View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16692_low_9 (Length: 293)

Name: NF16692_low_9
Description: NF16692
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16692_low_9
NF16692_low_9
[»] chr6 (6 HSPs)
chr6 (155-282)||(5684830-5684957)
chr6 (20-159)||(5693760-5693890)
chr6 (69-159)||(17095983-17096073)
chr6 (59-159)||(27753070-27753170)
chr6 (90-159)||(29465258-29465327)
chr6 (69-134)||(6812094-6812159)
[»] chr8 (6 HSPs)
chr8 (64-159)||(5423512-5423607)
chr8 (55-122)||(1581514-1581581)
chr8 (59-159)||(7177021-7177121)
chr8 (55-159)||(14523131-14523235)
chr8 (86-159)||(11767784-11767857)
chr8 (59-124)||(11989712-11989777)
[»] chr3 (10 HSPs)
chr3 (20-134)||(30732955-30733069)
chr3 (61-159)||(25701516-25701614)
chr3 (55-152)||(19611174-19611271)
chr3 (54-152)||(13778206-13778304)
chr3 (20-159)||(38585929-38586068)
chr3 (73-159)||(1294572-1294658)
chr3 (55-157)||(55222426-55222528)
chr3 (93-152)||(40243108-40243167)
chr3 (90-124)||(48098405-48098439)
chr3 (90-159)||(5992162-5992231)
[»] chr2 (4 HSPs)
chr2 (20-159)||(39446313-39446450)
chr2 (55-126)||(12184760-12184830)
chr2 (94-152)||(25749847-25749905)
chr2 (59-159)||(21848188-21848288)
[»] chr1 (9 HSPs)
chr1 (20-124)||(39092932-39093036)
chr1 (55-159)||(49650144-49650248)
chr1 (55-159)||(26991735-26991839)
chr1 (55-159)||(30627094-30627198)
chr1 (90-152)||(28522846-28522908)
chr1 (69-159)||(46688719-46688809)
chr1 (20-97)||(15456889-15456966)
chr1 (55-159)||(35718796-35718900)
chr1 (94-152)||(15457355-15457413)
[»] chr4 (11 HSPs)
chr4 (55-159)||(51175551-51175655)
chr4 (55-152)||(12191549-12191647)
chr4 (55-157)||(44991729-44991831)
chr4 (66-159)||(39720246-39720339)
chr4 (68-150)||(38068553-38068635)
chr4 (67-148)||(13678594-13678675)
chr4 (66-151)||(45832099-45832184)
chr4 (59-152)||(53096248-53096341)
chr4 (59-157)||(27064416-27064514)
chr4 (69-159)||(38068129-38068219)
chr4 (66-151)||(56397059-56397144)
[»] chr7 (11 HSPs)
chr7 (56-159)||(2842588-2842691)
chr7 (55-159)||(584095-584199)
chr7 (55-151)||(8488681-8488777)
chr7 (69-159)||(17503205-17503295)
chr7 (69-159)||(17549919-17550009)
chr7 (55-151)||(44592125-44592221)
chr7 (67-148)||(1837800-1837881)
chr7 (59-159)||(48767877-48767977)
chr7 (59-113)||(8352683-8352737)
chr7 (93-159)||(43788592-43788658)
chr7 (55-151)||(8515514-8515610)
[»] chr5 (6 HSPs)
chr5 (66-152)||(565391-565477)
chr5 (66-159)||(15958699-15958792)
chr5 (59-152)||(4898222-4898316)
chr5 (55-159)||(8516886-8516990)
chr5 (65-159)||(31046350-31046444)
chr5 (59-159)||(31066292-31066392)


Alignment Details
Target: chr6 (Bit Score: 124; Significance: 8e-64; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 155 - 282
Target Start/End: Original strand, 5684830 - 5684957
Alignment:
Q  155 ataaagtacctaatgaagttgaagatttcttcttttttcctccaaaccctttttatccaccacctattatccctaatccacttcaacctccacctttgat 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5684830 ataaagtacctaatgaagttgaagatttcttcttttttcctccaaaccctttttttccaccacctattatccctaatccacttcaacctccacctttgat 5684929  T
Q  255 tcctaaccctttgcaaccaccacctttg 282  Q
    ||||||||||||||||||||||||||||    
T  5684930 tcctaaccctttgcaaccaccacctttg 5684957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 5693760 - 5693890
Alignment:
Q  20 ctttaaatttgagtcgttattagtgggacatatttaagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtc 119  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||         ||     
T  5693760 ctttaaatttgagtcgttattagtgtgacatatttaagatagtgagatatatttaagtacttttaatttaagtccttattaatgtatt---------gtt 5693850  T
Q  120 attgagttattaatatggactttcattaaaaaactataaa 159  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  5693851 attgagttattaatatgtactttcattaaaaaattataaa 5693890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 17096073 - 17095983
Alignment:
Q  69 tatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    ||||||||| |||||  ||||||||||||||| |||||||||||| ||||||| || |  |||||| | ||||| ||||||||| ||||||    
