View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16682_low_4 (Length: 467)

Name: NF16682_low_4
Description: NF16682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16682_low_4
NF16682_low_4
[»] chr7 (42 HSPs)
chr7 (244-421)||(39521796-39521973)
chr7 (28-145)||(17834422-17834539)
chr7 (38-144)||(45256923-45257029)
chr7 (28-146)||(10516953-10517071)
chr7 (28-113)||(7975630-7975716)
chr7 (28-109)||(13644392-13644473)
chr7 (28-109)||(38555434-38555515)
chr7 (30-110)||(5541566-5541646)
chr7 (28-109)||(11886905-11886986)
chr7 (28-85)||(17838645-17838702)
chr7 (30-110)||(19804512-19804592)
chr7 (28-109)||(29097881-29097959)
chr7 (28-118)||(17840911-17841001)
chr7 (28-109)||(30846816-30846897)
chr7 (77-142)||(31513053-31513118)
chr7 (65-110)||(37345161-37345206)
chr7 (26-118)||(43619666-43619759)
chr7 (30-86)||(48403365-48403422)
chr7 (28-118)||(46907501-46907588)
chr7 (49-109)||(47521388-47521448)
chr7 (38-109)||(7974910-7974981)
chr7 (28-83)||(9494827-9494882)
chr7 (28-118)||(10098138-10098229)
chr7 (28-83)||(12210611-12210666)
chr7 (30-92)||(17465736-17465799)
chr7 (30-92)||(17587415-17587478)
chr7 (27-85)||(20564193-20564252)
chr7 (28-145)||(26833495-26833609)
chr7 (29-118)||(45763340-45763431)
chr7 (32-83)||(46738799-46738850)
chr7 (28-118)||(7031-7121)
chr7 (28-145)||(15074249-15074367)
chr7 (28-113)||(40928948-40929034)
chr7 (28-118)||(46908494-46908584)
chr7 (28-92)||(18105360-18105425)
chr7 (29-81)||(14101447-14101499)
chr7 (29-81)||(14411464-14411516)
chr7 (27-83)||(27453614-27453670)
chr7 (29-109)||(30845922-30846002)
chr7 (28-118)||(42582077-42582164)
chr7 (66-118)||(42795139-42795191)
chr7 (30-145)||(46740634-46740750)
[»] chr2 (53 HSPs)
chr2 (28-145)||(28419342-28419459)
chr2 (28-145)||(41273269-41273386)
chr2 (28-151)||(23347349-23347472)
chr2 (27-145)||(7184990-7185108)
chr2 (30-118)||(20937859-20937948)
chr2 (28-113)||(39947566-39947651)
chr2 (28-145)||(43257685-43257802)
chr2 (28-109)||(43258754-43258835)
chr2 (28-146)||(23346714-23346832)
chr2 (28-109)||(29406943-29407024)
chr2 (28-109)||(40221151-40221232)
chr2 (30-110)||(36652876-36652956)
chr2 (27-86)||(43619162-43619222)
chr2 (31-110)||(6637504-6637583)
chr2 (32-110)||(29401630-29401708)
chr2 (28-118)||(30803039-30803129)
chr2 (27-109)||(43976823-43976905)
chr2 (27-80)||(24607588-24607641)
chr2 (30-146)||(30496972-30497089)
chr2 (31-147)||(42505786-42505903)
chr2 (28-92)||(12252503-12252567)
chr2 (29-118)||(213474-213565)
chr2 (28-83)||(7189972-7190027)
chr2 (29-118)||(10624487-10624578)
chr2 (59-118)||(39489145-39489204)
chr2 (29-111)||(43312700-43312783)
chr2 (29-118)||(26543265-26543355)
chr2 (59-109)||(29601197-29601247)
chr2 (28-110)||(36510877-36510959)
chr2 (30-86)||(39793956-39794013)
chr2 (30-86)||(39800675-39800732)
chr2 (29-109)||(14002490-14002570)
chr2 (66-122)||(20951105-20951161)
chr2 (28-92)||(29407908-29407972)
chr2 (69-109)||(37294312-37294352)
chr2 (28-145)||(2528607-2528721)
chr2 (32-83)||(3943217-3943268)
chr2 (58-109)||(16544342-16544393)
chr2 (29-83)||(18003294-18003349)
chr2 (28-118)||(22003422-22003513)
chr2 (28-83)||(26544010-26544065)
chr2 (28-83)||(33222613-33222668)
chr2 (60-118)||(3940783-3940841)
chr2 (59-109)||(33416100-33416150)
chr2 (29-83)||(37322133-37322187)
chr2 (60-118)||(43978497-43978555)
chr2 (65-110)||(10334406-10334451)
chr2 (65-142)||(33002364-33002441)
chr2 (27-83)||(39798439-39798496)
chr2 (59-147)||(3085969-3086057)
chr2 (30-113)||(5351930-5352014)
chr2 (30-145)||(15831061-15831177)
chr2 (26-86)||(28342517-28342577)
[»] chr6 (19 HSPs)
chr6 (30-145)||(3501086-3501201)
chr6 (28-86)||(9048069-9048127)
chr6 (28-122)||(26351117-26351211)
chr6 (28-145)||(26349910-26350026)
chr6 (30-145)||(26422915-26423030)
chr6 (28-86)||(9049105-9049163)
chr6 (28-109)||(15888821-15888901)
chr6 (61-141)||(24719880-24719960)
chr6 (28-146)||(32223534-32223652)
chr6 (28-145)||(14012396-14012513)
chr6 (28-118)||(2109479-2109569)
chr6 (28-118)||(25554667-25554757)
chr6 (28-86)||(32222523-32222581)
chr6 (28-118)||(13382590-13382681)
chr6 (28-85)||(22305102-22305160)
chr6 (28-86)||(29076344-29076402)
chr6 (28-86)||(29109877-29109935)
chr6 (28-86)||(29111317-29111375)
chr6 (28-85)||(32395904-32395961)
[»] chr8 (65 HSPs)
chr8 (28-145)||(22550886-22551003)
chr8 (31-145)||(45409806-45409920)
chr8 (33-146)||(34371872-34371985)
chr8 (28-146)||(10749695-10749813)
chr8 (37-147)||(20854550-20854660)
chr8 (28-109)||(40740877-40740958)
chr8 (30-113)||(22547436-22547519)
chr8 (28-147)||(44727526-44727644)
chr8 (28-145)||(34503083-34503197)
chr8 (28-118)||(28617530-28617620)
chr8 (32-109)||(7120871-7120948)
chr8 (28-109)||(31745153-31745234)
chr8 (29-109)||(16939351-16939431)
chr8 (26-110)||(39252021-39252105)
chr8 (29-118)||(7340027-7340118)
chr8 (36-110)||(39831126-39831200)
chr8 (28-118)||(30305564-30305656)
chr8 (27-118)||(43211493-43211585)
chr8 (33-109)||(44726476-44726552)
chr8 (28-147)||(5533046-5533165)
chr8 (28-110)||(36127342-36127424)
chr8 (31-145)||(40075067-40075181)
chr8 (28-118)||(43363281-43363371)
chr8 (28-114)||(44933825-44933911)
chr8 (40-122)||(45410952-45411034)
chr8 (65-118)||(5532423-5532476)
chr8 (30-118)||(22510509-22510598)
chr8 (30-86)||(26659447-26659504)
chr8 (28-109)||(28694049-28694130)
chr8 (101-146)||(34234516-34234561)
chr8 (28-118)||(914682-914769)
chr8 (28-84)||(13783129-13783185)
chr8 (30-110)||(20859627-20859707)
chr8 (28-80)||(21406267-21406319)
chr8 (28-80)||(21800759-21800811)
chr8 (28-118)||(28618460-28618547)
chr8 (28-80)||(38135630-38135682)
chr8 (28-118)||(184573-184664)
chr8 (28-118)||(8419365-8419456)
chr8 (28-118)||(15030845-15030936)
chr8 (28-118)||(22014456-22014547)
chr8 (28-86)||(23022308-23022367)
chr8 (29-118)||(32378943-32379034)
chr8 (29-118)||(32432898-32432989)
chr8 (28-79)||(34366912-34366963)
chr8 (28-118)||(36677950-36678041)
chr8 (32-147)||(39491040-39491155)
chr8 (28-79)||(39601705-39601756)
chr8 (58-109)||(41472065-41472116)
chr8 (28-118)||(45066382-45066473)
chr8 (60-146)||(25588-25674)
chr8 (28-118)||(2335169-2335259)
chr8 (28-118)||(27501562-27501652)
chr8 (28-109)||(13782206-13782287)
chr8 (28-147)||(27502589-27502705)
chr8 (28-113)||(32584019-32584104)
chr8 (28-105)||(34892830-34892907)
chr8 (32-109)||(44885686-44885763)
chr8 (28-83)||(8423810-8423866)
chr8 (75-147)||(28694487-28694559)
chr8 (28-118)||(32585014-32585101)
chr8 (28-84)||(36595967-36596023)
chr8 (49-105)||(37656847-37656903)
chr8 (28-92)||(38604269-38604333)
chr8 (31-118)||(42485562-42485650)
[»] chr4 (64 HSPs)
chr4 (33-146)||(3186090-3186203)
chr4 (28-146)||(28235582-28235700)
chr4 (33-142)||(3183919-3184028)
chr4 (28-144)||(16473701-16473817)
chr4 (39-146)||(34528098-34528205)
chr4 (30-105)||(44680097-44680172)
chr4 (28-144)||(56565693-56565809)
chr4 (27-110)||(40061181-40061264)
chr4 (28-109)||(37856765-37856846)
chr4 (28-109)||(43176649-43176730)
chr4 (30-122)||(34530792-34530884)
chr4 (27-113)||(31242182-31242269)
chr4 (28-145)||(38368166-38368280)
chr4 (28-145)||(46165680-46165794)
chr4 (33-134)||(51494875-51494976)
chr4 (28-147)||(55587291-55587407)
chr4 (28-118)||(55588308-55588395)
chr4 (28-118)||(26792265-26792356)
chr4 (28-118)||(39773365-39773456)
chr4 (28-145)||(16984182-16984300)
chr4 (28-118)||(38369203-38369293)
chr4 (28-118)||(40833631-40833721)
chr4 (27-145)||(44794994-44795112)
chr4 (28-113)||(28234383-28234468)
chr4 (28-109)||(48806456-48806537)
chr4 (28-145)||(51037489-51037606)
chr4 (30-145)||(6181814-6181930)
chr4 (29-148)||(7485683-7485802)
chr4 (30-109)||(8111438-8111517)
chr4 (31-110)||(9013893-9013972)
chr4 (32-146)||(16983455-16983570)
chr4 (28-118)||(49090408-49090499)
chr4 (28-113)||(49566470-49566557)
chr4 (30-147)||(13182121-13182239)
chr4 (28-110)||(14200531-14200613)
chr4 (28-118)||(21022909-21022999)
chr4 (28-118)||(23220640-23220730)
chr4 (28-86)||(28081452-28081510)
chr4 (30-118)||(13173195-13173284)
chr4 (30-86)||(31421699-31421756)
chr4 (29-98)||(37855841-37855910)
chr4 (33-146)||(50196936-50197049)
chr4 (28-85)||(50447003-50447060)
chr4 (28-118)||(23221691-23221778)
chr4 (30-110)||(50020087-50020167)
chr4 (28-83)||(6189227-6189282)
chr4 (32-83)||(18884529-18884580)
chr4 (59-110)||(40061071-40061122)
chr4 (28-83)||(50905155-50905210)
chr4 (28-118)||(54634036-54634127)
chr4 (28-109)||(20208481-20208562)
chr4 (7-45)||(26932645-26932683)
chr4 (28-113)||(30726762-30726848)
chr4 (28-121)||(37563301-37563395)
chr4 (95-145)||(37880655-37880705)
chr4 (27-81)||(44674163-44674217)
chr4 (28-85)||(55793914-55793972)
chr4 (28-109)||(27872350-27872431)
chr4 (28-109)||(48807407-48807488)
chr4 (65-109)||(11566860-11566904)
chr4 (28-118)||(14201551-14201638)
chr4 (28-92)||(46254469-46254533)
chr4 (30-110)||(50023570-50023650)
chr4 (30-110)||(50030688-50030768)
[»] chr1 (50 HSPs)
chr1 (28-145)||(18609916-18610033)
chr1 (28-146)||(21699818-21699936)
chr1 (33-144)||(97949-98060)
chr1 (28-148)||(22524058-22524178)
chr1 (27-145)||(14985273-14985391)
chr1 (30-121)||(22397778-22397870)
chr1 (29-118)||(2365196-2365286)
chr1 (30-148)||(21140957-21141075)
chr1 (28-145)||(94344-94461)
chr1 (28-118)||(586626-586716)
chr1 (31-109)||(4208367-4208445)
chr1 (28-86)||(29424374-29424432)
chr1 (28-122)||(45977719-45977813)
chr1 (28-145)||(9618656-9618770)
chr1 (66-145)||(31779963-31780042)
chr1 (28-147)||(46217339-46217458)
chr1 (28-110)||(30194391-30194473)
chr1 (28-147)||(31783736-31783857)
chr1 (33-106)||(50343994-50344067)
chr1 (28-84)||(19161888-19161944)
chr1 (28-80)||(46044747-46044799)
chr1 (29-118)||(3983047-3983138)
chr1 (64-111)||(22528655-22528702)
chr1 (28-83)||(29438041-29438096)
chr1 (29-118)||(31945883-31945974)
chr1 (28-86)||(29425357-29425415)
chr1 (28-118)||(585616-585703)
chr1 (29-109)||(5329094-5329174)
chr1 (30-113)||(13629370-13629454)
chr1 (30-145)||(19155949-19156065)
chr1 (33-109)||(48228328-48228404)
chr1 (30-146)||(49426647-49426763)
chr1 (28-118)||(3732374-3732465)
chr1 (28-86)||(26875686-26875745)
chr1 (28-83)||(29765550-29765605)
chr1 (31-145)||(30889995-30890110)
chr1 (28-109)||(37992571-37992649)
chr1 (31-110)||(38119551-38119630)
chr1 (29-118)||(38776148-38776239)
chr1 (28-83)||(51271612-51271667)
chr1 (28-85)||(13636143-13636201)
chr1 (28-118)||(19914428-19914518)
chr1 (60-118)||(19924716-19924774)
chr1 (38-99)||(42572788-42572849)
chr1 (30-83)||(47505908-47505961)
chr1 (28-85)||(49429156-49429213)
chr1 (28-92)||(50036835-50036900)
chr1 (28-80)||(3941171-3941223)
chr1 (28-86)||(19915339-19915394)
chr1 (65-145)||(27650049-27650129)
[»] chr3 (67 HSPs)
chr3 (28-145)||(4331841-4331958)
chr3 (28-146)||(42165097-42165215)
chr3 (30-146)||(52391416-52391531)
chr3 (28-145)||(8475761-8475878)
chr3 (28-146)||(42166431-42166549)
chr3 (28-145)||(4015150-4015267)
chr3 (37-145)||(2274946-2275054)
chr3 (28-109)||(7941081-7941162)
chr3 (28-145)||(14043919-14044036)
chr3 (33-145)||(52387719-52387831)
chr3 (30-147)||(17561692-17561809)
chr3 (38-113)||(4008354-4008429)
chr3 (32-107)||(45076275-45076350)
chr3 (28-118)||(27739588-27739678)
chr3 (27-118)||(3975693-3975785)
chr3 (33-105)||(16611075-16611147)
chr3 (30-110)||(16861099-16861179)
chr3 (33-105)||(22048106-22048178)
chr3 (28-107)||(2062359-2062438)
chr3 (66-109)||(34645533-34645576)
chr3 (60-145)||(32200245-32200330)
chr3 (28-105)||(32593133-32593210)
chr3 (30-110)||(41612338-41612418)
chr3 (28-83)||(19440253-19440308)
chr3 (28-118)||(34045369-34045460)
chr3 (31-146)||(48566422-48566537)
chr3 (28-83)||(55385134-55385189)
chr3 (28-118)||(11249545-11249635)
chr3 (28-118)||(12897786-12897876)
chr3 (28-118)||(28817022-28817112)
chr3 (29-113)||(30947675-30947761)
chr3 (28-118)||(34543157-34543247)
chr3 (33-118)||(42900138-42900224)
chr3 (28-118)||(50998701-50998791)
chr3 (28-109)||(1294098-1294179)
chr3 (38-118)||(3493550-3493631)
chr3 (38-118)||(3497244-3497325)
chr3 (30-113)||(16444574-16444658)
chr3 (27-83)||(16647167-16647223)
chr3 (49-109)||(20485578-20485638)
chr3 (32-150)||(26245265-26245380)
chr3 (30-113)||(31951220-31951304)
chr3 (28-86)||(1293370-1293429)
chr3 (28-118)||(1835111-1835202)
chr3 (28-118)||(2645417-2645508)
chr3 (29-83)||(3948725-3948780)
chr3 (28-109)||(27738579-27738657)
chr3 (28-83)||(41802995-41803050)
chr3 (28-83)||(43478851-43478906)
chr3 (60-147)||(46388890-46388977)
chr3 (31-85)||(2271337-2271391)
chr3 (28-85)||(2647720-2647778)
chr3 (95-145)||(14403059-14403109)
chr3 (28-86)||(19842498-19842556)
chr3 (28-145)||(29008820-29008938)
chr3 (28-104)||(34542132-34542205)
chr3 (28-85)||(4004824-4004881)
chr3 (30-86)||(42904205-42904262)
chr3 (73-110)||(44523393-44523430)
chr3 (60-113)||(46702079-46702132)
chr3 (30-86)||(50481406-50481463)
chr3 (28-92)||(6143659-6143723)
chr3 (28-92)||(10658811-10658875)
chr3 (28-118)||(12898711-12898798)
chr3 (95-147)||(14398467-14398519)
chr3 (65-145)||(16851061-16851141)
chr3 (28-83)||(43476188-43476244)
[»] chr5 (32 HSPs)
chr5 (28-147)||(42912899-42913018)
chr5 (30-147)||(30705069-30705187)
chr5 (29-146)||(27673674-27673792)
chr5 (27-145)||(14683-14801)
chr5 (30-110)||(38408490-38408570)
chr5 (28-118)||(13837685-13837776)
chr5 (30-146)||(11027028-11027145)
chr5 (28-109)||(13838445-13838526)
chr5 (65-145)||(8680301-8680381)
chr5 (30-109)||(41623071-41623150)
chr5 (28-118)||(3891445-3891535)
chr5 (30-118)||(11033485-11033574)
chr5 (28-92)||(8539537-8539601)
chr5 (29-83)||(20744015-20744069)
chr5 (28-86)||(30192486-30192544)
chr5 (28-85)||(18512673-18512730)
chr5 (60-145)||(28241853-28241938)
chr5 (28-92)||(2170576-2170640)
chr5 (30-110)||(5200379-5200459)
chr5 (28-83)||(38855732-38855788)
chr5 (28-113)||(3892461-3892543)
chr5 (28-79)||(7757326-7757377)
chr5 (28-83)||(11348496-11348551)
chr5 (28-79)||(43094597-43094648)
chr5 (95-145)||(28388608-28388658)
chr5 (31-109)||(35564232-35564310)
chr5 (60-118)||(38853440-38853498)
chr5 (27-81)||(42942471-42942525)
chr5 (27-83)||(11029024-11029081)
chr5 (33-110)||(38971649-38971726)
chr5 (28-118)||(14279810-14279902)
chr5 (27-83)||(42937189-42937245)
[»] scaffold0180 (1 HSPs)
scaffold0180 (28-113)||(15643-15728)
[»] scaffold0011 (2 HSPs)
scaffold0011 (28-143)||(236281-236396)
scaffold0011 (66-145)||(235867-235946)
[»] scaffold0494 (2 HSPs)
scaffold0494 (30-118)||(11476-11565)
scaffold0494 (28-83)||(5327-5383)
[»] scaffold0199 (2 HSPs)
scaffold0199 (31-110)||(10622-10701)
scaffold0199 (28-85)||(12409-12466)
[»] scaffold0504 (1 HSPs)
scaffold0504 (28-113)||(12349-12434)
[»] scaffold0634 (1 HSPs)
scaffold0634 (28-110)||(7387-7470)
[»] scaffold0101 (1 HSPs)
scaffold0101 (31-118)||(41080-41168)
[»] scaffold1379 (1 HSPs)
scaffold1379 (28-83)||(455-510)
[»] scaffold0016 (1 HSPs)
scaffold0016 (59-118)||(69273-69332)
[»] scaffold0283 (1 HSPs)
scaffold0283 (32-109)||(1638-1715)
[»] scaffold0340 (1 HSPs)
scaffold0340 (95-147)||(19161-19213)


Alignment Details
Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 244 - 421
Target Start/End: Original strand, 39521796 - 39521973
Alignment:
Q  244 aaaaatgctagggtcacactctttt-aagacacacaatgatgaccagccctaaacaacattttattttactttcttataatataagtgcaactgctctcc 342  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  39521796 aaaaatgctagggtcagactctttttaagacacccaatgatgaccagccctaa-caacattttattttactttcttataatttaagtgcaactgctctcc 39521894  T
Q  343 gtcccaaaatctctatggatcttttcattctcaaatcctctttccccatcttctcccctttctcattcttttaccgccg 421  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  39521895 gtccgaaaatctctatggatcttttcattctcaaatcctcttttcccatcttcttccctttctcattcttttaccgccg 39521973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 17834539 - 17834422
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||   |||| ||||||||||||| ||||||||  |||    
T  17834539 tttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaagggcattttcataaattactcgtgtggcacagccttatgtaat 17834440  T
Q  128 gtataaacaacaattctc 145  Q
    || |||||| ||||||||    
T  17834439 gtgtaaacatcaattctc 17834422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 45257029 - 45256923
Alignment:
Q  38 agttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaa 137  Q
    ||||| |||| ||||||||| |||||||||| || ||||||||||||||| ||||||||||| ||||| ||||||| || ||||| |||||| ||||||     
T  45257029 agttagctgccgccggtttactaaaacttcgacaattaactgccgaaggacatttaggtaaattactcatgtggcacagtcttatcaaatgtgtaaacag 45256930  T
Q  138 caattct 144  Q
    |||||||    
T  45256929 caattct 45256923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 10517071 - 10516953
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||  |||||||||||||||||||| |||||||||| |||||||||||| ||| | ||||  ||||| ||||||||||||| ||||  |  ||||    
T  10517071 tttcctcgacagttaactgctgccggtttactaaaacttcgacagttaactgccaaagaacattttcgtaaagtactcgtgtggcacagccaaaccaaat 10516972  T
Q  128 gtataaacaacaattctct 146  Q
    | ||||||| |||||||||    
T  10516971 gcataaacagcaattctct 10516953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 7975630 - 7975716
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||| |||||||||| ||||||||| ||||| ||||||||||| |||||||||||| ||||  ||||| |||||||||||||    
T  7975630 tttcctcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaaggacattttcgtaaagtactcgtgtggca 7975716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 13644473 - 13644392
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| | |||||||| |||||||  |||||| |||||||||||||||||| ||||||||| |||||| |||||||||    
T  13644473 tttcctcggcatttaactgcagccggttctttaaaatttcggcagttaactgccgtaggatatttgggtaaattactcgtgt 13644392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 38555434 - 38555515
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| || ||||  |||||| ||||||||||||||||||||||||||||  ||||| |||||||||    
T  38555434 tttcctcggcagttaactgcagctggttctttaaaatttcggcagttaactgccgaaggatatttgagtaaattactcgtgt 38555515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 5541566 - 5541646
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||| |||||||||| ||||||||  |||||||| | |||||||||||| ||||  ||||||||||| ||||||||||    
T  5541566 tcctcgggagttaactgccgccggttttctaaaactttgacagttaactgccaaagggcatttaggtaaattactcgtgtg 5541646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 11886905 - 11886986
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||| | |||||||||| |||||||  |||| | |||||||||||| ||| ||||||||||| |||||| |||||||||    
T  11886905 tttcctcagcagttaactgcagccggttctttaagatttcggcagttaattgctgaaggatatttgggtaaattactcgtgt 11886986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 17838702 - 17838645
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaag 85  Q
    |||||||||||||| ||||| ||||| ||  |||||||||||||||||||||||||||    
T  17838702 tttcctcggtagtttactgcagccggatttctaaaacttcggcagttaactgccgaag 17838645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 19804512 - 19804592
