View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16684_low_14 (Length: 223)

Name: NF16684_low_14
Description: NF16684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16684_low_14
NF16684_low_14
[»] chr6 (25 HSPs)
chr6 (4-205)||(31937506-31937707)
chr6 (76-127)||(15590126-15590177)
chr6 (1-62)||(15590164-15590225)
chr6 (4-55)||(8693748-8693799)
chr6 (76-131)||(31937466-31937520)
chr6 (4-54)||(23654233-23654283)
chr6 (79-131)||(14783221-14783273)
chr6 (79-124)||(6419908-6419953)
chr6 (4-61)||(12481458-12481515)
chr6 (4-52)||(14783259-14783307)
chr6 (79-131)||(21507858-21507910)
chr6 (4-55)||(4085000-4085051)
chr6 (76-130)||(8693704-8693761)
chr6 (76-131)||(12481417-12481472)
chr6 (4-55)||(21507896-21507947)
chr6 (77-130)||(6296297-6296351)
chr6 (77-130)||(6303107-6303161)
chr6 (4-61)||(6419946-6420003)
chr6 (78-113)||(4921930-4921965)
chr6 (76-106)||(2304857-2304887)
chr6 (76-106)||(23638165-23638195)
chr6 (5-55)||(35219992-35220042)
chr6 (76-109)||(15057722-15057755)
chr6 (77-113)||(4393807-4393843)
chr6 (76-124)||(19402855-19402903)
[»] chr5 (43 HSPs)
chr5 (77-130)||(42609164-42609217)
chr5 (4-55)||(7771894-7771945)
chr5 (76-131)||(17699572-17699627)
chr5 (1-52)||(34431045-34431096)
chr5 (4-62)||(17699528-17699586)
chr5 (4-61)||(17331304-17331361)
chr5 (1-54)||(42609127-42609180)
chr5 (79-132)||(43493890-43493943)
chr5 (76-131)||(32347761-32347817)
chr5 (2-62)||(32347801-32347861)
chr5 (76-128)||(34431082-34431134)
chr5 (76-131)||(17331347-17331402)
chr5 (76-127)||(27241087-27241138)
chr5 (76-131)||(33164515-33164570)
chr5 (76-131)||(39179875-39179930)
chr5 (76-113)||(3740394-3740431)
chr5 (76-113)||(17096286-17096323)
chr5 (76-124)||(6635276-6635324)
chr5 (76-111)||(12891715-12891750)
chr5 (76-111)||(28040668-28040703)
chr5 (4-55)||(29097771-29097822)
chr5 (76-131)||(29097808-29097863)
chr5 (4-55)||(43493854-43493905)
chr5 (3-61)||(17096329-17096387)
chr5 (4-54)||(26295146-26295196)
chr5 (4-62)||(28040604-28040662)
chr5 (79-132)||(178156-178209)
chr5 (4-61)||(33164556-33164613)
chr5 (79-128)||(42396562-42396611)
chr5 (79-131)||(12439684-12439736)
chr5 (78-130)||(17687225-17687277)
chr5 (76-124)||(18653808-18653856)
chr5 (4-59)||(981113-981168)
chr5 (76-131)||(3079352-3079407)
chr5 (4-55)||(6281026-6281077)
chr5 (4-55)||(20483168-20483218)
chr5 (4-55)||(27241046-27241097)
chr5 (77-127)||(6281067-6281117)
chr5 (4-62)||(23882204-23882262)
chr5 (77-131)||(26295106-26295160)
chr5 (5-62)||(3740333-3740390)
chr5 (80-113)||(39531454-39531487)
chr5 (76-131)||(20483204-20483260)
[»] chr8 (46 HSPs)
chr8 (1-61)||(30026973-30027033)
chr8 (3-61)||(24699806-24699864)
chr8 (76-130)||(14600753-14600807)
chr8 (76-130)||(30026935-30026989)
chr8 (4-61)||(7583860-7583917)
chr8 (76-121)||(10147976-10148021)
chr8 (1-54)||(14600791-14600844)
chr8 (2-54)||(9501572-9501624)
chr8 (76-127)||(9501612-9501664)
chr8 (79-131)||(10338880-10338932)
chr8 (76-128)||(12329648-12329700)
chr8 (79-131)||(31308167-31308219)
chr8 (76-131)||(3204811-3204866)
chr8 (4-55)||(24791264-24791315)
chr8 (79-130)||(37128544-37128595)
chr8 (4-55)||(37612635-37612686)
chr8 (76-126)||(39067744-39067794)
chr8 (79-128)||(2234528-2234577)
chr8 (3-55)||(10147928-10147980)
chr8 (4-56)||(10338918-10338970)
chr8 (79-131)||(37612672-37612724)
chr8 (4-55)||(1810315-1810366)
chr8 (79-130)||(23971152-23971203)
chr8 (4-55)||(31202440-31202491)
chr8 (4-55)||(31407844-31407895)
chr8 (4-55)||(41361714-41361765)
chr8 (76-131)||(41361751-41361806)
chr8 (76-130)||(1039948-1040002)
chr8 (76-130)||(24791223-24791277)
chr8 (76-121)||(1810275-1810320)
chr8 (77-126)||(13570782-13570831)
chr8 (76-121)||(24699861-24699906)
chr8 (79-132)||(31407806-31407859)
chr8 (4-52)||(1039989-1040037)
chr8 (76-111)||(7579910-7579945)
chr8 (4-62)||(12329601-12329659)
chr8 (76-106)||(31202502-31202532)
chr8 (4-57)||(2234566-2234619)
chr8 (76-113)||(22787529-22787566)
chr8 (4-53)||(30039428-30039476)
chr8 (76-124)||(2025264-2025312)
chr8 (4-52)||(3204852-3204899)
chr8 (76-124)||(4757191-4757239)
chr8 (19-55)||(11161864-11161900)
chr8 (76-128)||(15288853-15288905)
chr8 (76-128)||(15469222-15469274)
[»] chr2 (63 HSPs)
chr2 (4-64)||(20561220-20561280)
chr2 (76-131)||(18089439-18089494)
chr2 (4-55)||(43474216-43474267)
chr2 (4-62)||(11937947-11938005)
chr2 (4-62)||(28261981-28262039)
chr2 (76-130)||(32314462-32314516)
chr2 (4-62)||(33012052-33012110)
chr2 (79-131)||(44942304-44942356)
chr2 (76-131)||(13740707-13740762)
chr2 (76-130)||(31908863-31908917)
chr2 (76-130)||(43474175-43474229)
chr2 (78-131)||(34416810-34416863)
chr2 (1-62)||(44942260-44942321)
chr2 (76-128)||(12704709-12704761)
chr2 (76-124)||(17268171-17268219)
chr2 (79-131)||(27095724-27095776)
chr2 (78-130)||(33012097-33012149)
chr2 (4-55)||(5754270-5754321)
chr2 (4-55)||(12704669-12704720)
chr2 (4-55)||(32015202-32015253)
chr2 (76-127)||(35333528-35333579)
chr2 (76-130)||(4426705-4426759)
chr2 (1-55)||(18089477-18089531)
chr2 (4-54)||(25067835-25067885)
chr2 (79-131)||(11937908-11937961)
chr2 (76-113)||(13879053-13879090)
chr2 (76-113)||(14019178-14019215)
chr2 (78-131)||(15919893-15919946)
chr2 (4-61)||(27095681-27095738)
chr2 (76-124)||(4604354-4604402)
chr2 (79-131)||(5754307-5754359)
chr2 (79-131)||(9690023-9690075)
chr2 (79-131)||(22597154-22597206)
chr2 (76-111)||(10287053-10287088)
chr2 (19-62)||(12891192-12891235)
chr2 (4-55)||(15919856-15919907)
chr2 (76-131)||(20561179-20561234)
chr2 (76-131)||(25067871-25067926)
chr2 (1-52)||(31908901-31908952)
chr2 (4-55)||(36867990-36868041)
chr2 (76-127)||(38535352-38535403)
chr2 (4-62)||(7073036-7073094)
chr2 (4-62)||(9690061-9690119)
chr2 (3-61)||(13879101-13879159)
chr2 (3-61)||(14019226-14019284)
chr2 (76-130)||(28231144-28231198)
chr2 (4-61)||(4604395-4604452)
chr2 (4-61)||(22597111-22597168)
chr2 (4-60)||(9978757-9978813)
chr2 (76-124)||(34963113-34963161)
chr2 (76-131)||(4739348-4739403)
chr2 (19-62)||(38535408-38535451)
chr2 (83-113)||(4732108-4732138)
chr2 (76-126)||(9978716-9978766)
chr2 (77-131)||(34470985-34471039)
chr2 (77-127)||(36868031-36868081)
chr2 (79-133)||(38384492-38384546)
chr2 (4-61)||(17268212-17268269)
chr2 (4-61)||(41797591-41797648)
chr2 (76-128)||(7072995-7073047)
chr2 (4-52)||(13740748-13740795)
chr2 (19-55)||(28231200-28231236)
chr2 (4-52)||(35333490-35333538)
[»] chr1 (43 HSPs)
chr1 (76-132)||(7995607-7995663)
chr1 (4-62)||(33487118-33487176)
chr1 (76-131)||(424338-424393)
chr1 (76-131)||(3232807-3232862)
chr1 (4-55)||(20411555-20411606)
chr1 (4-55)||(32784090-32784141)
chr1 (76-131)||(32784127-32784182)
chr1 (4-62)||(7995648-7995706)
chr1 (77-127)||(37822393-37822443)
chr1 (76-130)||(44517167-44517221)
chr1 (4-61)||(424379-424436)
chr1 (4-61)||(12871597-12871654)
chr1 (4-56)||(13488624-13488676)
chr1 (4-55)||(28678218-28678269)
chr1 (4-55)||(33939090-33939141)
chr1 (4-62)||(3232763-3232821)
chr1 (78-131)||(45193675-45193729)
chr1 (78-131)||(42276375-42276428)
chr1 (1-61)||(17347575-17347634)
chr1 (79-131)||(33487080-33487132)
chr1 (76-111)||(4882406-4882441)
chr1 (76-123)||(14265311-14265358)
chr1 (76-131)||(27534718-27534773)
chr1 (79-130)||(28678180-28678231)
chr1 (4-55)||(29205267-29205318)
chr1 (76-127)||(29205308-29205359)
chr1 (77-131)||(4871074-4871128)
chr1 (4-54)||(42490876-42490926)
chr1 (4-61)||(18343590-18343647)
chr1 (4-61)||(27534675-27534732)
chr1 (1-62)||(42276332-42276392)
chr1 (82-131)||(42490912-42490961)
chr1 (2-62)||(45750453-45750512)
chr1 (76-124)||(51418040-51418087)
chr1 (76-111)||(10627039-10627074)
chr1 (76-111)||(29726643-29726678)
chr1 (4-62)||(4882447-4882505)
chr1 (76-130)||(17347618-17347672)
chr1 (76-130)||(20411593-20411647)
chr1 (78-111)||(12871660-12871693)
chr1 (13-54)||(13869627-13869667)
chr1 (4-61)||(14265260-14265317)
chr1 (79-111)||(45750517-45750549)
[»] scaffold0056 (2 HSPs)
scaffold0056 (76-130)||(74184-74238)
scaffold0056 (4-62)||(74139-74197)
[»] chr7 (63 HSPs)
chr7 (4-62)||(46026117-46026175)
chr7 (4-62)||(48304483-48304541)
chr7 (76-132)||(5684383-5684439)
chr7 (76-132)||(5709433-5709489)
chr7 (76-131)||(11833038-11833093)
chr7 (76-131)||(17473770-17473825)
chr7 (76-131)||(17579389-17579444)
chr7 (76-131)||(28664959-28665014)
chr7 (4-62)||(1281225-1281283)
chr7 (76-130)||(10094461-10094515)
chr7 (76-129)||(15674659-15674712)
chr7 (79-128)||(32740775-32740824)
chr7 (4-57)||(36719629-36719682)
chr7 (1-53)||(6667379-6667431)
chr7 (2-62)||(21990636-21990696)
chr7 (76-131)||(21990680-21990736)
chr7 (4-60)||(27535433-27535489)
chr7 (76-132)||(39533022-39533078)
chr7 (79-131)||(45457606-45457658)
chr7 (4-55)||(9785299-9785350)
chr7 (4-55)||(10574363-10574414)
chr7 (4-55)||(17473811-17473862)
chr7 (76-131)||(17509251-17509306)
chr7 (76-131)||(17543908-17543963)
chr7 (4-55)||(17579352-17579403)
chr7 (76-127)||(21603485-21603536)
chr7 (76-131)||(42603816-42603871)
chr7 (76-127)||(42644699-42644750)
chr7 (76-131)||(43847089-43847144)
chr7 (76-129)||(6667416-6667470)
chr7 (76-126)||(9720021-9720071)
chr7 (4-62)||(40761564-40761622)
chr7 (76-113)||(3266425-3266462)
chr7 (79-128)||(9785339-9785388)
chr7 (4-61)||(28665000-28665057)
chr7 (79-131)||(36579362-36579414)
chr7 (4-52)||(36579400-36579448)
chr7 (4-55)||(5684347-5684398)
chr7 (4-55)||(5709397-5709448)
chr7 (4-55)||(45457644-45457695)
chr7 (79-130)||(46026079-46026130)
chr7 (76-130)||(2622612-2622666)
chr7 (5-55)||(22747596-22747646)
chr7 (13-55)||(41287939-41287981)
chr7 (4-54)||(42603857-42603907)
chr7 (76-113)||(41287995-41288032)
chr7 (4-56)||(2622574-2622625)
chr7 (82-130)||(27535476-27535524)
chr7 (4-56)||(39533063-39533115)
chr7 (79-123)||(45482091-45482135)
chr7 (79-130)||(1281187-1281238)
chr7 (76-131)||(10574400-10574455)
chr7 (4-62)||(11832993-11833052)
chr7 (4-59)||(21954907-21954961)
chr7 (4-62)||(17509292-17509349)
chr7 (4-62)||(17543865-17543922)
chr7 (79-113)||(22747558-22747592)
chr7 (76-122)||(32643040-32643086)
chr7 (4-62)||(42644651-42644709)
chr7 (76-130)||(48304442-48304496)
chr7 (79-124)||(24320273-24320318)
chr7 (4-61)||(24988443-24988499)
chr7 (4-53)||(45482048-45482097)
[»] chr3 (55 HSPs)
chr3 (76-130)||(54239073-54239127)
chr3 (5-62)||(30156378-30156435)
chr3 (4-55)||(53155526-53155577)
chr3 (76-126)||(14585486-14585536)
chr3 (1-59)||(19645199-19645257)
chr3 (76-130)||(19645241-19645295)
chr3 (4-62)||(31462842-31462900)
chr3 (4-61)||(1074989-1075046)
chr3 (79-132)||(3456961-3457014)
chr3 (4-61)||(11819059-11819116)
chr3 (4-61)||(32080850-32080907)
chr3 (1-62)||(34960951-34961012)
chr3 (4-53)||(53402614-53402663)
chr3 (79-131)||(4206569-4206621)
chr3 (79-127)||(34960916-34960964)
chr3 (79-127)||(35174727-35174775)
chr3 (76-131)||(36691854-36691909)
chr3 (4-55)||(48400881-48400932)
chr3 (76-130)||(22484985-22485039)
chr3 (76-130)||(27189449-27189503)
chr3 (76-130)||(36624749-36624803)
chr3 (4-62)||(36624790-36624848)
chr3 (4-54)||(40013371-40013421)
chr3 (79-128)||(31270348-31270397)
chr3 (4-61)||(36691895-36691952)
chr3 (2-55)||(40883963-40884016)
chr3 (76-113)||(41868349-41868386)
chr3 (4-61)||(48652536-48652593)
chr3 (76-128)||(31462801-31462853)
chr3 (79-127)||(49628145-49628193)
chr3 (76-127)||(24483733-24483784)
chr3 (4-55)||(31270308-31270359)
chr3 (76-131)||(48652495-48652550)
chr3 (4-62)||(3456918-3456976)
chr3 (4-62)||(13702068-13702126)
chr3 (76-126)||(38527287-38527337)
chr3 (3-61)||(39610180-39610238)
chr3 (79-113)||(39610249-39610283)
chr3 (76-113)||(13702027-13702064)
chr3 (76-109)||(40013327-40013360)
chr3 (76-128)||(40883923-40883976)
chr3 (79-128)||(53155488-53155537)
chr3 (79-131)||(11819102-11819154)
chr3 (79-111)||(30156340-30156372)
chr3 (4-55)||(4206607-4206658)
chr3 (76-131)||(32080809-32080864)
chr3 (76-131)||(55090638-55090693)
chr3 (77-111)||(4817886-4817920)
chr3 (4-62)||(14585437-14585495)
chr3 (76-106)||(34103772-34103802)
chr3 (4-54)||(48854889-48854939)
chr3 (17-54)||(19861386-19861423)
chr3 (4-61)||(55090679-55090736)
chr3 (78-113)||(2147763-2147799)
chr3 (79-127)||(48400922-48400970)
[»] chr4 (66 HSPs)
chr4 (79-131)||(7060343-7060395)
chr4 (79-131)||(22757113-22757165)
chr4 (4-55)||(394362-394413)
chr4 (4-55)||(26742551-26742602)
chr4 (76-131)||(51152144-51152199)
chr4 (1-59)||(20399988-20400046)
chr4 (77-131)||(24825668-24825722)
chr4 (81-131)||(31522001-31522051)
chr4 (76-129)||(20399950-20400003)
chr4 (77-130)||(24100159-24100212)
chr4 (78-127)||(43244430-43244479)
chr4 (79-131)||(43493337-43493389)
chr4 (76-131)||(394321-394376)
chr4 (81-128)||(13965582-13965629)
chr4 (76-131)||(29268824-29268879)
chr4 (4-55)||(31521964-31522015)
chr4 (4-55)||(43244469-43244520)
chr4 (76-131)||(50801236-50801291)
chr4 (76-130)||(478059-478113)
chr4 (4-62)||(7060299-7060357)
chr4 (77-127)||(7083864-7083914)
chr4 (76-126)||(13586288-13586338)
chr4 (76-130)||(19745409-19745463)
chr4 (76-130)||(19794343-19794397)
chr4 (4-62)||(22757069-22757127)
chr4 (4-62)||(24568801-24568859)
chr4 (76-130)||(26742510-26742564)
chr4 (79-124)||(44757092-44757137)
chr4 (4-61)||(44757130-44757187)
chr4 (76-132)||(6911698-6911754)
chr4 (4-52)||(13965545-13965593)
chr4 (77-113)||(24611847-24611883)
chr4 (76-132)||(25658185-25658241)
chr4 (77-113)||(29922874-29922910)
chr4 (4-55)||(51152107-51152158)
chr4 (4-55)||(478100-478150)
chr4 (76-127)||(7861252-7861303)
chr4 (4-55)||(8712512-8712563)
chr4 (4-55)||(19745371-19745422)
chr4 (4-55)||(19794384-19794435)
chr4 (78-128)||(22049453-22049504)
chr4 (4-55)||(24100121-24100172)
chr4 (4-55)||(27394812-27394863)
chr4 (76-111)||(39837634-39837669)
chr4 (2-49)||(45351158-45351205)
chr4 (2-49)||(45360637-45360684)
chr4 (4-62)||(626635-626693)
chr4 (76-130)||(24568760-24568814)
chr4 (76-126)||(39523433-39523483)
chr4 (83-128)||(2447822-2447867)
chr4 (76-113)||(6881993-6882030)
chr4 (78-130)||(12717166-12717219)
chr4 (10-50)||(20887849-20887889)
chr4 (79-131)||(26674391-26674443)
chr4 (76-124)||(30202064-30202112)
chr4 (79-131)||(38944197-38944249)
chr4 (4-55)||(6911662-6911713)
chr4 (79-126)||(8712554-8712601)
chr4 (4-55)||(11210401-11210452)
chr4 (19-62)||(39837569-39837612)
chr4 (4-62)||(26674347-26674405)
chr4 (76-113)||(8517503-8517540)
chr4 (4-57)||(22049493-22049545)
chr4 (76-131)||(45351117-45351174)
chr4 (76-131)||(45360596-45360653)
chr4 (76-120)||(626596-626639)
[»] scaffold0321 (2 HSPs)
scaffold0321 (76-131)||(7171-7226)
scaffold0321 (4-37)||(7212-7245)
[»] scaffold0312 (2 HSPs)
scaffold0312 (76-131)||(6156-6211)
scaffold0312 (4-61)||(6113-6170)
[»] scaffold0155 (2 HSPs)
scaffold0155 (4-54)||(35065-35115)
scaffold0155 (82-130)||(35102-35150)
[»] scaffold0121 (2 HSPs)
scaffold0121 (3-54)||(13336-13387)
scaffold0121 (76-111)||(13292-13327)
[»] scaffold1379 (3 HSPs)
scaffold1379 (78-128)||(1135-1185)
scaffold1379 (4-61)||(1174-1231)
scaffold1379 (79-124)||(1-46)
[»] scaffold0536 (2 HSPs)