T  17096073 tatttaagtacttttcattgaagtccttattagtgtattgtcattggagtcatagaatccttaataggtacttttattaaaaaattataaa 17095983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 27753170 - 27753070
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataa 158  Q
    ||||| ||| ||||||||| |||||  ||  ||||||||||| ||||||| ||||||||||||||| |  |||||| | ||||| ||||||||| |||||    
T  27753170 tagtgggacttatttaagtacttttcatttgagtccttattagtgtattgacatttgagtcattgaatccttaataggtacttttattaaaaaattataa 27753071  T
Q  159 a 159  Q
    |    
T  27753070 a 27753070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 29465327 - 29465258
Alignment:
Q  90 agtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||| |||||| || ||||||||||||||||||||||  |||||||  ||||||||||||| | ||||||    
T  29465327 agtcattattagtgaattgtcatttgagtcattgagtccttaatataaactttcattaaaatattataaa 29465258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 6812094 - 6812159
Alignment:
Q  69 tatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaata 134  Q
    ||||||||| |||||  ||| |||| |||||| ||||||| |||| ||||||||||||| ||||||    
T  6812094 tatttaagtacttttcattggagtctttattagtgtattgccattggagtcattgagttcttaata 6812159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 5423512 - 5423607
Alignment:
Q  64 agacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||||||||||||| |||||  ||||||||||||||| |||||||||||| |||||||||||| ||||||||| ||||| ||||||||| ||||||    
T  5423512 agacatatttaagtacttttcattgaagtccttattagtgtattgtcattggagtcattgagtcattaatatgtacttttattaaaaaattataaa 5423607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 1581514 - 1581581
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcatt 122  Q
    ||||||||| ||||||||||||| |||||  ||| |||||||||||||||||||||||| ||||||||    
T  1581514 aagatagtgggacatatttaagtacttttcattggagtccttattaatgtattgtcattcgagtcatt 1581581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 7177121 - 7177021
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataa 158  Q
    ||||| ||| ||||||||| |||||  ||| || |||||||| |||||||||||| ||||||||||||  ||||||   ||||||||||||||| |||||    
T  7177121 tagtgggacttatttaagtacttttcattggagcccttattagtgtattgtcattggagtcattgagtccttaatagatactttcattaaaaaattataa 7177022  T
Q  159 a 159  Q
    |    
T  7177021 a 7177021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 14523235 - 14523131
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    |||||||||  |||||||||||| |||||   || ||||||||||| ||||||||||||  |||||||||||| ||||||   ||||| ||||||||| |    
T  14523235 aagatagtggaacatatttaagtacttttcagtggagtccttattagtgtattgtcattgaagtcattgagttcttaataactacttttattaaaaaatt 14523136  T
Q  155 ataaa 159  Q
    |||||    
T  14523135 ataaa 14523131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 11767857 - 11767784
Alignment:
Q  86 ttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    ||||||||| | ||| |||||||||||| | ||||||||||  |||||||| | ||| ||||||||| ||||||    
T  11767857 ttgaagtccctgttagtgtattgtcattggtgtcattgagtacttaatatgaatttttattaaaaaaatataaa 11767784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 11989777 - 11989712
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattga 124  Q
    ||||||||||||||||||  |||||  ||| ||||| | ||| |||||||||||| ||||||||||    
T  11989777 tagtgagacatatttaagcacttttcattggagtccatgttagtgtattgtcattggagtcattga 11989712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 30733069 - 30732955
Alignment:
Q  20 ctttaaatttgagtcgttattagtgggacatatttaagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtc 119  Q
    ||||||||| || || || |||||||||| |||||||| || |||||||||||||| | |||||| ||| | |||||||||||||||||||||| |||||    
T  30733069 ctttaaattggaatccttgttagtgggacctatttaagttaatgagacatatttaactacttttaattggaatccttattaatgtattgtcattggagtc 30732970  T
Q  120 attgagttattaata 134  Q
    |||||||| ||||||    