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||| |||||||||| ||||||||    |||||||||||||||||| |||| ||  ||||||||||| ||||||||||    
T  19804512 tcctcggcagttaactgcagccggtttccacaaacttcggcagttaactaccgaggggcatttaggtaaattactcgtgtg 19804592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 29097881 - 29097959
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||||||||||||||| |||||||   |||   ||||||||||||||||||| |||||||| | |||| |||||||||    
T  29097881 tttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccgagggatatttggataaattactcgtgt 29097959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 17840911 - 17841001
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| | ||| ||  ||||||||||||||||||||||||| | | ||||  ||||  ||||||||||||| ||||    
T  17840911 tttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccgatgaacatttgagtaatttactcgtgtggcacagcc 17841001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 30846816 - 30846897
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| |||||||  |||||| ||||||||||||||| ||| || |||||  ||||  |||||||||    
T  30846816 tttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaggggtatttgagtaatttactcgtgt 30846897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 31513053 - 31513118
Alignment:
Q  77 ctgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaatt 142  Q
    ||||||||||  |||||| |||||||||||| ||||| | |||||| |||||| ||||||||||||    
T  31513053 ctgccgaagggcatttagataaaatactcgtatggcacaaccttatcaaatgtgtaaacaacaatt 31513118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 37345161 - 37345206
Alignment:
Q  65 ttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||    
T  37345161 ttcgacagttaactgccgaaggacatttaggtaaattactcgtgtg 37345206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 43619759 - 43619666
Alignment:
Q  26 aatttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||| |||||||||| ||||||||  ||||| | |||| ||  |||||||||||||||||| ||||   ||||||||||||| ||||    
T  43619759 aatttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaaggatattttggtattttactcgtgtggcacagcc 43619666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 48403422 - 48403365
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaagg 86  Q
    ||||||||||||| |||| ||||||||  ||||| |||||||||||||||||||||||    
T  48403422 tcctcggtagttagctgccgccggtttgctaaaaacttcggcagttaactgccgaagg 48403365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 46907588 - 46907501
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  |||   ||||||||||||||||||||||  ||||  ||||  ||||||||||||| ||||    
T  46907588 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgagtaatttactcgtgtggcatagcc 46907501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 47521448 - 47521388
Alignment:
Q  49 gccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||  |||||||||||||||||||||||||  |  ||||||||||| |||||||||    
T  47521448 gccggttttctaaaacttcggcagttaactgccgagaggcatttaggtaaattactcgtgt 47521388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 7974981 - 7974910
Alignment:
Q  38 agttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||||| |||||||| || | | ||||||||||||||||||| || ||||| |||||  |||||||||    
T  7974981 agttaactgcagccggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgt 7974910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 9494827 - 9494882
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||||||    
T  9494827 tttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccga 9494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 10098138 - 10098229
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||  ||||  ||||  ||||||||||||| ||||    
T  10098138 tttcctcggcagttaactgcagccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcc 10098229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 12210611 - 12210666
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||||||||    
T  12210611 tttcctcggcagttaactgcggccgtatttctaaaacttcggcagttaactgccga 12210666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 17465736 - 17465799
Alignment:
Q  30 tcctcggtagttaactgctgccggttta-ttaaaacttcggcagttaactgccgaaggatattt 92  Q
    ||||||||||||| |||| ||||||||| | |||| |||| ||||||||||||||||| |||||    
T  17465736 tcctcggtagttagctgccgccggtttactaaaaatttcgacagttaactgccgaagggtattt 17465799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 17587478 - 17587415
Alignment:
Q  30 tcctcggtagttaactgctgccggttta-ttaaaacttcggcagttaactgccgaaggatattt 92  Q
    ||||||||||||| |||| ||||||||| | |||| |||| ||||||||||||||||| |||||    
T  17587478 tcctcggtagttagctgccgccggtttactaaaaatttcgacagttaactgccgaagggtattt 17587415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 20564252 - 20564193
Alignment:
Q  27 atttcctcggtagttaactgctgccgg-tttattaaaacttcggcagttaactgccgaag 85  Q
    |||||||||| |||||||||||||||| |||   |||| |||||||||||||||||||||    
T  20564252 atttcctcggcagttaactgctgccggatttgagaaaatttcggcagttaactgccgaag 20564193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 26833495 - 26833609
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||| ||||||||||||||| |||||||   |||   ||||||||||||||||||| ||  |||| | |||| |||| |||| ||| ||||||||  |||    
T  26833495 tttcttcggtagttaactgcagccggttctataa---ttcggcagttaactgccgatgggcatttcgataaattactagtgtagcacagccttatgtaat 26833591  T
Q  128 gtataaacaacaattctc 145  Q
    || | |||||||||||||    
T  26833592 gtgtcaacaacaattctc 26833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 45763431 - 45763340
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||  ||||||||  ||||| | |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  45763431 ttcctcggtagttaactgtcgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 45763340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 46738850 - 46738799
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||| |||||||||| ||||| ||  |||||||||||||||||||||||||    
T  46738850 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 46738799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 7121 - 7031
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||| ||||||||||||| ||  ||||  ||||  ||||||||||||| ||||    
T  7121 tttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagcc 7031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 15074249 - 15074367
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaa-aacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaa 126  Q
    ||||||||| |||||||||| ||||||||  ||| ||||||||||||| ||| |||||||  ||||  |||   ||||||||||||| |||| || || |    
T  15074249 tttcctcggcagttaactgccgccggtttcctaagaacttcggcagtttactaccgaagggcattttcgtattttactcgtgtggcacagccatactata 15074348  T
Q  127 tgtataaacaacaattctc 145  Q
    |||   |||||||||||||    
T  15074349 tgtgggaacaacaattctc 15074367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 40928948 - 40929034
Alignment:
Q  28 tttcctcggtagttaactgctgccggtt-tattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||| ||||||||||||||||||  |  ||||||||||||||| ||||||||| |  ||||  ||||| || ||||||||||    
T  40928948 tttcctcggcagttaactgctgccggttgcacaaaaacttcggcagtttactgccgaaaggcatttgagtaaattattcgtgtggca 40929034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 46908494 - 46908584
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  |||||||||| ||||||||||||||  | ||||||  |||  ||||||||||||| ||||    
T  46908494 tttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagaggtatttaaataatttactcgtgtggcacagcc 46908584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 18105425 - 18105360
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatattt 92  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||| ||||    
T  18105425 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaaggacattt 18105360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 14101499 - 14101447
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgcc 81  Q
    |||||||| ||||| |||| |||||||  |||||| |||||||||||||||||    
T  14101499 ttcctcggcagttagctgcagccggttctttaaaatttcggcagttaactgcc 14101447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 14411516 - 14411464
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgcc 81  Q
    |||||||| ||||| |||| |||||||  |||||| |||||||||||||||||    
T  14411516 ttcctcggcagttagctgcagccggttctttaaaatttcggcagttaactgcc 14411464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 27453614 - 27453670
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    |||||||||| |||||||||| ||||| || ||||  | ||||||||||||||||||    
T  27453614 atttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccga 27453670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 30846002 - 30845922
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||| |||||||||| |||||||  | |||| || ||||||||||| | |||| |||||| |||||| || ||||||    
T  30846002 ttcctcggcagttaactgcagccggttcttaaaaattttggcagttaacttctgaagaatatttgggtaaattattcgtgt 30845922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 42582164 - 42582077
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||  ||||||||  |||   ||||||||||||||||||| ||| ||||  ||||  ||||||||||||| ||||    
T  42582164 tttcctcggcagttaactgtagccggtttcataa---ttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcatagcc 42582077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 42795139 - 42795191
Alignment:
Q  66 tcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||||||| ||||||||  ||||  ||||||||||||| ||||    
T  42795139 tcggcagttaactgccgagggatatttgagtaatttactcgtgtggcacagcc 42795191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 46740750 - 46740634
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggat-atttaggtaaaatactcgtgtggcagagccttattaaatg 128  Q
    ||||| |||||||||||  |||| |||  ||||| |||| ||||||||||| || ||   ||||||||||| |||| ||||| || |||||||| |||||    
T  46740750 tcctcagtagttaactgtcgccgattttctaaaatttcgacagttaactgcagagggggcatttaggtaaattactagtgtgtcacagccttatcaaatg 46740651  T
Q  129 tataaacaacaattctc 145  Q
    |   |||||||||||||    
T  46740650 tgggaacaacaattctc 46740634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 28419459 - 28419342
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||| ||||    
T  28419459 tttcctcggtagttaactaccgccggtttactaaaacttcggcagttaactgccgaagggcatttaggtaaaatactcgtgtggcacagccttatcaaat 28419360  T
Q  128 gtataaacaacaattctc 145  Q
    || |||||| ||||||||    
T  28419359 gtgtaaacagcaattctc 28419342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 41273269 - 41273386
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||  ||||   |||| ||||||||||||| |||| |||  |||    
T  41273269 tttcctcggcagttaactgccgccgatttactaaaacttcggcagttaactgccgaagggcattttcataaagtactcgtgtggcacagccatatgtaat 41273368  T
Q  128 gtataaacaacaattctc 145  Q
    || |||||||||||||||    
T  41273369 gtgtaaacaacaattctc 41273386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 23347349 - 23347472
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||  |   | || |  ||||||||||||| |||||||| ||||    
T  23347349 tttcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcaaaaacgtcatttactcgtgtggcacagccttatcaaat 23347448  T
Q  128 gtataaacaacaattctcttcaat 151  Q
    || |||||| |||||||| |||||    
T  23347449 gtgtaaacagcaattctcctcaat 23347472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 7185108 - 7184990
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaa 126  Q
    |||||||||| |||| ||||  ||||||||| ||||| ||||||||||||||||||||||  ||||   |||| ||||||| ||||| ||||||||  ||    
T  7185108 atttcctcggcagtttactgtcgccggtttactaaaaattcggcagttaactgccgaagggcattttcataaagtactcgtttggcacagccttatgtaa 7185009  T
Q  127 tgtataaacaacaattctc 145  Q
    ||| |||||| ||||||||    
T  7185008 tgtgtaaacagcaattctc 7184990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 20937948 - 20937859
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||| | |||| ||||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||| ||||    
T  20937948 tcctcggtagtaagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagcc 20937859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 39947651 - 39947566
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||| |||||||||| ||||||||| |||||||||| ||||| ||| ||||||| |||||  ||||| |||||||||||||    
T  39947651 tttcctcggcagttaactgccgccggtttactaaaacttcgacagtttactaccgaagggtattttcgtaaagtactcgtgtggca 39947566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 43257802 - 43257685
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| ||||||||||||||||||| || |||||||| |||||||||||||||||| ||||  ||||| ||||  |||  |  ||| |||||||||    
T  43257802 tttcctcggcagttaactgctgccggttttttcaaacttcgacagttaactgccgaaggacattttcgtaaagtactaatgtttctcagctttattaaat 43257703  T
Q  128 gtataaacaacaattctc 145  Q
    || ||  |||||||||||    
T  43257702 gtgtattcaacaattctc 43257685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 43258754 - 43258835
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||| ||||||||||||||| |||||||| || ||||||||||||||||||||||||||| ||||  ||||| |||| ||||    
T  43258754 tttcttcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaaggacattttcgtaaagtactagtgt 43258835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 23346832 - 23346714
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||| || |||||||||| ||||| ||  ||||||||||||||||||||||||||||  |   | || |  ||||||||||||| | |||||| ||||    
T  23346832 tttccttggcagttaactgcagccggatttataaaacttcggcagttaactgccgaagggcaaaaacgtcatttactcgtgtggcacaaccttatcaaat 23346733  T
Q  128 gtataaacaacaattctct 146  Q
    || ||||||||||||||||    
T  23346732 gtgtaaacaacaattctct 23346714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 29407024 - 29406943
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||| ||| |||||||  |||||| |||||||||||||||||||||| ||| | |||||| |||||||||    
T  29407024 tttcctcggcagttaattgcagccggttctttaaaatttcggcagttaactgccgaagggtatctgggtaaattactcgtgt 29406943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 40221151 - 40221232
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||||||||||||||| |||||| | || | | ||||||||||||||||||| ||||||||| ||||  |||||||||    
T  40221151 tttcctcggtagttaactgcagccggtgtctttagaattcggcagttaactgccgagggatatttaagtaatttactcgtgt 40221232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 36652956 - 36652876
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||||| |||||||||||  |||||||  |||||||||| |||||||||||||| ||| ||||| ||||| ||||||||||    
T  36652956 tcctcgatagttaactgcatccggttttctaaaacttcgacagttaactgccgatggacatttaagtaaattactcgtgtg 36652876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 43619162 - 43619222
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaagg 86  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  43619162 atttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagg 43619222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 6637583 - 6637504
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||||||||||||| ||||||||    |||||||||||||||||| |||| |||  |||||||||| ||||||||||    
T  6637583 cctcggtagttaactgcagccggtttccacaaacttcggcagttaactaccgagggacgtttaggtaaattactcgtgtg 6637504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 29401630 - 29401708
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||| |||||||||| ||||||||  |||||||||| |||||||||||||| ||  ||||| ||||| ||||||||||    
T  29401630 ctcgggagttaactgccgccggttttctaaaacttcgacagttaactgccgaggggcatttaagtaaattactcgtgtg 29401708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 30803039 - 30803129
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||||||||||||||||| ||| ||||  ||||  ||||||||||||| ||||    
T  30803039 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagcc 30803129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 43976905 - 43976823
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||||| |||||||| | |||||||| |||||| ||||||||||||||||||| |   |||||||| || |||||||||    
T  43976905 atttcctcggcagttaactacagccggttttttaaaatttcggcagttaactgccgaggagcatttaggttaattactcgtgt 43976823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 24607588 - 24607641
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgc 80  Q
    |||||||||| |||||||||| |||||||| ||||| |||||||||||||||||    
T  24607588 atttcctcggcagttaactgcagccggttttttaaatcttcggcagttaactgc 24607641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 30496972 - 30497089
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatg 128  Q
    ||||||||||||  |||| ||||||| | | |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| |||| || || |||    
T  30496972 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatg 30497071  T
Q  129 tataaacaacaattctct 146  Q
    |   ||||||||||||||    
T  30497072 tgggaacaacaattctct 30497089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 42505786 - 42505903
Alignment:
Q  31 cctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgt 129  Q
    ||||||||||   |||| ||||||||| | ||||||||||||||||||||||||||| ||||| ||||   ||||||||||||| |||| || || ||||    
T  42505786 cctcggtagtatgctgccgccggtttactcaaaacttcggcagttaactgccgaagggtattttggtattttactcgtgtggcacagccatactatatgt 42505885  T
Q  130 ataaacaacaattctctt 147  Q
       |||| ||||||||||    
T  42505886 gggaacagcaattctctt 42505903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 12252503 - 12252567
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatattt 92  Q
    ||||||||| |||||||||| |||||||  |||||| |||| |||||||||||||||||| ||||    
T  12252503 tttcctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccgaaggacattt 12252567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 213474 - 213565
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||| ||||||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  213474 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 213565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 7189972 - 7190027
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| ||||| ||  |||||||||||||||||||||||||    
T  7189972 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 7190027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 10624487 - 10624578
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||| ||||||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  10624487 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 10624578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 39489204 - 39489145
Alignment:
Q  59 taaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||||||||||||||||| |||||  ||||  ||||||||||||| ||||    
T  39489204 taaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagcc 39489145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 43312783 - 43312700
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtgg 111  Q
    |||||||| |||||||||| || |||||| ||||| ||||||||||| |||||||||||  ||||  |||||||| ||||||||    