scaffold0536 (76-131)||(2919-2976)
scaffold0536 (3-55)||(2882-2934)
[»] scaffold0001 (2 HSPs)
scaffold0001 (76-112)||(404305-404341)
scaffold0001 (4-62)||(404346-404404)
[»] scaffold0432 (2 HSPs)
scaffold0432 (76-124)||(2464-2512)
scaffold0432 (19-55)||(2519-2555)
[»] scaffold0294 (2 HSPs)
scaffold0294 (79-113)||(4117-4151)
scaffold0294 (21-61)||(4171-4211)


Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 31937506 - 31937707
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaacaaacgnnnnnnncagaaaatatgtgaaatcacttattcaa 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||    
T  31937506 aaaaacaattcggaggggtgatttttgggtcaaaactgaccctaaatcacccttctgaacaaacgaaaaaaacagaaaatatgttaaatcacttattcaa 31937605  T
Q  104 ttaggatagatgaaaaaacaattcggagattttggaatattaatgtatctcaccatttcatgtcctaacaaaacttttgcagctagcaaaatgagttaat 203  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31937606 ttaggatagatgaaaaaacaattcagagattttggaatattaatgtatctcaccatttcatgtcctaacaaaacttttgcagctagcaaaatgagtcaat 31937705  T
Q  204 ac 205  Q
    ||    
T  31937706 ac 31937707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 15590126 - 15590177
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15590126 cagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattc 15590177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15590164 - 15590225
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||    
T  15590164 agaaaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaa 15590225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 8693748 - 8693799
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  8693748 aaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcaccc 8693799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 31937466 - 31937520
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  31937466 cagaaaatatgtgaaatcacttattcaattaggatagaag-aaaaacaattcggag 31937520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 23654283 - 23654233
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  23654283 aaaaacaaatcggatgggtgatttttgggtcaaaattgaccctaaatcacc 23654233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 14783221 - 14783273
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  14783221 aaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcggag 14783273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 6419908 - 6419953
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||    
T  6419908 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 6419953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 12481458 - 12481515
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||||||||||||| ||| |||||||||||| |||||    
T  12481458 aaaaacaaatcggaggggtgatttttgggtcaaaattgatcctaaatcacccctctga 12481515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 14783259 - 14783307
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatca 52  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  14783259 aaaaacaattcggaggcgtgatttttgggtcaaaattgaccctaaatca 14783307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 21507858 - 21507910
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||| ||||    
T  21507858 aaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaatttggag 21507910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 4085051 - 4085000
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| || |||||||| |||||||| ||||||||||||||||    
T  4085051 aaaaacaattcggaaggatgatttttcggtcaaaattgaccctaaatcaccc 4085000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 8693704 - 8693761
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaatt---aggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||||||||   |||||||| | ||||||||||||||    
T  8693704 cagaaaatatgtgaaatcacttattcaattaggaggatagaaggaaaaacaattcgga 8693761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 12481417 - 12481472
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  12481417 cagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggag 12481472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 21507896 - 21507947
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||| ||| ||||||| |||||||||||| ||||||||||||||||    
T  21507896 aaaaacaatttggaggggtgatgtttgggtcaaaattgaccctaaatcaccc 21507947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 6296297 - 6296351
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatag-atgaaaaaacaattcgga 130  Q
    ||||||||||||||| |||||||||||||||| ||| | ||||||||||||||||    
T  6296297 agaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcgga 6296351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 6303107 - 6303161
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatag-atgaaaaaacaattcgga 130  Q
    ||||||||||||||| |||||||||||||||| ||| | ||||||||||||||||    
T  6303107 agaaaatatgtgaaaccacttattcaattagggtagaaggaaaaaacaattcgga 6303161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 6419946 - 6420003
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| || || ||||||||||||| |||||| |||||||||||||||| |||||    
T  6419946 aaaaacaactcagaggggtgatttttggatcaaaattgaccctaaatcacccctctga 6420003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 4921930 - 4921965
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4921930 gaaaatatgtgaaatcacttattcaattaagataga 4921965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 2304857 - 2304887
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaatta 106  Q
    |||||||||||||||||||||||||||||||    
T  2304857 cagaaaatatgtgaaatcacttattcaatta 2304887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 23638165 - 23638195
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaatta 106  Q
    |||||||||||||||||||||||||||||||    
T  23638165 cagaaaatatgtgaaatcacttattcaatta 23638195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 35219992 - 35220042
Alignment:
Q  5 aaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||| | ||| |||||||||||| ||||||| ||||||||||||||||    
T  35219992 aaaacaacttggaggggtgatttttgagtcaaaattgaccctaaatcaccc 35220042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 15057755 - 15057722
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattagga 109  Q
    |||||||||||||||||||| |||||||||||||    
T  15057755 cagaaaatatgtgaaatcacgtattcaattagga 15057722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 4393843 - 4393807
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  4393843 agaaaatatgtgaaatcacttgttctattaggataga 4393807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 19402855 - 19402903
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    |||||||||||||||||||||| |||||||| |||| | | ||||||||    
T  19402855 cagaaaatatgtgaaatcacttgttcaattatgatacaaggaaaaacaa 19402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 42609217 - 42609164
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42609217 agaaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaattcgga 42609164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 7771894 - 7771945
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  7771894 aaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 7771945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 17699627 - 17699572
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  17699627 cagaaaagatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggag 17699572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 34431096 - 34431045
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatca 52  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  34431096 agaaaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaaatca 34431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 17699586 - 17699528
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| | ||||||    
T  17699586 aaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcactcatctgaa 17699528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 17331361 - 17331304
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  17331361 aaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctga 17331304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42609180 - 42609127
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  42609180 agaaaaaacaattcggatgagtgatttttaggtcaaaattgaccctaaatcacc 42609127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 43493943 - 43493890
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  43493943 aaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcggaga 43493890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 32347761 - 32347817
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatag-atgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  32347761 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaagtcggag 32347817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 32347801 - 32347861
Alignment:
Q  2 gaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||| ||||| |||||||||||||||||||  |||||||||||||||| ||||||    
T  32347801 gaaaaaacaagtcggaggggtgatttttgggtcaaagttgaccctaaatcacccctctgaa 32347861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 34431134 - 34431082
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  34431134 cagaaaatatgtgaaatcacttattcaattaaaatagaagaaaaaacaattcg 34431082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 17331402 - 17331347
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||| ||||||    
T  17331402 cagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaaatcggag 17331347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 27241138 - 27241087
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||||    
T  27241138 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattc 27241087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 33164515 - 33164570
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||| | |||| | |||||||||||||||    
T  33164515 cagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaattcggag 33164570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 39179875 - 39179930
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||| ||||| | ||||| |||||||||    
T  39179875 cagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaataattcggag 39179930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 3740431 - 3740394
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3740431 cagaaaatatgtgaaatcacttattcaattaggataga 3740394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 17096286 - 17096323
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17096286 cagaaaatatgtgaaatcacttattcaattaggataga 17096323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 6635324 - 6635276
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||    
T  6635324 cagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaa 6635276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 12891750 - 12891715
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggata 111  Q
    ||||||||||||||||||||||||||||||||||||    
T  12891750 cagaaaatatgtgaaatcacttattcaattaggata 12891715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 28040703 - 28040668
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggata 111  Q
    ||||||||||||||||||||||||||||||||||||    
T  28040703 cagaaaatatgtgaaatcacttattcaattaggata 28040668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 29097822 - 29097771
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  29097822 aaaaacaaatcggaggggtgatctttgggtcaaaattgaccctaaatcaccc 29097771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 29097863 - 29097808
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  29097863 cagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggag 29097808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 43493905 - 43493854
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||  |||||||||||| |||||| ||||||||||||||||    
T  43493905 aaaaacaattcggagaggtgatttttggatcaaaattgaccctaaatcaccc 43493854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 17096329 - 17096387
Alignment:
Q  3 aaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    ||||||||| | ||| |||||||| ||||||||||| |||||||||||||||| |||||    
T  17096329 aaaaaacaactgggaggggtgattattgggtcaaaattgaccctaaatcacccctctga 17096387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 26295146 - 26295196
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    ||||||| |||||| ||||||||||||| |||||| |||||||||||||||    
T  26295146 aaaaacacttcggaggggtgatttttggatcaaaattgaccctaaatcacc 26295196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 28040662 - 28040604
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| |||||||||| ||||||    
T  28040662 aaaaacgatttggaggggtgatttttgggtcaaaattgaccgtaaatcacccctctgaa 28040604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 178156 - 178209
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    ||||||||||||||||||||||||||||||||| | | ||| |||| |||||||    
T  178156 aaaatatgtgaaatcacttattcaattaggatataaggaaacacaactcggaga 178209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 33164556 - 33164613
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||||||||| | |||||||||| ||||||| ||||| |||||||||| |||||    
T  33164556 aaaaacaattcggaggagtgatttttgagtcaaaattgaccataaatcacccctctga 33164613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 42396562 - 42396611
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    ||||||||||||||| |||||||||||| |||||| ||||||| ||||||    
T  42396562 aaaatatgtgaaatcgcttattcaattaagatagaagaaaaaataattcg 42396611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 12439684 - 12439736
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||| ||||||||||||||||| |||||||||   |||||||||||||||    
T  12439684 aaaatatatgaaatcacttattcaactaggatagaatgaaaaacaattcggag 12439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 17687277 - 17687225
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||| ||||||||||||| |||||| | |||||||| |||||    
T  17687277 gaaaatatgtgaaataacttattcaattaagatagaaggaaaaacaactcgga 17687225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 18653856 - 18653808
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||    
T  18653856 cagaaaatatacgaaatcacttattcaattaggatataagaaaaaacaa 18653808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 981113 - 981168
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttct 59  Q
    |||||||| ||||| ||| |||| ||||||||||| ||| ||||||||||||||||    
T  981113 aaaaacaactcggaggggcgattattgggtcaaaattgatcctaaatcacccttct 981168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 3079352 - 3079407
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||| |||||||||||||||||| |||| | | |||||||| ||||||    
T  3079352 cagaaaatatgttaaatcacttattcaattatgatataaggaaaaacaaatcggag 3079407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 6281077 - 6281026