T  30732969 attgagttcttaata 30732955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 25701614 - 25701516
Alignment:
Q  61 gtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    ||||||| ||||||||| |||||| ||||||| ||||||| |||||||||||| ||||| |||| |  |||||| | ||||||||||||||| ||||||    
T  25701614 gtgagacttatttaagtacttttaattgaagttcttattagtgtattgtcattggagtctttgaatccttaataggtactttcattaaaaaattataaa 25701516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 19611174 - 19611271
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaa 152  Q
    ||||||||| ||||||||||||| |||||  ||||| | ||||||| |||||||||||| ||||||||||||  |||||| | ||||| |||||||||    
T  19611174 aagatagtgggacatatttaagtacttttcattgaatttcttattagtgtattgtcattggagtcattgagtccttaataggtacttttattaaaaaa 19611271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 13778206 - 13778304
Alignment:
Q  54 taagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaa 152  Q
    |||| ||||||||||||||||||  |||||  ||| |||| || |||||||||||||||| ||||||||||||  |||||||| ||||| ||| |||||    
T  13778206 taagttagtgagacatatttaagcacttttcattggagtctttgttaatgtattgtcattagagtcattgagtccttaatatgaacttttattgaaaaa 13778304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 38585929 - 38586068
Alignment:
Q  20 ctttaaatttgagtcgttattagtgggacatatttaagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtc 119  Q
    |||| |||||||||| ||||||||   ||||||||||| | |||  || |||||||||   |||  ||| |||| |||||| |||||||||||| |||||    
T  38585929 cttttaatttgagtccttattagtaaaacatatttaagctggtggaacctatttaagtatatttgattggagtctttattagtgtattgtcattggagtc 38586028  T
Q  120 attgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||||||  ||||||   ||||||||||||||| ||||||    
T  38586029 attgagtccttaatagctactttcattaaaaaattataaa 38586068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 1294572 - 1294658
Alignment:
Q  73 taagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    ||||| |||||  ||| ||||||||||| |||||||||||| ||| ||||||||  |||||||| ||||| ||||||||| ||||||    
T  1294572 taagtacttttcattggagtccttattagtgtattgtcattggagacattgagtccttaatatgtacttttattaaaaaattataaa 1294658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 55222426 - 55222528
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    |||||||||||||||||||||||  ||||  ||| |||  |||||| |||||||||||| ||||||||||||  |||| | | ||||| ||||||||| |    
T  55222426 aagatagtgagacatatttaagtaattttcattggagtatttattagtgtattgtcattggagtcattgagtccttaacaagtacttttattaaaaaatt 55222525  T
Q  155 ata 157  Q
    |||    
T  55222526 ata 55222528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 40243108 - 40243167
Alignment:
Q  93 ccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaa 152  Q
    |||||||| |||||||||||| |||||||||| | ||||| ||  |||||||||||||||    
T  40243108 ccttattagtgtattgtcattagagtcattgaatcattaaaatatactttcattaaaaaa 40243167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 48098405 - 48098439
Alignment:
Q  90 agtccttattaatgtattgtcatttgagtcattga 124  Q
    |||||||||||||||||||||||| ||||||||||    
T  48098405 agtccttattaatgtattgtcattggagtcattga 48098439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 5992231 - 5992162
Alignment:
Q  90 agtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    ||||||||||| ||||||||||||  |||||||||||  ||||||   ||||| ||||||||| ||||||    
T  5992231 agtccttattagtgtattgtcattgaagtcattgagtccttaataaatacttttattaaaaaattataaa 5992162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 39446313 - 39446450
Alignment:
Q  20 ctttaaatttgagtcgttattagtgggacatatttaagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtc 119  Q
    ||||||||| | ||| ||||||||||||| |||||||| |||||  |||||||||||| |||||| ||| ||||||||  | |||||||||||| |||||    
T  39446313 ctttaaattggggtccttattagtgggacttatttaagttagtggaacatatttaagtacttttaattggagtcctta--agtgtattgtcattggagtc 39446410  T
Q  120 attgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||||||  |||||| | | ||||||||||||| ||||||    