T  43312783 ttcctcggcagttaactgccgctggtttactaaaaacttcggcagtttactgccgaagggcattttcgtaaaatattcgtgtgg 43312700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 26543355 - 26543265
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||| || |||||||||| ||||||||| ||||| ||||| ||||| | |||||||||| ||||  ||||| ||||||||||||| ||||    
T  26543355 ttccttggcagttaactgccgccggtttactaaaaacttcgacagtttagtgccgaaggacattttcgtaaagtactcgtgtggcacagcc 26543265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 29601197 - 29601247
Alignment:
Q  59 taaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||||||||||||||||| | |||| |||||||||    
T  29601197 taaaacttcagcagttaactgccgaaggatatttggataaattactcgtgt 29601247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 36510877 - 36510959
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||||||||||||||||| || |||||  ||||  ||||||||||    
T  36510877 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtg 36510959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 39794013 - 39793956
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaagg 86  Q
    ||||||||||||  |||| ||||||||| | |||||||||||||||||||||||||||    
T  39794013 tcctcggtagtttgctgccgccggtttaatcaaaacttcggcagttaactgccgaagg 39793956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 39800675 - 39800732
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaagg 86  Q
    ||||||||||||  |||| ||||||||| | |||||||||||||||||||||||||||    
T  39800675 tcctcggtagtttgctgccgccggtttaatcaaaacttcggcagttaactgccgaagg 39800732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 14002570 - 14002490
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||| |||||||||| |||||||  |||||| ||| ||||||||||||||| ||| ||||  ||||  |||||||||    
T  14002570 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgagggacatttgagtaatttactcgtgt 14002490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 20951105 - 20951161
Alignment:
Q  66 tcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttat 122  Q
    |||||||||||||||||||||  ||||||||||  |||| |||||||| ||||||||    
T  20951105 tcggcagttaactgccgaagggcatttaggtaatttactggtgtggcacagccttat 20951161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 29407908 - 29407972
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatattt 92  Q
    |||||||| ||||||||||| |||||||  |||||| |||| |||||||||||||| ||| ||||    
T  29407908 tttcctcgttagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacattt 29407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 37294352 - 37294312
Alignment:
Q  69 gcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  37294352 gcagttaactgccgaaggatatttgggtaaattactcgtgt 37294312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 2528721 - 2528607
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||| ||||||||||| |||||||   |||   ||||||||||||||||||||||  |||  |||||| |||| ||||| || ||||||||  |||    
T  2528721 tttcctcgatagttaactgcagccggttccataa---ttcggcagttaactgccgaagggcattgcggtaaattactagtgtgacacagccttatgcaat 2528625  T
Q  128 gtataaacaacaattctc 145  Q
    || | |||| ||||||||    
T  2528624 gtgtgaacagcaattctc 2528607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 3943217 - 3943268
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||| |||||||||| ||||| ||  |||||||||||||||||||||||||    
T  3943217 ctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 3943268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 16544393 - 16544342
Alignment:
Q  58 ttaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||| ||||||| ||||||| |||||||||||||| |||| |||||||||    
T  16544393 ttaaaatttcggcaattaactgtcgaaggatatttagataaattactcgtgt 16544342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 18003294 - 18003349
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga 83  Q
    ||||||||||||||||||| ||||||||  | ||||| ||||||||||||||||||    
T  18003294 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccga 18003349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 22003422 - 22003513
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||  ||||  ||||  ||||||||||||| ||||    
T  22003422 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagcc 22003513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 26544010 - 26544065
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||| |||||||||||| |||||||| || | | |||||||||||||||||||    
T  26544010 tttcctcagtagttaactgcagccggtttcttcagaattcggcagttaactgccga 26544065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 33222668 - 33222613
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| |||||||  |||||| ||||| |||||||||||||    
T  33222668 tttcctcggcagttaactgcagccggttctttaaaatttcggtagttaactgccga 33222613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 3940783 - 3940841
Alignment:
Q  60 aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| ||||    
T  3940783 aaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagcc 3940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 33416150 - 33416100
Alignment:
Q  59 taaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||||| |||||||||||||||| |||||  ||||| |||||||||    
T  33416150 taaaacttcggtagttaactgccgaagggtatttgagtaaattactcgtgt 33416100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 37322133 - 37322187
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    |||||||| |||||||||| |||||||  | |||| |||||||||||||||||||    
T  37322133 ttcctcggcagttaactgcagccggttcttcaaaatttcggcagttaactgccga 37322187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 43978555 - 43978497
Alignment:
Q  60 aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| ||||    
T  43978555 aaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagcc 43978497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 10334451 - 10334406
Alignment:
Q  65 ttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||||||||||||||| ||| ||||||||||| ||||| ||||    
T  10334451 ttcggcagttaactgccgatggacatttaggtaaattactcatgtg 10334406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 33002364 - 33002441
Alignment:
Q  65 ttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaatt 142  Q
    |||||||||||||| |||||||| |||| | |||| ||||||||||  |||| |||||  ||||| | ||||||||||    
T  33002364 ttcggcagttaactaccgaaggacatttcgataaattactcgtgtgatagagtcttatgtaatgtgtcaacaacaatt 33002441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 39798496 - 39798439
Alignment:
Q  27 atttcctcggtagttaactgctgccggttta-ttaaaacttcggcagttaactgccga 83  Q
    |||||||||| |||||||||| |||||||   || |||||||||||||||||||||||    
T  39798496 atttcctcggcagttaactgccgccggttgccttcaaacttcggcagttaactgccga 39798439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 3086057 - 3085969
Alignment:
Q  59 taaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctctt 147  Q
    ||||||||||||||||||||||||| | | ||||  ||||  ||||||||||||| | ||  | |||||||   |||||||||||||||    
T  3086057 taaaacttcggcagttaactgccgaggaacatttgagtaatttactcgtgtggcacaaccaaactaaatgtgggaacaacaattctctt 3085969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 5352014 - 5351930
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||||||  |||| ||||||| | | ||||||||||||||||||||| |||||  |||| ||||   |||||||||||||    
T  5352014 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgcagaagggcattttggtattttactcgtgtggca 5351930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 15831177 - 15831061
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatta-aaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatg 128  Q
    ||||||||||| | |||| ||||||| | || ||||||||| ||||||||||||||||  ||||  |||   ||||||||||||| |||| || || |||    
T  15831177 tcctcggtagtaagctgccgccggttcactacaaacttcggtagttaactgccgaagggaattttcgtattttactcgtgtggcacagccatactatatg 15831078  T
Q  129 tataaacaacaattctc 145  Q
    |   |||||||||||||    
T  15831077 tgggaacaacaattctc 15831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 28342577 - 28342517
Alignment:
Q  26 aatttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||||||| |||||| ||| |||||||| | ||  ||||| |||||||||||||||||    
T  28342577 aatttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaagg 28342517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 6e-35; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 3501201 - 3501086
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgt 129  Q
    |||||||||||||||||| || |||||| |||||||||| |||||||||||||||||  ||||| |||||||||||||||||||||||||||| ||||||    
T  3501201 tcctcggtagttaactgccgctggtttactaaaacttcgacagttaactgccgaagggcatttacgtaaaatactcgtgtggcagagccttatcaaatgt 3501102  T
Q  130 ataaacaacaattctc 145  Q
     |||||| ||||||||    
T  3501101 gtaaacagcaattctc 3501086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 9048127 - 9048069
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  9048127 tttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaagg 9048069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 26351117 - 26351211
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttat 122  Q
    ||||||||| |||||||||| ||||||||| |||||||||| |||||||||| |||| || ||||  ||||| ||||||||||||| || |||||    
T  26351117 tttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgtcgaatgacattttcgtaaagtactcgtgtggcacagtcttat 26351211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 26350026 - 26349910
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||   ||||  |||||||||||||||| || | ||||||  |||    
T  26350026 tttcctcggcagttaactgccgccggtttactaaa-cttcggcagttaactgccgaagagcattttcgtaaaatactcgtgtgacacaaccttatgcaat 26349928  T
Q  128 gtataaacaacaattctc 145  Q
     | |||| ||||||||||    
T  26349927 atgtaaataacaattctc 26349910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 26423030 - 26422915
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgt 129  Q
    ||||||| |||||||||| ||||||||| |||||||||| |||| |||| ||||| || ||||   |||| ||||||||| ||| | |||||| |||| |    
T  26423030 tcctcggaagttaactgccgccggtttactaaaacttcgacagtaaactaccgaatgacattttaataaagtactcgtgtagcacaaccttatcaaatat 26422931  T
Q  130 ataaacaacaattctc 145  Q
     |||||||||||||||    
T  26422930 gtaaacaacaattctc 26422915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 9049105 - 9049163
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||||    
T  9049105 tttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgtcgaagg 9049163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 15888821 - 15888901
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| ||||||||  ||||||||||| |||||||||||||||| | ||| |||||| |||||||||    
T  15888821 tttcctcggcagttaactgcagccggttttctaaaacttcggtagttaactgccgaagg-tgtttgggtaaattactcgtgt 15888901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 24719960 - 24719880
Alignment:
Q  61 aaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaat 141  Q
    ||||||||||||||||||||||||||| ||||||||||| || ||||||| |  ||||| || |||||| | |||||||||    
T  24719960 aaacttcggcagttaactgccgaaggacatttaggtaaattagtcgtgtgtctcagcctaatcaaatgtgtcaacaacaat 24719880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 32223534 - 32223652
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||| ||||||||| |||| ||| || |||||||||||||||||||||||| || ||||   |||| |||| ||||  |  |||||||||||||    
T  32223534 tttcctcggtggttaactgcagccgattttttcaaacttcggcagttaactgccgaatgacattttcataaagtactagtgtttctcagccttattaaat 32223633  T
Q  128 gtataaacaacaattctct 146  Q
    || ||  || |||||||||    
T  32223634 gtgtattcagcaattctct 32223652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 14012396 - 14012513
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||  ||||| ||  |||||||||||||||||||||| |||||  |   | || |  ||||||||||||| |||||||||||||    
T  14012396 tttcctcggcagttaactgaagccggatttctaaaacttcggcagttaactgctgaagggcaaaaacgtcatttactcgtgtggcacagccttattaaat 14012495  T
Q  128 gtataaacaacaattctc 145  Q
    ||   |||||||||||||    
T  14012496 gtgggaacaacaattctc 14012513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 2109569 - 2109479
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||||||||  | |||||  ||||  ||||||||||||| ||||    
T  2109569 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagaggtatttgagtaatttactcgtgtggcacagcc 2109479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 25554757 - 25554667
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||| || |||||||||| ||||  ||  ||||||||||||||||||||||||| || |||||  ||||  ||||||||||||| ||||    
T  25554757 tttcctaggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagcc 25554667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 32222581 - 32222523
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||| |||||||||||| |||| ||| || ||||||| ||||||||||||||||||    
T  32222581 tttcctcagtagttaactgcagccgattttttcaaacttcagcagttaactgccgaagg 32222523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 13382681 - 13382590
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||| ||||| ||| |||||||| ||||  ||||  ||||||||||||| ||||    
T  13382681 tttcctcggcagttaactgccgccggtttcctaaaaacttcgtcagtttactaccgaaggacatttgagtaatttactcgtgtggcacagcc 13382590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 22305160 - 22305102
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaag 85  Q
    ||||||||| |||||||||| ||||| || || |||| |||||||||||||||||||||    
T  22305160 tttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 22305102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 29076344 - 29076402
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||| | |||||||||| ||||| ||  |||||||||| |||||||||||||||||    
T  29076344 tttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaagg 29076402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 29109877 - 29109935
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||| | |||||||||| ||||| ||  |||||||||| |||||||||||||||||    
T  29109877 tttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaagg 29109935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 29111317 - 29111375
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||| | |||||||||| ||||| ||  |||||||||| |||||||||||||||||    
T  29111317 tttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaagg 29111375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 32395961 - 32395904
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaag 85  Q
    |||||||| ||||||| ||| |||||| || |||||||||| | ||||||||||||||    
T  32395961 tttcctcgatagttaattgccgccggtatactaaaacttcgacggttaactgccgaag 32395904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 9e-34; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 22550886 - 22551003
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||| ||  ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||| ||||    
T  22550886 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggtaaattactcgtgtggcacagccttatcaaat 22550985  T
Q  128 gtataaacaacaattctc 145  Q
    || |||||||||||||||    
T  22550986 gtgtaaacaacaattctc 22551003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 45409920 - 45409806
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgta 130  Q
    |||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||  ||||  ||||| ||||||||||||| ||||||||  |||||     
T  45409920 cctcggcagttaactgccgccgatttactaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcacagccttatgtaatgtg 45409821  T
Q  131 taaacaacaattctc 145  Q
    |||||| ||||||||    
T  45409820 taaacagcaattctc 45409806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 34371872 - 34371985
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtata 132  Q
    |||| |||| ||||| ||||||||| |||||||||||||||||||||| |||||  |||||| |||| |||| |||||| ||| |||||| |||||| ||    
T  34371872 tcggcagtttactgccgccggtttactaaaacttcggcagttaactgctgaagggcatttagataaattacttgtgtggaagaaccttatcaaatgtgta 34371971  T
Q  133 aacaacaattctct 146  Q
    ||||||||||||||    
T  34371972 aacaacaattctct 34371985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 10749695 - 10749813
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| || |||||| ||||||||||||||||||||||||||||  ||||  ||||| | ||||||||||| | ||||||  |||    
T  10749695 tttcctcggcagttaactgccgctggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaagttctcgtgtggcacaaccttatgtaat 10749794  T
Q  128 gtataaacaacaattctct 146  Q
    || |||||| |||||||||    
T  10749795 gtgtaaacagcaattctct 10749813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 20854660 - 20854550
Alignment:
Q  37 tagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaaca 136  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||| ||| || ||| |||| |||||||||  |  |||||||| |||||| | ||||    
T  20854660 tagttaactgccgccggttttctaaaacttcggcagttaactgccgagggacatgtagataaattactcgtgtttctcagccttatcaaatgtgtgaaca 20854561  T
Q  137 acaattctctt 147  Q
    |||||||||||    
T  20854560 acaattctctt 20854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 40740958 - 40740877
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| |||||||  |||||| ||||||||||||||| |||||||||||| |||||| |||||||||    
T  40740958 tttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaaggatatttgggtaaattactcgtgt 40740877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 22547519 - 22547436
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    |||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||  ||||||| ||| ||||| |||||||    
T  22547519 tcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggcaaattactcatgtggca 22547436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 44727526 - 44727644
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| |||| ||| || |||||||||||||||| |||||||||| ||||  |||||||||| ||||  |  |||||||||||||    
T  44727526 tttcctcggtagttaactgcagccgtttt-ttcaaacttcggcagttaattgccgaaggacattttcgtaaaatactagtgtttctcagccttattaaat 44727624  T
Q  128 gtataaacaacaattctctt 147  Q
    || ||  || ||||||||||    
T  44727625 gtgtattcagcaattctctt 44727644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 34503083 - 34503197
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| |||||||   |||   ||||||||||||||||||| || ||||| |||||| |||||||||| || | ||||||  |||    
T  34503083 tttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccgaggggtatttcggtaaattactcgtgtgacacacccttatgcaat 34503179  T
Q  128 gtataaacaacaattctc 145  Q
    || | |||||||||||||    
T  34503180 gtgtcaacaacaattctc 34503197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 28617620 - 28617530
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||||||||||| |||||  ||||  ||||||||||||| ||||    
T  28617620 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagcc 28617530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 7120948 - 7120871
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||| || ||||||| |||||||| || ||| ||| |||||||||||||||||||||||||| |||| |||||||||    
