View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16688_high_18 (Length: 445)

Name: NF16688_high_18
Description: NF16688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16688_high_18
NF16688_high_18
[»] chr6 (9 HSPs)
chr6 (4-427)||(13609351-13609774)
chr6 (275-372)||(33389563-33389660)
chr6 (293-372)||(31561319-31561398)
chr6 (294-372)||(33287033-33287111)
chr6 (290-372)||(33411444-33411526)
chr6 (294-366)||(9168268-9168340)
chr6 (87-155)||(31561110-31561178)
chr6 (290-358)||(33059068-33059136)
chr6 (308-372)||(33305977-33306041)
[»] chr4 (16 HSPs)
chr4 (4-424)||(31245300-31245720)
chr4 (213-378)||(31527888-31528053)
chr4 (290-366)||(31019291-31019367)
chr4 (290-372)||(31029166-31029248)
chr4 (270-378)||(31033496-31033603)
chr4 (290-360)||(31477478-31477548)
chr4 (293-366)||(31158740-31158813)
chr4 (30-155)||(31158951-31159076)
chr4 (30-155)||(31489919-31490044)
chr4 (27-162)||(31019495-31019630)
chr4 (27-162)||(31029376-31029511)
chr4 (275-372)||(31149833-31149930)
chr4 (294-361)||(31502606-31502671)
chr4 (30-60)||(31477218-31477248)
chr4 (30-60)||(31502340-31502370)
chr4 (18-54)||(31033784-31033820)
[»] chr7 (2 HSPs)
chr7 (4-279)||(14724579-14724851)
chr7 (345-427)||(14724899-14724981)
[»] chr5 (2 HSPs)
chr5 (26-279)||(17598911-17599168)
chr5 (345-402)||(17598806-17598863)
[»] chr2 (1 HSPs)
chr2 (290-374)||(17439335-17439419)
[»] scaffold0428 (1 HSPs)
scaffold0428 (290-360)||(8263-8333)


Alignment Details
Target: chr6 (Bit Score: 416; Significance: 0; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 4 - 427
Target Start/End: Original strand, 13609351 - 13609774
Alignment:
Q  4 atgtcgaagaaaatcccttgtagttcttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtctaggttcagggagtaga 103  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609351 atgtcaaataaaatcccttgtagttcttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtctaggttcagggagtaga 13609450  T
Q  104 attatcgtaatttctagagatggccatatcttgagagagcatggagtagatgaaatttatgaagtacgagcattagatcttaatgatgcccttcgattgt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609451 attatcgtaatttctagagatggccatatcttgagagagcatggagtagatgaaatttatgaagtacgagcattagatcttaatgatgcccttcgattgt 13609550  T
Q  204 tttgtaggaaagctttcaaaagtgatgatatcttgagtggttatgcagacttgacatatgatgtactaaaatatgctgatggcattccactagcaattga 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609551 tttgtaggaaagctttcaaaagtgatgatatcttgagtggttatgcagacttgacatatgatgtactaaaatatgctgatggcattccactagcaattga 13609650  T
Q  304 agtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagagagaatcccatggcagaaattatggatgtacta 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13609651 agtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagagagaatcccatggcagaaattatggatgtacta 13609750  T
Q  404 cggcttagttatgatggactaaag 427  Q
    ||||||||||||||||||||||||    
T  13609751 cggcttagttatgatggactaaag 13609774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 372
Target Start/End: Complemental strand, 33389660 - 33389563
Alignment:
Q  275 tatgctgatggcattccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagaga 372  Q
    |||||| ||||  |||||||||||||| |||| |||||||||||||||| ||||||  ||||  |||||||||  ||||||||||| ||||| |||||    
T  33389660 tatgctaatggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgactgaatggaagagtgcattggctagattgagaga 33389563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 372
Target Start/End: Original strand, 31561319 - 31561398
Alignment:
Q  293 ctagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagaga 372  Q
    |||||||||  ||| |||||||||||||||| ||||||  ||||  |||||||||  ||||||||| ||||||| |||||    
