View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16693_low_31 (Length: 240)

Name: NF16693_low_31
Description: NF16693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16693_low_31
NF16693_low_31
[»] chr4 (44 HSPs)
chr4 (1-230)||(20521815-20522046)
chr4 (13-131)||(24343470-24343590)
chr4 (26-140)||(20633439-20633552)
chr4 (59-138)||(23293010-23293089)
chr4 (59-140)||(847905-847986)
chr4 (60-140)||(19482622-19482702)
chr4 (27-91)||(34589698-34589762)
chr4 (13-121)||(7012039-7012155)
chr4 (59-130)||(21945467-21945538)
chr4 (61-140)||(27706203-27706282)
chr4 (1-91)||(18513205-18513297)
chr4 (33-131)||(8820371-8820471)
chr4 (13-119)||(40481612-40481718)
chr4 (59-131)||(36635287-36635359)
chr4 (44-114)||(16184799-16184867)
chr4 (19-136)||(33950094-33950208)
chr4 (61-140)||(35158011-35158090)
chr4 (61-131)||(11931243-11931313)
chr4 (56-138)||(44081598-44081680)
chr4 (59-140)||(903876-903957)
chr4 (99-140)||(4157112-4157153)
chr4 (61-138)||(12895300-12895377)
chr4 (65-130)||(16402241-16402306)
chr4 (59-119)||(14126135-14126195)
chr4 (66-137)||(18743838-18743908)
chr4 (46-85)||(21873382-21873421)
chr4 (46-85)||(21929243-21929282)
chr4 (64-103)||(41601668-41601707)
chr4 (59-129)||(11651158-11651228)
chr4 (56-114)||(12077808-12077866)
chr4 (49-107)||(20743292-20743350)
chr4 (59-121)||(22440624-22440686)
chr4 (56-129)||(28084486-28084560)
chr4 (43-84)||(2234260-2234301)
chr4 (2-119)||(3947732-3947850)
chr4 (49-102)||(5654605-5654658)
chr4 (62-119)||(28720851-28720907)
chr4 (61-126)||(30838178-30838243)
chr4 (56-108)||(35723405-35723458)
chr4 (49-102)||(43299985-43300038)
chr4 (56-113)||(44796983-44797040)
chr4 (67-119)||(12628617-12628669)
chr4 (58-114)||(12895139-12895194)
chr4 (34-87)||(31243545-31243600)
[»] chr1 (44 HSPs)
chr1 (59-140)||(398789-398870)
chr1 (60-140)||(9709774-9709854)
chr1 (61-131)||(15323126-15323196)
chr1 (59-130)||(2896145-2896216)
chr1 (59-138)||(6612195-6612274)
chr1 (59-131)||(34298399-34298471)
chr1 (56-119)||(6427325-6427388)
chr1 (60-129)||(10572614-10572683)
chr1 (49-114)||(16812523-16812588)
chr1 (13-126)||(20157326-20157441)
chr1 (66-131)||(40917714-40917779)
chr1 (76-129)||(48040503-48040556)
chr1 (27-114)||(52903229-52903313)
chr1 (49-89)||(351098-351138)
chr1 (57-129)||(1262849-1262921)
chr1 (59-139)||(1486733-1486813)
chr1 (59-131)||(15641054-15641126)
chr1 (59-131)||(47989461-47989532)
chr1 (61-140)||(9103594-9103673)
chr1 (61-131)||(13011241-13011312)
chr1 (56-91)||(17425114-17425149)
chr1 (24-88)||(40747760-40747826)
chr1 (61-140)||(41877496-41877575)
chr1 (13-88)||(42004923-42005000)
chr1 (56-129)||(5927361-5927434)
chr1 (59-108)||(36878447-36878496)
chr1 (59-140)||(38503274-38503355)
chr1 (59-119)||(5376524-5376584)
chr1 (13-108)||(17831504-17831604)
chr1 (56-140)||(23531799-23531883)
chr1 (56-140)||(38078682-38078761)
chr1 (93-140)||(10577793-10577840)
chr1 (56-114)||(18556477-18556535)
chr1 (49-115)||(30847734-30847800)
chr1 (61-119)||(48450613-48450671)
chr1 (59-140)||(40285678-40285759)
chr1 (59-140)||(42359473-42359554)
chr1 (61-114)||(46348409-46348462)
chr1 (59-119)||(5898290-5898350)
chr1 (62-114)||(6415028-6415080)
chr1 (59-127)||(7918235-7918303)
chr1 (59-107)||(27471590-27471638)
chr1 (59-131)||(31015006-31015078)
chr1 (45-97)||(32340650-32340702)
[»] chr8 (37 HSPs)
chr8 (44-140)||(37283819-37283915)
chr8 (57-140)||(22651930-22652013)
chr8 (78-140)||(24413603-24413665)
chr8 (32-131)||(44067479-44067580)