T  7120948 ctcggcagctaactgcagccggtttctttaaaattcagcagttaactgccgaaggatatttagataaattactcgtgt 7120871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 31745234 - 31745153
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||| |||||||||||| || | |||  |||||||||||||||||||| ||||||| ||||| |||||| |||||||||    
T  31745234 tttcctcagtagttaactgcagctgtttttctaaaacttcggcagttaactaccgaagggtatttgggtaaattactcgtgt 31745153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 16939431 - 16939351
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||| |||||||||| |||||||  |||||| ||| |||||||||||||||| | ||||| |||||| |||||||||    
T  16939431 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgaaaggtatttgggtaaattactcgtgt 16939351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 39252105 - 39252021
Alignment:
Q  26 aatttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||||||| |||||||||| ||||||||| ||| ||||| |||||| |||||||||||  ||||  ||||| ||||||||||    
T  39252105 aatttcctcggcagttaactgccgccggtttactaatacttcagcagttgactgccgaagggcattttcgtaaagtactcgtgtg 39252021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 7340118 - 7340027
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||| |||||||| || ||||| |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  7340118 ttcctcggtagttaactgccgccggtttcttaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 7340027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 39831200 - 39831126
Alignment:
Q  36 gtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||||||||||| ||||||||  ||||| |||||||||||||| |||| ||  ||||||||||| ||||||||||    
T  39831200 gtagttaactgcagccggttttctaaaatttcggcagttaactaccgaggggcatttaggtaaattactcgtgtg 39831126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 30305564 - 30305656
Alignment:
Q  28 tttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||||||||| ||||||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  30305564 tttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 30305656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 43211585 - 43211493
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaactt-cggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||| |||||||||| | ||||||| ||||| || ||||||| ||||||||||||  ||||  ||||| ||||||||||||| ||||    
T  43211585 atttcctcggcagttaactgccgtcggtttactaaaaatttcggcagtaaactgccgaagggcattttcgtaaagtactcgtgtggcacagcc 43211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 44726552 - 44726476
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||||||||| |||| ||| || |||||||| |||||||||||||||||| ||||  ||||| |||| ||||    
T  44726552 tcggtagttaactgcagccgattttttcaaacttcgacagttaactgccgaaggacattttcgtaaagtactagtgt 44726476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 5533046 - 5533165
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||||| || || |||||  ||||  ||||||||||||| ||||  || |||     
T  5533046 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgtgtggcacagccaaatcaaaa 5533145  T
Q  128 gtataaacaacaattctctt 147  Q
    ||   |||||||||||||||    
T  5533146 gtgggaacaacaattctctt 5533165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 36127424 - 36127342
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||| | |||||||| | ||||||||  |||||||||| ||||||||||||||  ||  |||||||||| ||||||||||    
T  36127424 tttcctcagcagttaacttcagccggttttctaaaacttcgtcagttaactgccgagagacgtttaggtaaattactcgtgtg 36127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 40075181 - 40075067
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgta 130  Q
    |||||||||||||||||  ||| ||| || ||| ||||||| ||||||| ||||||  ||||| ||||| |||||||||| |  ||||| |  ||||||     
T  40075181 cctcggtagttaactgcaaccgctttcttcaaaattcggcacttaactgtcgaagggcatttaagtaaattactcgtgtgtctcagcctaaccaaatgtg 40075082  T
Q  131 taaacaacaattctc 145  Q
    | |||||||||||||    
T  40075081 tcaacaacaattctc 40075067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 43363281 - 43363371
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||||||||| ||||  ||  |||||||||||||||||| ||||||  | |||||  ||||  ||||||||||||| ||||    
T  43363281 tttcctcggtagttaactgcagccgtatttctaaaacttcggcagttaagtgccgagaggtatttgagtaatttactcgtgtggcacagcc 43363371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 44933911 - 44933825
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcag 114  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||||||||||||||||| ||  ||||  ||||  ||||||||||||||    
T  44933911 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcag 44933825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 45410952 - 45411034
Alignment:
Q  40 ttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttat 122  Q
    |||||||| ||||||||| |||||||||  ||||||||||| |||||| ||||  ||||| ||||| ||||||| | ||||||    
T  45410952 ttaactgccgccggtttactaaaacttccacagttaactgctgaaggacattttcgtaaagtactcatgtggcacaaccttat 45411034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 5532476 - 5532423
Alignment:
Q  65 ttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||||||  |||| |||||| ||||||||||||| ||||    
T  5532476 ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagcc 5532423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 22510598 - 22510509
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||  |||| ||||||| | | |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| ||||    
T  22510598 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagcc 22510509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 26659504 - 26659447
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaagg 86  Q
    ||||||||||||| |||| ||||||| | ||||| |||||||||||||||||||||||    
T  26659504 tcctcggtagttagctgccgccggttcactaaaaacttcggcagttaactgccgaagg 26659447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 28694130 - 28694049
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| ||||||||    ||||||||||||||||||||||| ||| ||||  ||||  |||||||||    
T  28694130 tttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgt 28694049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 34234561 - 34234516
Alignment:
Q  101 tactcgtgtggcagagccttattaaatgtataaacaacaattctct 146  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||    
T  34234561 tactcgtgtggcacagccttatcaaatgtgtaaacaacaattctct 34234516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 914769 - 914682
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  |||   || |||||||||||||||||||  |||| |||||| ||||||| ||||| ||||    
T  914769 tttcctcggcagttaactgcagccggtttcataa---tttggcagttaactgccgaagggcatttgggtaaattactcgtctggcatagcc 914682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 13783129 - 13783185
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaa 84  Q
    ||||||||| |||||||||| |||||||  |||||| |||| |||||||||||||||    
T  13783129 tttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccgaa 13783185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 20859627 - 20859707
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||| |||||| ||| ||||||||    ||||||||||||||||||| ||| ||| ||||||||||| | ||||||||    
T  20859627 tcctcgggagttaaatgcagccggtttccacaaacttcggcagttaactgtcgagggacatttaggtaaattcctcgtgtg 20859707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 21406319 - 21406267
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgc 80  Q
    |||||||||||||||||||| |||||||||| ||  | |||||||||||||||    
T  21406319 tttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgc 21406267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 21800811 - 21800759
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgc 80  Q
    |||||||||||||||||||| |||||||||| ||  | |||||||||||||||    
T  21800811 tttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgc 21800759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 28618460 - 28618547
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| | |||||||| ||||||||  |||   ||||||||||||||||||||||  |||| |||||| |||| |||||||| ||||    
T  28618460 tttcctcggcatttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgggtaaattacttgtgtggcatagcc 28618547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 38135630 - 38135682
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgc 80  Q
    |||||||||||||||||||| |||||||||| ||  | |||||||||||||||    
T  38135630 tttcctcggtagttaactgcagccggtttataaattcctcggcagttaactgc 38135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 184573 - 184664
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||  ||||  ||||  ||||||||||||| ||||    
T  184573 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcc 184664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 8419456 - 8419365
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| | |||| ||  |||||||||||||||||| ||||   ||||||||||||| ||||    
T  8419456 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaaggatattttggtattttactcgtgtggcacagcc 8419365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 15030936 - 15030845
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||  ||||  ||||  ||||||||||||| ||||    
T  15030936 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagcc 15030845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 22014456 - 22014547
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||  ||||  ||||  ||||||||||||| ||||    
T  22014456 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaatttactcgtgtggcacagcc 22014547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 23022308 - 23022367
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaagg 86  Q
    ||||||||||||||| |||| ||||||| | ||||| ||||| |||||||||||||||||    
T  23022308 tttcctcggtagttagctgccgccggttcactaaaaacttcgacagttaactgccgaagg 23022367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 32378943 - 32379034
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||| || |||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  32378943 ttcctcggtagttaactgccgctggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 32379034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 32432898 - 32432989
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||| || |||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  32432898 ttcctcggtagttaactgccgctggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 32432989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 34366963 - 34366912
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactg 79  Q
    ||||||||| |||||||||| ||||| ||  |||||||||||||||||||||    
T  34366963 tttcctcggaagttaactgcagccggatttataaaacttcggcagttaactg 34366912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 36677950 - 36678041
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||  ||||  ||||  ||||||||||||| ||||    
T  36677950 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcc 36678041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 39491155 - 39491040
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtat 131  Q
    ||||| |||||||||  |||||||| |  ||| |||| ||||||||||||||| || ||||| ||||| |||||||||| |  ||| | |  |||||| |    
T  39491155 ctcggaagttaactgtagccggtttctataaaattcgacagttaactgccgaaagacatttatgtaaattactcgtgtgtctcagcttaaccaaatgtgt 39491056  T
Q  132 aaacaacaattctctt 147  Q
     |||||||||||||||    
T  39491055 caacaacaattctctt 39491040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 39601756 - 39601705
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactg 79  Q
    ||||||||| |||||||||| ||||| ||  |||||||||||||||||||||    
T  39601756 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactg 39601705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 41472065 - 41472116
Alignment:
Q  58 ttaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||| ||||||||||||||| |||||| ||||| |||||| |||||||||    
T  41472065 ttaaaatttcggcagttaactgtcgaagggtatttgggtaaattactcgtgt 41472116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 45066382 - 45066473
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||  ||||  ||||  ||||||||||||| ||||    
T  45066382 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagcc 45066473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 25588 - 25674
Alignment:
Q  60 aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctct 146  Q
    |||||||||||||||||||||||||||  |||| | ||   ||||||||||||| |||| || || ||||   ||||||||||||||    
T  25588 aaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaattctct 25674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 2335169 - 2335259
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||| ||||||||||||| ||  ||||  ||||  ||||||||||||| ||||    
T  2335169 tttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagcc 2335259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 27501652 - 27501562
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||| |||||||||||||  | |||||  ||||  ||||||||||||| ||||    
T  27501652 tttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgagaggtatttgagtaatttactcgtgtggcacagcc 27501562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 13782287 - 13782206
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||| ||| | |||||  |||||| || |||||||||||||||| ||| ||||| ||||  |||||||||    
T  13782287 tttcctcggcagttaattgcagtcggttctttaaaattttggcagttaactgccgagggacatttaagtaatttactcgtgt 13782206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 27502589 - 27502705
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||||||  |||   |||| |||||||||||||| ||  ||||  ||||  ||||||||||||| ||||  |  ||||    
T  27502589 tttcctcggcagttaactgcagccggtttcataa---ttcgacagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaat 27502685  T
Q  128 gtataaacaacaattctctt 147  Q
    |||  |||||||||||||||    
T  27502686 gtaggaacaacaattctctt 27502705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 32584104 - 32584019
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||| |||||||||| ||||  ||  |||||||||| ||||||||| |||| || |||||  ||||  |||||||||||||    
T  32584104 tttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccgaggggtatttgagtaatttactcgtgtggca 32584019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 34892830 - 34892907
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactc 105  Q
    ||||||||| |||||||||| | |||||  |||||| ||||  ||| ||||||||||||||||||  ||||| |||||    
T  34892830 tttcctcggcagttaactgcagtcggttctttaaaatttcgaaagtcaactgccgaaggatatttgagtaaattactc 34892907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 44885763 - 44885686
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||| ||||||||||  ||| |||  |||||||||  ||||||||||||||| ||||||||  |||| |||||||||    
T  44885763 ctcggcagttaactgcaaccgattttctaaaacttcaacagttaactgccgaaagatatttaaataaattactcgtgt 44885686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 8423810 - 8423866
Alignment:
Q  28 tttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga 83  Q
    |||||||||||||||||||| |||| |||  | ||||| ||||||||||||||||||    
T  8423810 tttcctcggtagttaactgccgccgatttcctaaaaacctcggcagttaactgccga 8423866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 28694487 - 28694559
Alignment:
Q  75 aactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctctt 147  Q
    ||||||||||||  ||||  ||||||||||||||||||| | ||||||  ||||| | |||| ||||||||||    
T  28694487 aactgccgaagggcattttcgtaaaatactcgtgtggcacaaccttatgtaatgtgttaacagcaattctctt 28694559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 32585014 - 32585101
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  |||   |||||||||||||| |||| ||| ||||  ||||  ||||||||||||| ||||    
T  32585014 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactaccgagggacatttgagtaatttactcgtgtggcatagcc 32585101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 36595967 - 36596023
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaa 84  Q
    ||||||||| |||||||||| |||||||  |||||| |||| || ||||||||||||    
T  36595967 tttcctcggcagttaactgcagccggttctttaaaatttcgacaattaactgccgaa 36596023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 37656847 - 37656903
Alignment:
Q  49 gccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactc 105  Q
    |||||||  |||||| |||||||||||||||| |||||||||||  ||||| |||||    
T  37656847 gccggttctttaaaaattcggcagttaactgctgaaggatatttgagtaaattactc 37656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 38604269 - 38604333
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatattt 92  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||||||||||||| ||| || |||||    
T  38604269 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggtattt 38604333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 42485562 - 42485650
Alignment:
Q  31 cctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||   |||| ||||||||| | ||||||||| |||||||||||||||||| |||| | ||   ||||||||||||| ||||    
T  42485562 cctcggtagtatgctgccgccggtttactcaaaacttcgacagttaactgccgaaggacattttgatattttactcgtgtggcacagcc 42485650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 9e-34; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 3186090 - 3186203
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtata 132  Q
    |||| |||||||||| ||||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||| ||    
T  3186090 tcggcagttaactgccgccggtttactaaaacttctgcagttaactgtcgaaggacatttaggtaaaatactcgtgtggcacagccttatcaaatgtgta 3186189  T
Q  133 aacaacaattctct 146  Q
    |||| |||||||||    
T  3186190 aacagcaattctct 3186203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 28235582 - 28235700
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||  ||||||||||||||||| | ||||||||  |||    
T  28235582 tttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaaatactcgtgtggtacagccttatgtaat 28235681  T
Q  128 gtataaacaacaattctct 146  Q
    || ||||||||||||||||    
T  28235682 gtgtaaacaacaattctct 28235700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 3184028 - 3183919
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtata 132  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| |||||||| |||||| ||    
T  3184028 tcggcagttaactgccgccggtttactaaaacttcggcagttaactgtcgaaggacatttagataaaatactcgtgtggcacagccttatcaaatgtgta 3183929  T
Q  133 aacaacaatt 142  Q
    | ||||||||    
T  3183928 agcaacaatt 3183919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 16473701 - 16473817
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||  ||||| ||||||||||||| | ||||||  |||    
T  16473701 tttcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcacaaccttatgtaat 16473800  T
Q  128 gtataaacaacaattct 144  Q
    || |||||| |||||||    
T  16473801 gtgtaaacagcaattct 16473817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 34528205 - 34528098
Alignment:
Q  39 gttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaac 138  Q
    ||||||||| ||||||||| |||||||||| |||||||||| ||||||  ||||  ||||| ||||||||| ||| ||||||||  ||||||||||||||    