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||| ||||| || |||||||||||||||||||| ||||| ||||||||||    
T  6281077 aaaaataattcagaggggtgatttttgggtcaaaattgaccataaatcaccc 6281026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 20483218 - 20483168
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||| ||| |||||||||||||||||||| ||| ||||||||||||    
T  20483218 aaaaacaatttgga-gggtgatttttgggtcaaaattgatcctaaatcaccc 20483168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 27241097 - 27241046
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||| || |||||||||||||||||||| ||| | ||||||||||    
T  27241097 aaaaacaattcagaggggtgatttttgggtcaaaattgatcataaatcaccc 27241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 6281117 - 6281067
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    ||||||||||| ||||||||||||||||||| ||||| | ||||| |||||    
T  6281117 agaaaatatgtaaaatcacttattcaattagaatagaaggaaaaataattc 6281067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 23882204 - 23882262
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||| |||| | |||||||||  |||||| |||||||||||||||| ||||||    
T  23882204 aaaaacaatttggattgatgatttttgaatcaaaattgaccctaaatcacccctctgaa 23882262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 26295106 - 26295160
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||| ||| |||||||||||||||| |||||||| | ||||||| |||||||    
T  26295106 agaaaatttgttaaatcacttattcaataaggatagaaggaaaaacacttcggag 26295160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 3740390 - 3740333
Alignment:
Q  5 aaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||| ||||| ||||||||| ||||||| | |||||||||||| | ||||||    
T  3740390 aaaacaattcagatggatgatttttgagtcaaaattaaccctaaatcacacctctgaa 3740333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 39531454 - 39531487
Alignment:
Q  80 aaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||||| ||||||    
T  39531454 aaatatgtgaaatcacttattcaattacgataga 39531487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 20483260 - 20483204
Alignment:
Q  76 cagaaaatatgtgaaatcacttattc-aattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||| |||||| ||| | | |||||||||| ||||    
T  20483260 cagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaacaatttggag 20483204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 3e-19; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30026973 - 30027033
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  30026973 agaaaaaacaactcggatgggtgatttttgggtcaaaaatgaccctaaatcacccctctga 30027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 24699864 - 24699806
Alignment:
Q  3 aaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24699864 aaaaaacatctcggatgggtgatttttgggtcaaaattgaccctaaatcacccttctga 24699806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 14600753 - 14600807
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  14600753 cagaaaatatgtgaaatcagttattcaattaggatagaagaaaaaacaactcgga 14600807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 30026935 - 30026989
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||| |||||    
T  30026935 cagaaaatatgtgaaatcacttattcaattatgatagaagaaaaaacaactcgga 30026989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 7583860 - 7583917
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  7583860 aaaaacaactcggatgggtgatttttgggtcaaaattgatcctaaatcacccctctga 7583917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 10148021 - 10147976
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaa 121  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  10148021 cagaaaatatgtgaaatcacttattcaattaggatagaagaaaaaa 10147976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14600791 - 14600844
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  14600791 agaaaaaacaactcggatggatgatttttgggtcaaaattgaccctaaatcacc 14600844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 9501624 - 9501572
Alignment:
Q  2 gaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  9501624 gaaaaaacaattcagatgggtgatttttggatcaaaattgaccctaaatcacc 9501572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 9501664 - 9501612
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatag-atgaaaaaacaattc 127  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  9501664 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaattc 9501612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 10338880 - 10338932
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  10338880 aaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggag 10338932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 12329700 - 12329648
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    |||||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  12329700 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcg 12329648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 31308219 - 31308167
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  31308219 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 31308167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 3204811 - 3204866
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||    
T  3204811 cagaaaatatgtgaaatcactcattaaattagaatagatggaaaaacaattcggag 3204866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 24791264 - 24791315
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  24791264 aaaaacaattcggatggatgatttttgggtcaaaattgaccataaatcaccc 24791315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 37128544 - 37128595
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  37128544 aaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcgga 37128595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 37612686 - 37612635
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||||||||||    
T  37612686 aaaaaaaattcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 37612635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 39067744 - 39067794
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaatt 126  Q
    ||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  39067744 cagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaatt 39067794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 2234528 - 2234577
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  2234528 aaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattcg 2234577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 10147980 - 10147928
Alignment:
Q  3 aaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||    
T  10147980 aaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcaccc 10147928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 10338918 - 10338970
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccct 56  Q
    |||||||||||||| |||||||||||| ||||||| ||||| |||||||||||    
T  10338918 aaaaacaattcggaggggtgatttttgcgtcaaaattgaccttaaatcaccct 10338970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 37612724 - 37612672
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||| ||||||||| | ||||| |||||||||    
T  37612724 aaaatatgtgaaatcacttattcaactaggatagaaggaaaaaaaattcggag 37612672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 1810315 - 1810366
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||||||||||    
T  1810315 aaaaaaaaatcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 1810366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 23971152 - 23971203
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||| |||||    
T  23971152 aaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaactcgga 23971203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 31202491 - 31202440
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||| |||||| ||||||||||||||||| ||||| ||||||||||    
T  31202491 aaaaacaatttggatggatgatttttgggtcaaaattgaccttaaatcaccc 31202440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 31407844 - 31407895
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||  | ||||||||||||||||| ||||||||||||||||    
T  31407844 aaaaacaattcggagagatgatttttgggtcaaaattgaccctaaatcaccc 31407895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 41361765 - 41361714
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||| ||||| |||||||||||||||||||| ||||| ||||||||||    
T  41361765 aaaaacaaatcggaggggtgatttttgggtcaaaattgaccataaatcaccc 41361714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 41361806 - 41361751
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  41361806 cagaaaatatgtgaaatcacttattcaattacggtagaaggaaaaacaaatcggag 41361751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 1039948 - 1040002
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||| |||||| ||||| | |||| |||||||||    
T  1039948 cagaaaatatgtgaaatcacttattgaattagaatagaaggaaaaccaattcgga 1040002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 24791223 - 24791277
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||| |||||||||||| |||||||||| | | ||||||||||||||    
T  24791223 cagaaaatatgttaaatcacttattgaattaggatataaggaaaaacaattcgga 24791277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 1810275 - 1810320
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaa 121  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||    
T  1810275 cagaaaaaatgtgaaatcacttattgaattaggatagaagaaaaaa 1810320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 13570782 - 13570831
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaatt 126  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||    
T  13570782 agaaaatatgtgaaatcacttatttaattaggatagaatgaaaaacaatt 13570831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 24699906 - 24699861
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaa 121  Q
    ||||||||||||||||||||||||| |||||||||| | |||||||    
T  24699906 cagaaaatatgtgaaatcacttatttaattaggatataagaaaaaa 24699861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 31407806 - 31407859
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    |||||||||||||||| |||||||| || |||||| | ||||||||||||||||    
T  31407806 aaaatatgtgaaatcatttattcaactatgatagaaggaaaaacaattcggaga 31407859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 1039989 - 1040037
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatca 52  Q
    |||| ||||||||||||||||||||||| |||||| ||||| |||||||    
T  1039989 aaaaccaattcggatgggtgatttttggatcaaaattgaccttaaatca 1040037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 111
Target Start/End: Original strand, 7579910 - 7579945
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggata 111  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7579910 cagaaaatatgtgaaatcacttattcaattaagata 7579945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 12329659 - 12329601
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||| |  |||||||||||| |||||| |||| ||||||||||| ||||||    
T  12329659 aaaaacaattcgaaatggtgatttttggatcaaaattgactctaaatcacccatctgaa 12329601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 31202532 - 31202502
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaatta 106  Q
    |||||||||||||||||||||||||||||||    
T  31202532 cagaaaatatgtgaaatcacttattcaatta 31202502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 2234566 - 2234619
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccctt 57  Q
    |||||||||||| | ||||||||||||| |||||| | |||||| |||||||||    
T  2234566 aaaaacaattcgaaggggtgatttttggatcaaaattaaccctagatcaccctt 2234619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 22787566 - 22787529
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  22787566 cagaaaatatgttaaatcacttattcaactaggataga 22787529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 30039428 - 30039476
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcac 53  Q
    |||||||||||||||| |||| ||||||||||||| ||||| ||||||||    
T  30039428 aaaaacaattcggatgagtga-ttttgggtcaaaattgaccataaatcac 30039476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 2025264 - 2025312
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    ||||||| |||||||||||||||||||||||| ||| | | ||||||||    
T  2025264 cagaaaacatgtgaaatcacttattcaattagaataaaaggaaaaacaa 2025312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 3204852 - 3204899
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatca 52  Q
    |||||||||||||| |||| ||||||||||||||| |||| ||||||||    
T  3204852 aaaaacaattcgga-gggtaatttttgggtcaaaattgactctaaatca 3204899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 4757239 - 4757191
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    ||||||||||||||||||| ||||| ||||| |||||| | ||||||||    
T  4757239 cagaaaatatgtgaaatcatttatttaattatgatagaaggaaaaacaa 4757191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 11161900 - 11161864
Alignment:
Q  19 gggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  11161900 gggtgatttttgggtcaaaattgaccctaaattaccc 11161864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 15288853 - 15288905
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    ||||||||| |||||||||| |||| ||||||||||||   ||||||||||||    
T  15288853 cagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaattcg 15288905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 15469222 - 15469274
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    ||||||||| |||||||||| |||| ||||||||||||   ||||||||||||    
T  15469222 cagaaaataagtgaaatcacgtatttaattaggatagaaagaaaaacaattcg 15469274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 3e-19; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 20561220 - 20561280
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaaca 64  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||    
T  20561220 aaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaaca 20561280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 18089439 - 18089494
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  18089439 cagaaaatatgtgaaatcacttattcaattaggatataagaaaaaacaattcggag 18089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 43474216 - 43474267
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43474216 aaaaacaattcggatgggtgatttttgggtcaaaattgaccctaaatcaccc 43474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 11937947 - 11938005
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||    
T  11937947 aaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaa 11938005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 28261981 - 28262039
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||    
T  28261981 aaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcacccatctgaa 28262039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 32314516 - 32314462