chr8 (59-140)||(29510328-29510409)
chr8 (61-119)||(20873044-20873102)
chr8 (27-121)||(12985365-12985456)
chr8 (59-127)||(13436988-13437056)
chr8 (69-140)||(926822-926893)
chr8 (59-138)||(4673449-4673528)
chr8 (99-138)||(18964127-18964166)
chr8 (59-138)||(24362226-24362305)
chr8 (59-129)||(11927110-11927180)
chr8 (63-129)||(11944630-11944696)
chr8 (59-125)||(36934639-36934705)
chr8 (49-102)||(16987904-16987957)
chr8 (59-140)||(28385018-28385099)
chr8 (49-126)||(28883892-28883969)
chr8 (59-114)||(31109542-31109597)
chr8 (61-139)||(2572082-2572160)
chr8 (44-110)||(9382956-9383022)
chr8 (56-130)||(18170503-18170577)
chr8 (56-130)||(18634071-18634145)
chr8 (61-131)||(22197768-22197838)
chr8 (49-91)||(22770965-22771007)
chr8 (59-140)||(24857963-24858047)
chr8 (59-129)||(25192371-25192441)
chr8 (59-129)||(31556962-31557031)
chr8 (59-129)||(41838147-41838217)
chr8 (99-140)||(3951593-3951634)
chr8 (50-91)||(31548308-31548349)
chr8 (61-137)||(24446986-24447062)
chr8 (59-119)||(24669408-24669468)
chr8 (61-109)||(27101500-27101548)
chr8 (59-119)||(27213522-27213582)
chr8 (59-111)||(34897068-34897120)
chr8 (59-107)||(41831964-41832012)
[»] scaffold0168 (1 HSPs)
scaffold0168 (63-138)||(20999-21074)
[»] chr2 (37 HSPs)
chr2 (44-131)||(28412313-28412400)
chr2 (59-140)||(21616716-21616797)
chr2 (44-131)||(4332889-4332976)
chr2 (45-140)||(18276475-18276570)
chr2 (31-131)||(23354646-23354748)
chr2 (44-126)||(30298456-30298538)
chr2 (31-129)||(23354989-23355089)
chr2 (44-121)||(36409636-36409713)
chr2 (14-127)||(896180-896288)
chr2 (59-119)||(30404874-30404934)
chr2 (59-130)||(23921217-23921288)
chr2 (59-114)||(37411268-37411323)
chr2 (56-114)||(37558957-37559015)
chr2 (46-119)||(21782829-21782902)
chr2 (61-130)||(27286318-27286386)
chr2 (58-114)||(6045939-6045995)
chr2 (59-131)||(15972836-15972908)
chr2 (61-129)||(20539700-20539768)
chr2 (59-119)||(23718001-23718061)
chr2 (59-119)||(24105673-24105733)
chr2 (59-138)||(28677864-28677944)
chr2 (62-138)||(31284004-31284080)
chr2 (59-114)||(16069278-16069333)
chr2 (59-129)||(19536421-19536492)
chr2 (61-140)||(34337202-34337281)
chr2 (99-138)||(34785046-34785085)
chr2 (49-91)||(18570975-18571017)
chr2 (59-113)||(24894370-24894424)
chr2 (27-99)||(34691800-34691869)
chr2 (27-99)||(34714212-34714281)
chr2 (49-118)||(10535773-10535842)
chr2 (59-124)||(32355397-32355462)
chr2 (61-110)||(36281669-36281718)
chr2 (99-140)||(44860282-44860323)
chr2 (59-131)||(15657827-15657899)
chr2 (59-115)||(30717554-30717610)
chr2 (29-91)||(31026698-31026757)
[»] chr5 (51 HSPs)
chr5 (59-137)||(21191080-21191158)
chr5 (59-140)||(13287423-13287504)
chr5 (13-131)||(26205736-26205856)
chr5 (13-130)||(21137653-21137770)
chr5 (59-140)||(21522704-21522785)
chr5 (59-140)||(21533270-21533351)
chr5 (56-115)||(9449448-9449507)
chr5 (61-140)||(19579655-19579734)
chr5 (33-108)||(5467974-5468051)
chr5 (61-131)||(19552569-19552639)
chr5 (49-111)||(19737496-19737558)
chr5 (59-141)||(21541983-21542065)
chr5 (57-131)||(14851315-14851393)
chr5 (71-140)||(15382431-15382500)
chr5 (68-129)||(19820427-19820488)
chr5 (13-87)||(43554528-43554604)
chr5 (59-131)||(6326321-6326393)
chr5 (61-129)||(22013379-22013447)
chr5 (56-140)||(41995425-41995509)
chr5 (48-95)||(11596468-11596515)
chr5 (49-140)||(15410462-15410553)
chr5 (59-109)||(3966488-3966538)
chr5 (59-129)||(26312734-26312804)
chr5 (56-110)||(30098310-30098364)
chr5 (59-128)||(6247588-6247657)
chr5 (61-114)||(14674249-14674302)