T  34528205 gttaactgccgccggtttactaaaacttcgacagttaactgtcgaagggcattttcgtaaagtactcgtgtagcacagccttatgtaatgtataaacaac 34528106  T
Q  139 aattctct 146  Q
    ||||||||    
T  34528105 aattctct 34528098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 44680097 - 44680172
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactc 105  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  44680097 tcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgtcgaaggacatttaggtaaattactc 44680172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 56565809 - 56565693
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||||||| |||||||||| ||||||||||| ||||   ||||  ||||| ||||||||||||| ||||||||  |||    
T  56565809 tttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgctgaagagaattttcgtaaactactcgtgtggcacagccttatgtaat 56565710  T
Q  128 gtataaacaacaattct 144  Q
    || |||||| |||||||    
T  56565709 gtgtaaacagcaattct 56565693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 40061181 - 40061264
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||||||||||||||||||||  |||||||  |||||||||||| |||||||||||| ||  ||||||||||| ||||||||||    
T  40061181 atttcctcggtagttaactgcaaccggttttctaaaacttcggcggttaactgccgatgggcatttaggtaaattactcgtgtg 40061264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 37856765 - 37856846
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |  ||||||| |||||||  |||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  37856765 tttcctcggcacctaactgcagccggttctttaaaatttcggcagttaactgccaaaggatatttaggtaaattactcgtgt 37856846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 43176649 - 43176730
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| || ||||  |||||| ||||||||||||||| |||||| |||||||||||| |||||||||    
T  43176649 tttcctcggcagttaactgcagcaggttctttaaaatttcggcagttaactgtcgaagggtatttaggtaaattactcgtgt 43176730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 34530792 - 34530884
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttat 122  Q
    ||||||| |||||||||| ||| | ||  |||||||||| |||||||||||||||||| ||||||||||| || |||||||||  ||||||||    
T  34530792 tcctcggcagttaactgcagccagatttctaaaacttcgacagttaactgccgaaggacatttaggtaaattattcgtgtggcccagccttat 34530884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 31242269 - 31242182
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    |||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||  ||||  ||||  |||||||||||||    
T  31242269 atttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttgagtaatttactcgtgtggca 31242182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 38368280 - 38368166
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||||||  |||   ||||||||||||||||||||||| |||| | |||| ||||||||||||| ||||  | |||||    
T  38368280 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaaggacatttggataaattactcgtgtggcatagccaaactaaat 38368184  T
Q  128 gtataaacaacaattctc 145  Q
    ||   |||||||||||||    
T  38368183 gtgggaacaacaattctc 38368166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 46165794 - 46165680
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| |||||||   |||   |||| |||||||||||||||||| |||| |||||| |||| ||||| || ||||||||  |||    
T  46165794 tttcctcggtagttaactgcagccggttccataa---ttcgacagttaactgccgaaggacatttcggtaaattactagtgtgacacagccttatacaat 46165698  T
Q  128 gtataaacaacaattctc 145  Q
    || | |||||||||||||    
T  46165697 gtgtcaacaacaattctc 46165680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 51494875 - 51494976
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtata 132  Q
    |||| ||||| |||| ||| ||||| ||||||||| ||||||||||||||||||  ||||||||||| || ||||||| || | |||||| |||||| ||    
T  51494875 tcggcagttagctgccgccagtttactaaaacttctgcagttaactgccgaagggcatttaggtaaattattcgtgtgacacaaccttatcaaatgtgta 51494974  T
Q  133 aa 134  Q
    ||    
T  51494975 aa 51494976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 55587407 - 55587291
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||||||  |||   ||||||||||||||||||||||  |||| |||||| ||||||||||||| ||||  |  ||||    
T  55587407 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaaccaaat 55587311  T
Q  128 gtataaacaacaattctctt 147  Q
    ||   |||||||||||||||    
T  55587310 gtgggaacaacaattctctt 55587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 55588308 - 55588395
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  |||   ||||||||||||||||||||||  |||| |||||| ||||||||||||| ||||    
T  55588308 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagcc 55588395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 26792265 - 26792356
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||| ||||| ||||||||||||| |||||||||  ||||  ||||  ||||||||||||| ||||    
T  26792265 tttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaattgccgaagggcatttgagtaatttactcgtgtggcacagcc 26792356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 39773456 - 39773365
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||||||||||||  ||||| ||||||||||| ||| |||||||| ||||  ||||  ||||||||||||| ||||    
T  39773456 tttcctcggcagttaactgctgccggtttcctaaaaacttcggcagtttactaccgaaggacatttccgtaacttactcgtgtggcacagcc 39773365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 16984182 - 16984300
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagccttattaaa 126  Q
    ||||||||| |||||||||| ||||| ||  |||||||||||||||||||||||||  || ||   | || |  ||||||||||||| |||||||| |||    
T  16984182 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcatttactcgtgtggcacagccttatcaaa 16984281  T
Q  127 tgtataaacaacaattctc 145  Q
    ||| |||||| ||||||||    
T  16984282 tgtgtaaacagcaattctc 16984300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 38369203 - 38369293
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||||||||||| |||||  ||||  ||||||| ||||| ||||    
T  38369203 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtatggcacagcc 38369293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 40833631 - 40833721
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||||||||||||||||| || |||||  ||||  ||||||||||||| ||||    
T  40833631 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagcc 40833721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 44795112 - 44794994
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaa 126  Q
    |||| ||||| |||| ||||| ||| ||||| |||||||||||||||||||||||||| |  ||||  ||||| ||||||||| ||| ||||| ||  ||    
T  44795112 attttctcggcagtttactgccgccagtttactaaaacttcggcagttaactgccgaatggcattttcgtaaagtactcgtgtagcacagcctcatgtaa 44795013  T
Q  127 tgtataaacaacaattctc 145  Q
     || |||||| ||||||||    
T  44795012 agtgtaaacagcaattctc 44794994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 28234468 - 28234383
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||| | |||||||| ||||||||| |||||||||| || ||||||| ||||||  ||||  ||||| |||||||||||||    
T  28234468 tttcctcggcatttaactgccgccggtttactaaaacttcgacaattaactgtcgaagggcatttttgtaaagtactcgtgtggca 28234383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 48806537 - 48806456
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| |||||||  |||||| |||| ||||||||||||||| | ||||| | |||| |||||||||    
T  48806537 tttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccgaaaggtatttggataaattactcgtgt 48806456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 51037489 - 51037606
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||| ||| ||||  ||  ||||||||||||||||||||||||| ||| ||||  ||||  ||||||||||||| ||||  | |||||    
T  51037489 tttcctcggcagttaattgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaactaaat 51037588  T
Q  128 gtataaacaacaattctc 145  Q
    ||   |||||||||||||    
T  51037589 gtgggaacaacaattctc 51037606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 145
Target Start/End: Original strand, 6181814 - 6181930
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatg 128  Q
    ||||||||||||  |||| ||||||| | | |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| |||| || || |||    
T  6181814 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatg 6181913  T
Q  129 tataaacaacaattctc 145  Q
    |   |||||||||||||    
T  6181914 tgggaacaacaattctc 6181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 7485683 - 7485802
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatg 128  Q
    |||||||| |||||| ||| ||||  ||  |||||||||| |||||||||||||| ||  |||| |||||| ||||||||||||| ||||  |  |||||    
T  7485683 ttcctcggcagttaattgcagccgtatttctaaaacttcgacagttaactgccgaggggcatttgggtaaattactcgtgtggcatagccaaaccaaatg 7485782  T
Q  129 tataaacaacaattctcttc 148  Q
    |   ||||||||||||||||    
T  7485783 tgggaacaacaattctcttc 7485802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 8111438 - 8111517
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||||||||||||| ||||||||    |||||||| || ||||||||||| ||| |||||| |||| |||||||||    
T  8111438 tcctcggtagttaactgcagccggtttccacaaacttcgacaattaactgccgatggacatttagataaattactcgtgt 8111517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 9013893 - 9013972
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||| ||||||||||| |||||||     ||| ||||||||||||||||||||||  ||||||||||| ||||||||||    
T  9013893 cctcgatagttaactgcagccggttgccacaaaattcggcagttaactgccgaagggaatttaggtaaattactcgtgtg 9013972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 16983570 - 16983455
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagga-tatttaggtaaaatactcgtgtggcagagccttattaaatgta 130  Q
    ||||| |||||||||  ||||| ||  ||||||||||||||||||||||||| ||  ||   | || |  ||||||||||||| |||||||| ||||||     
T  16983570 ctcggcagttaactgtagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcatttactcgtgtggcacagccttatcaaatgtg 16983471  T
Q  131 taaacaacaattctct 146  Q
    ||||||||||||||||    
T  16983470 taaacaacaattctct 16983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 49090499 - 49090408
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||  |||| ||||||| | | |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| ||||    
T  49090499 tttcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagcc 49090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 49566470 - 49566557
Alignment:
Q  28 tttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggca 113  Q
    |||||||||||||||||||| ||||||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| ||||||||    
T  49566470 tttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggca 49566557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 13182121 - 13182239
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatg 128  Q
    ||||||||||||  |||| ||||||||| | ||||||||| ||||||||||||||| |  |||| ||||   ||||||||||||| |||| || || |||    
T  13182121 tcctcggtagtttgctgccgccggtttactcaaaacttcgacagttaactgccgaaaggcattttggtattttactcgtgtggcacagccatactatatg 13182220  T
Q  129 tataaacaacaattctctt 147  Q
    |   |||||||||||||||    
T  13182221 tgggaacaacaattctctt 13182239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 14200613 - 14200531
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||||| |||||||||| ||||  ||  |||||||||| |||||||||||||| ||||||||  ||||  ||||||||||    
T  14200613 tttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagggatatttgagtaatttactcgtgtg 14200531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 21022909 - 21022999
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||||||||||||||||| ||  ||||  ||||  ||||||||||||| ||||    
T  21022909 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagcc 21022999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 23220730 - 23220640
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||| |||| |||||||||| ||||  ||  ||||||||||||||||||||||| |||| |||||  ||||  ||||||||||||| ||||    
T  23220730 tttcatcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccaaagggtatttgagtaatttactcgtgtggcacagcc 23220640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 28081510 - 28081452
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||||| |||||||||| | ||| ||  ||||||||||||||||||||||||||||    
T  28081510 tttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccgaagg 28081452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 13173284 - 13173195
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||  |||| ||||||||| | |||||||||||||||||||| ||||||  |||| ||||   ||||||||||||| ||||    
T  13173284 tcctcggtagtttgctgccgccggtttaatcaaaacttcggcagttaactgtcgaagggcattttggtattttactcgtgtggcacagcc 13173195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 31421756 - 31421699
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaagg 86  Q
    ||||||||||||| |||| ||||||| | ||||| |||||||||||||||||||||||    
T  31421756 tcctcggtagttagctgccgccggttcactaaaaacttcggcagttaactgccgaagg 31421699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 37855910 - 37855841
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaa 98  Q
    |||||||| |||||||||| |||||||  |||||| ||||| ||||||||||||| | ||||||| ||||    
T  37855910 ttcctcggcagttaactgcagccggttctttaaaatttcggaagttaactgccgatgaatatttaagtaa 37855841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 50196936 - 50197049
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtata 132  Q
    ||||||||||||||| | |  |||  ||||||||||| ||||||||||||| ||  ||||||||||| || ||||||| |  ||||  || |||||| |     
T  50196936 tcggtagttaactgcagtcaattttctaaaacttcggtagttaactgccgaggggcatttaggtaaattattcgtgtgtcttagccaaatcaaatgtgtc 50197035  T
Q  133 aacaacaattctct 146  Q
    ||||||||||||||    
T  50197036 aacaacaattctct 50197049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 50447060 - 50447003
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaag 85  Q
    ||||||||  |||||||||| ||||  || ||||||||||||||||||||||||||||    
T  50447060 tttcctcgacagttaactgcagccgtatttttaaaacttcggcagttaactgccgaag 50447003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 23221691 - 23221778
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  |||   ||||||||||||||||||||||  ||||   |||| ||||||||||||| ||||    
T  23221691 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagggcatttgaataaattactcgtgtggcatagcc 23221778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 50020167 - 50020087
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||||| |||||||||||  ||| |||  |||||||||||||||||||| || ||||  |||||| |||| ||||||||||    
T  50020167 tcctcgatagttaactgcaaccgattttctaaaacttcggcagttaactaccaaagggcatttagataaattactcgtgtg 50020087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 6189282 - 6189227
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    |||||||||||||||| |||||||| ||| || | | |||||||||||||||||||    
T  6189282 tttcctcggtagttaattgctgccgatttcttcataattcggcagttaactgccga 6189227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 18884529 - 18884580
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||| |||||||||| |||||||| | |||| |||||||||||||||||||    
T  18884529 ctcggcagttaactgcagccggtttttcaaaatttcggcagttaactgccga 18884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 40061122 - 40061071
Alignment:
Q  59 taaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||||||||| |||||||||||||| ||  ||||||||||| ||||||||||    
T  40061122 taaaacttcgacagttaactgccgaggggcatttaggtaaattactcgtgtg 40061071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 50905155 - 50905210
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| |||| ||| |||||||||||||| |||||| ||||    
T  50905155 tttcctcggcagttaactgccgccgattttttaaaacttcggcaattaactaccga 50905210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 54634036 - 54634127
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||  ||||  ||||  ||||||||||||| ||||    
T  54634036 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcc 54634127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 20208562 - 20208481
Alignment:
Q  28 tttcctcggtagttaactgctgccggtt-tattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| ||||||| || |||| |||||||||||||||||||| ||| ||||  ||||  |||||||||    
T  20208562 tttcctcggcagttaactgcagccggttctagtaaa-cttcggcagttaactgccgagggacatttgagtaatttactcgtgt 20208481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 26932683 - 26932645
Alignment:
Q  7 tcgaagaatatgaaggtataatttcctcggtagttaact 45  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  26932683 tcgaagaaaatgaaggtataatttcctcggcagttaact 26932645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 30726762 - 30726848
Alignment:
Q  28 tttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||| |||||||||||||||||||  | |||| |||||||||| ||| |||||||| ||||  |||   |||||||||||||    
T  30726762 tttcctcggcagttaactgctgccggtttcctaaaaatttcggcagtttactaccgaaggacatttccgtattttactcgtgtggca 30726848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 37563301 - 37563395
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcctta 121  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||| ||||| ||| |||||||  ||||  ||||  ||||||||||||| |||||||    
T  37563301 tttcctcggcagttaactgccgccggtttcctaaaaacttcgacagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcctta 37563395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 37880655 - 37880705
Alignment:
Q  95 gtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    ||||| ||||||||||||| ||||||||  ||||| |||||||||||||||    
T  37880655 gtaaagtactcgtgtggcacagccttatgtaatgtgtaaacaacaattctc 37880705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 44674217 - 44674163
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgcc 81  Q
    |||||||||| |||||||||| ||||| ||  | |||||||||||||||||||||    
T  44674217 atttcctcggcagttaactgcagccgggtttcttaaacttcggcagttaactgcc 44674163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 55793972 - 55793914
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaag 85  Q
    ||||||||| |||||||||| ||||| || || |||| |||||||||||||||||||||    
T  55793972 tttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 55793914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 27872431 - 27872350
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||| |||| ||||||| |  |||||||  |||||| ||||||||||||||||||| ||||||||  ||||  |||||||||    
T  27872431 tttcttcggcagttaacggaagccggttctttaaaatttcggcagttaactgccgatggatatttgagtaatttactcgtgt 27872350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 48807407 - 48807488
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||| | |||||||||| |||||||  |||||| |||| |||||||||||||| ||| ||||  ||||  |||||||||    
T  48807407 tttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacatttgagtaatttactcgtgt 48807488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 11566860 - 11566904
Alignment:
Q  65 ttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||||||||||||| ||| ||||||||||| |||| ||||    