T  39446411 attgagtccttaataagtattttcattaaaaaattataaa 39446450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 12184760 - 12184830
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagt 126  Q
    ||||||||| ||||||||||||| |||||  ||||| |  |||||| |||||||||||| ||||||||||||    
T  12184760 aagatagtgggacatatttaagtacttttcattgaaatt-ttattagtgtattgtcattggagtcattgagt 12184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 25749905 - 25749847
Alignment:
Q  94 cttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaa 152  Q
    ||||||| ||||||| |||| ||||||||||||  |||| ||| |||||||||||||||    
T  25749905 cttattagtgtattgccattggagtcattgagtccttaacatgtactttcattaaaaaa 25749847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 21848288 - 21848188
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataa 158  Q
    ||||| ||| ||||||||| |||||  ||| |||| | |||| |||||| ||||| ||||||||||||  |||||| | | ||| ||||||||| |||||    
T  21848288 tagtgggacctatttaagtactttttattggagtcttgattagtgtattttcattggagtcattgagtccttaataagtatttttattaaaaaattataa 21848189  T
Q  159 a 159  Q
    |    
T  21848188 a 21848188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 39092932 - 39093036
Alignment:
Q  20 ctttaaatttgagtcgttattagtgggacatatttaagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtc 119  Q
    ||||||||| ||||  ||||||||| ||| |||||||| ||||| ||||||||||||| |||||| ||| ||||||||||| |||||||||||| |||||    
T  39092932 ctttaaattagagttcttattagtgtgacctatttaagttagtgggacatatttaagtacttttaattggagtccttattattgtattgtcattggagtc 39093031  T
Q  120 attga 124  Q
    |||||    
T  39093032 attga 39093036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 49650144 - 49650248
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    ||||||||||||||||||||||| |||||  ||| |||||||||||||||||||| ||| ||||||||||||  |||||| | ||||| ||||||||| |    
T  49650144 aagatagtgagacatatttaagtacttttcattggagtccttattaatgtattgttattggagtcattgagtccttaataagtacttttattaaaaaatt 49650243  T
Q  155 ataaa 159  Q
    |||||    
T  49650244 ataaa 49650248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 26991839 - 26991735
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    ||||||||||||||||||||||| |||||  ||| ||||||||||| |||||||| ||| ||||||||||||  |||||  | ||||| ||||||||| |    
T  26991839 aagatagtgagacatatttaagtacttttcattggagtccttattagtgtattgttattggagtcattgagtccttaatgggtacttttattaaaaaatt 26991740  T
Q  155 ataaa 159  Q
    |||||    
T  26991739 ataaa 26991735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 30627198 - 30627094
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    ||||||||| |||||||||||||  ||||  ||  |||| ||||||||||||||||||| |||||||| |||  |||||| | ||||| ||||||||| |    
T  30627198 aagatagtgggacatatttaagtatttttcatttgagtctttattaatgtattgtcattggagtcattaagtccttaataggtacttttattaaaaaatt 30627099  T
Q  155 ataaa 159  Q
    |||||    
T  30627098 ataaa 30627094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 28522908 - 28522846
Alignment:
Q  90 agtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaa 152  Q
    ||||||||||| |||||||||||| ||||||||||||  |||||||| ||||| |||||||||    
T  28522908 agtccttattagtgtattgtcattggagtcattgagtccttaatatgtacttttattaaaaaa 28522846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 46688809 - 46688719
Alignment:
Q  69 tatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    ||||||||| |||||  ||| |||| |||||| |||||||||||| |||||||||| | |||||||   ||||| ||||||||| ||||||    
T  46688809 tatttaagtacttttcattggagtcattattagtgtattgtcattggagtcattgaatcattaatagatacttttattaaaaaattataaa 46688719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 15456889 - 15456966
Alignment:
Q  20 ctttaaatttgagtcgttattagtgggacatatttaagatagtgagacatatttaagtgcttttagttgaagtcctta 97  Q
    ||||||||| ||||| |||||| || ||| |||||||| ||||| |||||||||||||  ||||| ||| ||||||||    