chr5 (59-124)||(24906325-24906390)
chr5 (59-116)||(40000559-40000616)
chr5 (56-108)||(31084309-31084361)
chr5 (61-104)||(23220973-23221016)
chr5 (60-119)||(26716119-26716178)
chr5 (60-119)||(26985859-26985918)
chr5 (56-123)||(32428947-32429014)
chr5 (56-107)||(38749584-38749635)
chr5 (64-131)||(42469184-42469251)
chr5 (59-114)||(43001780-43001835)
chr5 (70-116)||(5873548-5873594)
chr5 (61-131)||(16203821-16203891)
chr5 (61-131)||(28262422-28262492)
chr5 (61-131)||(35017000-35017070)
chr5 (76-126)||(36642803-36642853)
chr5 (61-114)||(7175045-7175098)
chr5 (62-131)||(17123011-17123080)
chr5 (59-140)||(17177047-17177128)
chr5 (49-114)||(19168835-19168900)
chr5 (61-114)||(27144443-27144496)
chr5 (60-108)||(2436908-2436956)
chr5 (62-114)||(18586316-18586367)
chr5 (59-103)||(28588698-28588742)
chr5 (50-126)||(30080516-30080592)
chr5 (59-111)||(39698524-39698576)
[»] chr6 (54 HSPs)
chr6 (56-140)||(10294061-10294145)
chr6 (59-139)||(16766652-16766732)
chr6 (60-138)||(9027134-9027212)
chr6 (56-131)||(426535-426610)
chr6 (61-140)||(7938070-7938149)
chr6 (39-86)||(19136848-19136895)
chr6 (59-121)||(9658852-9658914)
chr6 (59-117)||(17341688-17341746)
chr6 (60-129)||(8365544-8365613)
chr6 (59-140)||(8776997-8777078)
chr6 (59-140)||(9107394-9107475)
chr6 (64-131)||(5732539-5732606)
chr6 (59-130)||(34073371-34073442)
chr6 (59-130)||(34595098-34595169)
chr6 (34-131)||(6389706-6389805)
chr6 (56-132)||(9629345-9629421)
chr6 (59-119)||(12696299-12696359)
chr6 (59-138)||(5000650-5000729)
chr6 (45-95)||(2545440-2545490)
chr6 (56-114)||(20371131-20371189)
chr6 (27-110)||(7265588-7265668)
chr6 (59-140)||(7977854-7977935)
chr6 (61-114)||(17841615-17841668)
chr6 (52-89)||(19122259-19122296)
chr6 (56-129)||(30866165-30866238)
chr6 (61-130)||(34447384-34447453)
chr6 (61-129)||(853885-853953)
chr6 (19-88)||(34446571-34446642)
chr6 (59-118)||(3398595-3398653)
chr6 (52-111)||(7930288-7930347)
chr6 (59-114)||(7996402-7996457)
chr6 (59-114)||(8022344-8022399)
chr6 (44-139)||(8805581-8805676)
chr6 (59-118)||(13851712-13851771)
chr6 (49-140)||(30472074-30472165)
chr6 (44-119)||(31579234-31579309)
chr6 (56-91)||(32320690-32320725)
chr6 (56-138)||(4118354-4118436)
chr6 (61-131)||(10889000-10889070)
chr6 (59-105)||(19040341-19040387)
chr6 (45-87)||(29049892-29049934)
chr6 (61-139)||(32248951-32249029)
chr6 (27-119)||(33001284-33001373)
chr6 (59-140)||(10339150-10339231)
chr6 (99-140)||(28715257-28715298)
chr6 (61-140)||(3209336-3209415)
chr6 (56-92)||(9617436-9617472)
chr6 (59-119)||(10770698-10770758)
chr6 (59-119)||(16833283-16833343)
chr6 (27-87)||(21033446-21033506)
chr6 (76-140)||(23130520-23130584)
chr6 (56-88)||(32299281-32299313)
chr6 (65-129)||(33303624-33303688)
chr6 (27-88)||(34541740-34541803)
[»] chr3 (55 HSPs)
chr3 (1-131)||(24205011-24205137)
chr3 (1-84)||(51512147-51512232)
chr3 (8-88)||(12704628-12704710)
chr3 (59-114)||(25948911-25948966)
chr3 (59-140)||(15796318-15796399)
chr3 (59-131)||(8383220-8383292)
chr3 (64-140)||(10335315-10335391)
chr3 (44-119)||(5441040-5441115)
chr3 (59-130)||(28917965-28918036)
chr3 (59-140)||(3164049-3164130)
chr3 (60-125)||(24633736-24633800)
chr3 (59-140)||(35994762-35994842)
chr3 (49-114)||(37077338-37077403)
chr3 (59-140)||(38731172-38731253)
chr3 (59-131)||(25652055-25652127)
chr3 (61-117)||(32804566-32804622)
chr3 (59-114)||(21720744-21720799)
chr3 (27-139)||(34307770-34307884)
chr3 (70-140)||(2684349-2684419)
chr3 (59-137)||(4990991-4991069)