T  11566860 ttcggcagttaactgccgatggacatttaggtaaattactagtgt 11566904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 14201551 - 14201638
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  |||   ||||||||||||||||||| ||  ||||  ||||  ||||||||||||| ||||    
T  14201551 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagcc 14201638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 46254469 - 46254533
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatattt 92  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||| ||||  |||||||    
T  46254469 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactaccgagagatattt 46254533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 50023570 - 50023650
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||||| || |||||||| |||| |||  |||||||| |||||||||||||||| ||  |||||| |||| |||| |||||    
T  50023570 tcctcgataattaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgtg 50023650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 50030688 - 50030768
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||||| || |||||||| |||| |||  |||||||| |||||||||||||||| ||  |||||| |||| |||| |||||    
T  50030688 tcctcgataattaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgtg 50030768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 9e-34; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 18609916 - 18610033
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||  | |||||||||||| ||||||| || |||||||| ||||    
T  18609916 tttcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgccaaagggcaattaggtaaaatattcgtgtgacacagccttatcaaat 18610015  T
Q  128 gtataaacaacaattctc 145  Q
    || |||||||||||||||    
T  18610016 gtgtaaacaacaattctc 18610033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 21699936 - 21699818
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||   |||||  |||||||||||||| | |||||||| |||||||| | ||    
T  21699936 tttcctcggtagttaactgccgccggtttactaaaacttcggcagttaactattgaagggaatttaggtaaaatatttgtgtggcacagccttatcatat 21699837  T
Q  128 gtataaacaacaattctct 146  Q
    || ||||||||||||||||    
T  21699836 gtgtaaacaacaattctct 21699818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 97949 - 98060
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtata 132  Q
    |||| |||||||||| |||| |||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||||| |||||||| |||||| ||    
T  97949 tcggcagttaactgccgccgatttactaaaacttcggcagttaactgttgaagagcatttaggtaaaatactcgtgtggcacagccttatcaaatgtgta 98048  T
Q  133 aacaacaattct 144  Q
    ||||||||||||    
T  98049 aacaacaattct 98060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 22524178 - 22524058
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||| ||||||| ||| ||  ||||||||||| ||||||||||||| | |||||| ||||    
T  22524178 tttcctcgggagttaactgccgccggtttactaaaacttcggcacttaactgtcgaggggcatttaggtaaattactcgtgtggcacaaccttatgaaat 22524079  T
Q  128 gtataaacaacaattctcttc 148  Q
    || |||||  |||||||||||    
T  22524078 gtgtaaacggcaattctcttc 22524058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 14985391 - 14985273
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaa 126  Q
    |||| |||||||||||||||| |||| |||| ||||||||||||||||||||| ||||||  ||||  ||||| |||| ||||| || ||||||||  ||    
T  14985391 attttctcggtagttaactgccgccgatttactaaaacttcggcagttaactgtcgaagggcattttcgtaaagtactagtgtgacacagccttatgtaa 14985292  T
Q  127 tgtataaacaacaattctc 145  Q
    ||| |||||| ||||||||    
T  14985291 tgtgtaaacagcaattctc 14985273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 22397870 - 22397778
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcctta 121  Q
    ||||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||| ||||   ||||||||||||| |||||||    
T  22397870 tcctcggcagttaactgccgccggtttactcaaaacttcggcagttaactgccgaagggtattttggtattttactcgtgtggcacagcctta 22397778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 2365286 - 2365196
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||  |||||||| |  ||||||||||||| ||||    
T  2365286 ttcctcggtagttagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtcatttactcgtgtggcacagcc 2365196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 21141075 - 21140957
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgt 129  Q
    |||||||| ||||||||| | ||||||  |||||||||||||||||| || ||||||| ||||||||||| |||||||||| |  ||||  |  ||||||    
T  21141075 tcctcggtcgttaactgccgtcggttttctaaaacttcggcagttaattgtcgaaggacatttaggtaaattactcgtgtgtctcagccaaaccaaatgt 21140976  T
Q  130 ataaacaacaattctcttc 148  Q
     | ||||||||||||||||    
T  21140975 gtcaacaacaattctcttc 21140957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 94461 - 94344
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| || || ||  ||||||||||||||||||||||||||||  |   | || |  ||||| ||||||| |||||||| ||||    
T  94461 tttcctcggtagttaactgcagctggatttctaaaacttcggcagttaactgccgaagggcaaaaacgtcatttactcatgtggcacagccttatcaaat 94362  T
Q  128 gtataaacaacaattctc 145  Q
    || |||||||||||||||    
T  94361 gtgtaaacaacaattctc 94344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 586626 - 586716
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||||||||||| |||||  ||||  ||||||||||||| ||||    
T  586626 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagcc 586716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 4208445 - 4208367
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||| |||||||||| |||||||  || ||| ||||||||||||||||||||||||||||  ||||| |||||||||    
T  4208445 cctcggcagttaactgcagccggttccttcaaaattcggcagttaactgccgaaggatatttgagtaaattactcgtgt 4208367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 29424432 - 29424374
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    |||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||||    
T  29424432 tttcctcggtagttaactgcagccggtttttttaaacttcggcaattaactgccgaagg 29424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 45977719 - 45977813
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttat 122  Q
    ||||||||| |||| |||   ||||||||| |||||||||||||||||||||||||| || ||||  ||||| ||||||| ||||| ||||||||    
T  45977719 tttcctcggcagtttactttcgccggtttactaaaacttcggcagttaactgccgaatgacattttcgtaaagtactcgtatggcacagccttat 45977813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 9618770 - 9618656
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| |||||||   |||   ||||||||||||||||| | | | |||| |||||| |||||||||| || ||||||||  |||    
T  9618770 tttcctcggtagttaactgcagccggttccataa---ttcggcagttaactgccaaggaacatttcggtaaattactcgtgtgacacagccttatgcaat 9618674  T
Q  128 gtataaacaacaattctc 145  Q
    || | |||||||||||||    
T  9618673 gtgtcaacaacaattctc 9618656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 31780042 - 31779963
Alignment:
Q  66 tcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    |||||||||||||||||||||  ||||  ||||| ||||| ||||||| ||||||||  ||||| |||||||||||||||    
T  31780042 tcggcagttaactgccgaagggcattttcgtaaagtactcatgtggcacagccttatgtaatgtgtaaacaacaattctc 31779963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 46217339 - 46217458
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| |||| ||| || ||||||||||| |||||||||||| || ||||  ||||| |||| ||||  |  ||||||||| |||    
T  46217339 tttcctcggtagttaactgcagccgattttttcaaacttcggcaattaactgccgaatgacattttcgtaaagtactagtgtttctcagccttattgaat 46217438  T
Q  128 gtataaacaacaattctctt 147  Q
    || ||  || ||||||||||    
T  46217439 gtgtattcagcaattctctt 46217458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 30194473 - 30194391
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||||||||||| |||||  ||||  ||||||||||    
T  30194473 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtg 30194391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 31783736 - 31783857
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactc--gtgtggcagagccttattaa 125  Q
    ||||||||| |||||||| | |||  |||| |||||||||| |||||||||| ||||||| ||||  || ||||||||  ||||| || | ||||||  |    
T  31783736 tttcctcggcagttaactaccgccaatttactaaaacttcgacagttaactgtcgaaggacattttcgttaaatactcgtgtgtgacacaaccttatgta 31783835  T
Q  126 atgtataaacaacaattctctt 147  Q
    |||| |||||||||||||||||    
T  31783836 atgtgtaaacaacaattctctt 31783857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 50343994 - 50344067
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcg 106  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||||||||| |   ||||||||||| ||||||    
T  50343994 tcgggagttaactgccgccggttttctaaaacttcggcagttaactgccgatgagcatttaggtaaattactcg 50344067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 19161944 - 19161888
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaa 84  Q
    ||||||||| |||||||||| ||||| ||  ||||||||||||||||||||||||||    
T  19161944 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaa 19161888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 46044747 - 46044799
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgc 80  Q
    |||||||||||||||||||| |||||||||| ||  |||||||||||||||||    
T  46044747 tttcctcggtagttaactgcagccggtttatgaattcttcggcagttaactgc 46044799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 3983138 - 3983047
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||| ||||||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  3983138 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 3983047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 22528655 - 22528702
Alignment:
Q  64 cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtgg 111  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||    
T  22528655 cttcggcagttaactgccgaagggaatttaggtaaattactcgtgtgg 22528702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 29438041 - 29438096
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    |||||||||||||||||||| |||||||| |||| | ||| |||||||||||||||    
T  29438041 tttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccga 29438096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 31945883 - 31945974
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||| ||||||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  31945883 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 31945974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 29425357 - 29425415
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||||||||||||||||  ||| ||| || |||||||| |||||||||||||||||    
T  29425357 tttcctcggtagttaactgcaaccgattttttcaaacttcgacagttaactgccgaagg 29425415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 585703 - 585616
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  |||   |||||||||||| |||||||||  |||| |||||| ||||| ||||||| ||||    
T  585703 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaattgccgaagggcatttgggtaaattactcctgtggcatagcc 585616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 5329174 - 5329094
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||| ||||||||||  ||||||  |||||| |||||||||||||||| ||| | ||||| |||||| || ||||||    
T  5329174 ttcctcggcagttaactgcaaccggttctttaaaatttcggcagttaactgctgaatggtatttgggtaaattattcgtgt 5329094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 13629454 - 13629370
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    |||||||||||   |||| ||||||||| | |||||||||||||||||||||||||||  |||| ||||   |||||||||||||    
T  13629454 tcctcggtagtatgctgccgccggtttactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggca 13629370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 19156065 - 19155949
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatg 128  Q
    ||||||| ||||| |||| ||| ||||| ||||| ||||  ||||||||| ||||||   |||||||||||  |||||||||||| |||||||| ||| |    
T  19156065 tcctcggaagttagctgccgccagtttactaaaaacttcaacagttaactaccgaagagcatttaggtaaatgactcgtgtggcacagccttatcaaacg 19155966  T
Q  129 tataaacaacaattctc 145  Q
    | | || ||||||||||    
T  19155965 tgtgaaaaacaattctc 19155949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 48228328 - 48228404
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||| |||||||||| ||| | ||  ||||||||||||||||||||||||||||| ||||  ||||  |||||||||    
T  48228328 tcggcagttaactgcagccagatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgt 48228404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 49426763 - 49426647
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgt 129  Q
    ||||||| |||||| ||| ||||| ||  |||||||||||| |||||||||||||||  |   | || |  ||||||||||| | |||||||| ||||||    
T  49426763 tcctcggcagttaattgcagccggatttctaaaacttcggcggttaactgccgaagggaaaacacgtcatttactcgtgtggtacagccttatcaaatgt 49426664  T
Q  130 ataaacaacaattctct 146  Q
     |||||| |||||||||    
T  49426663 gtaaacagcaattctct 49426647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 3732374 - 3732465
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||  |||| ||||||| | | ||||||||||||||||||||||||| |  |||| ||||   ||||||||||||| ||||    
T  3732374 tttcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaatggcattttggtattttactcgtgtggcacagcc 3732465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 26875745 - 26875686
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaagg 86  Q
    ||||||||| ||||| |||| ||||||| | ||||| |||||||||||||||||||||||    
T  26875745 tttcctcggcagttagctgccgccggttcactaaaaacttcggcagttaactgccgaagg 26875686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 29765550 - 29765605
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| ||||||||||  |||| ||  |||||||||||||||||||||||||    
T  29765550 tttcctcggcagttaactgcaaccggatttctaaaacttcggcagttaactgccga 29765605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 30890110 - 30889995
Alignment:
Q  31 cctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgt 129  Q
    ||||||||||   |||| ||||||||| | |||||||| ||||||||||||||||||  |||| ||||   ||||||||||||| |||| || || ||||    
T  30890110 cctcggtagtatgctgccgccggtttactcaaaacttctgcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgt 30890011  T
Q  130 ataaacaacaattctc 145  Q
       |||||||||||||    
T  30890010 gggaacaacaattctc 30889995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 37992571 - 37992649
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| ||||||||  |||   ||||||||||||||| ||| |||||||| |||||| |||| ||||    
T  37992571 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgtcgagggatatttgggtaaattactagtgt 37992649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 38119630 - 38119551
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||||||||||||| |||||| |    ||| |||| |||||||||||| |||| ||||||| |||| ||||||||||    
T  38119630 cctcggtagttaactgcagccggtatccacaaaattcgacagttaactgccaaagggtatttagataaattactcgtgtg 38119551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 38776148 - 38776239
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||| |||| ||||||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  38776148 ttcctcggtagttatctgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 38776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 51271612 - 51271667
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| | |||||||| ||||| ||  |||||||||||||||||||||||||    
T  51271612 tttcctcggcaattaactgcagccggatttctaaaacttcggcagttaactgccga 51271667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 13636143 - 13636201
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaag 85  Q
    ||||||||| |||||||||| ||||| || || |||| |||||||||||||||||||||    
T  13636143 tttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 13636201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 19914518 - 19914428
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||| ||||||||||||| ||  ||||  ||||  ||||||||||||| ||||    
T  19914518 tttcctcggcagttaactgcagccgtatttctaaaacttcggaagttaactgccgaggggcatttgagtaatttactcgtgtggcacagcc 19914428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 19924774 - 19924716
Alignment:
Q  60 aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| ||||    
T  19924774 aaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagcc 19924716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 42572788 - 42572849
Alignment:
Q  38 agttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaa 99  Q
    |||||||||| |||||||| || ||| |||| |||||||||| ||| || ||||||||||||    
T  42572788 agttaactgcagccggtttcttcaaaattcgacagttaactgtcgaggggtatttaggtaaa 42572849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 47505908 - 47505961
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    |||||| ||||||||||| |||| |||  ||||||||||||| |||||||||||    
T  47505908 tcctcgatagttaactgcagccgattttctaaaacttcggcaattaactgccga 47505961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 49429156 - 49429213
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaag 85  Q
    ||||||||| |  ||||||| ||||| ||  |||||||||||||||||||||||||||    
T  49429156 tttcctcggcaactaactgcagccggatttctaaaacttcggcagttaactgccgaag 49429213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 50036900 - 50036835
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatattt 92  Q
    |||| ||||||||||||||| ||||| || |  |||||||||||||||||||||||| ||| ||||    
T  50036900 tttcttcggtagttaactgcagccgggttctagaaaacttcggcagttaactgccgagggacattt 50036835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 3941171 - 3941223
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgc 80  Q
    |||||||||||||||||||| ||| |||||| ||  | |||||||||||||||    
T  3941171 tttcctcggtagttaactgcagccagtttatgaattcctcggcagttaactgc 3941223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 19915339 - 19915394
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||||| |||||||||| ||||||||  |||   ||||||||||||||||||||||    
T  19915339 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgaagg 19915394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 27650049 - 27650129
Alignment:
Q  65 ttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    ||||||||||||||||||| ||  |||| |||||| |||| ||||| || ||||||||  ||||| | |||||| ||||||    
T  27650049 ttcggcagttaactgccgaggggcatttcggtaaattactagtgtgacacagccttatgcaatgtgtcaacaacgattctc 27650129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 4331841 - 4331958
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||| | |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||  |||    
T  4331841 tttcctcagcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggatattttcgtaaagtactcgtgtggcacagccttatgtaat 4331940  T
Q  128 gtataaacaacaattctc 145  Q
    || |||||| ||||||||    
T  4331941 gtgtaaacagcaattctc 4331958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 42165215 - 42165097
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| | |||||||| ||||||||| ||||||||| |||| |||||||||||||  ||||  ||||||||||||||||||| |||||||| ||||    