T  15456889 ctttaaattggagtccttattattgtgacctatttaagttagtgtgacatatttaagtatttttaattggagtcctta 15456966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 35718900 - 35718796
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    ||||||||||||||||||||||| |||||  |||  |||||| ||| ||||||| |||| |||||||| |||  ||||||   | ||| ||||||||| |    
T  35718900 aagatagtgagacatatttaagtacttttcattggggtccttgttagtgtattgccattggagtcattaagtccttaatagatatttttattaaaaaatt 35718801  T
Q  155 ataaa 159  Q
    |||||    
T  35718800 ataaa 35718796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 15457355 - 15457413
Alignment:
Q  94 cttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaa 152  Q
    ||||||| |||||||||||| || |||| ||||| |||||||| |||| ||||||||||    
T  15457355 cttattagtgtattgtcattggaatcatcgagtttttaatatgtacttacattaaaaaa 15457413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 51175551 - 51175655
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    ||||||||| |||||||||||||  ||| | ||| ||||||||||||||||||| |||| ||||||||||||  |||||| | ||||| ||||||||| |    
T  51175551 aagatagtgggacatatttaagtattttgaattggagtccttattaatgtattgccattggagtcattgagtccttaataggtacttttattaaaaaatt 51175650  T
Q  155 ataaa 159  Q
    |||||    
T  51175651 ataaa 51175655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 12191549 - 12191647
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagt-tattaatatggactttcattaaaaaa 152  Q
    |||||||||||||||||||||||  ||||  ||| ||||||||||| |||||||||||| |||||||||||| | |||||| | ||||| |||||||||    
T  12191549 aagatagtgagacatatttaagtatttttcattggagtccttattagtgtattgtcattggagtcattgagtcttttaataagtacttttattaaaaaa 12191647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 44991831 - 44991729
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    ||||||||| |||||||||||||  ||||  ||| ||||||||||| ||||||| |||| ||||||||||||  |||||| | ||||| ||||||||| |    
T  44991831 aagatagtgggacatatttaagtatttttcattggagtccttattagtgtattgccattggagtcattgagtccttaataggtacttttattaaaaaatt 44991732  T
Q  155 ata 157  Q
    |||    
T  44991731 ata 44991729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 39720246 - 39720339
Alignment:
Q  66 acatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||||||||||| |||||| ||| |||| |||||| |||||||| |||  |||||||||||| |||||| | ||||| ||||||||| ||||||    
T  39720246 acatatttaagtacttttaattggagtcattattagtgtattgtgattgaagtcattgagttcttaataggtacttttattaaaaaattataaa 39720339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 38068553 - 38068635
Alignment:
Q  68 atatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaa 150  Q
    |||||||||| |||||  ||| ||||||||||| |||||||||||| ||||||||||||  |||||| | ||||| |||||||    
T  38068553 atatttaagtacttttctttggagtccttattagtgtattgtcattagagtcattgagtccttaataggtacttttattaaaa 38068635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 13678675 - 13678594
Alignment:
Q  67 catatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaa 148  Q
    ||||||||||| |||||  ||  ||||||||||| |||||||||||| ||||||||||||  |||||| | ||||| |||||    
T  13678675 catatttaagtacttttcatttgagtccttattagtgtattgtcattggagtcattgagtctttaataagtacttttattaa 13678594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 45832184 - 45832099
Alignment:
Q  66 acatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaa 151  Q
    |||||||||||| | |||  ||| ||||||||||| ||||||| |||| |||| |||||||| |||||| | ||||| ||||||||    
T  45832184 acatatttaagtacctttcattggagtccttattagtgtattgccattggagtgattgagttcttaataagtacttttattaaaaa 45832099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 53096248 - 53096341
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaa 152  Q
    ||||| |||||||| |||| | |||| ||  |||| |||||| ||||||||| || ||||||||||||  |||||||| | |||||||||||||    
T  53096248 tagtgggacatattcaagtacgtttaattcgagtctttattagtgtattgtcgttagagtcattgagtccttaatatgtaatttcattaaaaaa 53096341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 27064514 - 27064416