chr3 (62-132)||(12674528-12674598)
chr3 (60-140)||(750643-750724)
chr3 (13-119)||(14223829-14223937)
chr3 (59-140)||(16000040-16000121)
chr3 (61-126)||(25064877-25064942)
chr3 (60-140)||(7171456-7171535)
chr3 (61-129)||(8587047-8587115)
chr3 (59-127)||(14829657-14829724)
chr3 (13-102)||(25074781-25074872)
chr3 (31-88)||(52369781-52369840)
chr3 (61-129)||(55401040-55401108)
chr3 (60-119)||(9800015-9800074)
chr3 (61-116)||(10268512-10268567)
chr3 (27-140)||(25093456-25093566)
chr3 (61-119)||(2620079-2620137)
chr3 (59-129)||(11610486-11610556)
chr3 (59-129)||(14618746-14618816)
chr3 (13-88)||(21211294-21211371)
chr3 (56-138)||(23915915-23915997)
chr3 (56-130)||(39001996-39002070)
chr3 (99-140)||(10318104-10318145)
chr3 (99-140)||(14027969-14028010)
chr3 (61-118)||(28678279-28678336)
chr3 (59-108)||(40052318-40052367)
chr3 (30-108)||(41319303-41319383)
chr3 (49-85)||(1389835-1389871)
chr3 (59-107)||(4987315-4987363)
chr3 (61-129)||(8842295-8842362)
chr3 (50-114)||(10954932-10954996)
chr3 (56-112)||(14832081-14832137)
chr3 (59-119)||(14979156-14979216)
chr3 (60-108)||(15544679-15544727)
chr3 (59-127)||(16789674-16789742)
chr3 (59-119)||(26492229-26492289)
chr3 (59-135)||(32429404-32429480)
[»] scaffold0007 (1 HSPs)
scaffold0007 (56-131)||(225289-225364)
[»] chr7 (41 HSPs)
chr7 (59-126)||(26733272-26733339)
chr7 (61-119)||(15902797-15902855)
chr7 (1-130)||(43249957-43250093)
chr7 (59-130)||(11722122-11722193)
chr7 (59-130)||(19206014-19206085)
chr7 (59-129)||(27945006-27945076)
chr7 (59-140)||(24339596-24339677)
chr7 (65-140)||(1433408-1433483)
chr7 (61-140)||(11061102-11061181)
chr7 (59-138)||(30730993-30731072)
chr7 (16-119)||(4017773-4017878)
chr7 (59-140)||(5409860-5409941)
chr7 (56-131)||(598171-598246)
chr7 (56-107)||(7438693-7438744)
chr7 (14-110)||(17780061-17780159)
chr7 (13-84)||(7133254-7133327)
chr7 (59-109)||(32308105-32308155)
chr7 (99-140)||(9778462-9778503)
chr7 (59-130)||(13585271-13585339)
chr7 (59-140)||(17851385-17851466)
chr7 (59-140)||(22602734-22602815)
chr7 (59-140)||(25481856-25481937)
chr7 (59-131)||(26329406-26329478)
chr7 (45-113)||(29787379-29787447)
chr7 (61-116)||(10042915-10042970)
chr7 (44-91)||(11700806-11700853)
chr7 (62-113)||(21828432-21828483)
chr7 (61-119)||(2425759-2425817)
chr7 (61-139)||(20654454-20654532)
chr7 (13-88)||(23930225-23930302)
chr7 (49-91)||(38134420-38134462)
chr7 (62-128)||(43027496-43027562)
chr7 (59-112)||(1401007-1401060)
chr7 (56-137)||(6028582-6028663)
chr7 (59-128)||(13770657-13770726)
chr7 (101-138)||(18213100-18213137)
chr7 (59-140)||(21141006-21141087)
chr7 (70-119)||(24105653-24105702)
chr7 (59-119)||(22868017-22868077)
chr7 (59-111)||(23191879-23191931)
chr7 (13-102)||(38804531-38804622)
[»] scaffold0027 (1 HSPs)
scaffold0027 (59-140)||(46636-46717)
[»] scaffold0021 (1 HSPs)
scaffold0021 (59-139)||(130437-130517)
[»] scaffold0053 (1 HSPs)
scaffold0053 (68-139)||(8753-8824)
[»] scaffold0223 (1 HSPs)
scaffold0223 (59-129)||(20137-20207)
[»] scaffold0003 (1 HSPs)
scaffold0003 (61-130)||(241558-241627)
[»] scaffold0652 (1 HSPs)
scaffold0652 (59-140)||(486-567)
[»] scaffold0246 (1 HSPs)
scaffold0246 (13-119)||(19551-19657)
[»] scaffold0018 (2 HSPs)
scaffold0018 (60-121)||(192274-192335)
scaffold0018 (59-126)||(178842-178910)
[»] scaffold0103 (1 HSPs)
scaffold0103 (59-114)||(51791-51846)
[»] scaffold0008 (1 HSPs)
scaffold0008 (59-138)||(263396-263475)
[»] scaffold0306 (1 HSPs)
scaffold0306 (59-129)||(13365-13435)