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  32314516 cagaaaatatgtgaaatcatttattcaattaggatagaagaaaaaacaattcgga 32314462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 33012110 - 33012052
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||    
T  33012110 aaaaacaattcggatgagtgatttttgggtcaaaattgaccctaaatcacccgtctgaa 33012052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 44942356 - 44942304
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  44942356 aaaatatgtgaaatcacttattcaattaggatagaagaaaaaacaactcggag 44942304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 13740707 - 13740762
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  13740707 cagaaaatatatgaaatcacttattcaattaggatagaaggaaaaacaattcggag 13740762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 31908863 - 31908917
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  31908863 cagaaaatatgtgaaatcacttattcaactaggataaaagaaaaaacaattcgga 31908917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 43474175 - 43474229
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||||||    
T  43474175 cagaaaatttgtgaaatcacttattcaattaggatagaaggaaaaacaattcgga 43474229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 34416810 - 34416863
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  34416810 gaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcggag 34416863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44942321 - 44942260
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||| |||||||||| ||||||    
T  44942321 agaaaaaacaactcggaggggtgatttttgggtcaaaattgaccataaatcacccatctgaa 44942260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 12704761 - 12704709
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    |||||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  12704761 cagaaaatatgtgaaatcacttattcaattaggatataaggaaaaacaattcg 12704709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 17268171 - 17268219
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||    
T  17268171 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 17268219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 27095776 - 27095724
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  27095776 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 27095724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 33012149 - 33012097
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  33012149 gaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaattcgga 33012097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 5754321 - 5754270
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||||||||    
T  5754321 aaaaacaattcggagggatgatttttgggtcaaaattgaccctaaatcaccc 5754270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 12704720 - 12704669
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  12704720 aaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcaccc 12704669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 32015253 - 32015202
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  32015253 aaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 32015202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 35333579 - 35333528
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  35333579 cagaaaatatgtgaaatcacttattcaattaggatagcaggaaaaacaattc 35333528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 4426705 - 4426759
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||| |||||    
T  4426705 cagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaaatcgga 4426759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18089477 - 18089531
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||| | ||||||||||| |||||| ||||||||||||||||    
T  18089477 agaaaaaacaattcggaggagtgatttttggatcaaaattgaccctaaatcaccc 18089531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 25067885 - 25067835
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  25067885 aaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacc 25067835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 11937908 - 11937961
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatag-atgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  11937908 aaaatatgtgaaatcacttattcaattaggatagaaaggaaaaacaattcggag 11937961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 13879053 - 13879090
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13879053 cagaaaatatgtgaaatcacttattcaattaggataga 13879090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 14019178 - 14019215
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14019178 cagaaaatatgtgaaatcacttattcaattaggataga 14019215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 15919946 - 15919893
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||| ||||||    
T  15919946 gaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaactcggag 15919893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 27095738 - 27095681
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||||||||||| |||||    
T  27095738 aaaaacaactcggaggggtgatttttaggtcaaaattgaccctaaatcacccatctga 27095681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 4604354 - 4604402
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    |||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  4604354 cagaaaatatgtgaaatcacttattcaattagaatagaaggaaaaacaa 4604402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 5754359 - 5754307
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||| |||||||| ||||||||| | |||||||||||||||    
T  5754359 aaaatatgtgaaatcatttattcaactaggatagaaggaaaaacaattcggag 5754307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 9690023 - 9690075
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||| |||||||    
T  9690023 aaaatatgtgagatcacttattcaattaggatagaaggaaaaacagttcggag 9690075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 22597206 - 22597154
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||| |||||||||||| | |||||||| ||||||    
T  22597206 aaaatatgtgaaatcacttatttaattaggatagaaggaaaaacaactcggag 22597154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 111
Target Start/End: Original strand, 10287053 - 10287088
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggata 111  Q
    ||||||||||||||||||||||||||||||||||||    
T  10287053 cagaaaatatgtgaaatcacttattcaattaggata 10287088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 12891192 - 12891235
Alignment:
Q  19 gggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  12891192 gggtgatttttgggtcaaaattgaccctaaatcacccctctgaa 12891235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 15919907 - 15919856
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||| ||||| |||||||||||||||||||| |||| |||||||||||    
T  15919907 aaaaacaactcggaggggtgatttttgggtcaaaattgactctaaatcaccc 15919856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 20561179 - 20561234
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||| ||||||||| ||| ||||||| | |||||||||||||||    
T  20561179 cagaaaatatgtgaaaccacttattcgatttggatagaaggaaaaacaattcggag 20561234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 25067926 - 25067871
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||  ||||| | |||||||| ||||||    
T  25067926 cagaaaatatgtgaaatcacttattcaattaaaatagaaggaaaaacaaatcggag 25067871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31908901 - 31908952
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatca 52  Q
    ||||||||||||||||| ||||||||||||| |||||| |||| ||||||||    
T  31908901 agaaaaaacaattcggaagggtgatttttggatcaaaattgactctaaatca 31908952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 36868041 - 36867990
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||| || |||||||||||| ||||||| ||||||||||||||||    
T  36868041 aaaaacaattcagaggggtgatttttgagtcaaaattgaccctaaatcaccc 36867990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 38535352 - 38535403
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||| |||||    
T  38535352 cagaaaatatgtgaaatcacttattcaattatgatagaaggaaaaaaaattc 38535403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 7073036 - 7073094
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||| ||||||| | ||| |||||||||||||||| |||||||||||||||| ||||||    
T  7073036 aaaaccaattcgaaagggcgatttttgggtcaaaattgaccctaaatcacccctctgaa 7073094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 9690061 - 9690119
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||| |||||| |||||||||||||||||||  ||||| |||||||||| ||||||    
T  9690061 aaaaacagttcggaggggtgatttttgggtcaaatttgaccttaaatcacccctctgaa 9690119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 13879101 - 13879159
Alignment:
Q  3 aaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||||||||||| || |||||    
T  13879101 aaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcatccctctga 13879159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 14019226 - 14019284
Alignment:
Q  3 aaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||||||||||| || |||||    
T  14019226 aaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcatccctctga 14019284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 28231144 - 28231198
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||||||  | |||||| | ||||||||||||||    
T  28231144 cagaaaatatgtgaaatcacttattcaaccaagatagaaggaaaaacaattcgga 28231198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 4604395 - 4604452
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||| ||| || ||||||||||||||| ||||| ||||||||||||||||    
T  4604395 aaaaacaactcgaatgagtaatttttgggtcaaaattgaccttaaatcacccttctga 4604452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 22597168 - 22597111
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| || ||||||||||||||||| ||||| |||||||||| |||||    
T  22597168 aaaaacaactcggagggatgatttttgggtcaaaattgaccttaaatcacccctctga 22597111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 9978757 - 9978813
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctg 60  Q
    |||||||||| | | |||||||||||||||||||| ||||| |||||||||| ||||    
T  9978757 aaaaacaatttgaaggggtgatttttgggtcaaaattgaccttaaatcacccctctg 9978813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 34963113 - 34963161
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    ||||||| ||||||||||||||||||||||||| |||| | ||||||||    
T  34963113 cagaaaaaatgtgaaatcacttattcaattagggtagaaggaaaaacaa 34963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 4739403 - 4739348
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||| ||||||| ||||||||| || | |||||||| ||||||    
T  4739403 cagaaaatatgtgaaattacttatttaattaggatggaaggaaaaacaactcggag 4739348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 38535408 - 38535451
Alignment:
Q  19 gggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||    
T  38535408 gggtgctttttgggtcaaaattgaccctaaatcacccctctgaa 38535451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 113
Target Start/End: Complemental strand, 4732138 - 4732108
Alignment:
Q  83 tatgtgaaatcacttattcaattaggataga 113  Q
    |||||||||||||||||||||||||||||||    
T  4732138 tatgtgaaatcacttattcaattaggataga 4732108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 9978716 - 9978766
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaatt 126  Q
    ||||||||||||||||||| ||||||||||| |||| | | ||||||||||    
T  9978716 cagaaaatatgtgaaatcatttattcaattaagataaaaggaaaaacaatt 9978766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 34471039 - 34470985
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||| ||||||||| ||||||   | |||||||||||||    
T  34471039 agaaaatatgtgaaatcactgattcaattaagatagaaagataaacaattcggag 34470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 36868081 - 36868031
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    ||||||||||||||||| |||||| |||||| ||||| | |||||||||||    
T  36868081 agaaaatatgtgaaatcgcttattgaattagaatagaaggaaaaacaattc 36868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 38384492 - 38384546
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggagat 133  Q
    |||| ||||||||||||||||||||||||| || | | |||||||| ||||||||    
T  38384492 aaaaaatgtgaaatcacttattcaattagggtataaggaaaaacaaatcggagat 38384546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 17268212 - 17268269
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||| | || ||||||||||||||||| ||||| |||||||||| |||||    
T  17268212 aaaaacaactcgaagggatgatttttgggtcaaaattgaccataaatcacccctctga 17268269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 41797648 - 41797591
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| || || ||||||||||| |||||||| | |||||||||||||| |||||    
T  41797648 aaaaacaactctgaggggtgatttttaggtcaaaattaaccctaaatcacccctctga 41797591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 7072995 - 7073047
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    |||||||| |||||| | |||||||||||||||||||| | |||| |||||||    
T  7072995 cagaaaatttgtgaagttacttattcaattaggatagaaggaaaaccaattcg 7073047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 13740748 - 13740795
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatca 52  Q
    ||||||||||||||  ||||||||||||||||||| ||||| |||||||    
T  13740748 aaaaacaattcggagtggtgatttttgggtcaaaa-tgaccataaatca 13740795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 28231236 - 28231200
Alignment:
Q  19 gggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  28231236 gggtgatttttgggttaaaattgaccctaaatcaccc 28231200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 35333538 - 35333490
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatca 52  Q
    |||||||||||  | |||||||||||||||||||| ||| |||||||||    
T  35333538 aaaaacaattcttaggggtgatttttgggtcaaaattgatcctaaatca 35333490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 3e-19; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 7995607 - 7995663
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  7995607 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggaga 7995663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 33487118 - 33487176
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||    
T  33487118 aaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaa 33487176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 424338 - 424393
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  424338 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 424393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 3232862 - 3232807
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||||||||||    
T  3232862 cagaaaatatgtgaaatcatttattcaattaggatagaaggaaaaacaattcggag 3232807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 20411606 - 20411555
