View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16691_low_8 (Length: 279)

Name: NF16691_low_8
Description: NF16691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16691_low_8
NF16691_low_8
[»] scaffold0177 (1 HSPs)
scaffold0177 (23-153)||(1182-1314)
[»] chr4 (52 HSPs)
chr4 (26-153)||(15385214-15385341)
chr4 (20-153)||(4863293-4863426)
chr4 (26-153)||(15236051-15236179)
chr4 (18-153)||(5202279-5202416)
chr4 (18-153)||(14661078-14661215)
chr4 (27-148)||(24584216-24584339)
chr4 (27-148)||(24599043-24599166)
chr4 (18-153)||(22729267-22729404)
chr4 (30-153)||(15217306-15217429)
chr4 (18-153)||(1640842-1640980)
chr4 (18-153)||(14654751-14654888)
chr4 (18-153)||(34269610-34269747)
chr4 (18-153)||(5315000-5315135)
chr4 (18-153)||(19641912-19642049)
chr4 (26-153)||(13438772-13438902)
chr4 (18-147)||(18467263-18467393)
chr4 (18-153)||(14673195-14673332)
chr4 (18-153)||(26141238-26141377)
chr4 (27-153)||(26463510-26463638)
chr4 (77-147)||(26409241-26409311)
chr4 (18-153)||(1668661-1668804)
chr4 (18-147)||(16276392-16276523)
chr4 (18-153)||(40466271-40466408)
chr4 (27-153)||(18029971-18030099)
chr4 (18-147)||(15198049-15198182)
chr4 (52-147)||(20755166-20755264)
chr4 (18-147)||(46658053-46658185)
chr4 (18-153)||(9250123-9250250)
chr4 (52-153)||(12783437-12783541)
chr4 (18-153)||(15271216-15271352)
chr4 (26-148)||(17084684-17084811)
chr4 (18-153)||(40560769-40560896)
chr4 (52-147)||(15378209-15378305)
chr4 (52-147)||(15398144-15398240)
chr4 (18-153)||(30276054-30276182)
chr4 (90-153)||(22113860-22113923)
chr4 (18-153)||(34196173-34196302)
chr4 (17-91)||(6559412-6559488)
chr4 (109-153)||(1893676-1893720)
chr4 (109-153)||(15301541-15301585)
chr4 (18-153)||(17007281-17007408)
chr4 (238-279)||(5492663-5492704)
chr4 (238-279)||(11925674-11925715)
chr4 (109-153)||(1908477-1908521)
chr4 (77-145)||(15402061-15402129)
chr4 (18-153)||(16247115-16247245)
chr4 (109-153)||(17021327-17021371)
chr4 (113-151)||(14241530-14241568)
chr4 (53-153)||(20306557-20306648)
chr4 (18-91)||(34846160-34846234)
chr4 (52-132)||(15370574-15370654)
chr4 (238-279)||(21534166-21534207)
[»] chr2 (44 HSPs)
chr2 (26-153)||(29441926-29442053)
chr2 (26-153)||(10117654-10117780)
chr2 (26-153)||(17257971-17258098)
chr2 (18-153)||(5393503-5393639)
chr2 (26-153)||(21695203-21695331)
chr2 (26-153)||(21709933-21710061)
chr2 (17-153)||(18083565-18083702)
chr2 (26-145)||(19799345-19799464)
chr2 (18-153)||(17630158-17630295)
chr2 (18-152)||(27685652-27685788)
chr2 (18-153)||(15715700-15715837)
chr2 (18-153)||(20846120-20846257)
chr2 (18-153)||(27426297-27426434)
chr2 (18-153)||(27441339-27441476)
chr2 (18-153)||(26622660-26622798)
chr2 (18-153)||(28875302-28875440)
chr2 (18-153)||(28890512-28890650)
chr2 (18-153)||(39755161-39755299)
chr2 (18-153)||(40792784-40792922)
chr2 (18-153)||(13062804-13062941)
chr2 (18-153)||(26268033-26268170)
chr2 (18-153)||(32238817-32238954)
chr2 (41-153)||(23119123-23119235)
chr2 (18-153)||(28273189-28273327)
chr2 (18-153)||(27398427-27398562)
chr2 (27-153)||(37872607-37872735)
chr2 (18-147)||(19448416-19448547)
chr2 (18-147)||(19463226-19463357)
chr2 (77-153)||(40196321-40196398)
chr2 (18-153)||(12648695-12648823)
chr2 (52-147)||(19561917-19562013)
chr2 (18-153)||(34308704-34308832)
chr2 (18-153)||(24042967-24043094)
chr2 (18-153)||(28271733-28271862)
chr2 (27-153)||(4729771-4729891)
chr2 (18-153)||(34265887-34266015)
chr2 (18-153)||(27387356-27387501)
chr2 (109-147)||(19465691-19465729)
chr2 (242-279)||(13820694-13820731)
chr2 (18-106)||(12663690-12663781)
chr2 (18-91)||(8704676-8704750)
chr2 (238-279)||(31865656-31865698)
chr2 (238-279)||(31895847-31895889)
chr2 (109-147)||(32679587-32679625)
[»] chr6 (78 HSPs)
chr6 (18-153)||(18693293-18693428)
chr6 (26-153)||(14852417-14852545)
chr6 (26-153)||(30723038-30723166)
chr6 (26-153)||(25177347-25177475)
chr6 (18-153)||(26911722-26911857)
chr6 (18-153)||(26929009-26929144)
chr6 (27-153)||(24311606-24311734)
chr6 (18-153)||(16347568-16347706)
chr6 (18-153)||(26982217-26982355)
chr6 (18-153)||(27033277-27033415)
chr6 (18-153)||(22941841-22941978)
chr6 (18-153)||(23864285-23864422)
chr6 (72-153)||(28199313-28199394)
chr6 (18-153)||(34473667-34473804)
chr6 (27-153)||(30404353-30404481)
chr6 (26-153)||(22482443-22482573)
chr6 (26-153)||(17093579-17093712)
chr6 (18-153)||(13290812-13290949)
chr6 (18-153)||(13305779-13305916)
chr6 (18-153)||(15404344-15404481)
chr6 (18-153)||(15416131-15416268)
chr6 (18-153)||(22251756-22251893)
chr6 (18-153)||(22926127-22926264)
chr6 (18-153)||(24849791-24849928)
chr6 (18-153)||(24871819-24871956)
chr6 (26-153)||(30977780-30977910)
chr6 (18-147)||(8763233-8763362)
chr6 (18-153)||(12615151-12615288)
chr6 (18-153)||(15431722-15431859)
chr6 (53-153)||(27644152-27644252)
chr6 (18-153)||(3041388-3041526)
chr6 (18-153)||(22253693-22253831)
chr6 (18-147)||(922131-922262)
chr6 (18-153)||(32783364-32783502)
chr6 (18-153)||(17762142-17762279)
chr6 (92-153)||(24374366-24374427)
chr6 (18-153)||(26500594-26500733)
chr6 (18-151)||(21996216-21996349)
chr6 (52-153)||(31185267-31185369)
chr6 (18-153)||(7582920-7583062)
chr6 (18-153)||(18820328-18820469)
chr6 (27-153)||(24297575-24297693)
chr6 (30-93)||(16559687-16559750)
chr6 (26-153)||(17030695-17030824)
chr6 (77-147)||(20422356-20422427)
chr6 (80-150)||(27211155-27211224)
chr6 (80-150)||(27238004-27238073)
chr6 (80-150)||(27309334-27309403)
chr6 (77-150)||(29625999-29626073)
chr6 (77-153)||(4115015-4115090)
chr6 (25-153)||(27180598-27180729)
chr6 (25-153)||(27268510-27268641)
chr6 (80-147)||(20154003-20154069)
chr6 (80-147)||(22178763-22178829)
chr6 (80-150)||(16996037-16996106)
chr6 (26-153)||(16769493-16769610)
chr6 (88-147)||(31539281-31539340)
chr6 (108-150)||(12965998-12966040)
chr6 (18-153)||(16001897-16002028)
chr6 (80-150)||(20178898-20178966)
chr6 (80-150)||(22157025-22157093)
chr6 (18-150)||(26993119-26993243)
chr6 (18-150)||(27027462-27027586)
chr6 (238-279)||(14136588-14136629)
chr6 (238-279)||(14148659-14148700)
chr6 (238-279)||(27294873-27294914)
chr6 (45-146)||(27295081-27295185)
chr6 (109-147)||(6874134-6874172)
chr6 (18-91)||(21786933-21787007)
chr6 (238-279)||(20215040-20215081)
chr6 (238-279)||(22109063-22109104)
chr6 (238-279)||(27282213-27282254)
chr6 (109-153)||(18937724-18937768)
chr6 (123-153)||(16762232-16762262)
chr6 (18-148)||(28158075-28158208)
chr6 (18-148)||(28169116-28169249)
chr6 (238-279)||(3691140-3691181)
chr6 (18-74)||(4115105-4115161)
[»] chr3 (92 HSPs)
chr3 (26-149)||(19372234-19372357)
chr3 (18-152)||(8344159-8344293)
chr3 (26-153)||(17785443-17785570)
chr3 (26-153)||(19086963-19087090)
chr3 (26-153)||(37187072-37187199)
chr3 (26-153)||(15366411-15366540)
chr3 (26-153)||(14143885-14144013)
chr3 (52-153)||(28168202-28168303)
chr3 (18-153)||(18060354-18060489)
chr3 (18-153)||(8281426-8281563)
chr3 (18-153)||(8310236-8310373)
chr3 (18-153)||(34803487-34803623)
chr3 (17-153)||(22394295-22394433)
chr3 (18-153)||(11263206-11263343)
chr3 (27-150)||(19926036-19926161)
chr3 (18-153)||(22379362-22379499)
chr3 (17-153)||(10598352-10598490)
chr3 (18-153)||(4682033-4682170)
chr3 (18-153)||(4692139-4692276)
chr3 (18-153)||(5644928-5645065)
chr3 (18-153)||(5660351-5660488)
chr3 (18-153)||(8107699-8107836)
chr3 (18-153)||(16424371-16424508)
chr3 (41-153)||(4714745-4714857)
chr3 (41-153)||(4729925-4730037)
chr3 (27-153)||(5202719-5202847)
chr3 (41-153)||(6185426-6185538)
chr3 (41-153)||(6210193-6210305)
chr3 (27-153)||(8289057-8289186)
chr3 (17-147)||(26828221-26828354)
chr3 (18-153)||(1735252-1735389)
chr3 (26-153)||(4443181-4443310)
chr3 (26-153)||(35873905-35874034)
chr3 (26-153)||(35888974-35889103)
chr3 (53-153)||(15659711-15659811)
chr3 (41-153)||(18323764-18323876)
chr3 (18-153)||(4881852-4881990)
chr3 (18-153)||(9724215-9724353)
chr3 (18-153)||(16065879-16066019)
chr3 (18-153)||(19702512-19702650)
chr3 (18-153)||(15884541-15884679)
chr3 (18-153)||(32966345-32966484)
chr3 (18-153)||(4803426-4803566)
chr3 (26-153)||(9528166-9528293)
chr3 (41-153)||(18338861-18338973)
chr3 (41-153)||(28010686-28010798)
chr3 (18-153)||(4447274-4447412)
chr3 (18-153)||(4651909-4652051)
chr3 (26-152)||(10411865-10411991)
chr3 (18-153)||(15899720-15899858)
chr3 (53-153)||(14454022-14454123)
chr3 (26-147)||(29898541-29898664)
chr3 (26-147)||(29940501-29940624)
chr3 (26-147)||(29989655-29989778)
chr3 (18-153)||(35568623-35568760)
chr3 (17-153)||(19629934-19630077)
chr3 (26-147)||(18523614-18523739)
chr3 (18-153)||(19447113-19447254)
chr3 (77-153)||(4788589-4788665)
chr3 (77-147)||(10932047-10932118)
chr3 (18-153)||(8229053-8229181)
chr3 (18-153)||(15733026-15733153)
chr3 (18-153)||(15748111-15748238)
chr3 (18-111)||(18044323-18044416)
chr3 (96-153)||(19445372-19445429)
chr3 (18-153)||(17902477-17902605)
chr3 (18-153)||(18000715-18000843)
chr3 (109-153)||(4886680-4886724)
chr3 (77-147)||(11649284-11649355)
chr3 (112-150)||(22120695-22120733)
chr3 (238-279)||(1775053-1775094)
chr3 (238-279)||(4621658-4621699)
chr3 (238-279)||(4632662-4632703)
chr3 (238-279)||(30009419-30009460)
chr3 (238-279)||(31027699-31027740)
chr3 (238-279)||(31038120-31038161)
chr3 (109-147)||(15369443-15369481)
chr3 (109-147)||(15478104-15478142)
chr3 (108-146)||(16616773-16616811)
chr3 (108-146)||(22042346-22042384)
chr3 (238-275)||(25000792-25000829)
chr3 (242-279)||(29140326-29140363)
chr3 (242-279)||(29155131-29155168)
chr3 (18-146)||(16632868-16632997)
chr3 (18-151)||(36133476-36133599)
chr3 (109-147)||(1987863-1987901)
chr3 (109-147)||(9097756-9097794)
chr3 (18-91)||(19273652-19273726)
chr3 (238-276)||(20052316-20052354)
chr3 (238-276)||(20074976-20075014)
chr3 (18-148)||(28357511-28357644)
chr3 (18-91)||(4886594-4886669)
[»] scaffold0748 (1 HSPs)
scaffold0748 (26-153)||(327-454)
[»] chr5 (59 HSPs)
chr5 (18-153)||(23885382-23885518)
chr5 (26-152)||(29884137-29884264)
chr5 (18-153)||(22274764-22274900)
chr5 (26-153)||(24614334-24614463)
chr5 (26-153)||(24710733-24710862)
chr5 (26-153)||(24743729-24743858)
chr5 (26-153)||(24756497-24756626)
chr5 (18-153)||(20582226-20582352)
chr5 (18-153)||(21832257-21832394)
chr5 (18-153)||(23900033-23900159)
chr5 (18-153)||(30467311-30467449)
chr5 (18-153)||(20195918-20196055)
chr5 (18-153)||(30954625-30954762)
chr5 (27-153)||(35873717-35873847)
chr5 (18-153)||(18063925-18064061)
chr5 (18-153)||(27291499-27291637)
chr5 (17-153)||(34499232-34499370)
chr5 (18-153)||(573061-573198)
chr5 (18-151)||(7813832-7813968)
chr5 (18-153)||(11557555-11557692)
chr5 (18-153)||(18081550-18081687)
chr5 (18-153)||(25506487-25506624)
chr5 (18-153)||(3941573-3941712)
chr5 (41-153)||(22990946-22991058)
chr5 (41-153)||(23005943-23006055)
chr5 (18-149)||(16680295-16680429)
chr5 (18-153)||(33785568-33785706)
chr5 (18-153)||(22345251-22345388)
chr5 (18-153)||(30915206-30915347)
chr5 (18-153)||(32451785-32451922)
chr5 (18-153)||(11543496-11543634)
chr5 (18-147)||(19865903-19866033)
chr5 (18-153)||(33770617-33770755)
chr5 (18-153)||(34495748-34495890)
chr5 (18-153)||(22443312-22443451)
chr5 (18-153)||(24610425-24610562)
chr5 (18-153)||(24945231-24945368)
chr5 (18-153)||(25193115-25193252)
chr5 (18-153)||(25208502-25208639)
chr5 (18-153)||(25272658-25272795)
chr5 (41-153)||(23734628-23734740)
chr5 (17-153)||(41299277-41299416)
chr5 (18-153)||(15493781-15493919)
chr5 (26-153)||(22896538-22896670)
chr5 (18-153)||(30927751-30927878)
chr5 (18-147)||(37296920-37297049)
chr5 (18-153)||(37648552-37648680)
chr5 (27-153)||(23724989-23725108)
chr5 (109-153)||(24978183-24978227)
chr5 (109-153)||(27281611-27281655)
chr5 (238-279)||(31584084-31584125)
chr5 (238-279)||(42066146-42066187)
chr5 (109-147)||(21499179-21499217)
chr5 (238-279)||(29893598-29893639)
chr5 (238-275)||(33286168-33286205)
chr5 (238-275)||(33301218-33301255)
chr5 (110-153)||(35398845-35398888)
chr5 (112-150)||(28900556-28900594)
chr5 (112-150)||(28936951-28936989)
[»] chr7 (65 HSPs)
chr7 (26-152)||(6176747-6176874)
chr7 (26-153)||(16034577-16034707)
chr7 (26-153)||(16049353-16049483)
chr7 (18-153)||(13738340-13738477)
chr7 (18-153)||(15920936-15921076)
chr7 (18-153)||(4053030-4053156)
chr7 (18-153)||(14227676-14227813)
chr7 (18-153)||(5166626-5166763)
chr7 (18-153)||(16500929-16501066)
chr7 (18-153)||(16510225-16510362)
chr7 (18-153)||(18427772-18427909)
chr7 (18-148)||(2113390-2113522)
chr7 (27-153)||(5804247-5804375)
chr7 (18-153)||(23006765-23006903)
chr7 (28-153)||(4184032-4184160)
chr7 (18-153)||(14932209-14932346)
chr7 (18-153)||(15355644-15355781)
chr7 (26-153)||(23762753-23762884)
chr7 (18-153)||(35969651-35969788)
chr7 (18-153)||(35991063-35991200)
chr7 (18-153)||(36881392-36881529)
chr7 (18-153)||(39864409-39864546)
chr7 (18-153)||(10923913-10924051)
chr7 (18-153)||(16525340-16525477)
chr7 (18-153)||(18461704-18461841)
chr7 (18-153)||(39203687-39203826)
chr7 (18-153)||(39215058-39215197)
chr7 (18-150)||(10908381-10908516)
chr7 (41-153)||(18135179-18135291)
chr7 (18-153)||(20590353-20590493)
chr7 (24-153)||(7367192-7367311)
chr7 (53-153)||(30306072-30306174)
chr7 (18-153)||(2967181-2967318)
chr7 (18-153)||(11358941-11359078)
chr7 (18-153)||(18590684-18590821)
chr7 (18-153)||(18620864-18621001)
chr7 (29-146)||(4546044-4546163)
chr7 (18-153)||(6224999-6225137)
chr7 (17-153)||(39148573-39148711)
chr7 (18-153)||(11431651-11431788)
chr7 (18-153)||(11416647-11416784)
chr7 (88-153)||(16441921-16441986)
chr7 (88-153)||(16456863-16456928)
chr7 (18-153)||(22834751-22834888)
chr7 (24-152)||(30243740-30243870)
chr7 (44-153)||(2147692-2147793)
chr7 (44-153)||(2162903-2163004)
chr7 (109-153)||(15006824-15006868)
chr7 (109-153)||(23833444-23833488)
chr7 (238-279)||(7233574-7233615)
chr7 (238-279)||(18537349-18537390)
chr7 (238-279)||(18547857-18547898)
chr7 (238-279)||(39352473-39352514)
chr7 (238-279)||(45729184-45729225)
chr7 (238-279)||(45740086-45740127)
chr7 (18-153)||(5243919-5244047)
chr7 (117-153)||(22976120-22976156)
chr7 (18-147)||(34192436-34192556)
chr7 (109-147)||(10841549-10841587)
chr7 (109-147)||(13897349-13897387)
chr7 (18-80)||(15851764-15851826)
chr7 (238-279)||(16160468-16160509)
chr7 (18-148)||(5121376-5121509)
chr7 (18-148)||(5156327-5156460)
chr7 (109-147)||(34198298-34198336)
[»] chr1 (41 HSPs)
chr1 (26-152)||(20323674-20323800)
chr1 (20-151)||(5135352-5135484)
chr1 (18-153)||(21479210-21479347)
chr1 (26-147)||(31449795-31449916)
chr1 (18-153)||(18286828-18286965)
chr1 (52-153)||(16403527-16403629)
chr1 (27-153)||(24652157-24652288)
chr1 (18-151)||(4149607-4149743)
chr1 (18-153)||(18596021-18596158)
chr1 (18-153)||(21083847-21083984)
chr1 (41-153)||(14690762-14690874)
chr1 (41-153)||(14701500-14701612)
chr1 (18-153)||(8885053-8885191)
chr1 (18-153)||(13483380-13483518)
chr1 (18-153)||(26795857-26795994)
chr1 (41-153)||(14693443-14693555)
chr1 (41-153)||(14696125-14696237)
chr1 (41-153)||(14698809-14698921)
chr1 (18-153)||(21503390-21503528)
chr1 (20-113)||(21652610-21652704)
chr1 (18-153)||(21889249-21889388)
chr1 (18-153)||(47665110-47665249)
chr1 (41-147)||(13108503-13108609)
chr1 (18-147)||(16228600-16228730)
chr1 (53-153)||(16199994-16200099)
chr1 (52-147)||(20453029-20453126)
chr1 (52-147)||(20539667-20539764)
chr1 (52-147)||(20545528-20545625)
chr1 (52-147)||(15432044-15432140)
chr1 (53-153)||(16215009-16215114)
chr1 (52-147)||(20468927-20469024)
chr1 (80-151)||(46197207-46197277)
chr1 (238-279)||(28148116-28148157)
chr1 (238-279)||(28158591-28158632)
chr1 (103-147)||(15818460-15818504)
chr1 (109-153)||(24928590-24928634)
chr1 (110-145)||(20331043-20331078)
chr1 (112-150)||(16655003-16655041)
chr1 (18-148)||(37886943-37887076)
chr1 (109-145)||(20345487-20345523)
chr1 (20-106)||(20345516-20345603)
[»] scaffold0043 (1 HSPs)
scaffold0043 (26-153)||(98923-99051)
[»] chr8 (46 HSPs)
chr8 (18-153)||(12482281-12482417)
chr8 (18-153)||(5518674-5518811)
chr8 (18-153)||(553272-553410)
chr8 (18-153)||(18788900-18789038)
chr8 (18-153)||(19652553-19652690)
chr8 (18-153)||(19663208-19663345)
chr8 (18-153)||(14027550-14027688)
chr8 (18-153)||(2129082-2129220)
chr8 (18-153)||(2144252-2144390)
chr8 (18-153)||(16262191-16262330)
chr8 (18-153)||(19908990-19909127)
chr8 (18-153)||(30369384-30369510)
chr8 (18-153)||(14550591-14550729)
chr8 (18-153)||(14571415-14571553)
chr8 (18-153)||(15208084-15208222)
chr8 (18-153)||(21379477-21379619)
chr8 (18-153)||(29034506-29034644)
chr8 (18-153)||(22141113-22141250)
chr8 (36-153)||(33239993-33240113)
chr8 (36-153)||(33250672-33250792)
chr8 (18-153)||(40697942-40698081)
chr8 (53-153)||(14361817-14361917)
chr8 (18-153)||(27600794-27600931)
chr8 (18-153)||(27615846-27615983)
chr8 (18-147)||(28260656-28260788)
chr8 (18-153)||(18798906-18799046)
chr8 (45-153)||(3219353-3219466)
chr8 (18-151)||(19696288-19696424)
chr8 (18-153)||(16256761-16256889)
chr8 (88-147)||(15016011-15016070)
chr8 (18-153)||(15321977-15322104)
chr8 (18-153)||(15502346-15502473)
chr8 (52-153)||(22072917-22073019)
chr8 (108-153)||(21339516-21339561)
chr8 (55-147)||(21963373-21963466)
chr8 (18-153)||(31341896-31342026)
chr8 (108-150)||(28506007-28506049)
chr8 (238-279)||(3715606-3715647)
chr8 (238-279)||(15766994-15767035)
chr8 (238-279)||(15777408-15777449)
chr8 (108-147)||(25744832-25744871)
chr8 (109-151)||(1687479-1687521)
chr8 (238-279)||(9350254-9350295)
chr8 (27-151)||(19664789-19664916)
chr8 (18-80)||(21339586-21339648)
chr8 (242-279)||(9363538-9363575)
[»] scaffold0134 (1 HSPs)
scaffold0134 (52-153)||(21615-21717)
[»] scaffold0093 (2 HSPs)
scaffold0093 (26-139)||(8329-8443)
scaffold0093 (26-114)||(3706-3795)
[»] scaffold0184 (1 HSPs)
scaffold0184 (18-153)||(20466-20602)
[»] scaffold0078 (1 HSPs)
scaffold0078 (18-153)||(52242-52378)
[»] scaffold0225 (1 HSPs)
scaffold0225 (23-153)||(1580-1701)
[»] scaffold0001 (2 HSPs)
scaffold0001 (18-153)||(384197-384334)
scaffold0001 (18-153)||(75128-75268)
[»] scaffold0061 (1 HSPs)
scaffold0061 (17-153)||(34115-34254)
[»] scaffold0017 (1 HSPs)
scaffold0017 (17-153)||(164528-164667)
[»] scaffold0089 (4 HSPs)
scaffold0089 (18-153)||(8022-8160)
scaffold0089 (18-153)||(53975-54113)
scaffold0089 (18-151)||(23001-23137)
scaffold0089 (18-153)||(13798-13926)
[»] scaffold0401 (1 HSPs)
scaffold0401 (45-153)||(14315-14425)
[»] scaffold0609 (1 HSPs)
scaffold0609 (18-153)||(3401-3537)
[»] scaffold0547 (1 HSPs)
scaffold0547 (18-153)||(7519-7656)
[»] scaffold0240 (1 HSPs)
scaffold0240 (18-153)||(22871-23008)
[»] scaffold0186 (1 HSPs)
scaffold0186 (18-153)||(15719-15856)
[»] scaffold0280 (1 HSPs)
scaffold0280 (41-153)||(20034-20146)
[»] scaffold0022 (2 HSPs)
scaffold0022 (17-153)||(156249-156388)
scaffold0022 (18-97)||(170566-170645)
[»] scaffold0954 (1 HSPs)
scaffold0954 (18-153)||(672-798)
[»] scaffold0393 (1 HSPs)
scaffold0393 (18-153)||(4668-4806)
[»] scaffold0018 (1 HSPs)
scaffold0018 (18-141)||(169270-169394)
[»] scaffold0211 (2 HSPs)
scaffold0211 (18-147)||(13238-13368)
scaffold0211 (52-147)||(5605-5702)
[»] scaffold0053 (1 HSPs)
scaffold0053 (18-153)||(38698-38836)
[»] scaffold0130 (1 HSPs)
scaffold0130 (52-153)||(297-399)
[»] scaffold0070 (1 HSPs)
scaffold0070 (27-153)||(50268-50396)
[»] scaffold0355 (2 HSPs)
scaffold0355 (52-153)||(13133-13235)
scaffold0355 (52-153)||(15473-15575)
[»] scaffold0346 (1 HSPs)
scaffold0346 (26-153)||(17621-17750)
[»] scaffold0124 (1 HSPs)
scaffold0124 (18-153)||(27204-27341)
[»] scaffold0253 (1 HSPs)
scaffold0253 (26-148)||(507-633)
[»] scaffold0354 (1 HSPs)
scaffold0354 (18-153)||(14477-14615)
[»] scaffold0131 (1 HSPs)
scaffold0131 (26-153)||(22638-22772)
[»] scaffold0055 (1 HSPs)
scaffold0055 (18-153)||(9527-9654)
[»] scaffold0052 (1 HSPs)
scaffold0052 (18-153)||(74881-75008)
[»] scaffold0021 (3 HSPs)
scaffold0021 (18-153)||(59176-59303)
scaffold0021 (26-150)||(96814-96942)
scaffold0021 (26-150)||(177727-177855)
[»] scaffold1587 (1 HSPs)
scaffold1587 (77-153)||(131-208)
[»] scaffold0014 (1 HSPs)
scaffold0014 (26-153)||(207817-207945)
[»] scaffold0750 (1 HSPs)
scaffold0750 (57-153)||(1463-1561)
[»] scaffold2094 (1 HSPs)
scaffold2094 (18-118)||(985-1090)
[»] scaffold0322 (1 HSPs)
scaffold0322 (26-153)||(15888-16017)
[»] scaffold0174 (1 HSPs)
scaffold0174 (52-147)||(6226-6322)
[»] scaffold0074 (1 HSPs)
scaffold0074 (52-147)||(14107-14203)
[»] scaffold0029 (1 HSPs)
scaffold0029 (18-153)||(7232-7360)
[»] scaffold0027 (1 HSPs)
scaffold0027 (18-153)||(115162-115290)
[»] scaffold0252 (1 HSPs)
scaffold0252 (18-153)||(2625-2754)
[»] scaffold0260 (3 HSPs)
scaffold0260 (109-153)||(13544-13588)
scaffold0260 (109-145)||(7810-7846)
scaffold0260 (20-106)||(7839-7926)
[»] scaffold0109 (2 HSPs)
scaffold0109 (97-153)||(14962-15018)
scaffold0109 (97-153)||(29479-29535)
[»] scaffold0234 (1 HSPs)
scaffold0234 (108-150)||(26970-27012)
[»] scaffold1376 (1 HSPs)
scaffold1376 (108-153)||(7-52)
[»] scaffold0418 (1 HSPs)
scaffold0418 (238-279)||(3901-3942)
[»] scaffold0389 (1 HSPs)
scaffold0389 (18-147)||(16260-16379)
[»] scaffold0643 (1 HSPs)
scaffold0643 (18-106)||(4472-4563)
[»] scaffold0178 (1 HSPs)
scaffold0178 (118-153)||(35118-35153)
[»] scaffold0143 (1 HSPs)
scaffold0143 (109-147)||(20618-20656)
[»] scaffold0127 (1 HSPs)
scaffold0127 (109-147)||(24397-24435)
[»] scaffold0433 (1 HSPs)
scaffold0433 (26-153)||(14135-14252)
[»] scaffold1658 (1 HSPs)
scaffold1658 (18-124)||(183-290)
[»] scaffold0060 (1 HSPs)
scaffold0060 (18-91)||(26874-26948)
[»] scaffold0372 (1 HSPs)
scaffold0372 (238-279)||(14714-14755)
[»] scaffold0099 (1 HSPs)
scaffold0099 (88-153)||(2593-2662)
[»] scaffold0051 (1 HSPs)
scaffold0051 (238-279)||(85901-85942)
[»] scaffold0557 (1 HSPs)
scaffold0557 (18-89)||(10970-11042)


Alignment Details
Target: scaffold0177 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 1314 - 1182
Alignment:
Q  23 ttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc--aaaattgcatctgaatcaggttgagtcatttta 120  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  1314 ttatctctgagtctttcaaacttgtctgcacaaatcattgtcgaatctctgtttaaaatcatttcaaaaaattgcatctgagtcaggttgagtcatttta 1215  T
Q  121 gtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||    
T  1214 gtccctaggggcattttggtcttttcctgtcaa 1182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 15385214 - 15385341
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15385214 tctctgagtctttttaacttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgagtcaggttgagtcattttagtccc 15385313  T
Q  126 taggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||    
T  15385314 taggggcattttggtcttttcctgtcaa 15385341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 4863293 - 4863426
Alignment:
Q  20 tgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcatttt 119  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||    
T  4863293 tgtttatctctgagtcttttaaacttgtctgtacaaatcattgttgaatctctgtttaaagtcatttcaaaattgcatctgagtcagtttgagtcagttt 4863392  T
Q  120 agtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  4863393 agtccctaggggcattttggtcttttcctgtcaa 4863426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 15236051 - 15236179
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||||||| |||||||| ||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||||||    
T  15236051 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaactatttcaaaaattgcatctgagtcaggttgagtcattttagtcc 15236150  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||| ||||    
T  15236151 ctaggggcattttggtcttttcctatcaa 15236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 5202416 - 5202279
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  5202416 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 5202317  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  5202316 gtttagtccctaggggcattttggtcttttcctgtcaa 5202279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 14661215 - 14661078
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  14661215 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcagtttgagtca 14661116  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  14661115 gtttagtccctaggggcattttggtcttttcctgtcaa 14661078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 24584339 - 24584216
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| |||||||| ||||||||    
T  24584339 ctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaagtcatttcaaaaattgcatctgagtcagtttgagtcagtttagtcc 24584240  T
Q  125 ctaggggcattttggtcttttcct 148  Q
    ||||||||||||||||||||||||    
T  24584239 ctaggggcattttggtcttttcct 24584216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 24599166 - 24599043
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| |||||||| ||||||||    
T  24599166 ctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtcc 24599067  T
Q  125 ctaggggcattttggtcttttcct 148  Q
    ||||||||||||||||||||||||    
T  24599066 ctaggggcattttggtcttttcct 24599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 22729404 - 22729267
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  22729404 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 22729305  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  22729304 gtttagtccctaggggcattttggtcttttcctgtcaa 22729267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 15217306 - 15217429
Alignment:
Q  30 tgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctag 128  Q
    |||||||||  || ||||||| |||||||| ||||||||||||||||||||  ||||||||| |||||||||| | |||||||||||||||||||||||     
T  15217306 tgagtctttttaaattgtctgtacaaatcactgttgaatctctgtttaaaactatttcaaaaattgcatctgagttaggttgagtcattttagtcccta- 15217404  T
Q  129 gggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||    
T  15217405 gggcattttggtcttttcctgtcaa 15217429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 1640842 - 1640980
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat--catttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| |||||||||   |||||||||| |||||||||| |||| ||| |||    
T  1640842 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaaaccatttcaaaaattgcatctgagtcagtttgggtc 1640941  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  1640942 agtttagtccctaggggcattttggtcttttcctgtcaa 1640980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 14654751 - 14654888
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| | ||||||    
T  14654751 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagttggagtca 14654850  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  14654851 gtttagtccctaggggcattttggtcttttcctgtcaa 14654888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 34269610 - 34269747
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaa-attgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| |||||||||| ||||||| ||| |||| |||  |||    
T  34269610 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaagattgcatttgagtcagtttggatca 34269709  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  34269710 gtttagtccctaggggcattttggtcttttcctgtcaa 34269747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 5315000 - 5315135
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcatt 117  Q
    |||||||  ||||||||||||  || ||||||| ||||||||| ||| | ||| |||| |||||||||||||||| |||||||| |||  ||| |||| |    
T  5315000 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcatcgttaattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagt 5315099  T
Q  118 ttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  5315100 ttagtccctaggggcattttggtcttttcctgtcaa 5315135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 19642049 - 19641912
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| ||||||  | ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  19642049 tgtgtttgcctctgagtcttttcaacctgtctgtgcgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 19641950  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  19641949 gtttagtccctaggggcattttggtcttttcctgtcaa 19641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 13438772 - 13438902
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||| ||||| |||||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| |||| ||| |||| | ||||    
T  13438772 tctctgagcctttctaacttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgggtcagtatagt 13438871  T
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    |||| ||||||||||||||||| ||||||||    
T  13438872 ccctgggggcattttggtctttacctgtcaa 13438902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 18467393 - 18467263
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  ||||||| |  ||||||||||||||| ||| |||| |||| ||||||||||| |||||||||| |||| ||||||||    
T  18467393 tgtgtttgtctctgagtcttttcaacttgtttt-acaaatcattgttgagtctttgttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 18467295  T
Q  116 ttttagtccctaggggcattttggtcttttcc 147  Q
     |||||||||||||||||||||||||||||||    
T  18467294 gtttagtccctaggggcattttggtcttttcc 18467263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 14673195 - 14673332
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||||||||||||||| || ||||||||| | ||||||||| |||||||||| | || | || |||    
T  14673195 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgaaactttgtttaaaaattatttcaaaaattgcatctgagttagttggattca 14673294  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  14673295 gtttagtccctaggggcattttggtcttttcctgtcaa 14673332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 26141377 - 26141238
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat---catttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| |||||||||    |||||||||| |||||||||| |||  ||||||    
T  26141377 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaagaacatttcaaaaattgcatctgagtcaatttgagt 26141278  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||  ||||||||||||||||||||||||    
T  26141277 cagtttagtccctaaaggcattttggtcttttcctgtcaa 26141238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 26463638 - 26463510
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||   ||||||||||  |||||||||||||| ||| ||||||||| || |||||||| |||||| ||| |||| ||| |||| ||||||||    