[»] scaffold0152 (1 HSPs)
scaffold0152 (59-129)||(21892-21962)
[»] scaffold0136 (1 HSPs)
scaffold0136 (59-140)||(3873-3959)
[»] scaffold0227 (1 HSPs)
scaffold0227 (99-140)||(15009-15050)
[»] scaffold0004 (1 HSPs)
scaffold0004 (59-111)||(92790-92842)
[»] scaffold0598 (1 HSPs)
scaffold0598 (59-114)||(8077-8132)
[»] scaffold0044 (1 HSPs)
scaffold0044 (59-131)||(53147-53215)
[»] scaffold0171 (1 HSPs)
scaffold0171 (59-119)||(23395-23455)
[»] scaffold0022 (1 HSPs)
scaffold0022 (56-108)||(99879-99931)


Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 20521815 - 20522046
Alignment:
Q  1 cgtgtcatggtttcggacacgcgtcggtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatg 100  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20521815 cgtgtcatggtttcggacatgcgtcggtgtccgacaccgacacgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcgtg 20521914  T
Q  101 tcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccgatcatcgcaaacaaaatctcagtagataatatgaaagtaaaactggaaaatttagaatag 200  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20521915 tcagtgtccgtgtcgtgtctggtgtccatgtacgtatccgatcatcgcaaacaaaatctcagcagataatatgaaagtaaaactggaaaatttagaatag 20522014  T
Q  201 tacttacgtgcgtgtgc--gtgcgtgtctgtg 230  Q
    |||||||||| ||| ||  |||||||||||||    
T  20522015 tacttacgtgtgtgcgcgtgtgcgtgtctgtg 20522046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 24343590 - 24343470
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    ||||||||||||||||||| |||||||||| |||||  || ||| || |||||||||| ||||| ||||||||||||| || ||||| |||| | |||||    
T  24343590 tcggacacgcgtcggtgtcggacaccgacacgacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccg 24343491  T
Q  111 tgtcgtgtctggtgtccgtgt 131  Q
    ||||||||| |||||||||||    
T  24343490 tgtcgtgtccggtgtccgtgt 24343470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 20633552 - 20633439
Alignment:
Q  26 ggtgtccgacaccgacatgacacatg--atttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggt 123  Q
    ||||||||||||||||| ||||| ||  ||| |||||||||||||   ||| ||||||||||| |||| ||| | ||||||||||||| |||||||||||    
T  20633552 ggtgtccgacaccgacacgacacttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggt 20633456  T
Q  124 gtccgtgtacgtatccg 140  Q
    |||||||| ||||||||    
T  20633455 gtccgtgtccgtatccg 20633439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 23293010 - 23293089
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||| ||||||||||||||| ||||||||||| ||||||    
T  23293010 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatc 23293089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 847986 - 847905
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||| ||||| ||||||||||| ||| |||||| |||||||||| |||||||||| || |||| ||| ||||||||    
T  847986 tgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtccatgtccgtatccg 847905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 19482702 - 19482622
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||| || |||||||||||   || ||||| |||||||||| ||||||||||||||||| |||| ||||||||    
T  19482702 gaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcgtatccg 19482622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 34589698 - 34589762
Alignment:
Q  27 gtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggt 91  Q
    ||||||||||| |||| ||||||||||| ||||||||||||| ||||| ||||||| ||||||||    
T  34589698 gtgtccgacactgacacgacacatgattacattgaattatgtcattttctcaaattgttatcggt 34589762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 7012155 - 7012039