T  31561319 ctagcaattacagtattgggctcatttttgtttggtcgtaatgtgactgaatggaagagtgcattgtccagattgagaga 31561398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 372
Target Start/End: Complemental strand, 33287111 - 33287033
Alignment:
Q  294 tagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagaga 372  Q
    |||||||| |||| |||||||||||||||| ||||||  ||||  | |||||||  ||||||||| | |||||||||||    
T  33287111 tagcaattaaagtattgggctcatttttgtttggtcgtaatgtgacggaatggaagagtgcattgactagattaagaga 33287033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 372
Target Start/End: Complemental strand, 33411526 - 33411444
Alignment:
Q  290 ccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagaga 372  Q
    |||||||||||| |||| |||||||||||||||| |||||    |||  |||||||||  ||||||||||| ||||| |||||    
T  33411526 ccactagcaattaaagtattgggctcatttttgtttggtcatagtgtggctgaatggaagagtgcattggctagattgagaga 33411444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 9168340 - 9168268
Alignment:
Q  294 tagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagatt 366  Q
    |||||||| |||| |||||||||||||||| ||||||  ||||  ||||||| |  ||||||||||| |||||    
T  9168340 tagcaattaaagtattgggctcatttttgtttggtcgtaatgtgactgaatgcaagagtgcattggctagatt 9168268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 31561110 - 31561178
Alignment:
Q  87 taggttcagggagtagaattatcgtaatttctagagatggccatatcttgagagagcatggagtagatg 155  Q
    ||||| ||||||||||||||||  | |||||||||||||  ||||| |||| |||| ||||||| ||||    
T  31561110 taggtgcagggagtagaattattatcatttctagagatgagcatatattgaaagagtatggagtggatg 31561178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 33059136 - 33059068
Alignment:
Q  290 ccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattg 358  Q
    |||||||||||| |||| |||||||| ||||||| ||||||  ||||  |||||||||  |||||||||    
T  33059136 ccactagcaattaaagtattgggctcgtttttgtttggtcgtaatgtgactgaatggaagagtgcattg 33059068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 33306041 - 33305977
Alignment:
Q  308 ttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagaga 372  Q
    |||||||||||||||| ||||||  ||||  |||||||||  ||||||||||| ||||| |||||    
T  33306041 ttgggctcatttttgtttggtcgtaatgtgactgaatggaagagtgcattggctagattgagaga 33305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 424
Target Start/End: Original strand, 31245300 - 31245720
Alignment:
Q  4 atgtcgaagaaaatcccttgtagttcttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtctaggttcagggagtaga 103  Q
    ||||| || |||||||||| |||||||||||||||||||| |||||||||||||||||||| |||  || ||||||||||| |||||  |||||||||||    
T  31245300 atgtcaaataaaatcccttatagttcttgataatgttgatcaagttgaacaactggataaattggctatgacacgagaatggctaggcacagggagtaga 31245399  T
Q  104 attatcgtaatttctagagatggccatatcttgagagagcatggagtagatgaaatttatgaagtacgagcattagatcttaatgatgcccttcgattgt 203  Q
    || ||| |||||||||||||||  |||||||||||||||||||||||||||||| | ||  |||| |||   || |||| |||| ||||||||| |||||    
T  31245400 atcatcataatttctagagatgttcatatcttgagagagcatggagtagatgaagtgtacaaagttcgactcttggatcataataatgcccttcaattgt 31245499  T
Q  204 tttgtaggaaagctttcaaaagtgatgatatcttgagtggttatgcagacttgacatatgatgtactaaaatatgctgatggcattccactagcaattga 303  Q
    |||||||||| |||||||| |||||||||||| |||| |||||   | |||||||| |||||| ||||| ||||||  ||||| ||||| |||||||| |    
T  31245500 tttgtaggaaggctttcaagagtgatgatatcatgagcggttacatatacttgacagatgatgcactaacatatgccaatggccttccattagcaattaa 31245599  T
Q  304 agtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagagagaatcccatggcagaaattatggatgtacta 403  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| || || | | |||| ||||||||||||||     