T  26463638 ctctgagtcttgtcaacttgtctgtgcaaatcattgttgagtctttgtttaaaaatcgtttcaaaaattgcatttgagtcagtttgggtcagtttagtcc 26463539  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  26463538 ctaggggcattttggtcttttcctgtcaa 26463510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 26409311 - 26409241
Alignment:
Q  77 aaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  26409311 aaaatcatttcaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcc 26409241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 1668661 - 1668804
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt------aaaatcatttcaaaa--ttgcatctgaatcaggtt 109  Q
    ||||||| |||||||||||||  ||| |||||| |||||||| |||||| ||| |||||      |||| ||||||||||  | |||||||| |||| ||    
T  1668661 tgtgtttgtctctgagtcttttcaacctgtctgtacaaatcactgttgagtctttgttttaaaaaaaaaccatttcaaaaaatcgcatctgagtcagttt 1668760  T
Q  110 gagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  1668761 gagtcagtttagtccctaggggcattttggtcttttcctgtcaa 1668804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 16276392 - 16276523
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    ||||||| |||||||||||||  ||||||| |  ||||||||||||||| ||| |||| ||||  ||||||||||| |||||||||| |||  |||||||    
T  16276392 tgtgtttgtctctgagtcttttcaacttgtttt-acaaatcattgttgagtctttgttaaaaaaatcatttcaaaaattgcatctgagtcaatttgagtc 16276490  T
Q  115 attttagtccctaggggcattttggtcttttcc 147  Q
    | |||||||||||||||||||||||||||||||    
T  16276491 agtttagtccctaggggcattttggtcttttcc 16276523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 40466408 - 40466271
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  |||||||||| |  ||||||| || ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| | || ||| ||||    
T  40466408 tgtgtttgcctctgagtctattcaacttgtatgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtaagtttgggtca 40466309  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||| ||||||||||||||||||||||    
T  40466308 gtttagtccctagggtcattttggtcttttcctgtcaa 40466271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 18030099 - 18029971
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaatt-gcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  |||| ||||| ||||||||||||||| ||| ||||||||| ||||||||||| | |||| |||  ||| ||  |||| ||||||||    
T  18030099 ctctgagtcttttcaactggtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaatcgcatttgaggcagtttaggtcagtttagtcc 18030000  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  18029999 ctaggggcattttggtcttttcctgtcaa 18029971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 15198182 - 15198049
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| |||||||||   ||||||||||| |||||||||| | || ||| ||    
T  15198182 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaaatcatttcaaaaattgcatctgagttagtttgggt 15198083  T
Q  114 cattttagtccctaggggcattttggtcttttcc 147  Q
    || ||||||||| |||||||||||||||||||||    
T  15198082 cagtttagtccccaggggcattttggtcttttcc 15198049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 20755166 - 20755264
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||||||| ||| |||| ||||  ||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  20755166 acaaatcattgttgagtctttgttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcc 20755264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 46658053 - 46658185
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtt---taaaatcatttc-aaaattgcatctgaatcaggttgagt 113  Q
    ||||||| |||||||||||||  ||||||| |  ||||||||||||||| ||| | ||    ||||||||||| |||||||||||||| |||| ||||||    
T  46658053 tgtgtttgtctctgagtcttttcaacttgt-tttacaaatcattgttgagtcttttttaaaaaaaatcatttcaaaaattgcatctgagtcagtttgagt 46658151  T
Q  114 cattttagtccctaggggcattttggtcttttcc 147  Q
    || |||||||||||||||||||||||||||||||    
T  46658152 cagtttagtccctaggggcattttggtcttttcc 46658185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 9250250 - 9250123
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| ||||||||||| |||||||||| ||||             
T  9250250 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcag--------- 9250160  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  9250159 -tttagtccctaggggcattttggtcttttcctgtcaa 9250123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 12783437 - 12783541
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaat--catttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcct 148  Q
    |||||||| |||||| ||| |||||||||   |||||||||| |||||||| | |||| |||||||| | ||||||||||||||||||||||||||||||    
T  12783437 acaaatcactgttgagtctttgtttaaaaatccatttcaaaaattgcatctaagtcagtttgagtcagtatagtccctaggggcattttggtcttttcct 12783536  T
Q  149 gtcaa 153  Q
    |||||    
T  12783537 gtcaa 12783541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15271352 - 15271216
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcat-ctgaatcaggttgagtca 115  Q
    ||||||| ||||||||||||| | | |||| |  ||||||||||||||| ||| ||||||||| | ||||||||||||  | |||| |||| ||||||||    
T  15271352 tgtgtttgtctctgagtcttttatatttgtttt-acaaatcattgttgagtctttgtttaaaaaccatttcaaaattgttttctgagtcagtttgagtca 15271254  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||| |||||||||| |||||||||||||||||||||    
T  15271253 gtttaatccctaggggtattttggtcttttcctgtcaa 15271216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 17084684 - 17084811
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa---ttgcatctgaatcag-gttgagtcattttag 121  Q
    |||||||||||||  |||||||||| | || |||||||| ||||| ||||||||||||||||||||   |||||||||| ||||  || ||||| |||||    
T  17084684 tctctgagtcttttcaacttgtctgtataagtcattgttaaatctttgtttaaaatcatttcaaaaaagttgcatctgagtcagttttaagtcaatttag 17084783  T
Q  122 tcccta-ggggcattttggtcttttcct 148  Q
    |||||| |||||||||| ||||||||||    
T  17084784 tccctagggggcattttagtcttttcct 17084811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 40560769 - 40560896
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| ||||             
T  40560769 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcag--------- 40560859  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  40560860 -tttagtccctaggggcattttggtcttttcctgtcaa 40560896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Complemental strand, 15378305 - 15378209
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||||||| ||| ||||||||| | ||||||||||||  ||||| |||| ||||||||  |||||||||| ||||||||| |||||||||    
T  15378305 acaaatcattgttgagtctttgtttaaaaaccatttcaaaattgtgtctgagtcagtttgagtcagcttagtccctacgggcattttagtcttttcc 15378209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Complemental strand, 15398240 - 15398144
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||||||| ||| ||||||||| | ||||||||||||  ||||| |||| ||||||||  |||||||||| ||||||||| |||||||||    
T  15398240 acaaatcattgttgagtctttgtttaaaaaccatttcaaaattgtgtctgagtcagtttgagtcagcttagtccctacgggcattttagtcttttcc 15398144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 30276054 - 30276182
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttc-aaaattgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  ||||||| |||||||||||          ||||||    
T  30276054 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatc----------tgagtc 30276143  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||| ||||||||||||||||||||    
T  30276144 agtttagtccctaggggcgttttggtcttttcctgtcaa 30276182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 22113923 - 22113860
Alignment:
Q  90 aattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||| |||| ||| |||| |||||||||||||||||||||||||||||| ||||||    
T  22113923 aattgcatctgagtcagtttgggtcagtttagtccctaggggcattttggtcttttcatgtcaa 22113860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 34196302 - 34196173
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa--ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  || ||||||| |||||||||| |||| ||| |||||||||  |||||||||||  |||||||||| ||||           
T  34196302 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattattgagtctttgtttaaaaaatcatttcaaaaaattgcatctgagtcag------- 34196210  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
       |||||||||||||||||||||||||||||||||||||    
T  34196209 ---tttagtccctaggggcattttggtcttttcctgtcaa 34196173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 6559488 - 6559412
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttcaaaa 91  Q
    ||||| || |||||||||||||  |||||||||| ||||||||||||||||||| |||||  |||||||||||||||    
T  6559488 atgtgattgtctctgagtctttttaacttgtctgtacaaatcattgttgaatctttgtttaaaaaatcatttcaaaa 6559412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 1893676 - 1893720
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  1893676 tgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 1893720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 15301585 - 15301541
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  15301585 tgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 15301541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 17007281 - 17007408
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| || |||||| ||||||||||| |||||||||| ||||             
T  17007281 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgcttaaaaatcatttcaaaaattgcatctgagtcag--------- 17007371  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||| |||||||||||||||||||||||||||||||    
T  17007372 -tttagcccctaggggcattttggtcttttcctgtcaa 17007408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 5492663 - 5492704
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  5492663 tcccaaaattgcattttttgtccaaacagtttttaatttcat 5492704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 11925674 - 11925715
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  11925674 tcccaaaattgcattttttgtccaaacagtttttaatttcat 11925715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 1908477 - 1908521
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  1908477 tgagtcagtttagtccctaggggcattttggtcttttcttgtcaa 1908521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 15402129 - 15402061
Alignment:
Q  77 aaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtctttt 145  Q
    |||| |||||||||||||  ||||| |||| ||||||||  |||||||||||||||||||| |||||||    
T  15402129 aaaaccatttcaaaattgtgtctgagtcagtttgagtcagcttagtccctaggggcattttagtctttt 15402061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 16247245 - 16247115
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttc--aaaattgcatctgaatcaggttgag 112  Q
    ||||||| |||||||||||||  ||| |||||| |||||||| |||||| ||| |||||||||    ||||||  |||||||||||          ||||    
T  16247245 tgtgtttgtctctgagtcttttcaacctgtctgtacaaatcactgttgagtctttgtttaaaaaacccatttcaaaaaattgcatc----------tgag 16247156  T
Q  113 tcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||| |||||||||||||| ||||||||||||||||||||||    
T  16247155 tcagtttagtccctagggacattttggtcttttcctgtcaa 16247115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 17021327 - 17021371
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||    
T  17021327 tgagtcagtttagcccctaggggcattttggtcttttcctgtcaa 17021371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 151
Target Start/End: Complemental strand, 14241568 - 14241530
Alignment:
Q  113 tcattttagtccctaggggcattttggtcttttcctgtc 151  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  14241568 tcattttagtccctgggggcattttggtcttttcctgtc 14241530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 20306557 - 20306648
Alignment:
Q  53 caaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtca 152  Q
    |||||||||||| ||||||| ||||||||||| |||||||| ||| ||| ||||         |||  |||||||||||||||||||||||||||| |||    
T  20306557 caaatcattgttaaatctctttttaaaatcatctcaaaattacatttgagtcag---------tttgggtccctaggggcattttggtcttttcctatca 20306647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 34846160 - 34846234
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaaaa 91  Q
    |||||||  ||||||| ||||  || ||||||| ||||||||||||||| ||| ||||| |||||||||||||||    
T  34846160 tgtgtttgcctctgagccttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaa 34846234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 15370654 - 15370574
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtca-ttttagtccctaggggc 132  Q
    ||||||||||||||| ||| ||||||||| | |||||||||||  ||||| |||| |||||||| | |||||||||| ||||    
T  15370654 acaaatcattgttgagtctttgtttaaaa-cctttcaaaattgtgtctgagtcagtttgagtcagtcttagtccctacgggc 15370574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 21534207 - 21534166
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| |||||| | |||||||||||||    
T  21534207 tcccaaaattgcattttttgtccaaataatttttaatttcat 21534166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 29442053 - 29441926
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29442053 tctctgagtctttttaacttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgagtcaggttgagtcattttagtccc 29441954  T
Q  126 taggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||    
T  29441953 taggggcattttggtcttttcctgtcaa 29441926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 10117780 - 10117654
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10117780 tctctgagtcttttaa-cttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgagtcaggttgagtcattttagtccc 10117682  T
Q  126 taggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||    
T  10117681 taggggcattttggtcttttcctgtcaa 10117654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 17257971 - 17258098
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    |||||||||| ||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17257971 tctctgagtccttttaacttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgagtcaggttgagtcattttagtccc 17258070  T
Q  126 taggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||    
T  17258071 caggggcattttggtcttttcctgtcaa 17258098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 5393639 - 5393503
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||| |||||||||||||  |||||||||  ||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||| ||| ||||     
T  5393639 tgtgtttgtctctgagtcttttcaacttgtctatacaaatcattgttgaatctctttttaaaatcatttcaaaaattgcatttgagtcagtttgggtcag 5393540  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||| |||||||||||||||||||||||    
T  5393539 tttagtccctaggagcattttggtcttttcctgtcaa 5393503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 21695331 - 21695203
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||| ||||||||    
T  21695331 tctctgagtctttttaacttgtctgtacaaatcattgttgaatctctgtctaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtcc 21695232  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| ||||| ||||||| |||||||    
T  21695231 ctaggggaatttttgtctttttctgtcaa 21695203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 21710061 - 21709933
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||| ||||||||    
T  21710061 tctctgagtctttttaacttgtctgtacaaatcattgttgaatctctgtctaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtcc 21709962  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| ||||| ||||||| |||||||    
T  21709961 ctaggggaatttttgtctttttctgtcaa 21709933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 18083565 - 18083702
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||| |||||||||||||  ||||||| |  ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| ||||||||||||    
T  18083565 atgtgtttgtctctgagtcttttcaacttgtttt-acaaatcattgttgagtctttgtttaaaaaccatttcaaaaattgcatctgagtcaggttgagtc 18083663  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18083664 attttagtccctaggggcattttggtcttttcctgtcaa 18083702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 19799345 - 19799464
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  ||||||| | | ||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||||||    
T  19799345 tctctgagtctttttaacttgttttc-caaatcattgttgaatctctgtttaaaactatttcaaaaattgcatctgagtcaggttgagtcattttagtcc 19799443  T
Q  125 ctaggggcattttggtctttt 145  Q
    |||||||||||||||||||||    
T  19799444 ctaggggcattttggtctttt 19799464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 17630158 - 17630295
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||||||||    
T  17630158 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagtttgagtca 17630257  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  17630258 gtttagtccctaggggcattttggtcttttcctgtcaa 17630295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 27685652 - 27685788
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  27685652 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 27685751  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtca 152  Q
     ||||||||||||||||||||||||||||||||||||    
T  27685752 gtttagtccctaggggcattttggtcttttcctgtca 27685788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15715837 - 15715700
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaattgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||||||  ||||||||||||||||||||| |||  ||| ||||    
T  15715837 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaattgcatctgagtcaatttgggtca 15715738  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15715737 gtttagtccctaggggcattttggtcttttcctgtcaa 15715700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 20846120 - 20846257
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||| ||||||||||||  ||||| |||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  20846120 tgtgtttacctctgagtcttttcaacttatctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 20846219  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||||||| |||||||||||||||||||||||    
T  20846220 gtttagtccctaggagcattttggtcttttcctgtcaa 20846257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 27426434 - 27426297
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| |||  |||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  27426434 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtcttcgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 27426335  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  27426334 gtttagtccctaggggcattttggtcttttcctgtcaa 27426297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 27441476 - 27441339
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| |||  |||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  27441476 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtcttcgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 27441377  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  27441376 gtttagtccctaggggcattttggtcttttcctgtcaa 27441339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 26622798 - 26622660
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  | |||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| | || |||||||    
T  26622798 tgtgtttgcctctgagtctttttagcttgtctgtacaaatcactgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagttagtttgagtc 26622699  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  26622698 agtttagtccctaggggcattttggtcttttcctgtcaa 26622660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 28875302 - 28875440
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||| ||||  || ||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| ||||  ||||||    
T  28875302 tgtgtttgcctctgagccttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtctgagtc 28875401  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  28875402 agtttagtccctaggggcattttggtcttttcctgtcaa 28875440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 28890512 - 28890650
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||| ||||  || ||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| ||||  ||||||    
T  28890512 tgtgtttgcctctgagccttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtctgagtc 28890611  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  28890612 agtttagtccctaggggcattttggtcttttcctgtcaa 28890650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 39755161 - 39755299
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||| ||||  || ||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  39755161 tgtgtttgcctctgagccttttcaatttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtc 39755260  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  39755261 agtttagtccctaggggcattttggtcttttcctgtcaa 39755299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 40792784 - 40792922
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| |||||||||  ||||||||||| || ||||||| |||| ||| |||    
T  40792784 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattacatctgagtcagtttgggtc 40792883  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  40792884 agtttagtccctaggggcattttggtcttttcctgtcaa 40792922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 13062804 - 13062941
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||| ||||| ||||||||||||||| ||| ||||||||| |||||| |||| |||| | ||| |||| ||||||||    
T  13062804 tgtgtttgcctctgagtcttttcaactggtctgtacaaatcattgttgagtctttgtttaaaaatcattttaaaaattgcgtttgagtcagtttgagtca 13062903  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  13062904 gtttagtccctaggggcattttggtcttttcctgtcaa 13062941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 26268170 - 26268033
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaatt-gcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || |||||||||||| ||| ||||||||| ||||||||||| | ||||| || |||| ||||||||    
T  26268170 tgtgtttgcctctgagtcttttcaacctgtctgtacgaatcattgttgagtctttgtttaaaaatcatttcaaaaatcgcatccgagtcagtttgagtca 26268071  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  26268070 gtttagtccctaggggcattttggtcttttcctgtcaa 26268033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 32238954 - 32238817
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  32238954 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 32238855  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||||||||| |||||||||||||||||||||    
T  32238854 gtttagtccctaggggtattttggtcttttcctgtcaa 32238817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 23119123 - 23119235
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||| | ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  23119123 aacttgtctgtacaaatcatcgttaattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 23119222  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  23119223 cttttcctgtcaa 23119235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 28273189 - 28273327
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||| ||||  ||||||||||| ||| |||||| |||| |||||||    
T  28273189 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgttaaaaaaatcatttcaaaaattgtatctgagtcagtttgagtc 28273288  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | ||||||||||||||||| |||||||||||||||||||    
T  28273289 agtttagtccctaggggcactttggtcttttcctgtcaa 28273327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 27398427 - 27398562
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||| |||||||||||||   |||||| |  ||||||||||||||| ||| ||||||||| | ||||||||||||| ||||| || |  |||||||     
T  27398427 tgtgtttgtctctgagtcttttcgacttgtttt-acaaatcattgttgagtctttgtttaaaaaccatttcaaaattgcgtctgagtctgtctgagtcag 27398525  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||| |||||||||||||||    
T  27398526 tttagtccctaggggcattttagtcttttcctgtcaa 27398562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 37872735 - 37872607
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaatt-gcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  |||| ||||| ||||||||||||||| ||| ||||||||| ||||||||||| | |||| |||  ||| ||  |||| ||||||||    
T  37872735 ctctgagtcttttcaactggtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaatcgcatttgaggcagtttaggtcagtttagtcc 37872636  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  37872635 ctaggggcattttggtcttttcctgtcaa 37872607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 19448547 - 19448416
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    ||||||| |||||||||||||  || |||| |  ||||||||||||||| ||| |||| ||||  ||||||||||| |||||||||| |||| |||||||    
T  19448547 tgtgtttgtctctgagtcttttcaatttgtttt-acaaatcattgttgagtctttgttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 19448449  T
Q  115 attttagtccctaggggcattttggtcttttcc 147  Q
    | ||||||||||||||||| |||||||||||||    
T  19448448 agtttagtccctaggggcaatttggtcttttcc 19448416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 19463357 - 19463226
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    ||||||| |||||||||||||  || |||| |  ||||||||||||||| ||| |||| ||||  ||||||||||| |||||||||| |||| |||||||    
T  19463357 tgtgtttgtctctgagtcttttcaatttgtttt-acaaatcattgttgagtctttgttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 19463259  T
Q  115 attttagtccctaggggcattttggtcttttcc 147  Q
    | ||||||||||||||||| |||||||||||||    
T  19463258 agtttagtccctaggggcaatttggtcttttcc 19463226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 40196398 - 40196321
Alignment:
Q  77 aaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||| |||| ||||| |||  | |||||| |||||||||||||||||||||||||||||||||||||    
T  40196398 aaaatcatttcaaaaattgcctctgagtcaattcgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 40196321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 12648695 - 12648823
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||||||  ||||||||||| |||||||||| ||||            
T  12648695 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcag-------- 12648786  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      |||||||||||||||||||||||||||||||||||||    
T  12648787 --tttagtccctaggggcattttggtcttttcctgtcaa 12648823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Complemental strand, 19562013 - 19561917
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||| ||||| ||| ||||||||| | ||||||||||||  ||||| |||| ||||||||  |||||||||||||||||||| |||||||||    
T  19562013 acaaatcatcgttgagtctttgtttaaaaaccatttcaaaattgtgtctgagtcagtttgagtcagcttagtccctaggggcattttagtcttttcc 19561917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 34308832 - 34308704
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| ||||            
T  34308832 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcag-------- 34308741  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      |||||||||||||||| ||||||||||||||||||||    
T  34308740 --tttagtccctaggggcgttttggtcttttcctgtcaa 34308704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 24042967 - 24043094
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||||||| || || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| ||||             
T  24042967 tgtgtttgcctctgagtcttttcaacttgtatgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcag--------- 24043057  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  24043058 -tttagtccctaggggcattttggtcttttcctgtcaa 24043094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 28271862 - 28271733
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||||||   ||||||||||| |||||||||| ||||           
T  28271862 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaaatcatttcaaaaattgcatctgagtcag------- 28271770  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
       |||||||||||||||||||||||||||||||||||||    
T  28271769 ---tttagtccctaggggcattttggtcttttcctgtcaa 28271733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 4729891 - 4729771
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    ||||||||||||  |||||||||| || ||| |||||||| ||| |||||||||   ||||||||||| |||||||||| ||||          ||||||    
T  4729891 ctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaaatcatttcaaaaattgcatctgagtcag----------tttagt 4729802  T
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||    
T  4729801 ccctaggggcattttggtcttttcctgtcaa 4729771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 34266015 - 34265887
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| ||||| |||  ||||||||||| |||||||||| ||||            
T  34266015 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttcaaaagtcatttcaaaaattgcatctgagtcag-------- 34265924  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      |||||||||||||||| ||||||||||||||||||||    
T  34265923 --tttagtccctaggggcgttttggtcttttcctgtcaa 34265887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 27387356 - 27387501
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatc----------ag 106  Q
    ||||||| |||||||||||||   |||||| |  ||||||||||||||| ||| ||||||||| | ||||||||||||||||||| ||          ||    
T  27387356 tgtgtttgtctctgagtcttttcgacttgtttt-acaaatcattgttgagtctttgtttaaaaaccatttcaaaattgcatctgagtctgtctgagtcag 27387454  T
Q  107 gttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||| ||| ||||||||||||||||||||| |||||||||||||||    
T  27387455 tttgaatcagtttagtccctaggggcattttagtcttttcctgtcaa 27387501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 19465691 - 19465729
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  19465691 tgagtcagtttagtccctaggggcattttggtcttttcc 19465729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 13820731 - 13820694
Alignment:
Q  242 aaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  13820731 aaaattgcattttttgtccaaacagtttttaatttcat 13820694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 12663690 - 12663781
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttc-aaaattgcatctgaatcag 106  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||  ||||||||||| |||||||||||||| ||||    
T  12663690 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcag 12663781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 8704750 - 8704676
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaaaa 91  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||| |||||||||||||||    
T  8704750 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaa 8704676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 31865698 - 31865656
Alignment:
Q  238 tcccaaaattgcatttttta-tccaaacagtttttaatttcat 279  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  31865698 tcccaaaattgcatttttttgtccaaacagtttttaatttcat 31865656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 31895889 - 31895847