T  42165215 tttcctcggcaattaactgccgccggtttactaaaacttcagcagctaactgccgaagggcattttcgtaaaatactcgtgtggcacagccttatcaaat 42165116  T
Q  128 gtataaacaacaattctct 146  Q
    || ||||||||||||||||    
T  42165115 gtgtaaacaacaattctct 42165097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 52391416 - 52391531
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgt 129  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||||| |||| | ||||| |||||| |||| || ||||| |||||||| ||||||    
T  52391416 tcctcggtagtta-ctgccgccggtttactaaaacttcggcagttaactgtcgaaaggtattttggtaaagtacttgtatggcacagccttatcaaatgt 52391514  T
Q  130 ataaacaacaattctct 146  Q
    |||||||||||||||||    
T  52391515 ataaacaacaattctct 52391531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 8475878 - 8475761
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||  ||||| ||||||||||||| | ||||||  |||    
T  8475878 tttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggacattttcgtaaagtactcgtgtggcacaaccttatgtaat 8475779  T
Q  128 gtataaacaacaattctc 145  Q
     | |||||| ||||||||    
T  8475778 atgtaaacagcaattctc 8475761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 42166431 - 42166549
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||||||||||||||||| || ||||  ||||| ||||||||||||| | ||||||  |||    
T  42166431 tttcctcggcagtttactgccgccggtttactaaaacttcggcagttaactgccgaatgacatttttgtaaagtactcgtgtggcacaaccttatgtaat 42166530  T
Q  128 gtataaacaacaattctct 146  Q
    || |||||| |||||||||    
T  42166531 gtgtaaacatcaattctct 42166549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 4015150 - 4015267
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||  ||||  ||||| |||||||||| || ||||||||  |||    
T  4015150 tttcctcggcagttaactcccgccggtttactaaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtgacacagccttatgtaat 4015249  T
Q  128 gtataaacaacaattctc 145  Q
    || |||||| ||||||||    
T  4015250 gtgtaaacagcaattctc 4015267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 2274946 - 2275054
Alignment:
Q  37 tagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaaca 136  Q
    |||||||| || ||||||||| |||||||| |||||||||||||| || || ||||||||||| |||||||||| || ||| |||| |||||| ||||||    
T  2274946 tagttaacggccgccggtttactaaaactttggcagttaactgcccaatgacatttaggtaaattactcgtgtgacacagctttatcaaatgtgtaaaca 2275045  T
Q  137 acaattctc 145  Q
     ||||||||    
T  2275046 gcaattctc 2275054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 7941162 - 7941081
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||| | |||||||||| |||||||  |||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  7941162 tttcctcagcagttaactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttaggtaaattactcgtgt 7941081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 14043919 - 14044036
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||||||||| |||| |||  |||||||||| ||||||||||||||||| ||||| |||||| |||||||||  |  ||||  | |||||    
T  14043919 tttcctcggcagttaactgcagccgattttctaaaacttcgacagttaactgccgaagggtatttgggtaaattactcgtgtttctcagccaaactaaat 14044018  T
Q  128 gtataaacaacaattctc 145  Q
    || |||||||||||||||    
T  14044019 gtgtaaacaacaattctc 14044036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 52387831 - 52387719
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtata 132  Q
    |||||||||||||||  |||||||| |||||||||| |||||||||||||||||  ||||  ||||||||||| ||||||| | ||||||  |||||  |    
T  52387831 tcggtagttaactgccaccggtttactaaaacttcgacagttaactgccgaagggcattttcgtaaaatactcatgtggcacaaccttatgtaatgtgca 52387732  T
Q  133 aacaacaattctc 145  Q
    |||| ||||||||    
T  52387731 aacagcaattctc 52387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 17561809 - 17561692
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgt 129  Q
    ||||||| |||||||||| ||||||||  ||||| ||||||||||||||| | | ||| ||||||||||| |||||||||| |  ||||  || ||||||    
T  17561809 tcctcgggagttaactgcagccggttttctaaaatttcggcagttaactgtcaagggacatttaggtaaattactcgtgtgtctcagccaaatcaaatgt 17561710  T
Q  130 ataaacaacaattctctt 147  Q
     | |||||||||||||||    
T  17561709 gtcaacaacaattctctt 17561692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 4008354 - 4008429
Alignment:
Q  38 agttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    |||||||||| ||||||||| ||||| |||||||||| |||||||||||  ||||  |||||||||||||||||||    
T  4008354 agttaactgccgccggtttactaaaatttcggcagtttactgccgaagggcatttttgtaaaatactcgtgtggca 4008429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 45076275 - 45076350
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgt 107  Q
    ||||| |||||||| | |||||||  |||||| |||||||||||||||||||||||||||| |||||| |||||||    
T  45076275 ctcggcagttaactacagccggttctttaaaatttcggcagttaactgccgaaggatatttgggtaaattactcgt 45076350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 27739588 - 27739678
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||||||||||| |||||  ||||  ||||||||||||| ||||    
T  27739588 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagcc 27739678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 3975785 - 3975693
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||| |||||||||| ||||||||| ||||| ||||| ||||| |||||||||||  ||||  ||||| ||||||||||||| ||||    
T  3975785 atttcctcggcagttaactgccgccggtttactaaaaacttcgacagtttactgccgaagggcattttcgtaaagtactcgtgtggcacagcc 3975693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 16611147 - 16611075
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactc 105  Q
    |||| |||||||||| ||||||||  ||||||||||| ||||||||||||||||  ||||||||||| |||||    
T  16611147 tcggcagttaactgccgccggttttctaaaacttcggtagttaactgccgaagggcatttaggtaaattactc 16611075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 16861179 - 16861099
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||||||||||||||  |||||||  |||||||||| |||||||||| ||| ||  ||||||||||| ||||||||||    
T  16861179 tcctcggtagttaactgcatccggttttctaaaacttcgacagttaactgtcgaggggcatttaggtaaattactcgtgtg 16861099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 22048106 - 22048178
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactc 105  Q
    |||| |||||||||| ||||||||  ||||||||||| ||||||||||||||||  ||||||||||| |||||    
T  22048106 tcggcagttaactgccgccggttttctaaaacttcggtagttaactgccgaagggcatttaggtaaattactc 22048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 2062438 - 2062359
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgt 107  Q
    ||||||||  |||||||||| ||| ||||  |||||||||||||||||||||||||||| ||||| | |||| |||||||    
T  2062438 tttcctcgacagttaactgcagccagttttctaaaacttcggcagttaactgccgaagggtatttggataaattactcgt 2062359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 34645576 - 34645533
Alignment:
Q  66 tcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  34645576 tcggcagttaactgccgaaggatatttaggtaaattactcgtgt 34645533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 32200245 - 32200330
Alignment:
Q  60 aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    |||||| |||||||||||||||||||| |||||| |||||  |||||||||| | | |||||| |||||| ||||||  |||||||    
T  32200245 aaaactccggcagttaactgccgaagggtatttacgtaaatgactcgtgtggtacaaccttatcaaatgtgtaaacagtaattctc 32200330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 32593133 - 32593210
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactc 105  Q
    ||||||||| |||||||||| |||||||  |||||| |||| ||||||||||||||| ||||||| | |||| |||||    
T  32593133 tttcctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccgaaagatatttggataaattactc 32593210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 41612418 - 41612338
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||||||||||||||||| |||| |||  |||||||||| |||||||||||| |  || ||||| ||||| ||||||||||    
T  41612418 tcctcggtagttaactgccgccgattttctaaaacttcgacagttaactgccaatagacatttatgtaaattactcgtgtg 41612338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 19440308 - 19440253
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| |||||||||| ||  ||||||||||||||||||||    
T  19440308 tttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccga 19440253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 34045460 - 34045369
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||  |||| ||||||| | | |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| ||||    
T  34045460 tttcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagcc 34045369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 48566422 - 48566537
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgta 130  Q
    ||||||||||||||||||| |||||| || | |||||| ||||||||||||||||   | |||| |||| ||||||| || |  ||||| |  ||||||     
T  48566422 cctcggtagttaactgctgtcggtttcttcacacttcgacagttaactgccgaagagcacttagataaattactcgtatgtctcagcctaaccaaatgtg 48566521  T
Q  131 taaacaacaattctct 146  Q
    | ||||||||||||||    
T  48566522 tcaacaacaattctct 48566537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 55385189 - 55385134
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| ||||| ||  |||||||||||||||||||||||||    
T  55385189 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 55385134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 11249545 - 11249635
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| |||   ||  ||||||||| |||||||||||||||||| |||||  ||||  ||||||||||||| ||||    
T  11249545 tttcctcggcagttaactgcagccatatttctaaaacttcagcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagcc 11249635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 12897876 - 12897786
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  |||||||||||||||||||||| || || |||||  ||||  ||||||||||||| ||||    
T  12897876 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgtgtggcacagcc 12897786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 28817022 - 28817112
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  |||||||| |||||||||||||||| || |||||  ||||  ||||||||||||| ||||    
T  28817022 tttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagcc 28817112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 30947675 - 30947761
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||||||||||||| ||||||||  | ||||| |||||||||||||||||| ||| |||||  ||||| |||| ||||||||    
T  30947675 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggca 30947761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 34543157 - 34543247
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||||||||||||||||| ||| ||||  ||||  ||||| ||||||| ||||    
T  34543157 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcatgtggcacagcc 34543247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 42900224 - 42900138
Alignment:
Q  33 tcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||| |||||||||| ||||||||| | |||||||| ||||||||||||||||||  |||| ||||   ||||||||||||| ||||    
T  42900224 tcggcagttaactgccgccggtttactcaaaacttcagcagttaactgccgaagggcattttggtattttactcgtgtggcacagcc 42900138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 50998701 - 50998791
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||| |||| |||||||||| ||||| ||  ||||||||||||||||||||||||| ||  ||||  ||||  ||||||||||||| ||||    
T  50998701 tttcttcggcagttaactgcagccggatttataaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagcc 50998791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 1294098 - 1294179
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| | |||||| || | | ||||||||||||||||||| || ||||| |||||  |||||||||    
T  1294098 tttcctcggaagttaactgcagtcggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgt 1294179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 3493631 - 3493550
Alignment:
Q  38 agttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||| |||||||| |||||| |||||||||||||||| ||| | | ||||| ||||  ||||||||||||| ||||    
T  3493631 agttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagcc 3493550  T

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Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 3497325 - 3497244
Alignment:
Q  38 agttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||| |||||||| |||||| |||||||||||||||| ||| | | ||||| ||||  ||||||||||||| ||||    
T  3497325 agttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagcc 3497244  T

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Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 16444658 - 16444574
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    |||||||||||   |||| ||||||||| | |||||||||||||||||||||||||||  |||| ||||   |||||||||||||    
T  16444658 tcctcggtagtatgctgccgccggtttactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggca 16444574  T

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Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 16647167 - 16647223
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    |||||||||| |||||||||| ||||| ||  |||||| ||||||||||||||||||    
T  16647167 atttcctcggcagttaactgcagccggatttctaaaacatcggcagttaactgccga 16647223  T

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Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 20485578 - 20485638
Alignment:
Q  49 gccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||  |||||| || ||||||||||||||||||| ||||| |||||| |||||||||    
T  20485578 gccggttctttaaaattttggcagttaactgccgaagggtatttgggtaaattactcgtgt 20485638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 26245380 - 26245265
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtat 131  Q
    ||||| |||||||||| ||||||||  |||   ||||||||||||||||||| || |||||  ||||  ||||||||||||| |||| ||| ||| ||      
T  26245380 ctcggaagttaactgcagccggtttcataa---ttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccatatcaaaagtgg 26245284  T
Q  132 aaacaacaattctcttcaa 150  Q
     ||||||||||||| ||||    
T  26245283 gaacaacaattctcatcaa 26245265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 31951304 - 31951220
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggca 113  Q
    |||||||||||||||||| ||||||||  ||||| ||||| ||||||||||| |  ||| ||||||||||| ||||  |||||||    
T  31951304 tcctcggtagttaactgccgccggttttctaaaatttcggtagttaactgccaaggggacatttaggtaaattactactgtggca 31951220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 1293429 - 1293370
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaagg 86  Q
    ||||||||| |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||    
T  1293429 tttcctcggcagttaactgccgccagtttattaaaaacttcgacagtttactgccgaagg 1293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 1835202 - 1835111
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| ||||||||||| ||| |||||||  ||||  ||||  ||||||||||||| ||||    
T  1835202 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcc 1835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 2645508 - 2645417
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||  ||||||||| ||||||||  ||||| |||||||||||||||||||| ||| ||||  ||||  |||| |||||||| ||||    
T  2645508 tttcctcggctgttaactgccgccggtttcctaaaaacttcggcagttaactgccgagggacatttgtgtaatttacttgtgtggcatagcc 2645417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 3948780 - 3948725
Alignment:
Q  29 ttcctcggtagttaactgctgccggttt-attaaaacttcggcagttaactgccga 83  Q
    ||||||||||||||||||| ||||||||  | ||||| ||||||||||||||||||    
T  3948780 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccga 3948725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 27738657 - 27738579
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||||| |||||||||| |||||||   |||   ||||||||||||||||||||||  |||| |||||| |||||||||    
T  27738657 tttcctcggcagttaactgcagccggttgcataa---ttcggcagttaactgccgaagggcatttgggtaaattactcgtgt 27738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 41803050 - 41802995
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| |||||||| | ||  ||||||||||||||||||||    
T  41803050 tttcctcggcagttaactgcagccggtttttaaattcttcggcagttaactgccga 41802995  T

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Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 43478851 - 43478906
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| ||||| ||  ||||||||| |||||||||||||||    
T  43478851 tttcctcggcagttaactgcagccggatttctaaaacttcagcagttaactgccga 43478906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 46388977 - 46388890
Alignment:
Q  60 aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctctt 147  Q
    |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| |||| || || ||||   |||| ||||||||||    
T  46388977 aaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctctt 46388890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 2271337 - 2271391
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaag 85  Q
    |||||| |||||||||| ||||| ||  |||||||||| ||||||||||||||||    
T  2271337 cctcggcagttaactgcagccggatttctaaaacttcgacagttaactgccgaag 2271391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 2647720 - 2647778
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaag 85  Q
    ||||||||| |||||||||| ||||| || || |||| |||||||||||||||||||||    
T  2647720 tttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 2647778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 14403059 - 14403109
Alignment:
Q  95 gtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    ||||||||||||||||||| ||||||||  || || |||||||||||||||    
T  14403059 gtaaaatactcgtgtggcacagccttatgtaaagtgtaaacaacaattctc 14403109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 19842556 - 19842498
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||| | |||||||||| |||| ||  |||||| ||||||||||||||||||||||    
T  19842556 tttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgaagg 19842498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 29008938 - 29008820
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttatta-aaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaa 126  Q
    ||||||||||||| | |||| ||||||| | || ||||||||| ||||||||||||||||  ||||  |||   ||||||||||||| |||| || || |    
T  29008938 tttcctcggtagtaagctgccgccggttcactacaaacttcggtagttaactgccgaagggcattttcgtattttactcgtgtggcacagccatactata 29008839  T
Q  127 tgtataaacaacaattctc 145  Q
    |||   |||||||||||||    
T  29008838 tgtgggaacaacaattctc 29008820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 34542205 - 34542132
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatact 104  Q
    ||||||||| |||||||||| ||||||||  |||   ||| ||||||||||||||||| | ||||||||||| ||||    
T  34542205 tttcctcggcagttaactgcagccggtttcataa---ttcagcagttaactgccgaagaacatttaggtaaattact 34542132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 4004824 - 4004881
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaag 85  Q
    ||||||||| |||||||||| ||||| ||  ||||||||||||| |||||| ||||||    