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactata 157  Q
    |||||||||||||||||    ||||  ||| ||||| ||||| |||||||||||| |||||||||| || ||||||   ||||| ||||||||| ||||    
T  27064514 tagtgagacatatttaaacagtttttattggagtccctattagtgtattgtcattagagtcattgaattcttaataaaaacttttattaaaaaattata 27064416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 38068129 - 38068219
Alignment:
Q  69 tatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    ||||||||| |||||  ||| ||||||||||| |||| | ||||| ||| |||||||| ||||||||| | ||| ||||||| | ||||||    
T  38068129 tatttaagtactttttattggagtccttattagtgtactctcattggagccattgagtcattaatatgtatttttattaaaatattataaa 38068219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 56397144 - 56397059
Alignment:
Q  66 acatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaa 151  Q
    ||||||||||||  ||||  ||||||||||||||   ||||||||||| |||||||| | |  |||||| | ||||||||||||||    
T  56397144 acatatttaagtatttttcattgaagtccttattcgcgtattgtcattggagtcattaaatccttaataggtactttcattaaaaa 56397059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 2842588 - 2842691
Alignment:
Q  56 agatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaacta 155  Q
    |||||||| ||||||||||| |  ||||  ||| ||||||||||| |||||||||||| ||||||||||||  |||||||| ||||| ||||||| | ||    
T  2842588 agatagtgggacatatttaaatatttttcattggagtccttattagtgtattgtcattggagtcattgagtccttaatatgtacttttattaaaatatta 2842687  T
Q  156 taaa 159  Q
    ||||    
T  2842688 taaa 2842691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 584095 - 584199
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    ||||||||||||||||||||||| |||||  ||| |||| || ||| ||||||| |||| ||||||||||||  ||||||   ||||| ||||||||| |    
T  584095 aagatagtgagacatatttaagtacttttcattggagtctttgttagtgtattgccattggagtcattgagtccttaatagatacttttattaaaaaatt 584194  T
Q  155 ataaa 159  Q
    |||||    
T  584195 ataaa 584199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 8488777 - 8488681
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaa 151  Q
    ||||||||| |||||||||||||  ||||  ||||||||||||||| ||||||| |||| |||||||||| |  |||||| | ||||| ||||||||    
T  8488777 aagatagtgggacatatttaagtattttttattgaagtccttattagtgtattgccattggagtcattgaatccttaataggtacttttattaaaaa 8488681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 17503295 - 17503205
Alignment:
Q  69 tatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||||||||  ||||  ||| ||||||||||| |||||||||||| |||||||||| |  |||||||| | ||||||||||||| ||||||    
T  17503295 tatttaagtattttttattggagtccttattagtgtattgtcattggagtcattgaatccttaatatgtaatttcattaaaaaattataaa 17503205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 17549919 - 17550009
Alignment:
Q  69 tatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||||||||  ||||  ||| ||||||||||| |||||||||||| |||||||||| |  |||||||| | ||||||||||||| ||||||    
T  17549919 tatttaagtattttttattggagtccttattagtgtattgtcattggagtcattgaatccttaatatgtaatttcattaaaaaattataaa 17550009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 44592125 - 44592221
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaa 151  Q
    |||||| || ||||||||||||| |||||  ||  ||||||||||| |||||||| ||| ||||||| ||||| |||||| | ||||| ||||||||    
T  44592125 aagataatgggacatatttaagtacttttcattagagtccttattagtgtattgttattggagtcatcgagttcttaataggtacttttattaaaaa 44592221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 1837800 - 1837881
Alignment:
Q  67 catatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaa 148  Q
    ||||||||||| |||||  ||  ||||||||||| |||||||||||| ||||||||||||  |||||| | ||||| |||||    
T  1837800 catatttaagtactttttatttgagtccttattagtgtattgtcattggagtcattgagtctttaataagtacttttattaa 1837881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 48767877 - 48767977
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataa 158  Q
    ||||||||||||||||||  |||||  ||| ||||| | ||  ||||||  |||| ||||||||||||  |||||| | ||||||||||||||| |||||    