Alignment:
Q  238 tcccaaaattgcatttttta-tccaaacagtttttaatttcat 279  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  31895889 tcccaaaattgcatttttttgtccaaacagtttttaatttcat 31895847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 32679587 - 32679625
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  32679587 tgagtcagtttagtccttaggggcattttggtcttttcc 32679625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 3e-54; HSPs: 78)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18693293 - 18693428
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcatt 117  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |    
T  18693293 tgtgtttatctctgagtcttttaaacttgtttgtacaaatcattgttgaatctctgtttaaagtcatttcaaaattgcatctggatcagtttgagtcagt 18693392  T
Q  118 ttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  18693393 ttagtccctaggggcattttggtcttttcctgtcaa 18693428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 14852417 - 14852545
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  14852417 tctctgagtctttttaacttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaaattgcatctgagttaggttgagtcattttagtcc 14852516  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||| ||||    
T  14852517 ctaggggcattttggtcttttcctatcaa 14852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 30723166 - 30723038
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaa-tctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  30723166 tctctgagtctttttaacttgtctgtacaaattattgttgaaatctctgtttaaaatcatttcaaaattgcatctgagtcagtttgagtcagtttagtcc 30723067  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  30723066 ctaggggcattttggtcttttcctgtcaa 30723038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 25177347 - 25177475
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||| ||||||||    
T  25177347 tctctgagtctttttaacttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaaattacatctgagtcagtttgagtcagtttagtcc 25177446  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||| |||||||    
T  25177447 ctaggggcattttggtctttttctgtcaa 25177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 26911722 - 26911857
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcatt 117  Q
    |||||||  ||||||||||||  ||  |||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| |||  ||| |||| |    
T  26911722 tgtgtttgcctctgagtcttttcaatctgtctgtacaaatcattgttgaatctctttttaaaatcatttcaaaattgcatttgagtcaatttgggtcagt 26911821  T
Q  118 ttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  26911822 ttagtccctaggggcattttggtcttttcctgtcaa 26911857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 26929009 - 26929144
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcatt 117  Q
    |||||||  ||||||||||||  ||  |||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| |||  ||| |||| |    
T  26929009 tgtgtttgcctctgagtcttttcaatctgtctgtacaaatcattgttgaatctctttttaaaatcatttcaaaattgcatttgagtcaatttgggtcagt 26929108  T
Q  118 ttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  26929109 ttagtccctaggggcattttggtcttttcctgtcaa 26929144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 24311734 - 24311606
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| ||||||||||| |||||||||| |||| |||||||| ||||||||    
T  24311734 ctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcagtttgagtcagtttagtcc 24311635  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  24311634 ctaggggcattttggtcttttcctgtcaa 24311606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 16347706 - 16347568
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  16347706 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtc 16347607  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  16347606 agtttagtccctaggggcattttggtcttttcctgtcaa 16347568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 26982217 - 26982355
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| |||| ||| |||    
T  26982217 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgggtc 26982316  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  26982317 agtttagtccctaggggcattttggtcttttcctgtcaa 26982355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 27033277 - 27033415
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| |||| ||| |||    
T  27033277 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgggtc 27033376  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  27033377 agtttagtccctaggggcattttggtcttttcctgtcaa 27033415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 22941978 - 22941841
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  22941978 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaagtcatttcaaaaattgcatctgagtcagtttgagtca 22941879  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  22941878 gtttagtccctaggggcattttggtcttttcctgtcaa 22941841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 23864422 - 23864285
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  23864422 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaagtcatttcaaaaattgcatctgagtcagtttgagtca 23864323  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  23864322 gtttagtccctaggggcattttggtcttttcctgtcaa 23864285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 28199394 - 28199313
Alignment:
Q  72 tgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28199394 tgtttaaaatcatttcaaaattgcatctgagccaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 28199313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 34473804 - 34473667
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||||||||||||||  || ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  34473804 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagcctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 34473705  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  34473704 gtttagtccctaggggcattttggtcttttcctgtcaa 34473667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 30404481 - 30404353
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| ||||||||||| |||||||||| |||| |||||||| ||||| ||    
T  30404481 ctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcagtttgagtcagtttagccc 30404382  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  30404381 ctaggggcattttggtcttttcctgtcaa 30404353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 22482573 - 22482443
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat--catttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  |||||||||| | ||||||||||| | ||| |||||||||   |||||||||| |||||||||| ||||||||||||||||||||    
T  22482573 tctctgagtctttttaacttgtctgtataaatcattgttaagtctttgtttaaaaaaccatttcaaaaattgcatctgagtcaggttgagtcattttagt 22482474  T
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||| |||||||||||||||||||||    
T  22482473 ccctaggggtattttggtcttttcctgtcaa 22482443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 17093712 - 17093579
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa------tcatttcaaaattgcatctgaatcaggttgagtcatttt 119  Q
    |||||||||||||  |||||||||| |||||||| |||||| ||| |||| ||||      ||||||||||||||| ||||| |||||||||||||||||    
T  17093712 tctctgagtctttttaacttgtctgtacaaatcactgttgagtctttgttaaaaaaaaaaatcatttcaaaattgcgtctgagtcaggttgagtcatttt 17093613  T
Q  120 agtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||| ||||    
T  17093612 agtccctaggggcattttggtcttttcctatcaa 17093579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 13290949 - 13290812
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || |||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||  |||||||    
T  13290949 tgtgtttgcctctgagtcttttcaacttgtctgtacgaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtctgagtca 13290850  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||| ||||||    
T  13290849 gtttagtccctaggggcattttggtcttttcttgtcaa 13290812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 13305916 - 13305779
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || |||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||  | |||||    
T  13305916 tgtgtttgcctctgagtcttttcaacttgtctgtacgaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtcttagtca 13305817  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  13305816 gtttagtccctaggggcattttggtcttttcctgtcaa 13305779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15404481 - 15404344
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||| ||||    
T  15404481 tgtgtttgcctctgagtcttttcaacctgtctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagtttgggtca 15404382  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15404381 gtttagtccctaggggcattttggtcttttcctgtcaa 15404344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15416268 - 15416131
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||| ||||    
T  15416268 tgtgtttgcctctgagtcttttcaacctgtctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagtttgggtca 15416169  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15416168 gtttagtccctaggggcattttggtcttttcctgtcaa 15416131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 22251893 - 22251756
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| ||  ||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  22251893 tgtgtttgcctctgagtcttttcaacctgtctgtacggatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 22251794  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  22251793 gtttagtccctaggggcattttggtcttttcctgtcaa 22251756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 22926264 - 22926127
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| ||||||||||| || ||||||| |||| ||||||||    
T  22926264 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaagtcatttcaaaaatttcatctgagtcagtttgagtca 22926165  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  22926164 gtttagtccctaggggcattttggtcttttcctgtcaa 22926127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 24849791 - 24849928
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||  |||||||    
T  24849791 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtctgagtca 24849890  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||| |||||||||||||||||||||||||||    
T  24849891 gtttagtccccaggggcattttggtcttttcctgtcaa 24849928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 24871819 - 24871956
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||  |||||||    
T  24871819 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtctgagtca 24871918  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||| |||||||||||||||||||||||||||    
T  24871919 gtttagtccccaggggcattttggtcttttcctgtcaa 24871956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 30977910 - 30977780
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa--ttgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  || |||||||  |||| ||||||||||||| ||||||||| |||||||||||  |||||||||| |||| ||| |||| ||||||    
T  30977910 tctctgagtcttttcaatttgtctgtgcaaaccattgttgaatctttgtttaaaaatcatttcaaaaaattgcatctgagtcagtttgggtcagtttagt 30977811  T
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||    
T  30977810 ccctaggggcattttggtcttttcctgtcaa 30977780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 8763233 - 8763362
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcat 116  Q
    ||||||| |||||||||||||  ||||||| |  ||||||||||||||| ||| |||| ||||||||||||||| |||||||||| |||| ||||||||     
T  8763233 tgtgtttgtctctgagtcttttcaacttgtttt-acaaatcattgttgagtctttgttaaaaatcatttcaaaaattgcatctgagtcagtttgagtcag 8763331  T
Q  117 tttagtccctaggggcattttggtcttttcc 147  Q
    |||| ||||||||||||||||||||||||||    
T  8763332 tttaatccctaggggcattttggtcttttcc 8763362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 12615151 - 12615288
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || |||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||| ||||    
T  12615151 tgtgtttgcctctgagtcttttcaacctgtctgtacgaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagtttgggtca 12615250  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  12615251 gtttagtccctaggggcattttggtcttttcctgtcaa 12615288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15431859 - 15431722
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || |||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||| ||||    
T  15431859 tgtgtttgcctctgagtcttttcaacctgtctgtacgaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagtttgggtca 15431760  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15431759 gtttagtccctaggggcattttggtcttttcctgtcaa 15431722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 27644152 - 27644252
Alignment:
Q  53 caaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtca 152  Q
    |||||||||||| ||||||| ||||||||||| |||||||| ||| ||| |||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  27644152 caaatcattgttaaatctctttttaaaatcatctcaaaattacatttgagtcagtttgggtcagtttagtccctaggggcattttggtcttttcctgtca 27644251  T
Q  153 a 153  Q
    |    
T  27644252 a 27644252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 3041388 - 3041526
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||| | |||||||| |||||| ||| || ||||||  ||||||||||| |||||||||| |||  |||||||    
T  3041388 tgtgtttgcctctgagtcttttcaacttgtcggtacaaatcactgttgagtctttgattaaaaagtcatttcaaaaattgcatctgagtcaatttgagtc 3041487  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  3041488 agtttagtccctaggggcattttggtcttttcctgtcaa 3041526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 22253693 - 22253831
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat--catttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    ||||||| |||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||   |||||||||| |||||||||| ||||  ||| ||    
T  22253693 tgtgtttgtctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaaaccatttcaaaaattgcatctgagtcagtctgaatc 22253792  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | ||||||||| |||||||||||||||||||||||||||    
T  22253793 agtttagtcccgaggggcattttggtcttttcctgtcaa 22253831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 922131 - 922262
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    ||||||| |||||||||||||  ||||||| |  ||||||||||||||| ||| |||| ||||  ||||||||||| |||||||||| |||| |||||||    
T  922131 tgtgtttgtctctgagtcttttcaacttgtttt-acaaatcattgttgagtctttgttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 922229  T
Q  115 attttagtccctaggggcattttggtcttttcc 147  Q
    | |||||||||||||||||||||||||||||||    
T  922230 agtttagtccctaggggcattttggtcttttcc 922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 32783502 - 32783364
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  ||| |||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||  | |||||    
T  32783502 tgtgtttgcctctgagtcttttcaacgtgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcaattcgagtc 32783403  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||| ||||||||||||||||||||||||||||    
T  32783402 agtttagtccttaggggcattttggtcttttcctgtcaa 32783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 17762279 - 17762142
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaa-aatcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||| ||||| ||||||||| ||||| ||| ||||||| ||||||||||||| |||||| |||  ||| ||  ||||    
T  17762279 tgtgtttgcctctgagtcttttcaactggtctgtacaaatcatcgttgagtctttgtttaagaatcatttcaaaaattgcatttgaggcagtttaggtca 17762180  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  17762179 gtttagtccctaggggcattttggtcttttcctgtcaa 17762142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 24374366 - 24374427
Alignment:
Q  92 ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24374366 ttgcatctgagtcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 24374427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 26500594 - 26500733
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| |||||||||   ||||||||||| |||||||||| | || ||| ||    
T  26500594 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaaatcatttcaaaaattgcatctgagttagtttgggt 26500693  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || ||||||| || ||||||||||||||||||||||||||    
T  26500694 cagtttagtctctgggggcattttggtcttttcctgtcaa 26500733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 21996349 - 21996216
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||| |||||||||||||  ||||||| |  |||||||| |||||| ||| ||||||||| | ||||||||||||| ||||| || |  |||||||     
T  21996349 tgtgtttgtctctgagtcttttcaacttgtttt-acaaatcactgttgagtctttgtttaaaaaccatttcaaaattgcgtctgagtctgtctgagtcag 21996251  T
Q  117 tttagtccctaggggcattttggtcttttcctgtc 151  Q
    ||||||||||||||||||||| |||||||||||||    
T  21996250 tttagtccctaggggcattttagtcttttcctgtc 21996216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 31185267 - 31185369
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||||||||||| || ||| |||| |||| ||||||| ||||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||    
T  31185267 acaaatcattgtggagtctttgttcaaaagtcatttcgaaattgcatctgagtcaatttgagtcagtttagtccctaggggcatttttgtcttttcctgt 31185366  T
Q  151 caa 153  Q
    |||    
T  31185367 caa 31185369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 7582920 - 7583062
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt------aaaatcatttc--aaaattgcatctgaatcaggtt 109  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||      |||||||||||  |||||||||||||| | || ||    
T  7582920 tgtgtttgcctctgagtctttttaacttgtctgtacaaatcactgttgagtctttgttttaaaaaaaaatcatttcgaaaaattgcatctgagttagttt 7583019  T
Q  110 gagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||| ||||||||| |||||||||||||||||||||||||||    
T  7583020 gagtcagtttagtccc-aggggcattttggtcttttcctgtcaa 7583062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 18820469 - 18820328
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-----tcatttcaaaa-ttgcatctgaatcaggttga 111  Q
    |||||||  ||||||||||||  |||||||||| ||||| ||||||| | ||| |||||||||     ||||||||||| |||||||||| |||| |||     
T  18820469 tgtgtttgcctctgagtcttttcaacttgtctgtacaaaccattgttaagtctttgtttaaaaaaaaatcatttcaaaaattgcatctgagtcagtttgg 18820370  T
Q  112 gtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||| ||||||||| |||||||||||||||||||| ||||||    
T  18820369 gtcagtttagtccccaggggcattttggtcttttcttgtcaa 18820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 24297693 - 24297575
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| ||||||||||| |||||||||| ||||          ||||||||    
T  24297693 ctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcag----------tttagtcc 24297604  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  24297603 ctaggggcattttggtcttttcctgtcaa 24297575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 16559687 - 16559750
Alignment:
Q  30 tgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaatt 93  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16559687 tgagtctttttaaattgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaatt 16559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 17030824 - 17030695
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaat-tgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  ||||||| |  ||||||||||||||| ||  |||| ||||  |||||||||||  ||||||||| |||  |||||||| ||||||    
T  17030824 tctctgagtcttttcaacttgtttt-acaaatcattgttgagtccttgttaaaaaaatcatttcaaaaagtgcatctgagtcaatttgagtcagtttagt 17030726  T
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||| |||||||||||    
T  17030725 ccctaggggcattttggtcatttcctgtcaa 17030695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 20422356 - 20422427
Alignment:
Q  77 aaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||||||| |||||| ||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  20422356 aaaatcatttcaaaaattgcatatgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcc 20422427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 27211155 - 27211224
Alignment:
Q  80 atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||||| |||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||    
T  27211155 atcatttcaaa-ttgcatctgagtcagcttaggtcattttagtccctaggggcattttggtcttttcctgt 27211224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 27238073 - 27238004
Alignment:
Q  80 atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||||| |||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||    
T  27238073 atcatttcaaa-ttgcatctgagtcagcttaggtcattttagtccctaggggcattttggtcttttcctgt 27238004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 27309403 - 27309334
Alignment:
Q  80 atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||||| |||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||    
T  27309403 atcatttcaaa-ttgcatctgagtcagtttaggtcattttagtccctaggggcattttggtcttttcctgt 27309334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 29625999 - 29626073
Alignment:
Q  77 aaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||||||||| |||||| ||| |||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  29625999 aaaatcatttcaaaaattgcatttgagtcagtttgggtcagtttagtccctaggggcattttggtcttttcctgt 29626073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 4115090 - 4115015
Alignment:
Q  77 aaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||| |||||||||||||||||||| |||| |||||||| ||||| ||||||| ||||||| |||||||||||||||    
T  4115090 aaaaccatttcaaaattgcatctgagtcag-ttgagtcagtttaggccctaggagcattttagtcttttcctgtcaa 4115015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 153
Target Start/End: Original strand, 27180598 - 27180729
Alignment:
Q  25 atctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttc--aaaattgcatctgaatcaggttgagtcattttag 121  Q
    ||||||||||||||  || ||||||| |||||||||| |||| ||  ||||||||| ||||||   ||||||||||  ||  ||| ||| |||| |||||    
T  27180598 atctctgagtcttttcaatttgtctgtacaaatcattattgagtccttgtttaaaaatcattttcaaaaattgcattggaggcagtttgggtcagtttag 27180697  T
Q  122 tccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||| ||||||||||||||||||||||||||    
T  27180698 tccctgggggcattttggtcttttcctgtcaa 27180729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 27268641 - 27268510
Alignment:
Q  25 atctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttc--aaaattgcatctgaatcaggttgagtcattttag 121  Q
    ||||||||||||||  || ||||||| |||||||||| |||| ||  ||||||||| ||||||   ||||||||||  ||  ||| ||| |||| |||||    
T  27268641 atctctgagtcttttcaatttgtctgtacaaatcattattgagtccttgtttaaaaatcattttcaaaaattgcattggaggcagtttgggtcagtttag 27268542  T
Q  122 tccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||| ||||||||||||||||||||||||||    
T  27268541 tccctgggggcattttggtcttttcctgtcaa 27268510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 20154003 - 20154069
Alignment:
Q  80 atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||| |||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||    
T  20154003 atcatttcaaa-ttgcatctgattcagtttaggtcattttagtccctaggggcattttggtcttttcc 20154069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 22178829 - 22178763
Alignment:
Q  80 atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||| |||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||    
T  22178829 atcatttcaaa-ttgcatctgattcagtttaggtcattttagtccctaggggcattttggtcttttcc 22178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 16996037 - 16996106
Alignment:
Q  80 atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||||| |||||||||| |||| ||  ||||||||||||||||||||| |||||||||||||||||    
T  16996037 atcatttcaaa-ttgcatctgagtcagtttaggtcattttagtccctaggggcgttttggtcttttcctgt 16996106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 16769610 - 16769493
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||| ||  ||||||||||||||| ||| |||| |||| ||||||||||||||||||| | ||||          ||||||||    
T  16769610 tctctgagtcttttcaacttg-ctttacaaatcattgttgagtctttgttaaaaagtcatttcaaaattgcatctaagtcag----------tttagtcc 16769522  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  16769521 ctaggggcattttggtcttttcctgtcaa 16769493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 31539281 - 31539340
Alignment:
Q  88 aaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||||||||||||| |||| ||| |||| ||||||||| |||||||||||||||||||||    
T  31539281 aaaattgcatctgagtcagtttgggtcaatttagtccccaggggcattttggtcttttcc 31539340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 12966040 - 12965998
Alignment:
Q  108 ttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  12966040 ttgagtcagtttagtccctaggggcattttggtcttttcctgt 12965998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 16001897 - 16002028
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat---catttcaaaa---ttgcatctgaatcaggttga 111  Q
    ||||||| |||||||||||||  |||||||||| || |||||||||||| ||| |||||||||    ||||||||||   |||||||||| ||||         
T  16001897 tgtgtttgtctctgagtcttttcaacttgtctgtaccaatcattgttgagtctttgtttaaaaaaaccatttcaaaaaaattgcatctgagtcag----- 16001991  T
Q  112 gtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
         ||||||||||||||| |||||||||||||||||||||    
T  16001992 -----tttagtccctaggggtattttggtcttttcctgtcaa 16002028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 20178898 - 20178966
Alignment:
Q  80 atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||||| |||||||||| |||| ||  |||||||||||||||||||||| ||||||||||||||||    
T  20178898 atcatttcaaa-ttgcatctgagtcagtttaggtcattttagtccctaggggca-tttggtcttttcctgt 20178966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 22157093 - 22157025
Alignment:
Q  80 atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||||| |||||||||| |||| ||  |||||||||||||||||||||| ||||||||||||||||    
T  22157093 atcatttcaaa-ttgcatctgagtcagtttaggtcattttagtccctaggggca-tttggtcttttcctgt 22157025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 26993119 - 26993243
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttc-aaaattgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||  ||||||||||| |||||||||||||| ||||            
T  26993119 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcag-------- 26993210  T
Q  115 attttagtccctaggggcattttggtcttttcctgt 150  Q
       |||||||||||||||||||||||||||||||||    
T  26993211 ---ttagtccctaggggcattttggtcttttcctgt 26993243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 27027462 - 27027586
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttc-aaaattgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||  ||||||||||| |||||||||||||| ||||            
T  27027462 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcag-------- 27027553  T
Q  115 attttagtccctaggggcattttggtcttttcctgt 150  Q
       |||||||||||||||||||||||||||||||||    
T  27027554 ---ttagtccctaggggcattttggtcttttcctgt 27027586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 14136629 - 14136588
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  14136629 tcccaaaattgcattttttgtccaaacagtttttaatttcat 14136588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 14148700 - 14148659
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  14148700 tcccaaaattgcattttttgtccaaacagtttttaatttcat 14148659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 27294914 - 27294873
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  27294914 tcccaaaattgcattttttgtccaaacagtttttaatttcat 27294873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 27295185 - 27295081
Alignment:
Q  45 tgtctgcacaaatcattgttgaatctctgttt--aaaatcatttc-aaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtc 141  Q
    |||||| ||||||||||||||||||||| |||  ||||||||||| |||||||||| ||| || | ||  ||||||||   |||||||||||||||||||    
T  27295185 tgtctgtacaaatcattgttgaatctctttttaaaaaatcatttcaaaaattgcatttgagtctgtttaggtcatttttagccctaggggcattttggtc 27295086  T
Q  142 ttttc 146  Q
     ||||    
T  27295085 atttc 27295081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 6874134 - 6874172
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  6874134 tgagtcagtttagtccctaggggcattttggtcttttcc 6874172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 21786933 - 21787007
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaaaa 91  Q
    |||||||  ||||||||||||  |||| ||||| ||||||||||||||| ||| ||||| |||||||||||||||    
T  21786933 tgtgtttgcctctgagtcttttcaactggtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaa 21787007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 20215040 - 20215081
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  20215040 tcccaaaattgcattttttgtccaaaaagtttttaatttcat 20215081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 22109063 - 22109104
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  22109063 tcccaaaattgcattttttgtccaaaaagtttttaatttcat 22109104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 27282254 - 27282213
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  27282254 tcccaaaatcgcattttttgtccaaacagtttttaatttcat 27282213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 18937724 - 18937768
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||    
T  18937724 tgagtcagtttagtccccgggggcattttggtcttttcctgtcaa 18937768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 16762232 - 16762262
Alignment:
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||    
T  16762232 ccctaggggcattttggtcttttcctgtcaa 16762262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 28158075 - 28158208
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttta--aaatcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||||| | || ||| | || |  |||| ||||||||| |||||| ||| |||  | |||||    
T  28158075 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattatcgagtctttattaagaaaataatttcaaaaattgcatttgagtcaattcgagtc 28158174  T
Q  115 attttagtccctaggggcattttggtcttttcct 148  Q
    | | |||||||||||||| |||||||||||||||    
T  28158175 agtctagtccctaggggcgttttggtcttttcct 28158208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 28169116 - 28169249
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttta--aaatcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||||| | || ||| | || |  |||| ||||||||| |||||| ||| |||  | |||||    