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  20411606 aaaaacaattcggatgggtgatttttgggtcaaaattgaccataaatcaccc 20411555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 32784141 - 32784090
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  32784141 aaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 32784090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 32784182 - 32784127
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  32784182 cagaaaatatgtgaaatcacttattcaataaggatagaaggaaaaacaattcggag 32784127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 7995648 - 7995706
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||    
T  7995648 aaaaacaattcggagaggtgatttttgggtcaaaattgaccctaaatcacccctctgaa 7995706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 37822393 - 37822443
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  37822393 agaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattc 37822443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 44517221 - 44517167
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  44517221 cagaaaatatgtgaaatcacttattgaattaggatagaaggaaaaacaattcgga 44517167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 424379 - 424436
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  424379 aaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctga 424436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 12871654 - 12871597
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  12871654 aaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctga 12871597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 13488624 - 13488676
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccct 56  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  13488624 aaaaacaaatcggatgggtgatttttgggtcaaaatcgaccctaaatcaccct 13488676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 28678218 - 28678269
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||||||||    
T  28678218 aaaaacaattcggacgagtgatttttgggtcaaaattgaccctaaatcaccc 28678269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 33939090 - 33939141
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  33939090 aaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcaccc 33939141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 3232821 - 3232763
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||| ||||||||||| | |||||| |||||||||||||||| ||||||    
T  3232821 aaaaacaattcggaggggtgattttttgatcaaaattgaccctaaatcacccatctgaa 3232763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 45193675 - 45193729
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggatag-atgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  45193675 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaacaactcggag 45193729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 42276428 - 42276375
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||| ||||| ||||| |||||| |||||||||||||||||    
T  42276428 gaaaatatgtgaaatcagttatttaattatgatagaagaaaaaacaattcggag 42276375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17347634 - 17347575
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||| || |||||    
T  17347634 agaaaaaacaactcggatgggtgattttt-ggtcaaaattgaccctaaatcatccatctga 17347575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 33487080 - 33487132
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||| ||||||||| ||||||||||||||||| | |||||||||||||||    
T  33487080 aaaatatatgaaatcacatattcaattaggatagaaggaaaaacaattcggag 33487132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 111
Target Start/End: Original strand, 4882406 - 4882441
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggata 111  Q
    ||||||||||||||||||||||||||||||||||||    
T  4882406 cagaaaatatgtgaaatcacttattcaattaggata 4882441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 14265358 - 14265311
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaaca 123  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||    
T  14265358 cagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaaca 14265311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 27534773 - 27534718
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  27534773 cagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggag 27534718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 28678180 - 28678231
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||||||    
T  28678180 aaaatatgtgaaatcacttattcaattatgatagaacgaaaaacaattcgga 28678231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 29205318 - 29205267
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||  | |||||||||||||||||||| ||||||||||||||||    
T  29205318 aaaaacaattccaaggggtgatttttgggtcaaaattgaccctaaatcaccc 29205267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 29205359 - 29205308
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    |||||||||| |||||||||||||||||||| |||||| | |||||||||||    
T  29205359 cagaaaatatatgaaatcacttattcaattatgatagaaggaaaaacaattc 29205308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 4871074 - 4871128
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||| |||||||||||||| ||| | | |||||||||||||||    
T  4871074 agaaaatatgtgaaataacttattcaattagaataaaaggaaaaacaattcggag 4871128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 42490926 - 42490876
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    |||||||||||||| ||||||||||| |||||||  |||||||||||||||    
T  42490926 aaaaacaattcggaggggtgatttttaggtcaaacttgaccctaaatcacc 42490876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 18343647 - 18343590
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||| | |||||||||||||||||||| ||| |||||||||||| |||||    
T  18343647 aaaaacaaatcgaaggggtgatttttgggtcaaaattgatcctaaatcacccctctga 18343590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 27534732 - 27534675
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| || ||||||||||||||||| ||||||||||||| || |||||    
T  27534732 aaaaacaaatcggagggatgatttttgggtcaaaattgaccctaaatcatccctctga 27534675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42276392 - 42276332
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||||||||| |||||| ||||| ||||||| | |||||||||||||| ||||||    
T  42276392 agaaaaaacaattcggaggggtga-ttttgtgtcaaaaataaccctaaatcacccctctgaa 42276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 42490961 - 42490912
Alignment:
Q  82 atatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||| ||||||   |||||||||||||||    
T  42490961 atatgtgaaatcacttattcaattaagatagaacgaaaaacaattcggag 42490912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 45750512 - 45750453
Alignment:
Q  2 gaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||| ||||| | ||||||||||||||||| ||||| |||||||||| ||||||    
T  45750512 gaaaaaacaat-cggattgatgatttttgggtcaaaattgaccttaaatcacccctctgaa 45750453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 51418087 - 51418040
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  51418087 cagaaaatatgtgaaatcactt-ttcaattaggatagaaggaaaaacaa 51418040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 10627074 - 10627039
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggata 111  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10627074 cagaaaatatgtgaaattacttattcaattaggata 10627039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 111
Target Start/End: Original strand, 29726643 - 29726678
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggata 111  Q
    |||||||||||||||||||||||||| |||||||||    
T  29726643 cagaaaatatgtgaaatcacttattcgattaggata 29726678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 4882447 - 4882505
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||| ||||| |||||||||||||||| ||| |||| ||||||| ||| ||||||    
T  4882447 aaaaacaaatcggaggggtgatttttgggtcgaaattgactctaaatcgcccatctgaa 4882505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 17347672 - 17347618
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||| ||||||||||||||||||  ||| |||||| |||||||||| |||||    
T  17347672 cagaaaagatgtgaaatcacttattcctttatgatagaagaaaaaacaactcgga 17347618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 20411647 - 20411593
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||||||||||||||| | ||| |   ||||||||||||||    
T  20411647 cagaaaatatgtgaaatcacttattcaatttgaataaaaagaaaaacaattcgga 20411593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 12871693 - 12871660
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggata 111  Q
    |||||||||||||||||||||||| |||||||||    
T  12871693 gaaaatatgtgaaatcacttattcgattaggata 12871660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 13869667 - 13869627
Alignment:
Q  13 tcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  13869667 tcggatgggtgatttttgg-tcaaaattgaccctaaatcacc 13869627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 14265317 - 14265260
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||  ||||| |||||||||||  ||||||| |||||||||||||||| |||||    
T  14265317 aaaaacagctcggaggggtgatttttttgtcaaaattgaccctaaatcacccatctga 14265260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 45750549 - 45750517
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggata 111  Q
    |||||||||||||| ||||||||||||||||||    
T  45750549 aaaatatgtgaaataacttattcaattaggata 45750517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 74238 - 74184
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  74238 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgga 74184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 74197 - 74139
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||||||||||||||||||||||||||| |||  ||||||||| | ||||||    
T  74197 aaaaacaattcggatgggtgatttttgggtcaaaattgattctaaatcactcctctgaa 74139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 5e-18; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 46026117 - 46026175
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||    
T  46026117 aaaaacaattcggatgtgtgatttttgggtcaaaattgaccctaaatcacccctctgaa 46026175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 48304483 - 48304541
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  48304483 aaaagcaattcggatgggtgatttttgggtcaaaattgaccctaaatcacccctctgaa 48304541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 5684439 - 5684383
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  5684439 cagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggaga 5684383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 5709489 - 5709433
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  5709489 cagaaaatatgtgaaatcacttattcaattaggatagaatgaaaaacaattcggaga 5709433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 11833093 - 11833038
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  11833093 cagaaaatatgtgaaatcacttattcaattaggaaagaaggaaaaacaattcggag 11833038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 17473770 - 17473825
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  17473770 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggag 17473825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 17579444 - 17579389
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  17579444 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggag 17579389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 28664959 - 28665014
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  28664959 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 28665014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 1281225 - 1281283
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||    
T  1281225 aaaaacaattcggatgggtgattttttggtcaaaatggaccctaaatcacccatctgaa 1281283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 10094515 - 10094461
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  10094515 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcgga 10094461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 15674659 - 15674712
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgg 129  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  15674659 cagaaaatatgtgaaatcacttattcaattaggataggaggaaaaacaattcgg 15674712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 32740824 - 32740775
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  32740824 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcg 32740775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 36719629 - 36719682
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccctt 57  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  36719629 aaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcaccctt 36719682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6667431 - 6667379
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcac 53  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  6667431 agaaaaaacaattcggtggggtgatttttgggtcaaaattgaccctaaatcac 6667379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 21990696 - 21990636
Alignment:
Q  2 gaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||||| |||||||||||  ||||||| |||||||||||||||| ||||||    
T  21990696 gaaaaaacaattcggaggggtgatttttcagtcaaaattgaccctaaatcacccctctgaa 21990636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 21990736 - 21990680
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatag-atgaaaaaacaattcggag 131  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  21990736 cagaatatatgtgaaatcacttattcaattaggatagcaggaaaaaacaattcggag 21990680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 27535489 - 27535433
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctg 60  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||    
T  27535489 aaaaacaattcggatgggtgatttttggataaaaattgaccctaaatcacccctctg 27535433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 39533022 - 39533078
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||| ||||    
T  39533022 cagaaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcagaga 39533078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 45457606 - 45457658
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  45457606 aaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggag 45457658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 9785350 - 9785299
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  9785350 aaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcaccc 9785299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 10574414 - 10574363
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  10574414 aaaaacaattcggaggggtgatttttgagtcaaaattgaccctaaatcaccc 10574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 17473811 - 17473862
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  17473811 aaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcaccc 17473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 17509251 - 17509306
