffold0391; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1150 - 1096
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtcccccgcgctcccc 55  Q
    ||||||| || || ||||||||||||||||||||||||||| ||||  |||||||    
T  1150 tctcttgtttatgtggttgttctagcctcgatgtggacggttccccaagctcccc 1096  T

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Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 319
Target Start/End: Complemental strand, 17663 - 17599
Alignment:
Q  257 ggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttat 319  Q
    |||||| ||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||    
T  17663 ggagcatgatgaatagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttat 17599  T

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Target: scaffold0113 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 39771 - 39853
Alignment:
Q  238 aagagcttctgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttat 319  Q
    ||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||| |  | || | ||||||||||||||    
T  39771 aagagcttccgcttgaggggtgagcatgatgaattgatgaactcacacttgagggggaattgttgtgttcaagtgtgagttat 39853  T

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Target: scaffold0113; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 39616 - 39672
Alignment:
Q  49 gctcccctcatgatccaacagtggtatcagagccccggttcgacgaagggtgcgacc 105  Q
    ||||||||  ||| ||||||||||||||||||||  ||||||||||||||| |||||    
T  39616 gctcccctagtgacccaacagtggtatcagagccgaggttcgacgaagggttcgacc 39672  T

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Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47474 - 47519
Alignment:
Q  1 tctcttgcttgtgcggttgttctagcctcgatgtggacggtccccc 46  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  47474 tctcttgcttgcgcggttgttctaacctcgatgtggacggtccccc 47519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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