T  48767877 tagtgagacatatttaagcacttttcattggagtccctgttggtgtattaccattggagtcattgagtccttaataggaactttcattaaaaaattataa 48767976  T
Q  159 a 159  Q
    |    
T  48767977 a 48767977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 8352683 - 8352737
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatt 113  Q
    ||||||||| |||||||||  ||||  ||||||||||||||| ||||||||||||    
T  8352683 tagtgagacttatttaagtatttttcattgaagtccttattagtgtattgtcatt 8352737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 43788592 - 43788658
Alignment:
Q  93 ccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||||||| ||||||| |||| ||||||||||||  |||||| | ||||| ||||||||| ||||||    
T  43788592 ccttattagtgtattgccattggagtcattgagtccttaataggtacttttattaaaaaattataaa 43788658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 8515610 - 8515514
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaa 151  Q
    |||| |||| |||||||||||||  ||||  ||  ||||||||||| ||||||| |||| |||||||||| |  |||||| | ||||| ||||||||    
T  8515610 aagacagtgggacatatttaagtattttttattcgagtccttattagtgtattgccattggagtcattgaatccttaataggtacttttattaaaaa 8515514  T

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Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 565391 - 565477
Alignment:
Q  66 acatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaa 152  Q
    |||||||||||| |||||   || ||||||||||| |||||||||||| |||| |||||||  |||||| | |||||||||||||||    
T  565391 acatatttaagtacttttcaatggagtccttattagtgtattgtcattggagttattgagtccttaataagtactttcattaaaaaa 565477  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 15958792 - 15958699
Alignment:
Q  66 acatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||||||||||| |||||  ||| ||||||||||| |||||||||||| |||| |||||||  |||||| | | ||| ||||||||| ||||||    
T  15958792 acatatttaagtacttttcattggagtccttattagtgtattgtcattggagttattgagtctttaataggtaattttattaaaaaattataaa 15958699  T

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Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 4898222 - 4898316
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtcc-ttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaa 152  Q
    ||||||||| ||||||||| |||||  ||| ||||| |||||| ||||||||||||  |||  ||||||| |||||| | |||||||||||||||    
T  4898222 tagtgagacttatttaagtacttttcattggagtcccttattagtgtattgtcattgaagttgttgagttcttaataggtactttcattaaaaaa 4898316  T

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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 8516990 - 8516886
Alignment:
Q  55 aagatagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaact 154  Q
    |||||||||  ||||||||||||  ||||  ||| ||| | | ||| |||||||||||| ||||||||||||  |||||| | ||||| ||||||||| |    
T  8516990 aagatagtggaacatatttaagtattttttattggagttcatgttagtgtattgtcattagagtcattgagtccttaataagtacttttattaaaaaatt 8516891  T
Q  155 ataaa 159  Q
    |||||    
T  8516890 ataaa 8516886  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 31046444 - 31046350
Alignment:
Q  65 gacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataaa 159  Q
    |||||||||||||  ||||  ||||| ||| ||||| ||||||||| || ||||||||||||  ||||||   ||||| ||||||||| ||||||    
T  31046444 gacatatttaagtattttttattgaaatccatattagtgtattgtctttagagtcattgagtccttaatagatacttttattaaaaaattataaa 31046350  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 159
Target Start/End: Complemental strand, 31066392 - 31066292
Alignment:
Q  59 tagtgagacatatttaagtgcttttagttgaagtccttattaatgtattgtcatttgagtcattgagttattaatatggactttcattaaaaaactataa 158  Q
    ||||| |||||||||||||  ||||  ||| | ||| ||||| |||||||||||| |||||||| |||  ||||||   ||||| ||||||||| |||||    
T  31066392 tagtgggacatatttaagtatttttcattggaatccatattagtgtattgtcattagagtcattaagtccttaatagatacttttattaaaaaattataa 31066293  T
Q  159 a 159  Q
    |    
T  31066292 a 31066292  T

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