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||| | | ||||| |||||||||    
T  17509251 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcggag 17509306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 17543963 - 17543908
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||| | | ||||| |||||||||    
T  17543963 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcggag 17543908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 17579403 - 17579352
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  17579403 aaaaacaattcggaggggtgattttttggtcaaaattgaccctaaatcaccc 17579352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 21603536 - 21603485
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    |||| ||||||||||||||||||||||||||||||||| | |||||||||||    
T  21603536 cagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattc 21603485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 42603816 - 42603871
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||| ||||||   |||||||||||||||    
T  42603816 cagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattcggag 42603871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 42644750 - 42644699
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    |||| ||||||||||||||||||||||||||||||||| | |||||||||||    
T  42644750 cagagaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattc 42644699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 43847144 - 43847089
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||||||   | |||||||||||||||    
T  43847144 cagaaaatatgtgaaatcacttattcaattaggataagaggaaaaacaattcggag 43847089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 6667470 - 6667416
Alignment:
Q  76 cagaaaatatgtgaaatcacttattc-aattaggatagatgaaaaaacaattcgg 129  Q
    |||||||||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  6667470 cagaaaatatgtgaaatcacttattcaaattagaatagaagaaaaaacaattcgg 6667416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 9720021 - 9720071
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaatt 126  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||||    
T  9720021 cagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatt 9720071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 40761622 - 40761564
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||||| || ||||||    
T  40761622 aaaaacagttcggaggggtgatttttgggtcaaaattgaccctaaatcatccctctgaa 40761564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 3266462 - 3266425
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3266462 cagaaaatatgtgaaatcacttattcaattaggataga 3266425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 9785388 - 9785339
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||||    
T  9785388 aaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcg 9785339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 28665000 - 28665057
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||| ||||||||| |||||||||||||||| |||||    
T  28665000 aaaaacaactcggaggggtgattttagggtcaaaattgaccctaaatcacccatctga 28665057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 36579362 - 36579414
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||| |||||||||||||| ||||||||| | |||||||||||||||    
T  36579362 aaaatatgtggaatcacttattcaactaggatagaaggaaaaacaattcggag 36579414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 36579400 - 36579448
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatca 52  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  36579400 aaaaacaattcggaggggtgattttcgggtcaaaattgaccctaaatca 36579448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 5684398 - 5684347
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||  ||||||||||| ||||||| ||||||||||||||||    
T  5684398 aaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcaccc 5684347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 5709448 - 5709397
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||  ||||||||||| ||||||| ||||||||||||||||    
T  5709448 aaaaacaattcggagaggtgatttttgcgtcaaaattgaccctaaatcaccc 5709397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 45457644 - 45457695
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||    
T  45457644 aaaaacaattcggaggagtgatttttgcgtcaaaattgaccctaaatcaccc 45457695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 46026079 - 46026130
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||| |||| |||||||||||||||||||| | ||||||||||||||    
T  46026079 aaaatatgttaaataacttattcaattaggatagaaggaaaaacaattcgga 46026130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 2622666 - 2622612
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||| |||||| ||||||||||||| |||||| | ||||||||||||||    
T  2622666 cagaaaatatctgaaattacttattcaattaagatagaaggaaaaacaattcgga 2622612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 22747596 - 22747646
Alignment:
Q  5 aaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||||||||||    
T  22747596 aaaacaacttggaggggtgatttttgggtcaaaattgaccctaaatcaccc 22747646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 41287981 - 41287939
Alignment:
Q  13 tcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  41287981 tcggatgggtgattattgggtcaaaattgaccctaaatcaccc 41287939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 42603857 - 42603907
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    |||||||||||||| |||||||||||| ||||||| ||||| |||||||||    
T  42603857 aaaaacaattcggaggggtgatttttgagtcaaaattgaccataaatcacc 42603907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 41288032 - 41287995
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    |||||||||||||||||||| |||||||||||||||||    
T  41288032 cagaaaatatgtgaaatcacctattcaattaggataga 41287995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 2622625 - 2622574
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccct 56  Q
    |||||||||||||||| |||||||||||||||||| ||| | |||||||||||    
T  2622625 aaaaacaattcggatgcgtgatttttgggtcaaaattga-cttaaatcaccct 2622574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 27535524 - 27535476
Alignment:
Q  82 atatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||| ||||||| ||||| | ||||||||||||||    
T  27535524 atatgtgaaatcacttatacaattagaatagaaggaaaaacaattcgga 27535476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 39533063 - 39533115
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccct 56  Q
    ||||||||||| ||  | ||||||||||||||||| |||||||||||||||||    
T  39533063 aaaaacaattcagagagatgatttttgggtcaaaattgaccctaaatcaccct 39533115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 45482135 - 45482091
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaaca 123  Q
    |||||||||||||||||||||| |||||||||||| | |||||||    
T  45482135 aaaatatgtgaaatcacttatttaattaggatagaaggaaaaaca 45482091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 1281187 - 1281238
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||||||| ||| |   ||||||||||||||    
T  1281187 aaaatatgtgaaatcacttattcaattagaatataatgaaaaacaattcgga 1281238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 10574455 - 10574400
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||| |||||  |||||||||||||||| | | |||||||||||||||    
T  10574455 cagaaaatatgtaaaatcgtttattcaattaggataaaaggaaaaacaattcggag 10574400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 11833052 - 11832993
Alignment:
Q  4 aaaaacaattcggatggg-tgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||| ||| ||||||||||||||||| ||||| ||||||| || ||||||    
T  11833052 aaaaacaattcggagggggtgatttttgggtcaaaattgaccataaatcatccctctgaa 11832993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 21954907 - 21954961
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttct 59  Q
    |||||||| ||||||| |||||||| |||| |||| ||||||||||||||||||||    
T  21954907 aaaaacaactcggatgagtgatttt-gggttaaaattgaccctaaatcacccttct 21954961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 17509292 - 17509349
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||| |||||||| ||||||||||| |||||||| ||||||||||||| || ||||||    
T  17509292 aaaaataattcgga-gggtgattttttggtcaaaattgaccctaaatcatccctctgaa 17509349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 17543922 - 17543865
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||| |||||||| ||||||||||| |||||||| ||||||||||||| || ||||||    
T  17543922 aaaaataattcgga-gggtgattttttggtcaaaattgaccctaaatcatccctctgaa 17543865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 22747558 - 22747592
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||| |||||||||||||||||||||||||    
T  22747558 aaaatatgtcaaatcacttattcaattaggataga 22747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 32643086 - 32643040
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaac 122  Q
    |||||||||||||||||||||| |||||||| | |||| ||||||||    
T  32643086 cagaaaatatgtgaaatcacttgttcaattaaggtagaagaaaaaac 32643040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 42644709 - 42644651
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||  ||| |||||||||| ||||||| ||| |||||||||||| ||||||    
T  42644709 aaaaacaattcaaatgagtgatttttgagtcaaaattgatcctaaatcacccctctgaa 42644651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 48304442 - 48304496
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||| | ||||||||||||||||||||||||||  | |||| |||||||||    
T  48304442 cagaaaatctatgaaatcacttattcaattaggatagcaggaaaagcaattcgga 48304496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 24320273 - 24320318
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    |||||||||||||||||||||| ||||| |||||| | ||||||||    
T  24320273 aaaatatgtgaaatcacttattaaattaagatagaaggaaaaacaa 24320318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 24988443 - 24988499
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||| ||||||||| ||||||| |||||||| |||||    
T  24988443 aaaaacaactcggaggggtgatttt-gggtcaaaattgaccctgaatcacccctctga 24988499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 45482097 - 45482048
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcac 53  Q
    |||||||  ||||| |||||||||| ||||||||| ||||||||||||||    
T  45482097 aaaaacagctcggaggggtgattttggggtcaaaattgaccctaaatcac 45482048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 5e-18; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 54239073 - 54239127
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  54239073 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcgga 54239127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 30156378 - 30156435
Alignment:
Q  5 aaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||    
T  30156378 aaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaa 30156435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 53155526 - 53155577
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  53155526 aaaaacaattcgaatgggtgatttttgggtcaaaattgaccctaaatcaccc 53155577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 14585536 - 14585486
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaatt 126  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  14585536 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaatt 14585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19645257 - 19645199
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttct 59  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||||    
T  19645257 agaaaaaacaattcggatggatggtttttaggtcaaaattgaccctaaatcacccttct 19645199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 19645295 - 19645241
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  19645295 cagaaaatatgtgaaatcacttatttaattaggacagaagaaaaaacaattcgga 19645241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 31462842 - 31462900
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||    
T  31462842 aaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatcacccctctgaa 31462900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 1074989 - 1075046
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  1074989 aaaaacaactcggatgggtgatttttgggtcaaaattgaccataaatcacccctctga 1075046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 3457014 - 3456961
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  3457014 aaaatatgttaaatcacttattcaattaggatagaaggaaaaacaattcggaga 3456961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 11819116 - 11819059
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  11819116 aaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctga 11819059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 32080850 - 32080907
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  32080850 aaaaacaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccatctga 32080907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34960951 - 34961012
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||| |||||| ||||||    
T  34960951 agaaaaaacaattctgaggggtgatttttgggtcaaaattgaccctaagtcacccctctgaa 34961012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 53402663 - 53402614
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcac 53  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  53402663 aaaaacaattcggatgggtgatttttgggtcaaaattgaccttaaatcac 53402614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 4206569 - 4206621
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  4206569 aaaatatgtgaaaacacttattcaattaggatatatggaaaaacaattcggag 4206621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 34960916 - 34960964
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  34960916 aaaatatgtgaaatcacttattcaattagaatagaagaaaaaacaattc 34960964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 35174775 - 35174727
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  35174775 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattc 35174727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 36691854 - 36691909
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| || ||||||    
T  36691854 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaataactcggag 36691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 48400932 - 48400881
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  48400932 aaaaacaattccgatgtgtgatttttgggtcaaaattgaccctaaatcaccc 48400881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 22485039 - 22484985
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||    
T  22485039 cagaaaatatgcgaaatcacttattcaattaggatagaaggaaaaacaatccgga 22484985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 27189449 - 27189503
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||| |||||||||| |||||||||||||||||||| | ||||||||||||||    
