View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16684_high_5 (Length: 294)
Name: NF16684_high_5
Description: NF16684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16684_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 44646809 - 44646528
Alignment:
| Q |
1 |
tttattttccatttgcaaaactagtacactgaaaaagttatattaggattattggctttgtatgtgcttatgactgattattaactatgatcacaaaatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44646809 |
tttattttccatttgcaaaactagtacactgaaaaagttatattaggattattggctttgtatgtgcttatgactgattattaactatgatcacaaaatt |
44646710 |
T |
|
| Q |
101 |
gttgaaatatctatctatttatactatttaatttctgaagcgcctgcgattggatttatcatatattttctgaaggcagaaagtgcctcctccgattcct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44646709 |
gttgaaatatctatctatttatactatttaatttctgaaccgcctgcgattggatttatcatatattttctgaaggcagaaagtgcctcctccgattcct |
44646610 |
T |
|
| Q |
201 |
aacactttctgccttctccgattccttgacggctctctcacactattttaataatctgaatgtgaagaaaaccagcctttgc |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44646609 |
aacactttctgccttctccgattccttgacggctctctcacactattttaataatctgaatgtgaagaaaaccagcctttgc |
44646528 |
T |
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