T  4004824 tttcctcggcagttaactgcagccggatttctaaaacttcggcaattaactaccgaag 4004881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 42904205 - 42904262
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaagg 86  Q
    ||||||| ||||| |||| ||||||| | ||||| |||||||||||||||||||||||    
T  42904205 tcctcgggagttagctgccgccggttcactaaaaacttcggcagttaactgccgaagg 42904262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 44523430 - 44523393
Alignment:
Q  73 ttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  44523430 ttaactgtcgaaggatatttaggtaaattactcgtgtg 44523393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 46702079 - 46702132
Alignment:
Q  60 aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||||||||||||||| |||||| |||| ||||   |||||||||||||    
T  46702079 aaaacttcggcagttaactgctgaaggacattttggtattttactcgtgtggca 46702132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 50481406 - 50481463
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaagg 86  Q
    ||||||||||||| |||| ||||||| | ||||| |||||||| ||||||||||||||    
T  50481406 tcctcggtagttagctgccgccggttcactaaaaacttcggcacttaactgccgaagg 50481463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 6143723 - 6143659
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatattt 92  Q
    ||||||||| |||||||||| |||||||  || ||| ||| ||| ||||||||||||||| ||||    
T  6143723 tttcctcggcagttaactgcagccggttcttttaaatttcagcaattaactgccgaaggacattt 6143659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 10658875 - 10658811
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatattt 92  Q
    ||||||||| ||||| |||| |||||||  || ||| ||||||||||||| ||||||||| ||||    
T  10658875 tttcctcggcagttagctgcagccggttcttttaaatttcggcagttaacagccgaaggacattt 10658811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 12898711 - 12898798
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| | |||||||| ||||||||  |||   ||||||||||||||| ||| ||  |||| |||||| ||||||||||||| ||||    
T  12898711 tttcctcggcaattaactgcagccggtttcataa---ttcggcagttaactgtcgaggggcatttgggtaaattactcgtgtggcatagcc 12898798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 14398519 - 14398467
Alignment:
Q  95 gtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctctt 147  Q
    |||||||||||||||| || ||||||||  || || |||||||||||||||||    
T  14398519 gtaaaatactcgtgtgacacagccttatgtaaagtgtaaacaacaattctctt 14398467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 16851141 - 16851061
Alignment:
Q  65 ttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    ||||||||||||||||||| ||  ||||  ||||| ||||||||||||| ||||  | |||||||   |||||||||||||    
T  16851141 ttcggcagttaactgccgaggggcatttgagtaaattactcgtgtggcatagccaaactaaatgtgggaacaacaattctc 16851061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 43476244 - 43476188
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttat-taaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| ||||| || | |||||||||||||||||||| ||||    
T  43476244 tttcctcggcagttaactgcagccggattttctaaaacttcggcagttaacttccga 43476188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 42912899 - 42913018
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||||||||| ||||||||| |||||||||| || |||||| |||||||  |||||  |||||||||||||||||| |||||||| ||||    
T  42912899 tttcctcggtagttaactgccgccggtttactaaaacttcgacaattaactaccgaagggcatttaaataaaatactcgtgtggcacagccttatcaaat 42912998  T
Q  128 gtataaacaacaattctctt 147  Q
    || |||||| ||||||||||    
T  42912999 gtgtaaacagcaattctctt 42913018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 30705187 - 30705069
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatg 128  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||  ||||| |||||  |||||||||||| |||||||| |||||    
T  30705187 tcctcggtagttaactgccgccggtttactaaaaacttcggcagttaactgctgaagggcatttacgtaaatgactcgtgtggcacagccttatgaaatg 30705088  T
Q  129 tataaacaacaattctctt 147  Q
    | |||||||||||||||||    
T  30705087 tgtaaacaacaattctctt 30705069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 27673674 - 27673792
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    |||||||||||||| |||| |||| |||| ||||| |||||||||||||||||| |||   ||||| |||||  |||||||||||| |||||||| ||||    
T  27673674 ttcctcggtagttagctgccgccgatttactaaaaacttcggcagttaactgccaaagagcatttacgtaaatgactcgtgtggcatagccttatcaaat 27673773  T
Q  128 gtataaacaacaattctct 146  Q
    || ||||||||||||||||    
T  27673774 gtgtaaacaacaattctct 27673792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 14683 - 14801
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaa 126  Q
    |||||||||| |||||||| | ||||  ||  ||||||||||||||||||||||||||||| ||||  ||||  ||||||||||||| | |||||| |||    
T  14683 atttcctcggcagttaactacagccgtatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgtggcacaaccttatcaaa 14782  T
Q  127 tgtataaacaacaattctc 145  Q
    ||| |||||| ||||||||    
T  14783 tgtgtaaacagcaattctc 14801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 38408490 - 38408570
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||| |||||||||| | ||||||  |||||||||||||||||| |||||||||  ||||||||||| ||||||||||    
T  38408490 tcctcgggagttaactgccgtcggttttctaaaacttcggcagttaattgccgaagggcatttaggtaaattactcgtgtg 38408570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 13837776 - 13837685
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||| ||||| ||||||||||| |||||||||||  ||||  ||||| ||||||||||||| ||||    
T  13837776 tttcctcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaagggcatttttgtaaagtactcgtgtggcacagcc 13837685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 11027145 - 11027028
Alignment:
Q  30 tcctcggtagttaactgctgccggttta-ttaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatg 128  Q
    |||| |||||||  |||| ||||||||| |||||||||||||||||||||||||||||  |||| ||||   ||||||||||||| |||| || || |||    
T  11027145 tccttggtagtttgctgccgccggtttacttaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatg 11027046  T
Q  129 tataaacaacaattctct 146  Q
    |   ||||||||||||||    
T  11027045 tgggaacaacaattctct 11027028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 13838445 - 13838526
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||||||||||||||||| |||||||| || | | ||||||||||||||||||| || ||||| |||||  |||||||||    
T  13838445 tttcctcggtagttaactgcagccggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgt 13838526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 8680301 - 8680381
Alignment:
Q  65 ttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    ||||||||||||||||||||||  |||| |||||| |||||||||| || ||||||||  ||||| | |||||||||||||    
T  8680301 ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtgacacagccttatgcaatgtgtcaacaacaattctc 8680381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 41623071 - 41623150
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||||| |||| ||||| |||||||  |||||| |||||||||||||||||||||| ||||| |||||| ||| |||||    
T  41623071 tcctcggcagtttactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttgggtaaattacccgtgt 41623150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 3891535 - 3891445
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||  ||  ||||||||||||||||||||||||| || |||||  ||||  ||||||||||||| ||||    
T  3891535 tttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagcc 3891445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 11033485 - 11033574
Alignment:
Q  30 tcctcggtagttaactgctgccggtttatt-aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||  |||| ||||||||| | |||||||||||||||||||||||||||| |||| ||||   ||||| ||||||| ||||    
T  11033485 tcctcggtagtttgctgccgccggtttactcaaaacttcggcagttaactgccgaaggacattttggtattttactcatgtggcacagcc 11033574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 8539537 - 8539601
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatattt 92  Q
    ||||||||| |||||||||| ||||| ||  ||||||||||||||||||||||||| || |||||    
T  8539537 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggggtattt 8539601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 20744015 - 20744069
Alignment:
Q  29 ttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    |||||||| |||||||||| |||| ||  ||||||||||||||||||||||||||    
T  20744015 ttcctcggcagttaactgcagccgattctttaaaacttcggcagttaactgccga 20744069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 30192544 - 30192486
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaagg 86  Q
    ||||||||  |||||||||| |||||||  |||||| ||||||||||||||||||||||    
T  30192544 tttcctcgacagttaactgcagccggttctttaaaatttcggcagttaactgccgaagg 30192486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 18512673 - 18512730
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaag 85  Q
    ||||||||| |||||||||| ||||||||    |||||||||||||||||||||||||    
T  18512673 tttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgaag 18512730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 28241853 - 28241938
Alignment:
Q  60 aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    ||||||||||||||||||||||||||| ||||| | ||   ||||||||||||| |||| || || ||||   |||||||||||||    
T  28241853 aaaacttcggcagttaactgccgaagggtattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 28241938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 2170576 - 2170640
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatattt 92  Q
    ||||||||| |||||||||| |||||||  |||||| ||||  ||||||||| ||||||||||||    
T  2170576 tttcctcggcagttaactgcagccggttctttaaaatttcgatagttaactgtcgaaggatattt 2170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 5200379 - 5200459
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||| |||||||||| |||| |||  |||||||||| ||||||||| |||| | | ||||||||||| |||| |||||    
T  5200379 tcctcgggagttaactgcagccgattttctaaaacttcgacagttaactaccgatgaacatttaggtaaattacttgtgtg 5200459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 38855732 - 38855788
Alignment:
Q  28 tttcctcggtagttaactgctgccggttta-ttaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| ||||||||  || |||||||||||||||||||||||    
T  38855732 tttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccga 38855788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 3892461 - 3892543
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||| |||||||||| ||||||||  |||   ||||||||||||||||||| ||| ||||  ||||  |||||||||||||    
T  3892461 tttcctcggcagttaactgcagccggtttcataa---ttcggcagttaactgccgagggacatttgagtaatttactcgtgtggca 3892543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 7757377 - 7757326
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactg 79  Q
    ||||||||| |||||||||| ||||| ||  |||||||||||||||||||||    
T  7757377 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactg 7757326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 11348496 - 11348551
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||| ||||||||||  |||| ||  |||||||||||||||||||||||||    
T  11348496 tttcctcggcagttaactgcatccggatttctaaaacttcggcagttaactgccga 11348551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 43094597 - 43094648
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactg 79  Q
    ||||||||| |||||||||| ||||| ||  |||||||||||||||||||||    
T  43094597 tttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactg 43094648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 28388608 - 28388658
Alignment:
Q  95 gtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    ||||||||||||||||||| ||||||||  || || |||||||||||||||    
T  28388608 gtaaaatactcgtgtggcacagccttatgtaaagtgtaaacaacaattctc 28388658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 35564310 - 35564232
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    |||||| | |||||||| || ||||  || ||| ||||||||||||||||||||| ||||||  ||||| |||||||||    
T  35564310 cctcggcaattaactgcagctggttccttcaaaattcggcagttaactgccgaagaatatttgagtaaattactcgtgt 35564232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 38853498 - 38853440
Alignment:
Q  60 aaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||||||||||||||||||||  |||| ||||   ||||||||||||| ||||    
T  38853498 aaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagcc 38853440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 42942471 - 42942525
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgcc 81  Q
    |||||||||| |||||| ||| || |||||  |||||||||||||||||||||||    
T  42942471 atttcctcggcagttaattgccgctggttttctaaaacttcggcagttaactgcc 42942525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 11029024 - 11029081
Alignment:
Q  27 atttcctcggtagttaactgctgccggttta-ttaaaacttcggcagttaactgccga 83  Q
    |||||||||| |||||||||| |||||||   || |||||||||||||||||||||||    
T  11029024 atttcctcggcagttaactgccgccggttgccttcaaacttcggcagttaactgccga 11029081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 38971649 - 38971726
Alignment:
Q  33 tcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||| |||||||||| ||||||||    ||| ||||| ||||||||||||||||  ||||||||||| || |||||||    
T  38971649 tcggcagttaactgcagccggtttccacaaaattcgggagttaactgccgaagggcatttaggtaaattagtcgtgtg 38971726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 14279902 - 14279810
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccga-aggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||| |||||||||| ||||||||  ||||| | |||| ||||||||||||| ||| |||||  ||||| |||| |||||||| ||||    
T  14279902 tttcctcgggagttaactgccgccggtttcctaaaaacctcggtagttaactgccgagagggtatttgcgtaaattactggtgtggcacagcc 14279810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 42937245 - 42937189
Alignment:
Q  27 atttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||| |||| |||||||||| ||||||||  | ||||||||||||||||| |||||    
T  42937245 atttcttcggcagttaactgccgccggttttcttaaacttcggcagttaaccgccga 42937189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 15643 - 15728
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||| ||||  ||||| |||||||||||||    
T  15643 tttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgccgaaggacattttcgtaaagtactcgtgtggca 15728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 236281 - 236396
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaat 127  Q
    ||||||||| |||| ||||| ||| ||||| ||||||||||||||||||| ||||||||  ||||  ||||| ||||||||||||| ||||||||  |||    
T  236281 tttcctcggcagtttactgccgccagtttactaaaacttcggcagttaaccgccgaagggcattttcgtaaagtactcgtgtggcacagccttatataat 236380  T
Q  128 gtataaacaacaattc 143  Q
    || ||| || ||||||    
T  236381 gtgtaatcagcaattc 236396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 235946 - 235867
Alignment:
Q  66 tcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctc 145  Q
    |||||||||||||| ||||||  ||||  |||||||||||||||| || ||||||||  ||||| |||||||||||||||    
T  235946 tcggcagttaactgtcgaagggcattttcgtaaaatactcgtgtgacacagccttatgtaatgtgtaaacaacaattctc 235867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 11476 - 11565
Alignment:
Q  30 tcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||| | |||| ||||||||| ||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||| ||||    
T  11476 tcctcggtagtaagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagcc 11565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 5383 - 5327
Alignment:
Q  28 tttcctcggtagttaactgctgccggttta-ttaaaacttcggcagttaactgccga 83  Q
    ||||||||| |||||||||| ||||||||  || |||||||||||||||||||||||    
T  5383 tttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccga 5327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 10701 - 10622
Alignment:
Q  31 cctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||| |||||||||  ||||| ||||  ||||||||||    
T  10701 cctcggcagttaactgccgccggtttactaaaacttcggcagttaattgccgaagggcatttaagtaatttactcgtgtg 10622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 12409 - 12466
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaag 85  Q
    |||| |||| |||||||||| ||||| ||  |||||||||||||||||||||||||||    
T  12409 tttcatcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaag 12466  T

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Target: scaffold0504 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 12434 - 12349
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggca 113  Q
    ||||||||| |||||| ||| ||||||||| ||||| |||| |||||||||||||||||  ||||  ||||| |||||||||||||    
T  12434 tttcctcggcagttaattgccgccggtttactaaaatttcgacagttaactgccgaagggcatttttgtaaagtactcgtgtggca 12349  T

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Target: scaffold0634 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 7470 - 7387
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaa-cttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtg 110  Q
    ||||||||||||| |||||| ||||| ||| ||||| ||||||||||| |||||||||||  ||||  ||||| ||||||||||    
T  7470 tttcctcggtagtcaactgccgccgggttactaaaaacttcggcagtttactgccgaagggcattttcgtaaagtactcgtgtg 7387  T

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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 41080 - 41168
Alignment:
Q  31 cctcggtagttaactgctgccggtttatta-aaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    |||||||||| | |||| ||||||||| || ||||||||| |||||||||||||||| |||||  |||   ||||||||||||| ||||    
T  41080 cctcggtagtaagctgccgccggtttactacaaacttcggtagttaactgccgaagggtattttagtattttactcgtgtggcacagcc 41168  T

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Target: scaffold1379 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 455 - 510
Alignment:
Q  28 tttcctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccga 83  Q
    ||||||||  |||||||||| ||||| |||||||  ||||||||||||||||||||    
T  455 tttcctcgacagttaactgcagccggattattaattcttcggcagttaactgccga 510  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 69273 - 69332
Alignment:
Q  59 taaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgtggcagagcc 118  Q
    ||||||||||||||||||||||||| || |||||  ||||  ||||||||||||| ||||    
T  69273 taaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagcc 69332  T

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Target: scaffold0283 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 1638 - 1715
Alignment:
Q  32 ctcggtagttaactgctgccggtttattaaaacttcggcagttaactgccgaaggatatttaggtaaaatactcgtgt 109  Q
    ||||| ||||||||||  ||| |||  |||||||||  ||||||||||||||| ||||||||  |||| |||||||||    
T  1638 ctcggcagttaactgcaaccgattttctaaaacttcaacagttaactgccgaaagatatttaaataaattactcgtgt 1715  T

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Target: scaffold0340 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 19213 - 19161
Alignment:
Q  95 gtaaaatactcgtgtggcagagccttattaaatgtataaacaacaattctctt 147  Q
    |||| |||||||||||||| ||||||||  || || |||||||||||||||||    
T  19213 gtaatatactcgtgtggcacagccttatgtaaagtgtaaacaacaattctctt 19161  T

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