T  27189449 cagaaattatgtgaaattacttattcaattaggatagaaggaaaaacaattcgga 27189503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 36624749 - 36624803
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||| | |||||||||| | ||||||||||||||    
T  36624749 cagaaaatatgtgaaatcacttatttagttaggatagaaggaaaaacaattcgga 36624803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 36624790 - 36624848
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||||||||||||||||||||||||  | ||||||| |||||||| ||||||    
T  36624790 aaaaacaattcggatgggtgatttttgggtcatgattgaccctgaatcacccctctgaa 36624848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 40013371 - 40013421
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    |||||||||||| |||||||||||||||||||||| |||| ||||||||||    
T  40013371 aaaaacaattcgaatgggtgatttttgggtcaaaattgacactaaatcacc 40013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 31270397 - 31270348
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  31270397 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaataattcg 31270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 36691895 - 36691952
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    ||||| || ||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  36691895 aaaaataactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctga 36691952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 40883963 - 40884016
Alignment:
Q  2 gaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| || | ||||||||||||||||| ||||||||||||||||    
T  40883963 gaaaaaacaattcgaattgatgatttttgggtcaaaattgaccctaaatcaccc 40884016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 41868349 - 41868386
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41868349 cagaaaatatgtgaaatcacttattcaattaggataga 41868386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 48652536 - 48652593
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||||||||||||  |||||||||||||||| |||||    
T  48652536 aaaaacaaatcggaggggtgatttttgggtcaaagttgaccctaaatcacccctctga 48652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 31462801 - 31462853
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    |||||||||||| ||||||||||||||||||||||| | | ||||||||||||    
T  31462801 cagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcg 31462853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 49628145 - 49628193
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  49628145 aaaatatgtgaaatcacttattcaactaggatagaaggaaaaacaattc 49628193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 24483733 - 24483784
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    ||||||||||||||||||||||||||||||| ||||||   |||||||||||    
T  24483733 cagaaaatatgtgaaatcacttattcaattatgatagaatgaaaaacaattc 24483784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 31270359 - 31270308
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||| |||||| | |||||||||||||||||||| ||||||||||||||||    
T  31270359 aaaaataattcgaaggggtgatttttgggtcaaaattgaccctaaatcaccc 31270308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 48652495 - 48652550
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  48652495 cagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggag 48652550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 3456976 - 3456918
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||||||  |||||||||||| |||||| ||||| |||||||||| ||||||    
T  3456976 aaaaacaattcggagaggtgatttttggatcaaaattgaccataaatcacccctctgaa 3456918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 13702068 - 13702126
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||| |||||| | |||||| ||||||||||||| |||||||||||||||| ||||||    
T  13702068 aaaaataattcgaaggggtgacttttgggtcaaaattgaccctaaatcacccctctgaa 13702126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 38527337 - 38527287
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaatt 126  Q
    ||||||||||||||||||| ||||||||||| |||||| | ||||||||||    
T  38527337 cagaaaatatgtgaaatcatttattcaattaagatagaaggaaaaacaatt 38527287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 39610238 - 39610180
Alignment:
Q  3 aaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||| |||||||||| |||||    
T  39610238 aaaaaacaactcggaggggtgattattgggtcaaaattgaccataaatcacccctctga 39610180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 39610283 - 39610249
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggataga 113  Q
    |||||||||||||||||||||||||||||||||||    
T  39610283 aaaatatgtgaaatcacttattcaattaggataga 39610249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 13702027 - 13702064
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  13702027 cagaaaatatgtgaaatcacttattcaattatgataga 13702064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 40013327 - 40013360
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattagga 109  Q
    ||||||||||||||||||||||||||||||||||    
T  40013327 cagaaaatatgtgaaatcacttattcaattagga 40013360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 40883923 - 40883976
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggat-agatgaaaaaacaattcg 128  Q
    ||||||||| ||||||||||||||||||||||||| | | ||||||||||||||    
T  40883923 cagaaaataagtgaaatcacttattcaattaggataaaaggaaaaaacaattcg 40883976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 53155488 - 53155537
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    |||||||||||||||||||||| |||||||||| | | ||||||||||||    
T  53155488 aaaatatgtgaaatcacttattgaattaggatataaggaaaaacaattcg 53155537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 11819154 - 11819102
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||| | |||| | |||||||| ||||||    
T  11819154 aaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggag 11819102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 30156340 - 30156372
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggata 111  Q
    |||||||||||||||||||||||||||||||||    
T  30156340 aaaatatgtgaaatcacttattcaattaggata 30156372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 4206607 - 4206658
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| ||||||||||| | |||||| ||||| ||||||||||    
T  4206607 aaaaacaattcggaggggtgattttttgatcaaaattgaccataaatcaccc 4206658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 32080809 - 32080864
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||| |||||||||| | |||| | |||||||| ||||||    
T  32080809 cagaaaatatgtgaaatcacctattcaattaaggtagaaggaaaaacaaatcggag 32080864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 55090638 - 55090693
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||| ||||| | |||| | |||||||| ||||||    
T  55090638 cagaaaatatgtgaaatcacttatttaattaaggtagaaggaaaaacaaatcggag 55090693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 111
Target Start/End: Original strand, 4817886 - 4817920
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggata 111  Q
    ||||||||||||||||||| |||||||||||||||    
T  4817886 agaaaatatgtgaaatcacctattcaattaggata 4817920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 14585495 - 14585437
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||  || | |||||||||||||||||| |||| ||||||||||| ||||||    
T  14585495 aaaaacaatttagaggagtgatttttgggtcaaaattgactctaaatcacccctctgaa 14585437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Original strand, 34103772 - 34103802
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaatta 106  Q
    |||||||||||||||||||||||||||||||    
T  34103772 cagaaaatatgtgaaatcacttattcaatta 34103802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 48854939 - 48854889
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    |||||||| ||||| ||||||||||||||| |||| |||||| ||||||||    
T  48854939 aaaaacaaatcggaggggtgatttttgggttaaaattgacccaaaatcacc 48854889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 19861386 - 19861423
Alignment:
Q  17 atgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  19861386 atgggtgatttttgagtcaaaattgaccctaaatcacc 19861423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 55090679 - 55090736
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||||||||  ||| | |||||||||||||| |||||    
T  55090679 aaaaacaaatcggaggggtgatttttgggttgaaattaaccctaaatcacccctctga 55090736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 2147799 - 2147763
Alignment:
Q  78 gaaaatatgtg-aaatcacttattcaattaggataga 113  Q
    ||||||||||| |||||||||||||||||||||||||    
T  2147799 gaaaatatgtggaaatcacttattcaattaggataga 2147763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 48400970 - 48400922
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    |||||||||||||||||||||| || |||| |||| | |||||||||||    
T  48400970 aaaatatgtgaaatcacttattaaaatagggtagaaggaaaaacaattc 48400922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 8e-17; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 7060395 - 7060343
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  7060395 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggag 7060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 22757165 - 22757113
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  22757165 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggag 22757113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 394362 - 394413
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  394362 aaaaacaattcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 26742551 - 26742602
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  26742551 aaaaacaattcggatgggtgatttttgggtcaaaattgatcctaaatcaccc 26742602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 51152199 - 51152144
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  51152199 cagaaaatatgtgaaatcacttattaaattaggatagaaggaaaaacaattcggag 51152144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20399988 - 20400046
Alignment:
Q  1 agaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttct 59  Q
    ||||||| |||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  20399988 agaaaaagcaattcgggtgggtgatttttgggtcaaaattgaccctaaatcgcccttct 20400046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 24825722 - 24825668
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  24825722 agaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 24825668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 31522051 - 31522001
Alignment:
Q  81 aatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  31522051 aatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcggag 31522001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 20399950 - 20400003
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgg 129  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  20399950 cagaaaatatatgaaatcacttattcaattaggatagaagaaaaagcaattcgg 20400003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 24100212 - 24100159
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||||||||    
T  24100212 agaaaatatgtgaaatcacttattcaattacgatagaaggaaaaacaattcgga 24100159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 43244430 - 43244479
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  43244430 gaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaattc 43244479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 43493337 - 43493389
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  43493337 aaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaattcggag 43493389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 394321 - 394376
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||| ||||||||||||||||| |||||||||||| | |||||||||||||||    
T  394321 cagaaaagatgtgaaatcacttattgaattaggatagaaggaaaaacaattcggag 394376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 13965629 - 13965582
Alignment:
Q  81 aatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  13965629 aatatgtgaaatcacttattcaattaggatagaaggaaaaacaattcg 13965582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 29268824 - 29268879
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||| ||||||    
T  29268824 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaactcggag 29268879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 31522015 - 31521964
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  31522015 aaaaacaattcggaggggtgatttttaggtcaaaattgaccctaaatcaccc 31521964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 43244469 - 43244520
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  43244469 aaaaacaattcagaggggtgatttttgggtcaaaattgaccctaaatcaccc 43244520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 50801291 - 50801236
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||| | | ||||| |||||||||    
T  50801291 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaataattcggag 50801236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 478059 - 478113
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||| ||||||||||||||||||||||| | | ||||||||||||||    
T  478059 cagaaaatatgtaaaatcacttattcaattaggatataaggaaaaacaattcgga 478113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 7060357 - 7060299
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||||||    
T  7060357 aaaaacaattcggaggggtgatttttgggttaaaattgaccctaaattacccctctgaa 7060299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 7083864 - 7083914
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  7083864 agaaaatatgtgaaatcacttattcaattatgatagaaggaaaaacaattc 7083914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 13586288 - 13586338
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaatt 126  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||||    
T  13586288 cagaaaatatgtgaaatcacttattcaattacgatataagaaaaaacaatt 13586338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 19745463 - 19745409
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||| |||||||||||||||| | | ||||||||||||||    
T  19745463 cagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaattcgga 19745409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 19794343 - 19794397
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||| |||||||||||||||| | | ||||||||||||||    
T  19794343 cagaaaatatgtgaaatcaattattcaattaggataaaagcaaaaacaattcgga 19794397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22757127 - 22757069
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||||||||||||  ||||||||||| ||||||| |||||||||||||||| ||||||    
T  22757127 aaaaacaattcggagtggtgatttttgagtcaaaattgaccctaaatcacccctctgaa 22757069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 24568801 - 24568859
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||| |||||||| |||||||||||||||||||| | |||||||||||||| ||||||    
T  24568801 aaaaataattcggaagggtgatttttgggtcaaaattcaccctaaatcacccctctgaa 24568859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 26742510 - 26742564