T  31245600 agttttgggctcatttttgtatggccgagatgtctctgaatggagaagtgcattggcaaggttaagagaaaacccaaggacagatattatggatgtactt 31245699  T
Q  404 cggcttagttatgatggacta 424  Q
    ||  |||||| ||||||||||    
T  31245700 cgaattagttttgatggacta 31245720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 213 - 378
Target Start/End: Complemental strand, 31528053 - 31527888
Alignment:
Q  213 aagctttcaaaagtgatgatatcttgagtggttatgcagacttgacatatgatgtactaaaatatgctgatggcattccactagcaattgaagtgttggg 312  Q
    ||||||||||| ||||| |||| ||||||  |||||  || |||  ||||||  ||||||| |||||| ||||| | |||||||| ||| |||  |||||    
T  31528053 aagctttcaaacgtgataatattttgagtaattatgacgagttggtatatgagatactaaattatgctaatggcttaccactagcgattaaagcattggg 31527954  T
Q  313 ctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagagagaatcc 378  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||| | ||||| ||||| |||||    
T  31527953 ctcatttttgtttggtcgagatatttatgaatggagaagtgcattgactagattgagagacaatcc 31527888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 290 - 366
Target Start/End: Complemental strand, 31019367 - 31019291
Alignment:
Q  290 ccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagatt 366  Q
    |||||||||||| |||| |||||||||||||||| |||||||||| |||| |||||||||||||||||||| |||||    
T  31019367 ccactagcaattaaagtattgggctcatttttgtttggtcgagatatctccgaatggagaagtgcattggctagatt 31019291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 372
Target Start/End: Complemental strand, 31029248 - 31029166
Alignment:
Q  290 ccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagaga 372  Q
    |||||||| ||| |||| |||||||||||||||| |||||||||| |||||||||||||||||  |||||| ||||| |||||    
T  31029248 ccactagctattaaagtattgggctcatttttgtttggtcgagatatctctgaatggagaagtaaattggctagattgagaga 31029166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 378
Target Start/End: Complemental strand, 31033603 - 31033496
Alignment:
Q  270 taaaatatgctgatggcattccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaag 369  Q
    |||| |||| ||||||| | ||||  |||||| |||| ||||||||||||| || ||||||| || |||||||||||| |||||||||||| ||||| ||    
T  31033603 taaattatgttgatggcctaccaccggcaattaaagtattgggctcatttt-gtgtggtcgaaatatctctgaatggacaagtgcattggctagattgag 31033505  T
Q  370 agagaatcc 378  Q
    ||| |||||    
T  31033504 agaaaatcc 31033496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 31477478 - 31477548
Alignment:
Q  290 ccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggc 360  Q
    ||||| |||||| |||| ||||| |||||||||| |||||| ||| | |||||||||||||||||||||||    
T  31477478 ccacttgcaattaaagtattgggttcatttttgtttggtcgggatatatctgaatggagaagtgcattggc 31477548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 366
Target Start/End: Complemental strand, 31158813 - 31158740
Alignment:
Q  293 ctagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagatt 366  Q
    ||||||||| |||| ||||| |||||||||| |||||||||  ||| |||||||| |||||||||||| |||||    
T  31158813 ctagcaattaaagtattgggatcatttttgtttggtcgagacatctatgaatggaaaagtgcattggctagatt 31158740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 31159076 - 31158951
Alignment:
Q  30 ttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtctaggttcagggagtagaattatcgtaatttctagagatggcca 129  Q
    |||||||||||||||||||||||||||| |||||| | |   | |  || |||||  ||||| |||||||||||||  |  |||||||||||||||  ||    
T  31159076 ttgataatgttgataaagttgaacaacttgataaattagctgtgaatcgtgaatgcttaggtgcagggagtagaatcgttataatttctagagatgaaca 31158977  T
Q  130 tatcttgagagagcatggagtagatg 155  Q
    |||||||| |||| ||||||| ||||    