T  28169116 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattatcgagtctttattaagaaaataatttcaaaaattgcatttgagtcaattcgagtc 28169215  T
Q  115 attttagtccctaggggcattttggtcttttcct 148  Q
    | | |||||||||||||| |||||||||||||||    
T  28169216 agtctagtccctaggggcgttttggtcttttcct 28169249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 3691140 - 3691181
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||| |||| |||| ||||||||||||||||||||||    
T  3691140 tcccaaaatcgcatattttgtccaaacagtttttaatttcat 3691181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4115161 - 4115105
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgt 74  Q
    ||||||| |||||||||||||  ||||||| |  ||||||||||||||||||| |||    
T  4115161 tgtgtttgtctctgagtcttttcaacttgtttttacaaatcattgttgaatctttgt 4115105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 3e-54; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 19372357 - 19372234
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    |||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19372357 tctctgagtctttttaacttgtatgtacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 19372258  T
Q  126 taggggcattttggtcttttcctg 149  Q
    ||||||||||||||||||||||||    
T  19372257 taggggcattttggtcttttcctg 19372234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 8344159 - 8344293
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcatt 117  Q
    ||||||| |||||||||||||  |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  8344159 tgtgtttgtctctgagtcttttcaacttgtctgtacaaatcattgttgaatctctttttaaaatcatttcaaaactgcatctgaatcaggttgtgtcatt 8344258  T
Q  118 ttagtccctaggggcattttggtcttttcctgtca 152  Q
    |||||||||| ||||||||||||||||||||||||    
T  8344259 ttagtccctatgggcattttggtcttttcctgtca 8344293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 17785443 - 17785570
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    |||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||    
T  17785443 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaatcactacaaaattgcatctgagtcaggttgagtcattttagtccc 17785542  T
Q  126 taggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||    
T  17785543 taggggcattttggtcttttcctgtcaa 17785570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 19086963 - 19087090
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    |||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||    
T  19086963 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaatcactacaaaattgcatctgagtcaggttgagtcattttagtccc 19087062  T
Q  126 taggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||    
T  19087063 taggggcattttggtcttttcctgtcaa 19087090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 37187199 - 37187072
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    |||||||||||||  || ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  37187199 tctctgagtctttttaaattgtctgtacaaatcattgttgaagctctgtttaaaatcatttcaaaattgcatctaagtcaggttgagtcattttagtccc 37187100  T
Q  126 taggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||    
T  37187099 taggggcattttggtcttttcctgtcaa 37187072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 15366540 - 15366411
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa--ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  |||||||||| |||||||| ||||||||||||||||||||  |||||||||  |||||||||| |||||||||||||||||||||    
T  15366540 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaactatttcaaaaaattgcatctgagtcaggttgagtcattttagtc 15366441  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||    
T  15366440 cctaggggcattttggtcttttcctgtcaa 15366411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 14144013 - 14143885
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||| ||||||||    
T  14144013 tctctgagtctttttaacttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaaattacatctgagtcagtttgagtcagtttagtcc 14143914  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||| |||||||    
T  14143913 ctaggggcattttggtctttttctgtcaa 14143885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 28168303 - 28168202
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtc 151  Q
    |||||||| |||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28168303 acaaatcactgttgagtctttgtttaaaatcatttcaaaattgcatctgagtcaggttgagtcattttagtccctaggggcattttggtcttttcctgtc 28168204  T
Q  152 aa 153  Q
    ||    
T  28168203 aa 28168202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18060354 - 18060489
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcatt 117  Q
    |||||||  ||||||||||||  ||  |||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| ||| ||||||    
T  18060354 tgtgtttgcctctgagtcttttcaatctgtctgtacaaatcattgttgaatctctttttaaaatcatttcaaaattgcatttgagtcagtttgggtcatt 18060453  T
Q  118 ttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||| |||||||    
T  18060454 ttagtccctaggggcattttggtctttttctgtcaa 18060489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 8281563 - 8281426
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  8281563 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 8281464  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  8281463 gtttagtccctaggggcattttggtcttttcctgtcaa 8281426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 8310373 - 8310236
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  8310373 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 8310274  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  8310273 gtttagtccctaggggcattttggtcttttcctgtcaa 8310236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 34803623 - 34803487
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcat 116  Q
    |||||||  ||||||||||||   ||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||| ||| |||| ||| ||||     
T  34803623 tgtgtttgcctctgagtcttttcgacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaattgcatttgagtcagtttgggtcag 34803524  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  34803523 tttagtccctaggggcattttggtcttttcctgtcaa 34803487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 22394433 - 22394295
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||| |||||||||||||  || |||| || ||||||| ||||||| ||| ||||||||| ||||||||||| |||||||||| |||| |||||||    
T  22394433 atgtgtttgtctctgagtcttttcaatttgtttgtacaaatctttgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 22394334  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  22394333 agtttagtccctaggggcattttggtcttttcctgtcaa 22394295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 11263343 - 11263206
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||  ||||||||    
T  11263343 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcaatttgagtca 11263244  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  11263243 gtttagtccctaggggcattttggtcttttcctgtcaa 11263206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 19926036 - 19926161
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| ||||||||||| |||||||||| |||| |||||||| ||||||||    
T  19926036 ctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcagtttgagtcagtttagtcc 19926135  T
Q  125 ctaggggcattttggtcttttcctgt 150  Q
    ||||||||||||||||||||||||||    
T  19926136 ctaggggcattttggtcttttcctgt 19926161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 22379499 - 22379362
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  || |||| || ||||||| ||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  22379499 tgtgtttgtctctgagtcttttcaatttgtttgtacaaatctttgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 22379400  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  22379399 gtttagtccctaggggcattttggtcttttcctgtcaa 22379362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 10598352 - 10598490
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    ||||||||  ||||||||||||  || ||||||| |||||||||||||||  || ||||||||| ||||||||||| |||||||||| |||  |||||||    
T  10598352 atgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagcctttgtttaaaaatcatttcaaaaattgcatctgagtcaatttgagtc 10598451  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  10598452 agtttagtccctaggggcattttggtcttttcctgtcaa 10598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 4682033 - 4682170
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || |||||||||||| |||  |||||||| ||||||||||| |||||||||| |||| ||||||||    
T  4682033 tgtgtttgcctctgagtcttttcaacctgtctgtacgaatcattgttgagtcttcgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 4682132  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  4682133 gtttagtccctaggggcattttggtcttttcctgtcaa 4682170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 4692139 - 4692276
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || |||||||||||| |||  |||||||| ||||||||||| |||||||||| |||| ||||||||    
T  4692139 tgtgtttgcctctgagtcttttcaacctgtctgtacgaatcattgttgagtcttcgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 4692238  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  4692239 gtttagtccctaggggcattttggtcttttcctgtcaa 4692276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 5644928 - 5645065
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| | ||||||    
T  5644928 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagttggagtca 5645027  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  5645028 gtttagtccctaggggcattttggtcttttcctgtcaa 5645065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 5660351 - 5660488
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| | ||||||    
T  5660351 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagttggagtca 5660450  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  5660451 gtttagtccctaggggcattttggtcttttcctgtcaa 5660488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 8107836 - 8107699
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||||  ||| ||||||||    
T  8107836 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcgttgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagccagtttgagtca 8107737  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  8107736 gtttagtccctaggggcattttggtcttttcctgtcaa 8107699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 16424371 - 16424508
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||| ||||||||||||||| |||||| ||| |||| ||| ||||    
T  16424371 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgttttaaaatcatttcaaaaattgcatttgagtcagtttgggtca 16424470  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||| ||||    
T  16424471 gtttagtccctaggggcattttggtcttttcctctcaa 16424508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 4714745 - 4714857
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  4714745 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 4714844  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  4714845 cttttcctgtcaa 4714857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 4729925 - 4730037
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  4729925 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 4730024  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  4730025 cttttcctgtcaa 4730037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 5202719 - 5202847
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||| |||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||| |||| ||||||||    
T  5202719 ctctaagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgggtcagtttagtcc 5202818  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  5202819 ctaggggcattttggtcttttcctgtcaa 5202847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 6185426 - 6185538
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  6185426 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 6185525  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  6185526 cttttcctgtcaa 6185538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 6210193 - 6210305
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  6210193 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 6210292  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  6210293 cttttcctgtcaa 6210305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 8289057 - 8289186
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtc 123  Q
    ||||||| ||||  || ||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| |||  |||||||| |||||||    
T  8289057 ctctgagccttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcaatttgagtcagtttagtc 8289156  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||    
T  8289157 cctaggggcattttggtcttttcctgtcaa 8289186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 26828354 - 26828221
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    ||||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| |||||||||  ||||||||||| ||||||||||  ||| ||||||    
T  26828354 atgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagccagtttgagt 26828255  T
Q  114 cattttagtccctaggggcattttggtcttttcc 147  Q
    || |||||||||||||||||||||||||||||||    
T  26828254 cagtttagtccctaggggcattttggtcttttcc 26828221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 1735389 - 1735252
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || |||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| | ||||||    
T  1735389 tgtgtttgcctctgagtcttttcaacctgtctgtacgaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagttcgagtca 1735290  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||||||||||||||||||||||||| |||||    
T  1735289 gtttagtccctaggggcattttggtcttttccagtcaa 1735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 4443181 - 4443310
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  || ||||||| ||||| ||||||||||||| ||||||||| ||||||||||| |||||||| | ||||  ||||||| |||||||    
T  4443181 tctctgagtcttttcaatttgtctgtacaaaccattgttgaatctttgtttaaaaatcatttcaaaaattgcatctaagtcagtctgagtcagtttagtc 4443280  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||||||||||||||||||    
T  4443281 cccaggggcattttggtcttttcctgtcaa 4443310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 35873905 - 35874034
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  || |||| || ||||||| ||||||| ||| ||||||||| ||||||||||| |||||||||| |||| |||||||| |||||||    
T  35873905 tctctgagtcttttcaatttgtttgtacaaatctttgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtc 35874004  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||| ||||||    
T  35874005 cctaggggcattttggtcttttcttgtcaa 35874034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 35888974 - 35889103
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  || |||| || ||||||| ||||||| ||| ||||||||| ||||||||||| |||||||||| |||| |||||||| |||||||    
T  35888974 tctctgagtcttttcaatttgtttgtacaaatctttgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtc 35889073  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||| ||||||    
T  35889074 cctaggggcattttggtcttttcttgtcaa 35889103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 15659811 - 15659711
Alignment:
Q  53 caaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtca 152  Q
    |||||||||||| ||||||| ||||||||||| |||||||| ||| ||| |||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  15659811 caaatcattgttaaatctctttttaaaatcatctcaaaattacatttgagtcagtttgggtcagtttagtccctaggggcattttggtcttttcctgtca 15659712  T
Q  153 a 153  Q
    |    
T  15659711 a 15659711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 18323764 - 18323876
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||| | ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  18323764 aacttgtctgtacaaatcatcgttaattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 18323863  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  18323864 cttttcctgtcaa 18323876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 4881852 - 4881990
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  ||| ||||||  | ||| |||||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  4881852 tgtgtttgcctctgagtcttttcaacctgtctgtgcgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 4881951  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  4881952 agtttagtccctaggggcattttggtcttttcctgtcaa 4881990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 9724353 - 9724215
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |  ||| |||||||| ||| |||||||||  ||||||||||| |||||||||| ||||  ||||||    
T  9724353 tgtgtttgcctctgagtcttttcaacttgtctgtatgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtctgagtc 9724254  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  9724253 agtttagtccctaggggcattttggtcttttcctgtcaa 9724215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 16066019 - 16065879
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa----tcatttcaaaa-ttgcatctgaatcaggttgag 112  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| |||||||||    ||||||||||| |||||||||| |||| ||| |    
T  16066019 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaaaatcatttcaaaaattgcatctgagtcagtttggg 16065920  T
Q  113 tcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||| |||||||||| ||||||||||||||||||||||||||    
T  16065919 tcagtttagtccctgggggcattttggtcttttcctgtcaa 16065879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 19702512 - 19702650
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||| ||||||||  |||||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| |||| ||| |||    
T  19702512 tgtgtttgcctcggagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagcttgggtc 19702611  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||| | ||||||||||||||||||||||||    
T  19702612 agtttagtccctggtggcattttggtcttttcctgtcaa 19702650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15884679 - 15884541
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||| ||||| ||||||||||||||| ||| ||||| ||||||||||| |||||||||||||| |||| ||| ||||    
T  15884679 tgtgtttgcctctgagtcttttcaactggtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgggtca 15884580  T
Q  116 ttttagtccct-aggggcattttggtcttttcctgtcaa 153  Q
     ||||||||||  ||||||||||||||||||||||||||    
T  15884579 gtttagtccctggggggcattttggtcttttcctgtcaa 15884541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 32966484 - 32966345
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttcaaaattgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||||||   ||||||||||||||||||||| |||  ||| |||    
T  32966484 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaaatcatttcaaaattgcatctgagtcaatttgggtc 32966385  T
Q  115 attttagtcccta-ggggcattttggtcttttcctgtcaa 153  Q
    | ||||||||||| ||||||||||||||||||||||||||    
T  32966384 agtttagtccctagggggcattttggtcttttcctgtcaa 32966345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 4803566 - 4803426
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtt-----taaaatcatttcaaaattgcatctgaatcaggttgag 112  Q
    |||||||  ||||||||||||  || ||||||| ||||||||| ||||| ||| ||||      ||||||||||||||||||||| ||| |||| ||| |    
T  4803566 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcatcgttgagtctttgttaaaaaaaaaatcatttcaaaattgcatttgagtcagtttggg 4803467  T
Q  113 tcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  4803466 tcagtttagtccctaggggcattttggtcttttcctgtcaa 4803426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 9528166 - 9528293
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||| ||  |||||||||||| || ||| |||| |||| ||||||||||||||||||| | |||| |||||||| ||||||||    
T  9528166 tctctgagtcttttcaacttg-ctttacaaatcattgtggagtctttgttaaaaagtcatttcaaaattgcatctaagtcagtttgagtcagtttagtcc 9528264  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||| |||||||||||||||    
T  9528265 ctaggggcatttttgtcttttcctgtcaa 9528293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 18338861 - 18338973
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||| | ||| |||| |||||||||||||||| |||||||| |||  |||  ||| ||||||||||||||||||||||||    
T  18338861 aacttgtctgtacaaatcatcgttaattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttggatcagtttagtccctaggggcattttggt 18338960  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  18338961 cttttcctgtcaa 18338973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 28010686 - 28010798
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||| | ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  28010686 aacttgtctgtacaaatcatcgttaattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 28010785  T
Q  141 cttttcctgtcaa 153  Q
     ||||||||||||    
T  28010786 tttttcctgtcaa 28010798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 4447274 - 4447412
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||| | |||||| ||| |||||||||  ||||||||||| |||||||||| |||  ||| |||    
T  4447274 tgtgtttgcctctgagtcttttcaacttgtctgtacaaattactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcaatttgggtc 4447373  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||| ||||||||||||||||||||||||||    
T  4447374 agtttagtcccttggggcattttggtcttttcctgtcaa 4447412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 4651909 - 4652051
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat-----catttcaaaa--ttgcatctgaatcaggttg 110  Q
    ||||||| |||||||||||||  ||| |||||| ||||||||||||||| ||| |||||||||      ||||||||||  | |||||||| |||| |||    
T  4651909 tgtgtttgtctctgagtcttttcaacctgtctgtacaaatcattgttgagtctttgtttaaaaaaaaaccatttcaaaaaatcgcatctgagtcagtttg 4652008  T
Q  111 agtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  4652009 agtcagtttagtccctaggggcattttggtcttttcctatcaa 4652051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 10411865 - 10411991
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||| ||  |||||||||||| || ||| |||| |||| ||||||||||||| ||||||| |||| |||||||| ||||||||    
T  10411865 tctctgagtcttttcaacttg-ctttacaaatcattgtggagtctttgttaaaaagtcatttcaaaattacatctgagtcagtttgagtcagtttagtcc 10411963  T
Q  125 ctaggggcattttggtcttttcctgtca 152  Q
    ||||||||||||| ||||||||||||||    
T  10411964 ctaggggcatttttgtcttttcctgtca 10411991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15899858 - 15899720
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||| ||||| ||||||||||||||| ||| ||||| ||||||||||| |||||||||||||| |||| ||| ||||    
T  15899858 tgtgtttgcctctgagtcttttcaactggtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgggtca 15899759  T
Q  116 ttttagtccct-aggggcattttggtcttttcctgtcaa 153  Q
     ||||||||||  |||||||||||||||||||| |||||    
T  15899758 gtttagtccctggggggcattttggtcttttccagtcaa 15899720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 14454123 - 14454022
Alignment:
Q  53 caaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtcccta-ggggcattttggtcttttcctgtc 151  Q
    |||||||||||| ||||||| ||||||||||| |||||||| ||| ||| |||| ||| |||| ||||||||||| ||||||||||||||||||||||||    
T  14454123 caaatcattgttaaatctctttttaaaatcatctcaaaattacatttgagtcagtttgggtcagtttagtccctagggggcattttggtcttttcctgtc 14454024  T
Q  152 aa 153  Q
    ||    
T  14454023 aa 14454022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 29898541 - 29898664
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  ||||||| |  ||||||||||||||| ||| |||| ||||  ||||||||||| |||||||||| |||| |||||||| ||||||    
T  29898541 tctctgagtcttttcaacttgtttt-acaaatcattgttgattctttgttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagt 29898639  T
Q  123 ccctaggggcattttggtcttttcc 147  Q
    |||||||||||||||||||||||||    
T  29898640 ccctaggggcattttggtcttttcc 29898664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 29940501 - 29940624
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  ||||||| |  ||||||||||||||| ||| |||| ||||  ||||||||||| |||||||||| |||| |||||||| ||||||    
T  29940501 tctctgagtcttttcaacttgtttt-acaaatcattgttgattctttgttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagt 29940599  T
Q  123 ccctaggggcattttggtcttttcc 147  Q
    |||||||||||||||||||||||||    
T  29940600 ccctaggggcattttggtcttttcc 29940624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 29989655 - 29989778
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  ||||||| |  ||||||||||||||| ||| |||| ||||  ||||||||||| |||||||||| |||| |||||||| ||||||    
T  29989655 tctctgagtcttttcaacttgtttt-acaaatcattgttgattctttgttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagt 29989753  T
Q  123 ccctaggggcattttggtcttttcc 147  Q
    |||||||||||||||||||||||||    
T  29989754 ccctaggggcattttggtcttttcc 29989778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 35568760 - 35568623
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || |||||||||||  ||| ||||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  35568760 tgtgtttgcctctgagtcttttcaacttgtctgtacgaatcattgttgggtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 35568661  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||| ||||||||||||||||||||||| ||||    
T  35568660 gtttagtccttaggggcattttggtcttttcctatcaa 35568623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 19630077 - 19629934
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat------catttcaaaa-ttgcatctgaatcaggtt 109  Q
    |||||| | |||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||       |||||||||| ||||||| || ||||  |    
T  19630077 atgtgtctgtctctgagtctttttaacttgtctgtacaaatcactgttgagtctttgtttaaaaaaaaaaccatttcaaaaattgcatcagagtcagtct 19629978  T
Q  110 gagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  19629977 gagtcagtttagtccctaggggcattttggtcttttcctgtcaa 19629934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 18523614 - 18523739
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtt----taaaatcatttc-aaaattgcatctgaatcaggttgagtcatttta 120  Q
    |||||||||||||  ||||||| |  ||||||||||||||| ||| ||||     ||||||||||| |||||||||||||| |||| |||||||| ||||    
T  18523614 tctctgagtcttttcaacttgtttt-acaaatcattgttgagtctttgttaaaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagttta 18523712  T
Q  121 gtccctaggggcattttggtcttttcc 147  Q
    |||||||||||||||||||||||||||    
T  18523713 gtccctaggggcattttggtcttttcc 18523739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 19447113 - 19447254
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat-----catttcaaaa-ttgcatctgaatcaggttga 111  Q
    |||||||  |||||| |||||  |||||||||| |||||||||| | || ||| |||||||||      |||||||||| || ||||||| |||| ||||    
T  19447113 tgtgtttgcctctgattcttttcaacttgtctgtacaaatcattctcgagtctttgtttaaaaaaaaaccatttcaaaaattccatctgagtcagtttga 19447212  T
Q  112 gtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  19447213 gtcagtttagtccctaggggcattttggtcttttcctgtcaa 19447254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 4788665 - 4788589
Alignment:
Q  77 aaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||| ||| |||| ||| |||| ||||||||||||||||||||||||||||| |||||||    
T  4788665 aaaatcatttcaaaattgcatttgagtcagtttgggtcagtttagtccctaggggcattttggtctttttctgtcaa 4788589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 10932118 - 10932047
Alignment:
Q  77 aaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  10932118 aaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcc 10932047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 8229181 - 8229053
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||| |||||||| ||| |||||||||  ||||||||||| |||||||||| ||||            
T  8229181 tgtgtttgcctctgagtcttttcaacttgtctgtacaaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcag-------- 8229090  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      |||||||||||||||||||||||||||||||||||||    
T  8229089 --tttagtccctaggggcattttggtcttttcctgtcaa 8229053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15733153 - 15733026
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||| ||||||| || ||||||||||||| ||||||||||| |||||||||| ||||             
T  15733153 tgtgtttgcctctgagtcttttcaatttgtctgtacaagtcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcag--------- 15733063  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15733062 -tttagtccctaggggcattttggtcttttcctgtcaa 15733026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15748238 - 15748111
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||| ||||||| || ||||||||||||| ||||||||||| |||||||||| ||||             
T  15748238 tgtgtttgcctctgagtcttttcaatttgtctgtacaagtcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcag--------- 15748148  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15748147 -tttagtccctaggggcattttggtcttttcctgtcaa 15748111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 18044323 - 18044416
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttga 111  Q
    |||||||  ||||||||||||  ||  ||| || ||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| ||||    
T  18044323 tgtgtttgcctctgagtcttttcaatctgtttgtacaaatcattgttgaatctctttttaaaatcatttcaaaattgcatttgagtcagtttga 18044416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 19445372 - 19445429
Alignment:
Q  96 atctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  19445372 atctgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 19445429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 17902477 - 17902605
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa--ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||||| |||| ||| ||||||||| |||||||||||  |||||||||| ||||            
T  17902477 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattattgagtctttgtttaaaaatcatttcaaaaaattgcatctgagtcag-------- 17902568  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      |||||||||||||||||||||||||||||||||||||    
T  17902569 --tttagtccctaggggcattttggtcttttcctgtcaa 17902605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18000715 - 18000843
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||||||  ||||||||||| |||||||||| ||||            
T  18000715 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcag-------- 18000806  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      |||||||||||||||||||||||||||||||||||||    
T  18000807 --tttagtccctaggggcattttggtcttttcctgtcaa 18000843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 4886680 - 4886724
