View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16688_low_65 (Length: 259)
Name: NF16688_low_65
Description: NF16688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16688_low_65 |
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Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 26540882 - 26541080
Alignment:
| Q |
19 |
agacaggaccacctttaccagcaggatcatggaccttctcttgcagcttatcaacttgaatgccaccttgatcttcctttgaaaacaaatcagttcttgt |
118 |
Q |
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| T |
26540882 |
agacaggaccaccttttccagcaggatcatggaccttctcttgcagcttatcaacttgaatgccaccttgatcttcctttgaaaacaaatcagttcttgt |
26540981 |
T |
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| Q |
119 |
acgattttctcctccttctattgattcatatattgttgctgtctttgactcttttggttgtgctccttgtgccccagacatgttctttcactcttttat |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26540982 |
acgattttctcctccttctattgattcatatattgttgctgtctttgactcttttggttgtgctccttgtgccccagacatgttctttcactcttttat |
26541080 |
T |
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