T  31158976 tatcttgaaagagtatggagttgatg 31158951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 31489919 - 31490044
Alignment:
Q  30 ttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtctaggttcagggagtagaattatcgtaatttctagagatggcca 129  Q
    ||||||||||||||||||||| |||||| |||||| |||   | |  || |||||  ||||| ||||||||||||| ||  |||||||| ||||||  ||    
T  31489919 ttgataatgttgataaagttggacaacttgataaattgggtgtgaatcgtgaatggttaggtgcagggagtagaatcattataatttctggagatgaaca 31490018  T
Q  130 tatcttgagagagcatggagtagatg 155  Q
    |||||||| |||| ||||||| ||||    
T  31490019 tatcttgaaagagtatggagttgatg 31490044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 31019630 - 31019495
Alignment:
Q  27 ttcttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtctaggttcagggagtagaattatcgtaatttctagagatgg 126  Q
    |||| ||||||||||||||||||||||| || |||||  | |   |||  || |||||| |||||  |||||||||||| ||  |||||||||||||||     
T  31019630 ttctcgataatgttgataaagttgaacagctcgataagttagctttaaatcgtgaatgtttaggtgtagggagtagaatcattataatttctagagatga 31019531  T
Q  127 ccatatcttgagagagcatggagtagatgaaattta 162  Q
     ||||||||||  ||| ||||||| |||||| ||||    
T  31019530 gcatatcttgaatgagtatggagttgatgaagttta 31019495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 31029511 - 31029376
Alignment:
Q  27 ttcttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtctaggttcagggagtagaattatcgtaatttctagagatgg 126  Q
    |||| ||||||||||||||||||||||| || |||||  | |   |||  || |||| | ||||| ||||||||||||| ||  |||||||||||||||     
T  31029511 ttctcgataatgttgataaagttgaacagctcgataagttagctttaaatcgtgaatatttaggtgcagggagtagaatcattataatttctagagatga 31029412  T
Q  127 ccatatcttgagagagcatggagtagatgaaattta 162  Q
     ||||||||||  ||| ||||||| |||||| ||||    
T  31029411 gcatatcttgaatgagtatggagttgatgaagttta 31029376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 372
Target Start/End: Complemental strand, 31149930 - 31149833
Alignment:
Q  275 tatgctgatggcattccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagaga 372  Q
    |||||| ||||| | || ||||||||| |||| || ||||| |||||||||| |||| || | | |||||||| |||||||||||| ||||| |||||    
T  31149930 tatgctaatggcctacctctagcaattaaagtattaggctcgtttttgtatgatcgaaatatttttgaatggaaaagtgcattggcaagattgagaga 31149833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 31502606 - 31502671
Alignment:
Q  294 tagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggcc 361  Q
    ||||||||||||| | |||||||||||||  |||||||||  ||| |||||||| |||||||||||||    
T  31502606 tagcaattgaagtatagggctcatttttg--tggtcgagacatctttgaatggaaaagtgcattggcc 31502671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 31477218 - 31477248
Alignment:
Q  30 ttgataatgttgataaagttgaacaactgga 60  Q
    |||||||||||||||||||||||||||||||    
T  31477218 ttgataatgttgataaagttgaacaactgga 31477248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 31502340 - 31502370
Alignment:
Q  30 ttgataatgttgataaagttgaacaactgga 60  Q
    |||||||||||||||||||||||||||||||    
T  31502340 ttgataatgttgataaagttgaacaactgga 31502370  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 31033820 - 31033784
Alignment:
Q  18 cccttgtagttcttgataatgttgataaagttgaaca 54  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  31033820 cccttctagttcttgataatgttgatcaagttgaaca 31033784  T

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Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 279
Target Start/End: Original strand, 14724579 - 14724851
Alignment:
Q  4 atgtcgaagaaaatcccttgtagttcttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtctaggttcagggagtaga 103  Q