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  4886680 tgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 4886724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 11649355 - 11649284
Alignment:
Q  77 aaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||||||| ||||||||||   || |||||||| ||||||||| |||||||||||||||||||||    
T  11649355 aaaatcatttcaaaaattgcatctgaggtagtttgagtcaatttagtccccaggggcattttggtcttttcc 11649284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 22120733 - 22120695
Alignment:
Q  112 gtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22120733 gtcattttagtccctaggggcattttggtcttttcctgt 22120695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 1775053 - 1775094
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  1775053 tcccaaaattgcattttttgtccaaacagtttttaatttcat 1775094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 4621658 - 4621699
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  4621658 tcccaaaattgcattttttgtccaaacagtttttaatttcat 4621699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 4632662 - 4632703
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  4632662 tcccaaaattgcattttttgtccaaacagtttttaatttcat 4632703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 30009460 - 30009419
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  30009460 tcccaaaattgcattttttgtccaaacagtttttaatttcat 30009419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 31027740 - 31027699
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  31027740 tcccaaaattgcattttttgtccaaacagtttttaatttcat 31027699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 31038161 - 31038120
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  31038161 tcccaaaattgcattttttgtccaaacagtttttaatttcat 31038120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 15369443 - 15369481
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  15369443 tgagtcagtttagtccctaggggcattttggtcttttcc 15369481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 15478142 - 15478104
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  15478142 tgagtcagtttagtccctaggggcattttggtcttttcc 15478104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 16616811 - 16616773
Alignment:
Q  108 ttgagtcattttagtccctaggggcattttggtcttttc 146  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  16616811 ttgagtcagtttagtccctaggggcattttggtcttttc 16616773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 22042346 - 22042384
Alignment:
Q  108 ttgagtcattttagtccctaggggcattttggtcttttc 146  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  22042346 ttgagtcagtttagtccctaggggcattttggtcttttc 22042384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 25000829 - 25000792
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatt 275  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  25000829 tcccaaaattgcattttttgtccaaacagtttttaatt 25000792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 29140363 - 29140326
Alignment:
Q  242 aaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  29140363 aaaattgcattttttgtccaaacagtttttaatttcat 29140326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 29155168 - 29155131
Alignment:
Q  242 aaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  29155168 aaaattgcattttttgtccaaacagtttttaatttcat 29155131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 16632997 - 16632868
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttcaaaattgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  ||||||| |  |||||| | |||||| ||| ||| |  |||| |||||||||||||| ||||| ||    |||||||    
T  16632997 tgtgtttgtctctgagtcttttcaacttgt-tttacaaataactgttgagtctttgtctaaaaaaccatttcaaaattgcgtctgagtctatctgagtca 16632899  T
Q  116 ttttagtccctaggggcattttggtcttttc 146  Q
     ||||  ||||||||||||||||||||||||    
T  16632898 gtttaaaccctaggggcattttggtcttttc 16632868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 36133599 - 36133476
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||| |||||||||||||  ||||||| |  |||||||| |||||| ||| ||||||||| | ||||||||||||| ||||| || |              
T  36133599 tgtgtttgtctctgagtcttttcaacttgtttt-acaaatcactgttgagtctttgtttaaaaaccatttcaaaattgcgtctgagtctg---------- 36133511  T
Q  117 tttagtccctaggggcattttggtcttttcctgtc 151  Q
    ||||||||||||||||||||| |||||||||||||    
T  36133510 tttagtccctaggggcattttagtcttttcctgtc 36133476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 1987901 - 1987863
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  1987901 tgagtcagtttagtccctaggggcattttggtctgttcc 1987863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 9097794 - 9097756
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  9097794 tgagtcagtttagaccctaggggcattttggtcttttcc 9097756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 19273652 - 19273726
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaaaa 91  Q
    |||||||  ||||||||||||  || ||||| | ||||||||||||||| ||| ||||| |||||||||||||||    
T  19273652 tgtgtttgcctctgagtcttttcaatttgtcggtacaaatcattgttgagtctttgtttaaaaatcatttcaaaa 19273726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 20052316 - 20052354
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaattt 276  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  20052316 tcccaaaattgcattttttgtccaaacagttttttattt 20052354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 20074976 - 20075014
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaattt 276  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  20074976 tcccaaaattgcattttttgtccaaacagttttttattt 20075014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 28357511 - 28357644
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttta--aaatcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||||| | || ||| | || |  |||| ||||||||| |||||| ||| |||  | |||||    
T  28357511 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattatcgagtctttattaagaaaataatttcaaaaattgcatttgagtcaattcgagtc 28357610  T
Q  115 attttagtccctaggggcattttggtcttttcct 148  Q
    | | |||||||||||||| |||||||||||||||    
T  28357611 agtctagtccctaggggcgttttggtcttttcct 28357644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 4886594 - 4886669
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttcaaaa 91  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||  |||||||||||||||    
T  4886594 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaa 4886669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0748 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0748
Description:

Target: scaffold0748; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 454 - 327
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    |||||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  454 tctctgagtctttttaaattgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctaagtcatgttgagtcattttagtccc 355  T
Q  126 taggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||    
T  354 taggggcattttggtcttttcctgtcaa 327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 23885382 - 23885518
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| ||| |||| ||||||||     
T  23885382 tgtgtttgtctctgagtcttttaaacttgtctgtacaaatcattgttgaatctctatttaaaatcatttcaaaaattgcatttgagtcagtttgagtcag 23885481  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  23885482 tttagtccctaggggcattttggtcttttcctgtcaa 23885518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 29884264 - 29884137
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  29884264 tctctgagtctttctaacttgtctgtacaaatcattgttgaatctcttttttaaaatcatttcaaaactgcatctgagtcaggttgggtcattttagtcc 29884165  T
Q  125 ctaggggcattttggtcttttcctgtca 152  Q
    ||||||||||||||||||||||||||||    
T  29884164 ctaggggcattttggtcttttcctgtca 29884137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 22274900 - 22274764
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcat 116  Q
    ||||||| |||||||||||||  ||||||||||  |||||||||||||| ||||||||||||| |||||||||| |||||||||| |||| ||||||||     
T  22274900 tgtgtttgtctctgagtcttttcaacttgtctgtgcaaatcattgttgagtctctgtttaaaaccatttcaaaaattgcatctgagtcagtttgagtcag 22274801  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  22274800 tttagtccctaggggcattttggtcttttcctgtcaa 22274764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 24614463 - 24614334
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa--ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  |||||||||| |||||||| |||||||||||||||||||| ||||||||||  |||||||||| ||||  ||||||| |||||||    
T  24614463 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaaccatttcaaaaaattgcatctgagtcagtctgagtcaatttagtc 24614364  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||    
T  24614363 cctaggggcattttggtcttttcctgtcaa 24614334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 24710862 - 24710733
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa--ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  |||||||||| |||||||| |||||||||||||||||||| ||||||||||  |||||||||| ||||  ||||||| |||||||    
T  24710862 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaaccatttcaaaaaattgcatctgagtcagtctgagtcaatttagtc 24710763  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||    
T  24710762 cctaggggcattttggtcttttcctgtcaa 24710733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 24743858 - 24743729
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa--ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  |||||||||| |||||||| |||||||||||||||||||| ||||||||||  |||||||||| ||||  ||||||| |||||||    
T  24743858 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaaccatttcaaaaaattgcatctgagtcagtctgagtcagtttagtc 24743759  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||    
T  24743758 cctaggggcattttggtcttttcctgtcaa 24743729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 24756626 - 24756497
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa--ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  |||||||||| |||||||| |||||||||||||||||||| ||||||||||  |||||||||| ||||  | ||||| |||||||    
T  24756626 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaaccatttcaaaaaattgcatctgagtcagtctaagtcagtttagtc 24756527  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||    
T  24756526 cctaggggcattttggtcttttcctgtcaa 24756497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 20582352 - 20582226
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||          ||||||||     
T  20582352 tgtgtttatctctcagtcttttaaacttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaaattgcat----------ttgagtcag 20582263  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  20582262 tttagtccctaggggcattttggtcttttcctgtcaa 20582226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 21832257 - 21832394
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttca-aaattgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| |||||||| ||||||||||||| |||| ||||||||    
T  21832257 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcagaaattgcatctgagtcagtttgagtca 21832356  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  21832357 gtttagtccctaggggcattttggtcttttcctgtcaa 21832394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 23900033 - 23900159
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||          |||||||||    
T  23900033 tgtgtttgtctctgagtcttttaaacttgtctgtacaaatcattgttgaatctctatttaaaatcatttcaaaaattgcat----------ttgagtcat 23900122  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  23900123 tttagtccctaggggcattttggtcttttcctgtcaa 23900159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 30467449 - 30467311
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||||| |||| ||||||||    
T  30467449 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgaatctctgtttaaaaaccatttcaaaaattgcatctgagtcagtttgagtca 30467350  T
Q  116 ttttagtccctaggggca-ttttggtcttttcctgtcaa 153  Q
     ||||||||||||||| | ||||||||||||||||||||    
T  30467349 gtttagtccctaggggtatttttggtcttttcctgtcaa 30467311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 20196055 - 20195918
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| ||||||| |||||||||||||| |||| ||||||||    
T  20196055 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgattctttgtttaaaaatcatttcgaaaattgcatctgagtcagtttgagtca 20195956  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  20195955 gtttagtccctaggggcattttggtcttttcctgtcaa 20195918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 30954625 - 30954762
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| | ||||||||| |||||||||| |||| ||||||||    
T  30954625 tgtgttttcctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtaatttcaaaaattgcatctgagtcagtttgagtca 30954724  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  30954725 gtttagtccctaggggcattttggtcttttcctgtcaa 30954762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 35873847 - 35873717
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa----ttgcatctgaatcaggttgagtcattttagt 122  Q
    ||||||||||||  |||||||||| ||||||||||||| | ||| ||||||||||||||||||||    |||||||||| |||| ||| |||| ||||||    
T  35873847 ctctgagtcttttcaacttgtctgtacaaatcattgttaagtctttgtttaaaatcatttcaaaaaaaattgcatctgagtcagtttgggtcagtttagt 35873748  T
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||    
T  35873747 ccctaggggcattttggtcttttcctgtcaa 35873717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 18064061 - 18063925
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcat 116  Q
    |||||||  ||||||| ||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||| ||| ||||  |||||||     
T  18064061 tgtgtttgcctctgagccttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaattgcatttgagtcagtctgagtcag 18063962  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  18063961 tttagtccctaggggcattttggtcttttcctgtcaa 18063925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 27291637 - 27291499
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||  ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| |||| ||| |||    
T  27291637 tgtgtttgcctctgagtcttttcaacttgtctatacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgggtc 27291538  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  27291537 agtttagtccctaggggcattttggtcttttcctgtcaa 27291499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 34499370 - 34499232
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    ||||||||  ||||||||||||  |||||||||| ||||||||||||||| |||  |||||||| ||||||||||| |||||| ||| |||| ||| |||    
T  34499370 atgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtcttcgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtc 34499271  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  34499270 agtttagtccctaggggcattttggtcttttcctgtcaa 34499232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 573198 - 573061
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  573198 tgtgtttgcctctgagtcttttcaacctgtctgtacgaattattgttgagtctttgtttaaaagtcatttcaaaaattgcatctgagtcagtttgagtca 573099  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  573098 gtttagtccctaggggcattttggtcttttcctgtcaa 573061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 7813832 - 7813968
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||  |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  7813832 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtccttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtc 7813931  T
Q  115 attttagtccctaggggcattttggtcttttcctgtc 151  Q
    | |||||||||||||||||||||||||||||||||||    
T  7813932 agtttagtccctaggggcattttggtcttttcctgtc 7813968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 11557555 - 11557692
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||| ||||||| ||| ||||||||| ||||||||||| |||||||||| |||  ||||||||    
T  11557555 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcgttgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcaatttgagtca 11557654  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  11557655 gtttagtccctaggggcattttggtcttttcctgtcaa 11557692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18081550 - 18081687
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| |||  |||    
T  18081550 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttggatca 18081649  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  18081650 gtttagtccctaggggcattttggtcttttcctgtcaa 18081687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 25506624 - 25506487
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  |||| |||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  25506624 tgtgtttgcctctaagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 25506525  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  25506524 gtttagtccctaggggcattttggtcttttcctgtcaa 25506487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 3941573 - 3941712
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa--ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| |||||||||||  |||||||||| |||| |||||||    
T  3941573 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaaattgcatctgagtcagtttgagtc 3941672  T
Q  115 attttagtcccta-ggggcattttggtcttttcctgtcaa 153  Q
    | ||||||||||| ||||||||||||||||||||||||||    
T  3941673 agtttagtccctagggggcattttggtcttttcctgtcaa 3941712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 22991058 - 22990946
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  22991058 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 22990959  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  22990958 cttttcctgtcaa 22990946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 23006055 - 23005943
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  23006055 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 23005956  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  23005955 cttttcctgtcaa 23005943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 16680295 - 16680429
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  |||||| |||| |||||||||| |||| |||||||    
T  16680295 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaggtcatttaaaaaattgcatctgagtcagtttgagtc 16680394  T
Q  115 attttagtccctaggggcattttggtcttttcctg 149  Q
    | |||||||||||||||||||||||||||||||||    
T  16680395 agtttagtccctaggggcattttggtcttttcctg 16680429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 33785568 - 33785706
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||| ||||  ||||||||||| |||||||||| |||| |||||||    
T  33785568 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 33785667  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  33785668 agtttagtccctaggggcattttggtcttttcctgtcaa 33785706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 22345251 - 22345388
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||| ||||||  || ||||||| |||||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||  ||||||||    
T  22345251 tgtgtttgcctctgggtcttttcaatttgtctgtacaaataattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcaatttgagtca 22345350  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  22345351 gtttagtccctaggggcattttggtcttttcctgtcaa 22345388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 30915347 - 30915206
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa----tcatttcaaaa--ttgcatctgaatcaggttga 111  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||    |||||||||||  |||||||||| | || ||||    
T  30915347 tgtgtttgcctctgagtctttttaacttgtctgtacaaatcactgttgagtctttgtttaaaaaaaatcatttcaaaaaattgcatctgagttagtttga 30915248  T
Q  112 gtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  30915247 gtcagtttagtccctaggggcattttggtcttttcctgtcaa 30915206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 32451922 - 32451785
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcat 116  Q
    |||||||  ||||||| ||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||| ||| |||| ||| ||||     
T  32451922 tgtgtttgcctctgagccttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaattgcatttgagtcagtttgggtcag 32451823  T
Q  117 tttagtcccta-ggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  32451822 tttagtccctagggggcattttggtcttttcctgtcaa 32451785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 11543496 - 11543634
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| ||||||| ||||||| ||| |||||||||  ||||||||||| |||||||||| |||  |||||||    
T  11543496 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcgttgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcaatttgagtc 11543595  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||| ||||    
T  11543596 agtttagtccctaggggcattttggtcttttcctatcaa 11543634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 19866033 - 19865903
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  ||||||| |  ||||||||||||||| ||| |||| |||| ||||||||||| |||||||||| |||| ||||||||    
T  19866033 tgtgtttgtctctgagtcttttcaacttgtttt-acaaatcattgttgagtctttgttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 19865935  T
Q  116 ttttagtccctaggggcattttggtcttttcc 147  Q
     |||||||||||||||||||||||||||||||    
T  19865934 gtttagtccctaggggcattttggtcttttcc 19865903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 33770617 - 33770755
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||| ||||  ||||||||||| || ||||||| |||| |||||||    
T  33770617 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgttaaaaaaatcatttcaaaaattacatctgagtcagtttgagtc 33770716  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  33770717 agtttagtccctaggggcattttggtcttttcctgtcaa 33770755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 34495890 - 34495748
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat------catttcaaaa-ttgcatctgaatcaggttg 110  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||| | ||| |||| ||||       |||||||||| |||||||||| |||| |||    
T  34495890 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttaagtctttgttaaaaaaaaaaaccatttcaaaaattgcatctgagtcagtttg 34495791  T
Q  111 agtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34495790 agtcattttagtccctaggggcattttggtcttttcctgtcaa 34495748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 22443312 - 22443451
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    |||||||  |||||||| |||  |||||||||| || |||||||||||| ||| |||||||||   ||||||||||| ||||| |||| |||| ||||||    
T  22443312 tgtgtttgcctctgagttttttcaacttgtctgtacgaatcattgttgagtctttgtttaaaaaaatcatttcaaaaattgcagctgagtcagtttgagt 22443411  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||| ||||||||||||||||||||||||||||||||    
T  22443412 cagtttattccctaggggcattttggtcttttcctgtcaa 22443451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 24610425 - 24610562
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || |||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||| ||||    
T  24610425 tgtgtttgcctctgagtcttttcaacctgtctgtacgaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagcttgggtca 24610524  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||| |||||||||||||||||||||||||||    
T  24610525 gtttagtccccaggggcattttggtcttttcctgtcaa 24610562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 24945231 - 24945368
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||  |||||  | ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  24945231 tgtgtttgcctctgagtcttttcaaccagtctgtgcgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 24945330  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  24945331 gtttagtccctaggggcattttggtcttttcctgtcaa 24945368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 25193115 - 25193252
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||| ||| ||||||||||||||| ||| ||||||||| |||||| |||| |||||||||| | || ||| ||||    
T  25193115 tgtgtttgcctctgagtcttttcaacttgcctgtacaaatcattgttgagtctttgtttaaaaatcattttaaaaattgcatctgagttagtttgggtca 25193214  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||| ||||||||||||||||||||||    
T  25193215 gtttagtccctagggacattttggtcttttcctgtcaa 25193252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 25208502 - 25208639
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| |||||| |||| |||||||||| | || ||  ||||    
T  25208502 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcattttaaaaattgcatctgagttagtttaggtca 25208601  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      ||||||||||||||||||||||||||||||||||||    
T  25208602 gcttagtccctaggggcattttggtcttttcctgtcaa 25208639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 25272658 - 25272795
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| |||||| |||| |||||||||| | || ||  ||||    
T  25272658 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcattttaaaaattgcatctgagttagtttaggtca 25272757  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      ||||||||||||||||||||||||||||||||||||    
T  25272758 gcttagtccctaggggcattttggtcttttcctgtcaa 25272795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 23734740 - 23734628
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||| | ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  23734740 aacttgtctgtacaaatcatcgttaattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 23734641  T
Q  141 cttttcctgtcaa 153  Q
    ||||||| |||||    
T  23734640 cttttcccgtcaa 23734628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 41299277 - 41299416
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    ||||||||  ||||||||||||  ||| ||| || |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||  | ||||    
T  41299277 atgtgtttgcctctgagtcttttcaacgtgtatgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcaattcgagt 41299376  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||||||||||||||||||||||||||||    
T  41299377 cagtttagtccctaggggcattttggtcttttcctgtcaa 41299416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 15493781 - 15493919
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||| ||||||||||| ||||||| || ||| |||| |||  |||    
T  15493781 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgtatttgagtcagtttggatca 15493880  T
Q  116 ttttagtccct-aggggcattttggtcttttcctgtcaa 153  Q
     ||||||||||  ||||||||||||||||||||||||||    
T  15493881 gtttagtccctggggggcattttggtcttttcctgtcaa 15493919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 22896538 - 22896670
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa---ttgcatctgaatcag-gttgagtcattttag 121  Q
    |||||||||||||  |||||| ||| | || |||||||| ||||| ||||||||||||||||||||   |||||||||| ||||  || ||||| |||||    
T  22896538 tctctgagtcttttcaacttgcctgtataagtcattgttaaatctttgtttaaaatcatttcaaaaaagttgcatctgagtcagttttaagtcaatttag 22896637  T
Q  122 tcccta-ggggcattttggtcttttcctgtcaa 153  Q
    |||||| |||||||||||||||||| |||||||    
T  22896638 tccctagggggcattttggtctttttctgtcaa 22896670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 30927751 - 30927878
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| ||||||||||| |||||||||| ||||             
T  30927751 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcag--------- 30927841  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  30927842 -tttagtccctaggggcattttggtcttttcctgtcaa 30927878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 37297049 - 37296920
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||| |||||||||||||  ||||||| |  |||||||| |||||||||| ||||||||| | ||||||||||||| ||||| ||    |||||||     
T  37297049 tgtgtttgtctctgagtcttttcaacttgtttt-acaaatcactgttgaatctttgtttaaaaaccatttcaaaattgcgtctgagtctatctgagtcag 37296951  T
Q  117 tttagtccctaggggcattttggtcttttcc 147  Q
    |||||||||||||| ||||||||||||||||    
T  37296950 tttagtccctagggacattttggtcttttcc 37296920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 37648552 - 37648680
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa--ttgcatctgaatcaggttgagtc 114  Q
    ||||||| |||||||||||||  || ||||||  ||||||| ||||||| ||| ||||||||| |||||||||||  |||||||||| ||||            
T  37648552 tgtgtttgtctctgagtcttttcaatttgtctatacaaatctttgttgagtctttgtttaaaaatcatttcaaaaaattgcatctgagtcag-------- 37648643  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      |||||||||||||||||||||||||||||||||||||    
T  37648644 --tttagtccctaggggcattttggtcttttcctgtcaa 37648680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 23725108 - 23724989
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtc 123  Q
    ||||||||||||  || ||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| ||||          |||||||    
T  23725108 ctctgagtcttttcaatttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcag----------tttagtc 23725019  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||    
T  23725018 cctaggggcattttggtcttttcctgtcaa 23724989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 24978183 - 24978227
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  24978183 tgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 24978227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 27281611 - 27281655
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  27281611 tgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 27281655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 31584084 - 31584125
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  31584084 tcccaaaattgcattttttgtccaaacagtttttaatttcat 31584125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 42066187 - 42066146
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  42066187 tcccaaaattgcattttttgtccaaacagtttttaatttcat 42066146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 21499179 - 21499217
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  21499179 tgagtcagtttagtccctaggggcattttggtcttttcc 21499217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 29893639 - 29893598
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  29893639 tcccaaaattgcatattttgtccaaacagtttttaatttcat 29893598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 33286168 - 33286205
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatt 275  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  33286168 tcccaaaattgcattttttgtccaaacagtttttaatt 33286205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 33301218 - 33301255