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||||||||||||||||||||||| ||||||   ||||||||||||||    
T  26742510 cagaaaatatgtgaaatcacttattcaattaagatagaaagaaaaacaattcgga 26742564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 44757092 - 44757137
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||    
T  44757092 aaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaa 44757137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 44757130 - 44757187
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||| |||||||||||||||||||||| ||||| |||||||||| |||||    
T  44757130 aaaaacaactcgaatgggtgatttttgggtcaaaattgaccttaaatcacccctctga 44757187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 6911754 - 6911698
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    ||||||||||||||||||||||||||||||| | |||| | |||||||| |||||||    
T  6911754 cagaaaatatgtgaaatcacttattcaattaaggtagaaggaaaaacaaatcggaga 6911698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 13965593 - 13965545
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatca 52  Q
    |||||||||||| | |||||||||||||||||||| |||||||||||||    
T  13965593 aaaaacaattcgaaggggtgatttttgggtcaaaattgaccctaaatca 13965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 24611847 - 24611883
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggataga 113  Q
    |||||||||||||||||||||||||||||||||||||    
T  24611847 agaaaatatgtgaaatcacttattcaattaggataga 24611883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 25658241 - 25658185
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggaga 132  Q
    ||||||||||||||||||||||||| |||||||| ||| | |||||||||| |||||    
T  25658241 cagaaaatatgtgaaatcacttattaaattaggaaagaaggaaaaacaatttggaga 25658185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 29922910 - 29922874
Alignment:
Q  77 agaaaatatgtgaaatcacttattcaattaggataga 113  Q
    |||||||||||||||||||||||||||||||||||||    
T  29922910 agaaaatatgtgaaatcacttattcaattaggataga 29922874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 51152158 - 51152107
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||| |||||||||||||||||| | ||||| ||||||||||    
T  51152158 aaaaacaattcggaggggtgatttttgggtcaatattgaccntaaatcaccc 51152107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 478100 - 478150
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  478100 aaaaacaattcggatgg-tgatttttgggtcaaaattgaccataaatcaccc 478150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 7861252 - 7861303
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattc 127  Q
    ||||||||||||||||||||||||| |||||||||||| | ||||| |||||    
T  7861252 cagaaaatatgtgaaatcacttatttaattaggatagaaggaaaaataattc 7861303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 8712563 - 8712512
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||  || |||||||||||||||||||| ||||||||||||||||    
T  8712563 aaaaacaattatgaggggtgatttttgggtcaaaattgaccctaaatcaccc 8712512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 19745422 - 19745371
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||||||||    
T  19745422 aaaaacaattcggatgaatgatttttgggtcaaaattgatcctaaatcaccc 19745371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 19794384 - 19794435
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||||||||    
T  19794384 aaaaacaattcggatgaatgatttttgggtcaaaattgatcctaaatcaccc 19794435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 22049453 - 22049504
Alignment:
Q  78 gaaaatatgtg-aaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  22049453 gaaaatatgtggaaatcacttattcaattaggatagaaggaaaaacaattcg 22049504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 24100172 - 24100121
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||||||||||||| |||||||| |||||| ||| ||||||||||||    
T  24100172 aaaaacaattcggatgggtaatttttggttcaaaattgatcctaaatcaccc 24100121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 27394863 - 27394812
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||| ||| |||| |||||||||||||||||||| ||||||||||||||||    
T  27394863 aaaaataatccggaagggtgatttttgggtcaaaattgaccctaaatcaccc 27394812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 39837669 - 39837634
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggata 111  Q
    ||||||||||||||||||||||||||||||||||||    
T  39837669 cagaaaatatgtgaaatcacttattcaattaggata 39837634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 45351158 - 45351205
Alignment:
Q  2 gaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaa 49  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  45351158 gaaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaa 45351205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 45360637 - 45360684
Alignment:
Q  2 gaaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaa 49  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  45360637 gaaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaa 45360684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 626635 - 626693
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    ||||| ||||| ||||||||||||||||||||||| |  ||||||||||||| ||||||    
T  626635 aaaaataattcagatgggtgatttttgggtcaaaattagccctaaatcacccctctgaa 626693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 24568760 - 24568814
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||| ||||||| ||||||||||||||||||||||||| | ||||| ||||||||    
T  24568760 cagataatatgtaaaatcacttattcaattaggatagaaggaaaaataattcgga 24568814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 39523483 - 39523433
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaatt 126  Q
    ||||||| |||||||||||||||||||||||||||| | | ||||||||||    
T  39523483 cagaaaacatgtgaaatcacttattcaattaggataaaaggaaaaacaatt 39523433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 2447867 - 2447822
Alignment:
Q  83 tatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||    
T  2447867 tatgtgaaatcacttattcaattaggatagaaaaaaaaataattcg 2447822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 6882030 - 6881993
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  6882030 cagaaaatatgtgaaatcacttatttaattaggataga 6881993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 12717166 - 12717219
Alignment:
Q  78 gaaaatatgtg-aaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||||| |||||    
T  12717166 gaaaatatgtggaaatcacttatttaattaggatagaagaaaaaacaagtcgga 12717219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 20887849 - 20887889
Alignment:
Q  10 aattcggatgggtgatttttgggtcaaaactgaccctaaat 50  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  20887849 aattcggatgggtgatttttgggtcaaaattgaccttaaat 20887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 26674443 - 26674391
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||| |||||| | |||| ||||| ||||    
T  26674443 aaaatatgtgaaatcacttattcaattatgatagaaggaaaagcaatttggag 26674391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 30202112 - 30202064
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    ||||||||||||||||||||||||||||||| |||| | | ||||||||    
T  30202112 cagaaaatatgtgaaatcacttattcaattaagataaaaggaaaaacaa 30202064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 38944197 - 38944249
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    ||||||||||||||||||||||||| || |||||| | |||||||||| ||||    
T  38944197 aaaatatgtgaaatcacttattcaactacgatagaaggaaaaacaatttggag 38944249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 6911713 - 6911662
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||| |||||  |||||||||||| |||||| ||||||||||||||||    
T  6911713 aaaaacaaatcggagaggtgatttttggatcaaaattgaccctaaatcaccc 6911662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 8712601 - 8712554
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaatt 126  Q
    |||||||||||||||||||| |||| ||||||||| | ||||||||||    
T  8712601 aaaatatgtgaaatcacttactcaactaggatagaaggaaaaacaatt 8712554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 11210401 - 11210452
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||| |||||||| ||||||||||| || ||||| ||||||||||||||||    
T  11210401 aaaaataattcggaggggtgatttttagggcaaaattgaccctaaatcaccc 11210452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 39837612 - 39837569
Alignment:
Q  19 gggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||    
T  39837612 gggtgatttttgggtcaaaattgacgctaaatcacccctctgaa 39837569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 26674405 - 26674347
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||| ||||| ||| ||||||||||| |||||||| ||| |||||||||||| ||||||    
T  26674405 aaaagcaatttggaggggtgatttttaggtcaaaattgatcctaaatcacccatctgaa 26674347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 8517503 - 8517540
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggataga 113  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  8517503 cagaaaatatgtaaaatcacttattcaattagaataga 8517540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 22049493 - 22049545
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccctt 57  Q
    |||||||||||| | |||||||||| ||||||||| | ||||||||||||||||    
T  22049493 aaaaacaattcgaaagggtgatttt-gggtcaaaattaaccctaaatcaccctt 22049545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 45351117 - 45351174
Alignment:
Q  76 cagaaaatatgtgaaatcacttattc-aattaggat-agatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||| |||||| || | | |||||||||||||||||    
T  45351117 cagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggag 45351174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 45360596 - 45360653
Alignment:
Q  76 cagaaaatatgtgaaatcacttattc-aattaggat-agatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||| |||||| || | | |||||||||||||||||    
T  45360596 cagaaaatatgtgaaatcacttattcaaattagaataaaaggaaaaaacaattcggag 45360653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 626596 - 626639
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaa 120  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||    
T  626596 cagaaaatatgtgaa-tcacttattcaattatgatagaagaaaaa 626639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 7171 - 7226
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||||||||    
T  7171 cagaaaatatgtgaaatcacttattcaattaggataaaaggaaaaacaattcggag 7226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 7212 - 7245
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaa 37  Q
    |||||||||||||| |||||||||||||||||||    
T  7212 aaaaacaattcggaggggtgatttttgggtcaaa 7245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 6211 - 6156
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  6211 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaacaactcggag 6156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 6170 - 6113
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||    
T  6170 aaaaacaactcggaggggtgatttttgggtcaaaattgaccctaaatcacccctctga 6113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 35115 - 35065
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  35115 aaaaacaactcggatgggtgatttttgggtcaaaattgaccctaaatcacc 35065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 35150 - 35102
Alignment:
Q  82 atatgtgaaatcacttattcaattaggatagatgaaaaaacaattcgga 130  Q
    |||||||||||||||||||||||||||||||| | |||||||| |||||    
T  35150 atatgtgaaatcacttattcaattaggatagaaggaaaaacaactcgga 35102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 13336 - 13387
Alignment:
Q  3 aaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacc 54  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  13336 aaaaaacaattcggaggggtgatttttggatcaaaattgaccctaaatcacc 13387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 111
Target Start/End: Original strand, 13292 - 13327
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggata 111  Q
    ||||||| ||||||||||||||||||||||||||||    
T  13292 cagaaaagatgtgaaatcacttattcaattaggata 13327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 1135 - 1185
Alignment:
Q  78 gaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaattcg 128  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||||    
T  1135 gaaaatatgtgaaatcacttattcaattagggtagaaggaaaaacaattcg 1185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 1174 - 1231
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||||||| | |||||||||||||||||||| ||||| |||||||||| |||||    
T  1174 aaaaacaattcgcaggggtgatttttgggtcaaaattgaccttaaatcacccctctga 1231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 46 - 1
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||    
T  46 aaaatatgtgaaatcacttattcaattaagatagaaggaaaaacaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 2976 - 2919
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatg--aaaaaacaattcggag 131  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||||| ||||||    
T  2976 cagaaaatatgtgaaatcacttattcaattaggatagaaggaaaaaaacaactcggag 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 2934 - 2882
Alignment:
Q  3 aaaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||    
T  2934 aaaaaacaactcggaggggtgattattgggtcaaaattgaccctaaatcaccc 2882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 404305 - 404341
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatag 112  Q
    |||||||||||||||||||||||||||||||||||||    
T  404305 cagaaaatatgtgaaatcacttattcaattaggatag 404341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 404346 - 404404
Alignment:
Q  4 aaaaacaattcggatgggtgatttttgggtcaaaactgaccctaaatcacccttctgaa 62  Q
    |||||| ||||||||||||||||||||| |||||| ||||| |||||| ||| ||||||    
T  404346 aaaaactattcggatgggtgatttttggatcaaaattgaccttaaatcgcccctctgaa 404404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 2464 - 2512
Alignment:
Q  76 cagaaaatatgtgaaatcacttattcaattaggatagatgaaaaaacaa 124  Q
    |||||||||||||||||||||||||| |||| |||||| | ||||||||    
T  2464 cagaaaatatgtgaaatcacttattcgattatgatagaaggaaaaacaa 2512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 2519 - 2555
Alignment:
Q  19 gggtgatttttgggtcaaaactgaccctaaatcaccc 55  Q
    |||||||||||||||||||| ||||||||||||||||    
T  2519 gggtgatttttgggtcaaaaatgaccctaaatcaccc 2555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 4117 - 4151
Alignment:
Q  79 aaaatatgtgaaatcacttattcaattaggataga 113  Q
    |||||||||||||||||||||| ||||||||||||    
T  4117 aaaatatgtgaaatcacttatttaattaggataga 4151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 4171 - 4211
Alignment:
Q  21 gtgatttttgggtcaaaactgaccctaaatcacccttctga 61  Q
    |||||||||| ||||||| ||||||||||||| ||||||||    
T  4171 gtgatttttgtgtcaaaattgaccctaaatcagccttctga 4211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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