    ||||| || |||||| |||| |||||||||||||||| |   |||||||||||| || ||| ||| ||| | | || |||| |||||  |||| ||||||    
T  14724579 atgtcaaataaaatctcttgaagttcttgataatgttca---agttgaacaacttgaaaaattggccatgaaatgataatggctaggcacaggaagtaga 14724675  T
Q  104 attatcgtaatttctagagatggccatatcttgagagagcatggagtagatgaaatttatgaagtacgagcattagatcttaatgatgcccttcgattgt 203  Q
    || |||||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||  |||| |||    || ||| |||||||||||||| |||||    
T  14724676 atcatcgtaatatctagagatagccatatcttcagagagcatggagtagatgaagtttacaaagttcgactcataaatcataatgatgcccttcaattgt 14724775  T
Q  204 tttgtaggaaagctttcaaaagtgatgatatcttgagtggttatgcagacttgacatatgatgtactaaaatatgc 279  Q
    |||||||||||||||| |||| ||| ||| || |||| |||||   | ||| |||| ||||||||||  |||||||    
T  14724776 tttgtaggaaagctttaaaaattgacgatgtcatgagcggttacataaactcgacagatgatgtactcgaatatgc 14724851  T

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Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 14724899 - 14724981
Alignment:
Q  345 ggagaagtgcattggccagattaagagagaatcccatggcagaaattatggatgtactacggcttagttatgatggactaaag 427  Q
    ||||||||| |||||| ||||||||||||||||| | |||||| |||||||||||||| ||  |||||| ||| |||||||||    
T  14724899 ggagaagtgtattggcaagattaagagagaatccaagggcagatattatggatgtacttcgaattagttttgaaggactaaag 14724981  T

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Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 279
Target Start/End: Complemental strand, 17599168 - 17598911
Alignment:
Q  26 gttcttgataatgttgataaagttgaacaactggataaactggacataacacgagaatgtct----aggttcagggagtagaattatcgtaatttctaga 121  Q
    ||||||||||||||| || |||||||||||||||| ||| ||| ||| | | ||||||| ||    |||  || | |||||||| |||||||| ||||||    
T  17599168 gttcttgataatgttcatcaagttgaacaactggaaaaattggccatgaaatgagaatggctggctaggcacaagaagtagaatcatcgtaatatctaga 17599069  T
Q  122 gatggccatatcttgagagagcatggagtagatgaaatttatgaagtacgagcattagatcttaatgatgcccttcgattgttttgtaggaaagctttca 221  Q
    ||| |||||||||| ||||||||||||||||||||| ||||  |||| |||    || ||| |||||||||||||| ||||||||||||||||||||| |    
T  17599068 gatagccatatcttcagagagcatggagtagatgaagtttacaaagttcgactcataaatcataatgatgcccttcaattgttttgtaggaaagctttaa 17598969  T
Q  222 aaagtgatgatatcttgagtggttatgcagacttgacatatgatgtactaaaatatgc 279  Q
    ||| ||| ||| || |||| |||||   | ||| |||| ||||||||||  |||||||    
T  17598968 aaattgacgatgtcatgagcggttacataaactcgacagatgatgtactcgaatatgc 17598911  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 17598863 - 17598806
Alignment:
Q  345 ggagaagtgcattggccagattaagagagaatcccatggcagaaattatggatgtact 402  Q
    ||||||||| |||||| ||||||||||||||||| | |||||| ||||||||||||||    
T  17598863 ggagaagtgtattggcaagattaagagagaatccaagggcagatattatggatgtact 17598806  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 374
Target Start/End: Original strand, 17439335 - 17439419
Alignment:
Q  290 ccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagagaga 374  Q
    |||||||||||| ||||  ||||||||||||||| |||| |  ||||  |||||||||  ||||||||||| ||||| |||||||    
T  17439335 ccactagcaattaaagtaatgggctcatttttgtttggttgtaatgtgactgaatggaagagtgcattggctagattgagagaga 17439419  T

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Target: scaffold0428 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 8333 - 8263
Alignment:
Q  290 ccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggc 360  Q
    ||||||||||||  ||| |||||||||||||||| ||||||  ||||  |||||||||  |||||||||||    
T  8333 ccactagcaattacagtattgggctcatttttgtctggtcgtaatgtgactgaatggaagagtgcattggc 8263  T

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