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatt 275  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  33301218 tcccaaaattgcattttttgtccaaacagtttttaatt 33301255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 35398888 - 35398845
Alignment:
Q  110 gagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||| |||||||||||| |||||||| |||||||||||||||    
T  35398888 gagtcagtttagtccctagaggcatttttgtcttttcctgtcaa 35398845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 28900594 - 28900556
Alignment:
Q  112 gtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  28900594 gtcagtttagtccctaggggcattttagtcttttcctgt 28900556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 28936989 - 28936951
Alignment:
Q  112 gtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  28936989 gtcagtttagtccctaggggcattttagtcttttcctgt 28936951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 152
Target Start/End: Original strand, 6176747 - 6176874
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||||||| |||||||||||||    
T  6176747 tctctgagtctttctaacttgtctgtacaaatcattgttgaatctctttttaaaatcatttcaaaaactgcatctgagtcaggttgggtcattttagtcc 6176846  T
Q  125 ctaggggcattttggtcttttcctgtca 152  Q
    ||||||||||||||||||||||||||||    
T  6176847 ctaggggcattttggtcttttcctgtca 6176874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 16034577 - 16034707
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttg--aatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    ||||| |||||||  |||||||||| || |||||||||||  |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  16034577 tctcttagtcttttcaacttgtctgtacgaatcattgttggaaatctctgtttaaaatcatttcaaaaattgcatctgaatcagtttgagtcagtttagt 16034676  T
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||    
T  16034677 ccctaggggcattttggtcttttcctgtcaa 16034707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 16049353 - 16049483
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttg--aatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  |||||||||| || |||||||||||  ||||||| |||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  16049353 tctctgagtcttttcaacttgtctgtacgaatcattgttggaaatctctatttaaaatcatttcaaaaattgcatctgaatcagtttgagtcagtttagt 16049452  T
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||    
T  16049453 ccctaggggcattttggtcttttcctgtcaa 16049483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 13738477 - 13738340
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  13738477 tgtgtttgtctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 13738378  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  13738377 gtttagtccctaggggcattttggtcttttcctgtcaa 13738340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15921076 - 15920936
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa----ttgcatctgaatcaggttgag 112  Q
    |||||||  ||||||||||||  |||||||||| || |||||||||||| ||| ||||||||| |||||||||||    |||||||||| ||||||||||    
T  15921076 tgtgtttgcctctgagtcttttcaacttgtctgtacgaatcattgttgagtctttgtttaaaaatcatttcaaaaatttttgcatctgagtcaggttgag 15920977  T
Q  113 tcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15920976 tcattttagtccctaggggcattttggtcttttcctgtcaa 15920936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 4053030 - 4053156
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||          ||||||||     
T  4053030 tgtgtttgtctctgagtcttttaaacttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaaattgcat----------ttgagtcag 4053119  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  4053120 tttagtccctaggggcattttggtcttttcctgtcaa 4053156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 14227813 - 14227676
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  14227813 tgtgtttgcctctgagtcttttcaacctgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 14227714  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  14227713 gtttagtccctaggggcattttggtcttttcctgtcaa 14227676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 5166626 - 5166763
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  || |||| || ||||||| ||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  5166626 tgtgtttgtctctgagtcttttcaatttgtttgtacaaatctttgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 5166725  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  5166726 gtttagtccctaggggcattttggtcttttcctgtcaa 5166763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 16501066 - 16500929
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  16501066 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 16500967  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  16500966 gtttagtccctaggggcattttggtcttttcctgtcaa 16500929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 16510362 - 16510225
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  16510362 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 16510263  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  16510262 gtttagtccctaggggcattttggtcttttcctgtcaa 16510225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18427772 - 18427909
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  18427772 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 18427871  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  18427872 gtttagtccctaggggcattttggtcttttcctgtcaa 18427909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 2113522 - 2113390
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  2113522 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 2113423  T
Q  116 ttttagtccctaggggcattttggtcttttcct 148  Q
     ||||||| ||||||||||||||||||||||||    
T  2113422 gtttagtctctaggggcattttggtcttttcct 2113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 5804375 - 5804247
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| ||||||||||| |||||||||| |||| |||||||| ||||| ||    
T  5804375 ctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtcatttcaaaaattgcatctgagtcagtttgagtcagtttagccc 5804276  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  5804275 ctaggggcattttggtcttttcctgtcaa 5804247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 23006903 - 23006765
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  23006903 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 23006804  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  23006803 agtttagtccctaggggcattttggtcttttcctgtcaa 23006765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 4184032 - 4184160
Alignment:
Q  28 tctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||| ||||||||    
T  4184032 tctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtcagtttagtcc 4184131  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||||||||||||||||||||||    
T  4184132 ttaggggcattttggtcttttcctgtcaa 4184160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 14932346 - 14932209
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  14932346 tgtgtttgcctctgagtcttttcaacctgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 14932247  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  14932246 gtttagtccctaggggcattttggtcttttcctgtcaa 14932209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15355781 - 15355644
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  15355781 tgtgtttgcctctgagtcttttcaacctgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 15355682  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15355681 gtttagtccctaggggcattttggtcttttcctgtcaa 15355644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 23762753 - 23762884
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat---catttcaaaa-ttgcatctgaatcaggttgagtcattttag 121  Q
    |||||||||||||  |||||||||| |||||| |||||||||||| |||||||||    |||||||||| ||| |||||| |||| |||||||| |||||    
T  23762753 tctctgagtctttttaacttgtctgtacaaattattgttgaatctttgtttaaaaaaaccatttcaaaaattgtatctgagtcagtttgagtcagtttag 23762852  T
Q  122 tccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||    
T  23762853 tccctaggggcattttggtcttttcctgtcaa 23762884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 35969651 - 35969788
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| |||  |||    
T  35969651 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttggatca 35969750  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  35969751 gtttagtccctaggggcattttggtcttttcctgtcaa 35969788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 35991063 - 35991200
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| |||  |||    
T  35991063 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttggatca 35991162  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  35991163 gtttagtccctaggggcattttggtcttttcctgtcaa 35991200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 36881529 - 36881392
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  || |||| || ||||||| ||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||||||||    
T  36881529 tgtgtttgtctctgagtcttttcaatttgtttgtacaaatctttgttgagtctttgtttaaaaaccatttcaaaaattgcatctgagtcagtttgagtca 36881430  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  36881429 gtttagtccctaggggcattttggtcttttcctgtcaa 36881392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 39864546 - 39864409
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||  ||| ||||    
T  39864546 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcaatttgggtca 39864447  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||| ||||||||||||||||||||||||||    
T  39864446 gtttagtccctgggggcattttggtcttttcctgtcaa 39864409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 10924051 - 10923913
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||  |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  10924051 tgtgtttgcctctgagtcttttcaacttgtctatacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtc 10923952  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | ||||||||||||||||||||||||| |||||||||||    
T  10923951 agtttagtccctaggggcattttggtcctttcctgtcaa 10923913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 16525477 - 16525340
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  |||||||| |||  |||||||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||  |||| ||||||||    
T  16525477 tgtgtttgcctctgagtgttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgggtcagtttgagtca 16525378  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  16525377 gtttagtccctaggggcattttggtcttttcctgtcaa 16525340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 18461841 - 18461704
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  |||||||||||   |||||||||| ||||||||||||||| ||| ||||||||| || |||||||| |||||| ||| |||| ||| ||||    
T  18461841 tgtgtttgcctctgagtcttgtcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcgtttcaaaaattgcatttgagtcagtttgtgtca 18461742  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  18461741 gtttagtccctaggggcattttggtcttttcctgtcaa 18461704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 39203826 - 39203687
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa---ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| |||||||||||   |||||||||| ||||  |||||    
T  39203826 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaaaattgcatctgagtcagtctgagt 39203727  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||||||||||||||||||||||||||||    
T  39203726 cagtttagtccctaggggcattttggtcttttcctgtcaa 39203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 39215197 - 39215058
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa---ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| |||||||||||   |||||||||| ||||  |||||    
T  39215197 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaaaattgcatctgagtcagtctgagt 39215098  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||||||||||||||||||||||||||||    
T  39215097 cagtttagtccctaggggcattttggtcttttcctgtcaa 39215058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 10908516 - 10908381
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||| ||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  10908516 tgtgtttgcctctgagtcttttcaacttgcctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtc 10908417  T
Q  115 attttagtccctaggggcattttggtcttttcctgt 150  Q
    | ||||||||||||||||||||||||| ||||||||    
T  10908416 agtttagtccctaggggcattttggtcctttcctgt 10908381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 18135179 - 18135291
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||| | ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  18135179 aacttgtctgtacaaatcatcgttaattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 18135278  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  18135279 cttttcctgtcaa 18135291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 20590353 - 20590493
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtt-----taaaatcatttcaaaattgcatctgaatcaggttgag 112  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||      ||||||||||||||||||||| ||| |||| ||| |    
T  20590353 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgttaaaaaaaaaatcatttcaaaattgcatttgagtcagtttggg 20590452  T
Q  113 tcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  20590453 tcagtttagtccctaggggcattttggtcttttcctgtcaa 20590493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 7367192 - 7367311
Alignment:
Q  24 tatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||||  ||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||          ||||||| |||||||    
T  7367192 tatctctgagtcttttcaacttttctgtacaaatcgttgttgaatctctgtttaaaatcatttcaaaattgcatc----------tgagtcagtttagtc 7367281  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| ||||||||||||||| ||||||    
T  7367282 cctagggacattttggtcttttcttgtcaa 7367311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 30306072 - 30306174
Alignment:
Q  53 caaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  30306072 caaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtctgagtcagtttagtccctaggggcattttggtcttttcctgt 30306171  T
Q  151 caa 153  Q
    |||    
T  30306172 caa 30306174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 2967181 - 2967318
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||  || |||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||| ||||    
T  2967181 tgtgtttgcctctgagtcttttcaacctgtctatacgaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagtttgggtca 2967280  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  2967281 gtttagtccctaggggcattttggtcttttcctgtcaa 2967318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 11358941 - 11359078
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||| ||||  || ||||||  ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||  |||||||    
T  11358941 tgtgtttgcctctgagccttttcaatttgtctatacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtctgagtca 11359040  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||| ||||||||||||||||||||||||||||||||    
T  11359041 gtttaatccctaggggcattttggtcttttcctgtcaa 11359078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 18590821 - 18590684
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||| ||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| |||  ||| ||  ||||    
T  18590821 tgtgtttgcctctgagtcttttcaactggtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgaggcagtttaggtca 18590722  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  18590721 gtttagtccctaggggcattttggtcttttcctgtcaa 18590684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18620864 - 18621001
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||| ||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| |||  ||| ||  ||||    
T  18620864 tgtgtttgcctctgagtcttttcaactggtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgaggcagtttaggtca 18620963  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  18620964 gtttagtccctaggggcattttggtcttttcctgtcaa 18621001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 4546163 - 4546044
Alignment:
Q  29 ctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccct 126  Q
    ||||||||||  ||| |||||| || |||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||| |||| ||||||||||    
T  4546163 ctgagtcttttcaacctgtctgtacgaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgggtcagtttagtccct 4546064  T
Q  127 aggggcattttggtcttttc 146  Q
    ||||||||||||||||||||    
T  4546063 aggggcattttggtcttttc 4546044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 6225137 - 6224999
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    ||||||| |||||||||||||  || ||||||  ||||||||||||||| ||| |||||  ||||||||||||||| |||||||||| || | ||| ||     
T  6225137 tgtgtttgtctctgagtcttttcaatttgtctctacaaatcattgttgagtctttgtttgaaaaatcatttcaaaaattgcatctgagtcggtttgggtt 6225038  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||| ||||||||||||||||||||||||||    
T  6225037 aatttagtccctgggggcattttggtcttttcctgtcaa 6224999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 39148573 - 39148711
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    ||||||||  || |||||||||  |||||||||| |||||||||||||||  || ||||||||| ||||||||||| || ||| ||| |||| ||| |||    
T  39148573 atgtgtttgcctgtgagtcttttcaacttgtctgtacaaatcattgttgagcctttgtttaaaaatcatttcaaaaattacatttgagtcagtttgggtc 39148672  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||| ||||    
T  39148673 agtttagtccctaggggcattttggtcttttcctatcaa 39148711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 11431788 - 11431651
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaat-tgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  || |||| || ||||||| ||||||| ||| ||||||||| | |||||||||  ||||||||| |||| ||| ||||    
T  11431788 tgtgtttgtctctgagtcttttcaatttgtttgtacaaatctttgttgagtctttgtttaaaaattatttcaaaaagtgcatctgagtcagtttgggtca 11431689  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||| ||||||    
T  11431688 gtttagtccctaggggcattttggtcttttcatgtcaa 11431651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 11416784 - 11416647
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaat-tgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  || |||| || ||||||| ||||||| ||| ||| ||||| | |||||||||  ||||||||| |||| ||| ||||    
T  11416784 tgtgtttgtctctgagtcttttcaatttgtttgtacaaatctttgttgagtctttgtgtaaaaattatttcaaaaagtgcatctgagtcagtttgggtca 11416685  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||| ||||||    
T  11416684 gtttagtccctaggggcattttggtcttttcatgtcaa 11416647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 16441986 - 16441921
Alignment:
Q  88 aaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  16441986 aaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 16441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 16456928 - 16456863
Alignment:
Q  88 aaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  16456928 aaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 16456863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 22834888 - 22834751
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| | |||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| | ||||||    
T  22834888 tgtgtttgcctctgagtcttttcaacctatctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagttcgagtca 22834789  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     | |||||||||||||| ||||||||||||||| ||||    
T  22834788 gtctagtccctaggggcgttttggtcttttcctatcaa 22834751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 30243870 - 30243740
Alignment:
Q  24 tatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat--catttcaaaa-ttgcatctgaatcaggttgagtcatttta 120  Q
    |||||||||||||||  ||||||| |  |||||||| |||||| ||| |||||||||   |||| ||||| || ||||||| |||| |||||||| ||||    
T  30243870 tatctctgagtcttttcaacttgtttt-acaaatcactgttgagtctttgtttaaaaaaccattccaaaaattacatctgagtcagtttgagtcagttta 30243772  T
Q  121 gtccctaggggcattttggtcttttcctgtca 152  Q
    ||||||||||||||||||||||||||||||||    
T  30243771 gtccctaggggcattttggtcttttcctgtca 30243740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 2147692 - 2147793
Alignment:
Q  44 ttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtc 141  Q
    ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||          |||||||||||||||||||||||||    
T  2147692 ttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcag----------tttagtccctaggggcattttggtc 2147781  T
Q  142 ttttcctgtcaa 153  Q
    ||||||||||||    
T  2147782 ttttcctgtcaa 2147793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 2162903 - 2163004
Alignment:
Q  44 ttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtc 141  Q
    ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||          |||||||||||||||||||||||||    
T  2162903 ttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcag----------tttagtccctaggggcattttggtc 2162992  T
Q  142 ttttcctgtcaa 153  Q
    ||||||||||||    
T  2162993 ttttcctgtcaa 2163004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 15006868 - 15006824
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  15006868 tgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 15006824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 23833488 - 23833444
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  23833488 tgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 23833444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 7233615 - 7233574
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  7233615 tcccaaaattgcattttttgtccaaacagtttttaatttcat 7233574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 18537349 - 18537390
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  18537349 tcccaaaattgcattttttgtccaaacagtttttaatttcat 18537390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 18547857 - 18547898
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  18547857 tcccaaaattgcattttttgtccaaacagtttttaatttcat 18547898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 39352514 - 39352473
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  39352514 tcccaaaattgcattttttgtccaaacagtttttaatttcat 39352473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 45729184 - 45729225
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  45729184 tcccaaaattgcattttttgtccaaacagtttttaatttcat 45729225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 45740086 - 45740127
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  45740086 tcccaaaattgcattttttgtccaaacagtttttaatttcat 45740127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 5243919 - 5244047
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttc-aaaattgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||  ||||||||||| |||||||||||          ||||||    
T  5243919 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatc----------tgagtc 5244008  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||| ||||||||||||||||||||||||| ||||    
T  5244009 agtttagttcctaggggcattttggtcttttcctatcaa 5244047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 22976120 - 22976156
Alignment:
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  22976120 tttagtccctaggggcattttggtcttttcctgtcaa 22976156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 34192436 - 34192556
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||||||||||||||||  ||||||| |  |||||||| |||||| ||| ||||||||| | ||||||||| |||||||||| ||||             
T  34192436 tgtgtttatctctgagtcttttcaacttgtttt-acaaatcactgttgagtctttgtttaaaaaccatttcaaaaattgcatctgagtcag--------- 34192525  T
Q  116 ttttagtccctaggggcattttggtcttttcc 147  Q
     |||||||||||||||||||||||||||||||    
T  34192526 -tttagtccctaggggcattttggtcttttcc 34192556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 10841587 - 10841549
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  10841587 tgagtcagtttagtccctaggggcattttggtcttttcc 10841549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 13897387 - 13897349
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  13897387 tgagtcagtttagtccctaggggcattttggtcttttcc 13897349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 15851764 - 15851826
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa 80  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| |||||||||    
T  15851764 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaa 15851826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 16160468 - 16160509
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  16160468 tcccaaaatcgcattttttgtccaaacagtttttaatttcat 16160509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 5121376 - 5121509
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttta--aaatcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||||| | || ||| | || |  |||| ||||||||| |||||| ||| |||  | |||||    
T  5121376 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattatcgagtctttattaagaaaataatttcaaaaattgcatttgagtcaattcgagtc 5121475  T
Q  115 attttagtccctaggggcattttggtcttttcct 148  Q
    | | |||||||||||||| |||||||||||||||    
T  5121476 agtctagtccctaggggcgttttggtcttttcct 5121509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 5156327 - 5156460
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttta--aaatcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||||| | || ||| | || |  |||| ||||||||| |||||| ||| |||  | |||||    
T  5156327 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattatcgagtctttattaagaaaataatttcaaaaattgcatttgagtcaattcgagtc 5156426  T
Q  115 attttagtccctaggggcattttggtcttttcct 148  Q
    | | |||||||||||||| |||||||||||||||    
T  5156427 agtctagtccctaggggcgttttggtcttttcct 5156460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 34198336 - 34198298
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  34198336 tgagtcagtttagtccataggggcattttggtcttttcc 34198298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 20323800 - 20323674
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccc 125  Q
    |||||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||||||||| |||||| || |||||||| ||||||||||||||    
T  20323800 tctctgagtctttctaacttgtctgtacaaatcattgtagaatctctttttaaaatcatttcaaaactgcatccgagtcaggttgggtcattttagtccc 20323701  T
Q  126 taggggcattttggtcttttcctgtca 152  Q
    |||||||||||||||||||||||||||    
T  20323700 taggggcattttggtcttttcctgtca 20323674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 5135352 - 5135484
Alignment:
Q  20 tgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaa-tctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattt 118  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||| ||    
T  5135352 tgtttatctctgagtcttttaaacttgtctgtacaaatcattgttgaaatctctgtttaaagtcatttcaaaattgcatctgagtcagtttgagtcagtt 5135451  T
Q  119 tagtccctaggggcattttggtcttttcctgtc 151  Q
    | ||||||||||| |||||||||||||||||||    
T  5135452 ttgtccctaggggtattttggtcttttcctgtc 5135484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 21479210 - 21479347
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  21479210 tgtgtttgtctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 21479309  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||| ||||||    
T  21479310 gtttagtccctaggggcattttggtcttttcttgtcaa 21479347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 31449916 - 31449795
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  ||||||| |  ||||||||||||||||||| |||||||||  ||||||||| |||||||||| ||||||||||||||||||||||    
T  31449916 tctctgagtctttttaacttgtttt-acaaatcattgttgaatctttgtttaaaactatttcaaaaattgcatctgagtcaggttgagtcattttagtcc 31449818  T
Q  125 ctaggggcattttggtcttttcc 147  Q
    |||||||||||||||||||||||    
T  31449817 ctaggggcattttggtcttttcc 31449795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18286828 - 18286965
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||||||||||| || ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  18286828 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgtagagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 18286927  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  18286928 gtttagtccctaggggcattttggtcttttcctgtcaa 18286965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 16403527 - 16403629
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||||||||| ||| |||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  16403527 acaaatcattgttgagtctttgttaaaaagtcatttcaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcctgt 16403626  T
Q  151 caa 153  Q
    |||    
T  16403627 caa 16403629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 24652157 - 24652288
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa----tcatttcaaaa-ttgcatctgaatcaggttgagtcattttag 121  Q
    ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||    ||||||||||| |||||||||| |||| |||||||| |||||    
T  24652157 ctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttag 24652256  T
Q  122 tccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||    
T  24652257 tccctaggggcattttggtcttttcctgtcaa 24652288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 4149743 - 4149607
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  ||||||||||| ||||||||||  ||| |||||||    
T  4149743 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagccagtttgagtc 4149644  T
Q  115 attttagtccctaggggcattttggtcttttcctgtc 151  Q
    | |||||||||||||||||||||||||||||||||||    
T  4149643 agtttagtccctaggggcattttggtcttttcctgtc 4149607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18596021 - 18596158
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| |||  |||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  18596021 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtcttcgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 18596120  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  18596121 gtttagtccctaggggcattttggtcttttcctgtcaa 18596158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 21083847 - 21083984
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| | ||||||    
