View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16693_low_14 (Length: 356)
Name: NF16693_low_14
Description: NF16693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16693_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 285
Target Start/End: Complemental strand, 26894298 - 26894033
Alignment:
| Q |
18 |
ttacttcccactcatttcgccccttctctctctttctttcatttgcaattcctatcattctttctttggtcaaaatccnnnnnnnnnnnnccagaacatc |
117 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
26894298 |
ttacttcccactcatttcgccccttctctccctttctttcatttgcaattcctatcattctttctttggtcaaaatccattttttttt--ccagaacatc |
26894201 |
T |
|
| Q |
118 |
gcaacactatgctaatttcacaaccccttttgacaaaacttgatcttgtgttaatgtgcacattttttacattgatataaaaatttgtcacannnnnnnc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
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| T |
26894200 |
gcaacactatgctaatttcacaaccccttttgacaaaacttgatcttgtgttaatgtggacattttttacattgatataaaaatttgtcacatttttttc |
26894101 |
T |
|
| Q |
218 |
cactatatgcacaagggctagggctagtttttatttgagacctttcaagctttgcaatacattgccct |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26894100 |
cactatatgcacaagggctagggctagtttttatttgagacctttcaagctttgcaatacattgccct |
26894033 |
T |
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