View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16684_high_7 (Length: 290)
Name: NF16684_high_7
Description: NF16684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16684_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 17 - 279
Target Start/End: Original strand, 52584642 - 52584904
Alignment:
| Q |
17 |
tttttgtctgagagaaagtgattgaaaaaataaactagttctatacttgtattgtattgtgtcccttaagggaacaactcaattggaaaaatgaagcatg |
116 |
Q |
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| T |
52584642 |
tttttgtctgagagaaagtgattgaataaataaactagttctatacttgtattgtattgtgtcccttaagggaacaactcaattggaaaaatgaagcatg |
52584741 |
T |
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| Q |
117 |
tgagttttgtgatgtggatctctctagaacagtgaaagaagagagatttttatggaaaaagagaaaaggagtgaaagggggaatcgaatcgaatcgaatc |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
52584742 |
tgagttttgtgatgtggatctctctagaacagtgaaagaagagagatttttatggaaaaggagaaaaggagtgaaagggggaatcgaatcgaatcgaatc |
52584841 |
T |
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| Q |
217 |
aacactgttttttacgtactgaagaaactatttgagcaaaaaagctagtatagtatatattct |
279 |
Q |
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| T |
52584842 |
aacactgttttttacgtactgaagaaactatttgagcaaaaaagctagtatagtatatattct |
52584904 |
T |
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