T  21083847 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagttggagtca 21083946  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  21083947 gtttagtccctaggggcattttggtcttttcctgtcaa 21083984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 14690874 - 14690762
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  14690874 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 14690775  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  14690774 cttttcctgtcaa 14690762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 14701612 - 14701500
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  14701612 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 14701513  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  14701512 cttttcctgtcaa 14701500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 8885191 - 8885053
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  | |||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| | || |||||||    
T  8885191 tgtgtttgcctctgagtctttttagcttgtctgtacaaatcactgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagttagtttgagtc 8885092  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  8885091 agtttagtccctaggggcattttggtcttttcctgtcaa 8885053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 13483518 - 13483380
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat--catttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||||||||||  || |||||||||   |||||||||| |||||||||| |||| ||| |||    
T  13483518 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagactttgtttaaaaaaccatttcaaaaattgcatctgagtcagtttgggtc 13483419  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  13483418 agtttagtccctaggggcattttggtcttttcctgtcaa 13483380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 26795857 - 26795994
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  ||| |||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| |||  |||    
T  26795857 tgtgtttgcctctgagtcttttcaacctgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttggatca 26795956  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  26795957 gtttagtccctaggggcattttggtcttttcctgtcaa 26795994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 14693555 - 14693443
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| ||||| || |||  ||| |||| ||||||||||||||||||||||||    
T  14693555 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatccgagtcaatttgggtcagtttagtccctaggggcattttggt 14693456  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  14693455 cttttcctgtcaa 14693443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 14696237 - 14696125
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| ||||| || |||  ||| |||| ||||||||||||||||||||||||    
T  14696237 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatccgagtcaatttgggtcagtttagtccctaggggcattttggt 14696138  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  14696137 cttttcctgtcaa 14696125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 14698921 - 14698809
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| ||||| || |||  ||| |||| ||||||||||||||||||||||||    
T  14698921 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatccgagtcaatttgggtcagtttagtccctaggggcattttggt 14698822  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  14698821 cttttcctgtcaa 14698809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 21503390 - 21503528
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| | |||||||  ||||||||||| |||||||||| |||  | |||||    
T  21503390 tgtgtttgcctctgagtctttttaatttgtctgtacaaatcattgttgagtctttatttaaaaaatcatttcaaaaattgcatctgagtcaattcgagtc 21503489  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  21503490 agtttagtccctaggggcattttggtcttttcctgtcaa 21503528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 21652704 - 21652610
Alignment:
Q  20 tgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaa-tctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagt 113  Q
    ||||||||||||||||||| |||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||    
T  21652704 tgtttatctctgagtcttttaaacttgtatgtgcaaatcattgttgaaatctctgtttaaaatcatttcaaaattgcatctgagtcagtttgagt 21652610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 21889388 - 21889249
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa--ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  ||| ||||||  | ||| |||||||| ||| |||||||||  |||||||||||  |||||||||| |||| ||||||    
T  21889388 tgtgtttgcctctgagtcttttcaacctgtctgtgcgaattattgttgagtctttgtttaaaaaatcatttcaaaaaattgcatctgagtcagtttgagt 21889289  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||||||||||||||||||||||||||||    
T  21889288 cagtttagtccctaggggcattttggtcttttcctgtcaa 21889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 47665249 - 47665110
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  ||||||||||  | |||  ||||||| ||| |||||||||   ||||||||||| |||||||||| |||| ||||||    
T  47665249 tgtgtttgcctctgagtcttttcaacttgtctgtgcgaatttttgttgagtctttgtttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagt 47665150  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||||||||||||||||||||||||||||    
T  47665149 cagtttagtccctaggggcattttggtcttttcctgtcaa 47665110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 13108609 - 13108503
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||| | ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  13108609 aacttgtctgtacaaatcatcgttaattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 13108510  T
Q  141 cttttcc 147  Q
    |||||||    
T  13108509 cttttcc 13108503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 16228600 - 16228730
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  ||||||| |  |||||| |||||||| ||| |||| |||| ||||||||||| |||||||||| |||| ||||||||    
T  16228600 tgtgtttgtctctgagtcttttcaacttgtttt-acaaattattgttgagtctttgttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 16228698  T
Q  116 ttttagtccctaggggcattttggtcttttcc 147  Q
     |||||||||||||| ||||||||||||||||    
T  16228699 gtttagtccctagggacattttggtcttttcc 16228730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 16200099 - 16199994
Alignment:
Q  53 caaatcattgttgaatctctgtttaaaa-tcatttcaaaatt----gcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||| ||||||||| ||| |||| |||| |||||||||||||    |||||||| |||||||| |||| ||||||||||||||| |||||||||||||||    
T  16200099 caaaccattgttgagtctttgttaaaaaatcatttcaaaattttttgcatctgagtcaggttgggtcagtttagtccctaggggtattttggtcttttcc 16200000  T
Q  148 tgtcaa 153  Q
    ||||||    
T  16199999 tgtcaa 16199994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 20453029 - 20453126
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||||||| |||||| ||| ||||||||| | | ||||||| |||||||||| |||| |||||||| ||||||||||||||||||||| |||||||||    
T  20453029 acaaatcactgttgagtctttgtttaaaaaccagttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttcgtcttttcc 20453126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 20539667 - 20539764
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||||||| |||||| ||| ||||||||| | | ||||||| |||||||||| |||| |||||||| ||||||||||||||||||||| |||||||||    
T  20539667 acaaatcactgttgagtctttgtttaaaaaccagttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttcgtcttttcc 20539764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 20545528 - 20545625
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||||||| |||||| ||| ||||||||| | | ||||||| |||||||||| |||| |||||||| ||||||||||||||||||||| |||||||||    
T  20545528 acaaatcactgttgagtctttgtttaaaaaccagttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttcgtcttttcc 20545625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 15432044 - 15432140
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||| ||||| ||| ||||||||| | ||||||||||||  ||||| |||| ||||||||  |||||||||||||||||||| |||||||||    
T  15432044 acaaatcatcgttgagtctttgtttaaaaaccatttcaaaattgtgtctgagtcagtttgagtcagcttagtccctaggggcattttagtcttttcc 15432140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 16215114 - 16215009
Alignment:
Q  53 caaatcattgttgaatctctgtttaaaa-tcatttcaaaatt----gcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||| ||||||||| ||| |||| |||| |||||||||||||    |||| ||| |||||||| |||| ||||||||||||||| |||||||||||||||    
T  16215114 caaaccattgttgagtctttgttaaaaaatcatttcaaaattttttgcatttgagtcaggttgggtcagtttagtccctaggggtattttggtcttttcc 16215015  T
Q  148 tgtcaa 153  Q
    ||||||    
T  16215014 tgtcaa 16215009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 20468927 - 20469024
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||||||| |||||| ||| ||||||||| | | ||||||| |||||||||| |||| |||||||| |||||||| |||||||| |||||||||||||    
T  20468927 acaaatcactgttgagtctttgtttaaaaaccagttcaaaaattgcatctgagtcagtttgagtcagtttagtccttaggggcagtttggtcttttcc 20469024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 46197277 - 46197207
Alignment:
Q  80 atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtc 151  Q
    ||||||||||| |||||||||| |||| ||  |||||||| |||| ||||||||||||||||||||||||||    
T  46197277 atcatttcaaa-ttgcatctgagtcagtttaggtcattttggtccataggggcattttggtcttttcctgtc 46197207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 28148116 - 28148157
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  28148116 tcccaaaattgcattttttgtccaaacagtttttaatttcat 28148157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 28158591 - 28158632
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  28158591 tcccaaaattgcattttttgtccaaacagtttttaatttcat 28158632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 15818504 - 15818460
Alignment:
Q  103 tcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  15818504 tcagtttgagtcagtttagtccctaggggcattttggtcttttcc 15818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 24928590 - 24928634
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||    
T  24928590 tgagtcagtttagtccctgggggcattttggtcttttcctgtcaa 24928634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 20331078 - 20331043
Alignment:
Q  110 gagtcattttagtccctaggggcattttggtctttt 145  Q
    |||||| |||||||||||||||||||||||||||||    
T  20331078 gagtcagtttagtccctaggggcattttggtctttt 20331043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 16655041 - 16655003
Alignment:
Q  112 gtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  16655041 gtcagtttagtccctaggggcattttagtcttttcctgt 16655003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 37887076 - 37886943
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttta--aaatcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||||| | || ||| | || |  |||| ||||||||| |||||| ||| |||  | |||||    
T  37887076 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattatcgagtctttattaagaaaataatttcaaaaattgcatttgagtcaattcgagtc 37886977  T
Q  115 attttagtccctaggggcattttggtcttttcct 148  Q
    | | |||||||||||||| |||||||||||||||    
T  37886976 agtctagtccctaggggcgttttggtcttttcct 37886943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 20345523 - 20345487
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtctttt 145  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  20345523 tgagtcagtttagtccctaggggcattttagtctttt 20345487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 20345603 - 20345516
Alignment:
Q  20 tgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttc-aaaattgcatctgaatcag 106  Q
    |||||||||||||||||||  ||||||| |  |||||||| |||||| ||| ||||| |||| |||||| |||||||||||||| ||||    
T  20345603 tgtttatctctgagtcttttcaacttgt-tttacaaatcactgttgagtctttgtttaaaaaccatttcaaaaattgcatctgagtcag 20345516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 99051 - 98923
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||||    
T  99051 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaaccatttcaaaaattgcatttgagtcaggttgagtcattttagtcc 98952  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  98951 ctaggggcattttggtcttttcctgtcaa 98923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 12482417 - 12482281
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcat 116  Q
    |||||||  |||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||| |||  |||||| |     
T  12482417 tgtgtttgcctctgagtcttttaaacctgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaaattgcatttgagtcaatttgagttag 12482318  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  12482317 tttagtccctaggggcattttggtcttttcctgtcaa 12482281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 5518811 - 5518674
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  5518811 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 5518712  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  5518711 gtttagtccctaggggcattttggtcttttcctgtcaa 5518674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 553272 - 553410
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa--ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||||||| || ||||||||||||| |||||||||||  |||||||||| |||| |||||||    
T  553272 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgtggagtctctgtttaaaagtcatttcaaaaaattgcatctgagtcagtttgagtc 553371  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  553372 agtttagtccctaggggcattttggtcttttcctgtcaa 553410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 18789038 - 18788900
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  18789038 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtc 18788939  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  18788938 agtttagtccctaggggcattttggtcttttcctgtcaa 18788900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 19652690 - 19652553
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  19652690 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 19652591  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  19652590 gtttagtccctaggggcattttggtcttttcctgtcaa 19652553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 19663345 - 19663208
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| ||| |||| ||| ||||    
T  19663345 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagtcagtttgggtca 19663246  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  19663245 gtttagtccctaggggcattttggtcttttcctgtcaa 19663208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 14027688 - 14027550
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  14027688 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 14027589  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  14027588 agtttagtccctaggggcattttggtcttttcctgtcaa 14027550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 2129220 - 2129082
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||| | ||||||||||||  |||||||||| || |||||||||||| ||| ||||| ||||||||||| |||||||||||||| |||| ||||||||    
T  2129220 tgtgttcacctctgagtcttttcaacttgtctgtacgaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 2129121  T
Q  116 ttttagtccct-aggggcattttggtcttttcctgtcaa 153  Q
     |||||||||| |||||||||||||||||||||||||||    
T  2129120 gtttagtccctaaggggcattttggtcttttcctgtcaa 2129082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 2144390 - 2144252
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||| | ||||||||||||  |||||||||| || |||||||||||| ||| ||||| ||||||||||| |||||||||||||| |||| ||||||||    
T  2144390 tgtgttcacctctgagtcttttcaacttgtctgtacgaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 2144291  T
Q  116 ttttagtccct-aggggcattttggtcttttcctgtcaa 153  Q
     |||||||||| |||||||||||||||||||||||||||    
T  2144290 gtttagtccctaaggggcattttggtcttttcctgtcaa 2144252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 16262191 - 16262330
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    |||||||  |||| |||||||  |||||||||| |||||||| |||||| ||| |||||||||   ||||||||||| |||||||||| |||| ||||||    
T  16262191 tgtgtttgcctctaagtctttttaacttgtctgtacaaatcactgttgagtctttgtttaaaaaaatcatttcaaaaattgcatctgagtcagtttgagt 16262290  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||||||||||||||||||||||||||||    
T  16262291 cagtttagtccctaggggcattttggtcttttcctgtcaa 16262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 19909127 - 19908990
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||| ||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||  |||||||    
T  19909127 tgtgtttgcctctgagccttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaagtcatttcaaaaattgcatctgagtcagtctgagtca 19909028  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  19909027 gtttagtccctaggggcattttggtcttttcctgtcaa 19908990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 30369510 - 30369384
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcat 116  Q
    |||||||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||          ||||||||     
T  30369510 tgtgtttatctctgggtcttttaaacctgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaaattgcat----------ttgagtcag 30369421  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||| ||||    
T  30369420 tttagtccctaggggcattttggtcttttcctatcaa 30369384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 14550591 - 14550729
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| ||||  ||||||    
T  14550591 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcactgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtctgagtc 14550690  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  14550691 agtttagtccctaggggcattttggtcttttcctgtcaa 14550729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 14571415 - 14571553
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| ||||  ||||||    
T  14571415 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcactgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtctgagtc 14571514  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  14571515 agtttagtccctaggggcattttggtcttttcctgtcaa 14571553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 15208084 - 15208222
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| |||  | |||||    
T  15208084 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcaattcgagtc 15208183  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  15208184 agtttagtccctaggggcattttggtcttttcctgtcaa 15208222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 21379619 - 21379477
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa------tcatttcaaaa-ttgcatctgaatcaggttg 110  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| |||||||||      ||||||||||| |||||||||| |||| |||    
T  21379619 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaaaaaaatcatttcaaaaattgcatctgagtcagtttg 21379520  T
Q  111 agtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  21379519 agtcagtttagtccctaggggcattttggtcttttcctgtcaa 21379477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 29034506 - 29034644
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  | |||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| | || |||||||    
T  29034506 tgtgtttgcctctgagtctttttagcttgtctgtacaaatcactgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagttagtttgagtc 29034605  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  29034606 agtttagtccctaggggcattttggtcttttcctgtcaa 29034644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 22141113 - 22141250
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaa-attgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||| ||||||  |||||||||| ||||||||||||||| ||| ||||||||| |||||||||| ||||||| | | |||| ||| ||||    
T  22141113 tgtgtttgcctctgggtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaagattgcatttaagtcagtttgggtca 22141212  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  22141213 gtttagtccctaggggcattttggtcttttcctgtcaa 22141250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 33239993 - 33240113
Alignment:
Q  36 tttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggc 132  Q
    |||| ||| |||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||| ||||||||||||||||    
T  33239993 tttccaacctgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggc 33240092  T
Q  133 attttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||    
T  33240093 attttggtcttttcctgtcaa 33240113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 33250672 - 33250792
Alignment:
Q  36 tttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggc 132  Q
    |||| ||| |||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||| ||||||||||||||||    
T  33250672 tttccaacctgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggc 33250771  T
Q  133 attttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||    
T  33250772 attttggtcttttcctgtcaa 33250792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 40697942 - 40698081
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa---ttgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| |||||||||||   |||||||||| ||||  |||||    
T  40697942 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaaaattgcatctgagtcagtctgagt 40698041  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||||||||||||||||||||||||||||    
T  40698042 cagtttagtccctaggggcattttggtcttttcctgtcaa 40698081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 14361917 - 14361817
Alignment:
Q  53 caaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtca 152  Q
    |||||||||||| ||||||| ||||||||||| |||||||| ||| ||| |||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  14361917 caaatcattgttaaatctctttttaaaatcatctcaaaattacatttgagtcagtttgggtcagtttagtccctaggggcattttggtcttttcctgtca 14361818  T
Q  153 a 153  Q
    |    
T  14361817 a 14361817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 27600931 - 27600794
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||| ||||||||  || ||||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||| ||||    
T  27600931 tgtgtttgcctccgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagtttgggtca 27600832  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||| ||||||    
T  27600831 gtttagtccctaggggcattttggtcttttcatgtcaa 27600794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 27615983 - 27615846
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||| ||||||||  || ||||||| ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||| ||||    
T  27615983 tgtgtttgcctccgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagtttgggtca 27615884  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||| ||||||    
T  27615883 gtttagtccctaggggcattttggtcttttcatgtcaa 27615846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 28260656 - 28260788
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||| ||| || ||| |||||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  28260656 tgtgtttgcctctgagtcttttcaacttgcctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 28260755  T
Q  115 attttagtccctaggggcattttggtcttttcc 147  Q
    | |||||||||||||||||||||||||||||||    
T  28260756 agtttagtccctaggggcattttggtcttttcc 28260788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 18798906 - 18799046
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtt-----taaaatcatttcaaaattgcatctgaatcaggttgag 112  Q
    |||||||  ||||||||||||  || ||||||| ||||||||| ||||| ||| ||||      ||||||||||||||||||||| ||| |||| ||| |    
T  18798906 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcatcgttgagtctttgttaaaaaaaaaatcatttcaaaattgcatttgagtcagtttggg 18799005  T
Q  113 tcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  18799006 tcagtttagtccctaggggcattttggtcttttcctgtcaa 18799046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 3219353 - 3219466
Alignment:
Q  45 tgtctgcacaaatcattgttgaatctctgtttaaaa----tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttgg 139  Q
    |||||| ||||||||||||||| ||| |||||||||    ||||||||||| |||||||||| ||||  ||||||| |||||||||||||||||||||||    
T  3219353 tgtctgtacaaatcattgttgagtctttgtttaaaaaaaatcatttcaaaaattgcatctgagtcagtctgagtcagtttagtccctaggggcattttgg 3219452  T
Q  140 tcttttcctgtcaa 153  Q
    ||||||| ||||||    
T  3219453 tcttttcttgtcaa 3219466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 19696288 - 19696424
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaat--tgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  ||| |||||| || ||| |||||||| ||| ||||||||| |||||||||||   ||| ||||| |||  |||||||    
T  19696288 tgtgtttgcctctgagtcttttcaacctgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaaaatgcgtctgagtcaatttgagtc 19696387  T
Q  115 attttagtccctaggggcattttggtcttttcctgtc 151  Q
     |||||||||||||||||||||||||| |||||||||    
T  19696388 gttttagtccctaggggcattttggtcatttcctgtc 19696424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 16256889 - 16256761
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaattgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  |||||||||||||     || |||    |||||||    
T  16256889 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaatt-----tgcatc----tgagtca 16256799  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||| ||||||||||||||||||||    
T  16256798 gtttagtccctaggggcgttttggtcttttcctgtcaa 16256761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 15016011 - 15016070
Alignment:
Q  88 aaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||||||||||| | |||| |||||||| |||||||||||||||||||||||||||||||    
T  15016011 aaaattgcatctaagtcagtttgagtcagtttagtccctaggggcattttggtcttttcc 15016070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 15321977 - 15322104
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  || |||| || ||||||| || |||| ||| ||||||||| ||||||||||| |||||||||| ||||             
T  15321977 tgtgtttgtctctgagtcttttcaatttgtttgtacaaatctttattgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcag--------- 15322067  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15322068 -tttagtccctaggggcattttggtcttttcctgtcaa 15322104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 15502346 - 15502473
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  || |||| || ||||||| || |||| ||| ||||||||| ||||||||||| |||||||||| ||||             
T  15502346 tgtgtttgtctctgagtcttttcaatttgtttgtacaaatctttattgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcag--------- 15502436  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15502437 -tttagtccctaggggcattttggtcttttcctgtcaa 15502473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 22073019 - 22072917
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||| ||||| ||| ||||||||| | ||||||||||||  ||||| |||| ||||||||  |||||||||||||||||||  ||||||||| ||    
T  22073019 acaaatcatcgttgagtctttgtttaaaaaccatttcaaaattgtgtctgagtcagtttgagtcagcttagtccctaggggcatttaagtcttttcccgt 22072920  T
Q  151 caa 153  Q
    |||    
T  22072919 caa 22072917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 21339561 - 21339516
Alignment:
Q  108 ttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  21339561 ttgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 21339516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 21963373 - 21963466
Alignment:
Q  55 aatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||||| ||||| ||| ||||||||| | ||||||||||||  ||||| |||| ||||||||  |||||||||||||||||||| |||||||||    
T  21963373 aatcatcgttgagtctttgtttaaaaaccatttcaaaattgtgtctgagtcagtttgagtcagcttagtccctaggggcattttagtcttttcc 21963466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 31342026 - 31341896
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt----aaaatcatttc-aaaattgcatctgaatcaggttgag 112  Q
    |||||||  ||||||| ||||| |||||||||| |||||||||||| || ||| | |||    ||||||||||| |||||||||||          ||||    
T  31342026 tgtgtttgcctctgagcctttctaacttgtctgtacaaatcattgtagagtctttttttaaaaaaaatcatttcaaaaattgcatc----------tgag 31341937  T
Q  113 tcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  31341936 tcagtttagtccctaggggcattttggtcttttcctgtcaa 31341896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 28506049 - 28506007
Alignment:
Q  108 ttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  28506049 ttgagtcagtttagtccctaggggcattttggtcttttcctgt 28506007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 3715606 - 3715647
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  3715606 tcccaaaattgcattttttgtccaaacagtttttaatttcat 3715647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 15766994 - 15767035
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  15766994 tcccaaaattgcattttttgtccaaacagtttttaatttcat 15767035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 15777408 - 15777449
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  15777408 tcccaaaattgcattttttgtccaaacagtttttaatttcat 15777449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 147
Target Start/End: Original strand, 25744832 - 25744871
Alignment:
Q  108 ttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  25744832 ttgagtcagtttagtccctaggggcattttggtcttttcc 25744871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 1687479 - 1687521
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtc 151  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  1687479 tgagtcagtttagtccctaggggcattttagtcttttcctgtc 1687521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 9350254 - 9350295
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  9350254 tcccaaaattgcattttttgtccaaaaagtttttaatttcat 9350295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 19664789 - 19664916
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttc--aaaattgcatctgaatcaggttgagtcattttagtc 123  Q
    ||||||||||||  ||| |||||| || ||| |||||||| ||| ||||| |||||||||||  ||||| || ||||| |||  ||||||| ||||||||    
T  19664789 ctctgagtcttttcaacctgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaaatggcgtctgagtcaatttgagtcgttttagtc 19664888  T
Q  124 cct-aggggcattttggtcttttcctgtc 151  Q
    ||| | ||||| ||||||| |||||||||    
T  19664889 cctaangggca-tttggtcatttcctgtc 19664916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 21339648 - 21339586
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa 80  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| |||||||||    
T  21339648 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaa 21339586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 9363538 - 9363575
Alignment:
Q  242 aaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  9363538 aaaattgcattttttgtccaaaaagtttttaatttcat 9363575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 21615 - 21717
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21615 acaaatcattgttgaatctctgtttaaaactatttcaaaaattgcatctgagtcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 21714  T
Q  151 caa 153  Q
    |||    
T  21715 caa 21717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 8329 - 8443
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  8329 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaaccatttcaaaaattgcatctgagtcaggttgagtcattttagtcc 8428  T
Q  125 ctaggggcattttgg 139  Q
    |||||||||||||||    
T  8429 ctaggggcattttgg 8443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 3706 - 3795
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtc 114  Q
    |||||||||||||  |||||||||| |||||||| |||||||||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  3706 tctctgagtctttttaacttgtctgtacaaatcactgttgaatctctgtttaaaaccatttcaaaaattgcatctgagtcaggttgagtc 3795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 20466 - 20602
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcat 116  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||| |||| |||| ||||    
T  20466 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctctgtttaaaaccatttcaaaaattgcatctgagtcagtttgaatcat 20565  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  20566 tttagtccctaagggcattttggtcttttcttgtcaa 20602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 52378 - 52242
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaa-ttgcatctgaatcaggttgagtcat 116  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||||| |||| |||| ||||    
T  52378 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctctgtttaaaaccatttcaaaaattgcatctgagtcagtttgaatcat 52279  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  52278 tttagtccctaagggcattttggtcttttcttgtcaa 52242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 1701 - 1580
Alignment:
Q  23 ttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcattttag 121  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||          |||||||| |||||    
T  1701 ttatctctgagtcttttaaacttgtctgtacaaatcattgttgaatctctgtttaaaatcatttcaaaaattgcat----------ttgagtcagtttag 1612  T
Q  122 tccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||    
T  1611 tccctaggggcattttggtcttttcctgtcaa 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 384334 - 384197
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  384334 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 384235  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  384234 gtttagtccctaggggcattttggtcttttcctgtcaa 384197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 75268 - 75128
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa----ttgcatctgaatcaggttgag 112  Q
    |||||||  ||||||||||||  || ||||||| ||| ||||||||||| ||| ||||||||| | |||||||||    |||||||||| |||| | |||    
T  75268 tgtgtttgcctctgagtcttttcaatttgtctgtacagatcattgttgagtctttgtttaaaaattatttcaaaaaaaattgcatctgagtcagttggag 75169  T
Q  113 tcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||| ||||||||||||||| |||||||||||||||||||||    
T  75168 tcagtttagtccctaggggtattttggtcttttcctgtcaa 75128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 34254 - 34115
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    ||||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| |||| ||| ||    
T  34254 atgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgggt 34155  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || ||||||||| |||||||||||||||||||||||||||    
T  34154 cagtttagtccccaggggcattttggtcttttcctgtcaa 34115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 164528 - 164667
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    ||||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| |||||||||  ||||||||||| |||||||||| |||| ||| ||    
T  164528 atgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgggt 164627  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || ||||||||| |||||||||||||||||||||||||||    
T  164628 cagtttagtccccaggggcattttggtcttttcctgtcaa 164667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 72; Significance: 8e-33; HSPs: 4)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 8022 - 8160
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  8022 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagtc 8121  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||| ||||||||||||||    
T  8122 agtttagtccctaggggcattttgatcttttcctgtcaa 8160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 54113 - 53975
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa--ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||||||| |||||||||||  |||||||||| |||| ||| |||    
T  54113 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaaaaaattgcatctgagtcagtttgggtc 54014  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  54013 agtttagtccctaggggcattttggtcttttcctgtcaa 53975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 23001 - 23137
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  |||||| |||| |||||||||| |||| |||||||    
T  23001 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttaaaaaattgcatctgagtcagtttgagtc 23100  T
Q  115 attttagtccctaggggcattttggtcttttcctgtc 151  Q
    | |||||||||||||| ||||||||||||||||||||    
T  23101 agtttagtccctagggacattttggtcttttcctgtc 23137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 13926 - 13798
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| ||||            
T  13926 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcag-------- 13835  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      |||||||||||||||||||||| ||||||||||||||    
T  13834 --tttagtccctaggggcattttgatcttttcctgtcaa 13798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 14425 - 14315
Alignment:
Q  45 tgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtct 142  Q
    |||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  14425 tgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttggtct 14326  T
Q  143 tttcctgtcaa 153  Q
    |||||||||||    
T  14325 tttcctgtcaa 14315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 3537 - 3401
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatc-atttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| ||||||||| |||  ||||||| |  ||||||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||||||||||||    
T  3537 tgtgtttgtctctgagttttttcaacttgtttt-acaaatcattgttgagtctttgtttaaaaaccatttcaaaaattgcatctgagtcaggttgagtca 3439  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  3438 ttttagtccctagggacattttggtcttttcctgtcaa 3401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 7656 - 7519
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| |||  | ||||||    
T  7656 tgtgtttgcctctgagtctttttaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcaattcgagtca 7557  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  7556 gtttagtccctaggggcattttggtcttttcctgtcaa 7519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 23008 - 22871
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| |||||||||||||||  || ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  23008 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagcctttgtttaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 22909  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||| ||||    
T  22908 gtttagtccctaggggcattttggtcttttcctatcaa 22871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 15856 - 15719
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||| ||||  || ||||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||||||| ||||  |||||||    
T  15856 tgtgtttgcctctgagccttttcaatttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatctgagtcagtctgagtca 15757  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     |||||||||||||||||||||||||||||||||||||    
T  15756 gtttagtccctaggggcattttggtcttttcctgtcaa 15719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 20034 - 20146
Alignment:
Q  41 aacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggt 140  Q
    |||||||||| ||||||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  ||| |||| ||||||||||||||||||||||||    
T  20034 aacttgtctgtacaaatcatcgttgattctttgttaaaaatcatttcaaaatcgcatctgagtcaatttgggtcagtttagtccctaggggcattttggt 20133  T
Q  141 cttttcctgtcaa 153  Q
    |||||||||||||    
T  20134 cttttcctgtcaa 20146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 156388 - 156249
Alignment:
Q  17 atgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    ||||||||  ||||||| ||||  || ||||||| |||||||| |||||| ||| |||||||||  ||||||||||| |||||||||| |||| ||||||    
T  156388 atgtgtttgcctctgagccttttcaatttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcagtttgagt 156289  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    || |||||||||||||||||||||||||||||||||||||    
T  156288 cagtttagtccctaggggcattttggtcttttcctgtcaa 156249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 170566 - 170645
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttcaaaattgcat 97  Q
    |||||||  ||||||||||||  ||  |||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  170566 tgtgtttgcctctgagtcttttcaatctgtctgtacaaatcattgttgaatctctttttaaaatcatttcaaaattgcat 170645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 672 - 798
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtcat 116  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||          |||||||     
T  672 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctctgtttaaaatcatttcaaaaattgcatc----------tgagtcag 761  T
Q  117 tttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  762 tttagtccctaggggcattttggtcttttcctgtcaa 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 4668 - 4806
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa---tcatttcaaaa-ttgcatctgaatcaggttgagt 113  Q
    ||||||| |||||||||||||  || |||| |  ||||||||||||||| ||| |||| ||||   ||||||||||| |||||||| | |||||||||||    
T  4668 tgtgtttgtctctgagtcttttcaatttgtttt-acaaatcattgttgagtctttgttaaaaaaaatcatttcaaaaattgcatctaagtcaggttgagt 4766  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4767 cattttagtccctaggggcattttggtcttttcctgtcaa 4806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 169394 - 169270
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcat 116  Q
    |||||||  ||||||||||||  || ||||||| |||||| |||||||| ||| ||||||||| ||||||||||||||||||||| |||  ||||||||     
T  169394 tgtgtttgcctctgagtcttttcaatttgtctgtacaaataattgttgagtctttgtttaaaaatcatttcaaaattgcatctgagtcaatttgagtcag 169295  T
Q  117 tttagtccctaggggcattttggtc 141  Q
    |||||||||||||||||||||||||    
T  169294 tttagtccctaggggcattttggtc 169270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 13368 - 13238
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  ||||||| |  ||||||||||||||| ||| |||| |||| ||||||||||| |||||||||| |||| ||||||||    
T  13368 tgtgtttgtctctgagtcttttcaacttgtttt-acaaatcattgttgagtctttgttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtca 13270  T
Q  116 ttttagtccctaggggcattttggtcttttcc 147  Q
     |||||||||||||||||||||||||||||||    
T  13269 gtttagtccctaggggcattttggtcttttcc 13238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 147
Target Start/End: Complemental strand, 5702 - 5605
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||||||||| ||| |||| |||| ||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  5702 acaaatcattgttgagtctttgttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcc 5605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 38836 - 38698
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  ||| |||||| || ||| |||||||| ||| |||||||||  ||||||||||| |||||||||| |||| |||||||    
T  38836 tgtgtttgcctctgagtcttttcaacctgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcagtttgagtc 38737  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||| ||||||||||||||||||||    
T  38736 agtttagtccctaggggcgttttggtcttttcctgtcaa 38698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 399 - 297
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaa-atcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    ||||||||||||||| ||| |||||||| | |||||||||||||| ||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  399 acaaatcattgttgagtctttgtttaaagaacatttcaaaattgcgtctgagtcagcttgagtcagtttagtccctaggggcattttagtcttttcctgt 300  T
Q  151 caa 153  Q
    |||    
T  299 caa 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 50268 - 50396
Alignment:
Q  27 ctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtcc 124  Q
    ||||||||||||  ||| |||||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||| |||  ||| |||  ||| ||||||||    
T  50268 ctctgagtcttttcaacctgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaattgcatttgagccagtttggatcagtttagtcc 50367  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||||||||    
T  50368 ctaggggcattttggtcttttcctgtcaa 50396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 13133 - 13235
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||||||||||| || | | |||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  13133 acaaatcattgtggagtatttgttaaaaagtcatttcaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcatttttgtcttttcctgt 13232  T
Q  151 caa 153  Q
    |||    
T  13233 caa 13235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 15473 - 15575
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||||||||||| || | | |||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  15473 acaaatcattgtggagtatttgttaaaaagtcatttcaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcatttttgtcttttcctgt 15572  T
Q  151 caa 153  Q
    |||    
T  15573 caa 15575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 17750 - 17621
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  || ||||||| ||||||| ||||||| ||| | ||| ||||||||||||||| |||||| | | |||| ||| |||| |||||||    
T  17750 tctctgagtcttttcaatttgtctgtacaaatctttgttgagtctttatttgaaaatcatttcaaaagttgcatttaagtcagtttgggtcagtttagtc 17651  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||    
T  17650 cctaggggcattttggtcttttcctgtcaa 17621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 27204 - 27341
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    |||||||  ||||||||||||  || ||||||| || |||||||||||| ||| ||||||||| | ||||||||| |||||||||| |||| ||| ||||    
T  27204 tgtgtttgcctctgagtcttttcaatttgtctgtacgaatcattgttgagtctttgtttaaaaattatttcaaaaattgcatctgagtcagtttgggtca 27303  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||||||| |||||||||||||||| ||||||    
T  27304 gtttagtccctaggagcattttggtcttttcatgtcaa 27341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 507 - 633
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaat---catttcaaaa-ttgcatctgaatcaggttgagtcattttag 121  Q
    |||||||||||||  |||||||||| |||||| |||||||||||| |||||||||    ||||| |||| ||| |||||| |||| || ||||| |||||    
T  507 tctctgagtctttttaacttgtctgtacaaattattgttgaatctttgtttaaaaaaaccatttaaaaaattgtatctgagtcagtttaagtcagtttag 606  T
Q  122 tccctaggggcattttggtcttttcct 148  Q
    |||||||||||||||||||||||||||    
T  607 tccctaggggcattttggtcttttcct 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0354 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 14477 - 14615
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||||| | | |||||||||  ||||||||||| ||| |||||| |||| ||| ||     
T  14477 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttgagtgtttgtttaaaaaatcatttcaaaaattgaatctgagtcagtttgggtt 14576  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||| ||||||||||||||||||||||||||    
T  14577 agtttagtccctcggggcattttggtcttttcctgtcaa 14615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 22638 - 22772
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-----ttgcatctgaatcaggttgagtcattt 118  Q
    |||||||||||||  || ||||||| ||||| ||||||||||||| |||||||||  |||||||||||     |||||||||| ||||  ||||||| ||    
T  22638 tctctgagtcttttcaatttgtctgtacaaaccattgttgaatctttgtttaaaaaatcatttcaaaaaaaaattgcatctgagtcagtctgagtcagtt 22737  T
Q  119 tagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | ||||| |||||||||||||||||||||||||||    
T  22738 tggtccccaggggcattttggtcttttcctgtcaa 22772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 9654 - 9527
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttg-aatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||||||||||||||||||  ||||||| || || ||||||||||| |||||||||||||||||||||| |||||||||||          |||||||    
T  9654 tgtgtttatctctgagtcttttcaacttgtgtgtacgaatcattgttgaaatctctgtttaaaatcatttcaaaaattgcatc----------tgagtca 9565  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||| ||||||||||||||||||| |||||||    
T  9564 gtttagtcccaaggggcattttggtctttttctgtcaa 9527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 74881 - 75008
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttg-aatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||||||||||||||||||  ||||||| || || ||||||||||| |||||||||||||||||||||| |||||||||||          |||||||    
T  74881 tgtgtttatctctgagtcttttcaacttgtgtgtacgaatcattgttgaaatctctgtttaaaatcatttcaaaaattgcatc----------tgagtca 74970  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||| ||||||||||||||||||| |||||||    
T  74971 gtttagtcccaaggggcattttggtctttttctgtcaa 75008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 59176 - 59303
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttg-aatctctgtttaaaatcatttc-aaaattgcatctgaatcaggttgagtca 115  Q
    |||||||||||||||||||||  ||||||| || || ||||||||||| |||||||||||||||||||||| |||||||||||          |||||||    
T  59176 tgtgtttatctctgagtcttttcaacttgtgtgtacgaatcattgttgaaatctctgtttaaaatcatttcaaaaattgcatc----------tgagtca 59265  T
Q  116 ttttagtccctaggggcattttggtcttttcctgtcaa 153  Q
     ||||||||| ||||||||||||||||||| |||||||    
T  59266 gtttagtcccaaggggcattttggtctttttctgtcaa 59303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 96814 - 96942
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  |||||||||| |||||||| |||||| ||| ||| |  |||| |||||||||| |||||||||| ||||  ||||||| ||||||    
T  96814 tctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtctaaaaaaccatttcaaaagttgcatctgagtcagtctgagtcaatttagt 96913  T
Q  123 cccta-ggggcattttggtcttttcctgt 150  Q
    ||||| |||||||||| ||||||||||||    
T  96914 ccctagggggcattttagtcttttcctgt 96942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 177727 - 177855
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt--aaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  |||||||||| |||||||| |||||| ||| ||| |  |||| |||||||||| |||||||||| ||||  ||||||| ||||||    
T  177727 tctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtctaaaaaaccatttcaaaagttgcatctgagtcagtctgagtcaatttagt 177826  T
Q  123 cccta-ggggcattttggtcttttcctgt 150  Q
    ||||| |||||||||| ||||||||||||    
T  177827 ccctagggggcattttagtcttttcctgt 177855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1587 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1587
Description:

Target: scaffold1587; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 208 - 131
Alignment:
Q  77 aaaatcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||| ||||    
T  208 aaaatcatttcaaaaattgcatctgagtcagtttgagtcagtttagtccctaggggcattttggtcttttcctatcaa 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 207817 - 207945
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaa-ttgcatctgaatcaggttgagtcattttagtc 123  Q
    |||||||||||||  ||||||| |  ||||||||||||||| ||| |||  |||| ||||||||||| |||||||| | |||| |||||||| |||||||    
T  207817 tctctgagtcttttcaacttgtttt-acaaatcattgttgagtctttgtaaaaaaatcatttcaaaaattgcatctaagtcagtttgagtcagtttagtc 207915  T
Q  124 cctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||||||||||||||||| |||||    
T  207916 cctaggggcattttggtcttttcccgtcaa 207945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 1561 - 1463
Alignment:
Q  57 tcattgttgaatctctgtttaaaat--catttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||||||| ||| |||||||||   ||||||||||| |||| ||| | || |||||||| |||||||||||||||||||||||||||||||||||||    
T  1561 tcattgttgagtctttgtttaaaaagccatttcaaaatcgcatttgagtaagtttgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 1463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 985 - 1090
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaaaa----ttgcatctgaatcaggttgag 112  Q
    |||||||  ||||||||||||  |||||||||| ||||||||||||||| ||| ||||| |||||||||||||||    |||||||||| ||||||||||    
T  985 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcattgttgagtctttgtttaaaaatcatttcaaaaatttttgcatctgagtcaggttgag 1084  T
Q  113 tcattt 118  Q
    ||||||    
T  1085 tcattt 1090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 15888 - 16017
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaat-tgcatctgaatcaggttgagtcattttagt 122  Q
    |||||||||||||  ||||||| |  ||||||||||||||| ||  |||| ||||  |||||||||||  ||||||||| |||  |||||||| ||||||    
T  15888 tctctgagtcttttcaacttgtttt-acaaatcattgttgagtccttgttaaaaaaatcatttcaaaaagtgcatctgagtcaatttgagtcagtttagt 15986  T
Q  123 ccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||| |||||||||||    
T  15987 ccctaggggcattttggtcctttcctgtcaa 16017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 6226 - 6322
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||| ||||| ||| ||||||||| | ||||||||||||  ||||| |||| ||||||||  |||||||||||||||||||| |||||||||    
T  6226 acaaatcatcgttgagtctttgtttaaaaaccatttcaaaattgtgtctgagtcagtttgagtcagcttagtccctaggggcattttagtcttttcc 6322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 147
Target Start/End: Complemental strand, 14203 - 14107
Alignment:
Q  52 acaaatcattgttgaatctctgtttaaaatc-atttcaaaattgcatctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||||| ||||| ||| ||||||||| | ||||||||||||  ||||| |||| ||||||||  |||||||||||||||||||| |||||||||    
T  14203 acaaatcatcgttgagtctttgtttaaaaaccatttcaaaattgtgtctgagtcagtttgagtcagcttagtccctaggggcattttagtcttttcc 14107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 7360 - 7232
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  ||| |||||| |||||||| |||||| ||| |||||||||  ||||||||||| ||||||          |||||||    
T  7360 tgtgtttgcctctgagtcttttcaacgtgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcat----------ttgagtc 7271  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    | |||||||||||||||||||||||||||||||||||||    
T  7270 agtttagtccctaggggcattttggtcttttcctgtcaa 7232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 115290 - 115162
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttcaaaa-ttgcatctgaatcaggttgagtc 114  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| |||||||||  ||||||||||| |||||||||| ||||            
T  115290 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaaatcatttcaaaaattgcatctgagtcag-------- 115199  T
Q  115 attttagtccctaggggcattttggtcttttcctgtcaa 153  Q
      |||||||||||||||||||||||||||||||||||||    
T  115198 --tttagtccctaggggcattttggtcttttcctgtcaa 115162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 2754 - 2625
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaa---aattgcatctgaatcaggttgagt 113  Q
    |||||||  ||||||||||||  || ||||||| ||||||||||||| | ||| ||||||||| |||||||||   |||||||||||| ||||           
T  2754 tgtgtttgcctctgagtcttttcaatttgtctgtacaaatcattgttaagtctttgtttaaaaatcatttcaagaaaattgcatctgagtcag------- 2662  T
Q  114 cattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
       |||||||||||||||||||||||||||||||||||||    
T  2661 ---tttagtccctaggggcattttggtcttttcctgtcaa 2625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 13588 - 13544
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  13588 tgagtcagtttagtccctaggggcattttggtcttttcctgtcaa 13544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 7846 - 7810
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtctttt 145  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  7846 tgagtcagtttagtccctaggggcattttagtctttt 7810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 7926 - 7839
Alignment:
Q  20 tgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttc-aaaattgcatctgaatcag 106  Q
    |||||||||||||||||||  ||||||| |  |||||||| |||||| ||| ||||| |||| |||||| |||||||||||||| ||||    
T  7926 tgtttatctctgagtcttttcaacttgt-tttacaaatcactgttgagtctttgtttaaaaaccatttcaaaaattgcatctgagtcag 7839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 14962 - 15018
Alignment:
Q  97 tctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||| |||| |||||||| ||||||||||||||||||||| |||||||||||||||    
T  14962 tctgagtcagtttgagtcagtttagtccctaggggcattttagtcttttcctgtcaa 15018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 29479 - 29535
Alignment:
Q  97 tctgaatcaggttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||| |||| |||||||| ||||||||||||| ||||||| |||||||||||||||    
T  29479 tctgagtcagtttgagtcagtttagtccctaggagcattttagtcttttcctgtcaa 29535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 26970 - 27012
Alignment:
Q  108 ttgagtcattttagtccctaggggcattttggtcttttcctgt 150  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  26970 ttgagtcagtttagtccctaggggcattttggtcttttcctgt 27012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1376 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1376
Description:

Target: scaffold1376; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 7 - 52
Alignment:
Q  108 ttgagtcattttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    |||||| | |||||||||||||||||||||||||||||||||||||    
T  7 ttgagttagtttagtccctaggggcattttggtcttttcctgtcaa 52  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 3942 - 3901
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  3942 tcccaaaattgcattttttgtccaaacagtttttaatttcat 3901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 16379 - 16260
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcat 116  Q
    ||||||| |||||||||||||||| ||||| |  ||||||||||||||| ||| |||| |||| ||||||||||| |     ||||||    |||||||     
T  16379 tgtgtttgtctctgagtctttcaa-cttgtttt-acaaatcattgttgagtctttgttaaaaaatcatttcaaaaat-----tgaatc----tgagtcag 16291  T
Q  117 tttagtccctaggggcattttggtcttttcc 147  Q
    |||||||||||||||||||||||||||||||    
T  16290 tttagtccctaggggcattttggtcttttcc 16260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 4563 - 4472
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa--tcatttc-aaaattgcatctgaatcag 106  Q
    |||||||  ||||||||||||  |||||||||| |||||||| |||||| ||| |||||||||  ||||||| |||||||||||||| ||||    
T  4563 tgtgtttgcctctgagtcttttcaacttgtctgtacaaatcactgttgagtctttgtttaaaaagtcatttcaaaaattgcatctgagtcag 4472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 35153 - 35118
Alignment:
Q  118 ttagtccctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||||||||||||||||||||||||||    
T  35153 ttagtccctaggggcattttggtcttttcctgtcaa 35118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 20618 - 20656
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  20618 tgagtcagtttagtccctaggggcattttggtcttttcc 20656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 24397 - 24435
Alignment:
Q  109 tgagtcattttagtccctaggggcattttggtcttttcc 147  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  24397 tgagtcagtttagtccctaggggcattttggtcttttcc 24435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 14135 - 14252
Alignment:
Q  26 tctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtttaaaa-tcatttcaaaattgcatctgaatcaggttgagtcattttagtcc 124  Q
    |||||||||||||  |||||| ||  |||||||||||| || ||| |||| |||| ||||||||||||||||||||| ||||          ||||||||    
T  14135 tctctgagtcttttcaacttg-ctttacaaatcattgtggagtctttgttaaaaagtcatttcaaaattgcatctgagtcag----------tttagtcc 14223  T
Q  125 ctaggggcattttggtcttttcctgtcaa 153  Q
    ||||||||||||| |||||||||| ||||    
T  14224 ctaggggcatttttgtcttttcctatcaa 14252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1658 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1658
Description:

Target: scaffold1658; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 183 - 290
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgtt-taaaatcatttcaaaa-ttgcatctgaatcaggttgagtca 115  Q
    ||||||| |||||||||||||  ||||||| |  |||||||||||| || ||| ||||  ||||||||||||||| |||||||||  |||| ||||||||    
T  183 tgtgtttgtctctgagtcttttcaacttgt-tttacaaatcattgtcgagtctttgttaaaaaatcatttcaaaatttgcatctgggtcagtttgagtca 281  T
Q  116 ttttagtcc 124  Q
     ||||||||    
T  282 gtttagtcc 290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 26948 - 26874
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaaaa 91  Q
    |||||||  ||||||||||||  ||| |||||| || |||||||||||| ||| ||||| |||||||||||||||    
T  26948 tgtgtttgcctctgagtcttttcaacctgtctgtacgaatcattgttgagtctttgtttaaaaatcatttcaaaa 26874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 14714 - 14755
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||| |||||| |||| ||||||||||||||||||||||    
T  14714 tcccaaagttgcatattttgtccaaacagtttttaatttcat 14755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 2662 - 2593
Alignment:
Q  88 aaaattgcatctgaatcaggttgagt-ca-ttttagtccctagggg-catttt-ggtcttttcctgtcaa 153  Q
    |||||||||||||| |||| |||||| || |||||||||||||||| |||||| ||||||||||||||||    
T  2662 aaaattgcatctgagtcagtttgagttcagttttagtccctagggggcatttttggtcttttcctgtcaa 2593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 85901 - 85942
Alignment:
Q  238 tcccaaaattgcattttttatccaaacagtttttaatttcat 279  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  85901 tcccaaaatcgcattttttgtccaaacggtttttaatttcat 85942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 10970 - 11042
Alignment:
Q  18 tgtgtttatctctgagtctttcaaacttgtctgcacaaatcattgttgaatctctgttt-aaaatcatttcaa 89  Q
    |||||||  ||||||||||||  |||||||||| || ||| |||||||| ||| ||||| |||||||||||||    
T  10970 tgtgtttgcctctgagtcttttcaacttgtctgtacgaattattgttgagtctttgtttaaaaatcatttcaa 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University