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--------atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcag 104  Q
    ||||| ||||||||||||||||||||||||  ||||        |||||  || |||||||||| ||||| |||||||||||||||| ||||| |||| |    
T  7012155 tcggatacgcgtcggtgtccgacaccgacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcgg 7012056  T
Q  105 tgtccgtgtcgtgtctg 121  Q
    |||||||||| ||||||    
T  7012055 tgtccgtgtcctgtctg 7012039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 21945538 - 21945467
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||||||| ||||| ||||||||||| | || |||||||||||||||| ||||| |||| ||||||||||    
T  21945538 tgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtg 21945467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 27706203 - 27706282
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||| | |||||||||   || ||| | ||||||||||| ||||||||||||||||||||| ||||||||    
T  27706203 aattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccg 27706282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 18513205 - 18513297
Alignment:
Q  1 cgtgtcatggtttcggacacgcgtcggtgtccgacaccgaca-tgacac--atgatttcattgaattatgtgattttatcaaattattatcggt 91  Q
    |||||| |||| |||||||| ||||||||||||||| | ||| ||||||  |||||| ||||||||||||| ||||| ||||||||||||||||    
T  18513205 cgtgtcctggtgtcggacacacgtcggtgtccgaca-caacactgacacatatgattacattgaattatgtcattttctcaaattattatcggt 18513297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 8820471 - 8820371
Alignment:
Q  33 gacaccgacatgacacat--gatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||||||| |||||||  || | |||||||||||||||||||||||||||||||||| | | | | |||||||||  |||| || ||| |||||||||    
T  8820471 gacaccgacacgacacatatgactccattgaattatgtgattttatcaaattattatcgatgttgacgtgtcagtgtttgtgttgtatctagtgtccgtg 8820372  T
Q  131 t 131  Q
    |    
T  8820371 t 8820371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 40481718 - 40481612
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacacatg--atttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    ||||||||| |||| ||||| |||||||||| |||| ||  ||| || |||||||||||||||| |||||||||||   |||||||| |||||||||| |    
T  40481718 tcggacacgtgtcg-tgtccaacaccgacataacacttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcag 40481621  T
Q  111 tgtcgtgtc 119  Q
    |||||||||    
T  40481620 tgtcgtgtc 40481612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 36635359 - 36635287
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||||| |||||||||||  ||| | ||| |||||||||||| |||||||| |||||| ||||    
T  36635359 tgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgt 36635287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 16184867 - 16184799
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    ||||||| |||||| |||||| ||||||||| ||||||||||| |||  ||||| ||||||||||||||||    
T  16184867 gacacataatttcactgaattgtgtgattttctcaaattattagcgg--tcggcgtgtcagtgtccgtgtc 16184799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 33950208 - 33950094
Alignment:
Q  19 acgcgtcggtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgt 118  Q
    |||||| |||||| ||||||||||   || |||||| |||| |||||||||||||| ||||||||||| |||  | |   ||||||||| |||||  |||    
T  33950208 acgcgttggtgtctgacaccgaca---catatgattacattaaattatgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtgttatgt 33950112  T
Q  119 ctggtgtccgtgtacgta 136  Q
    ||||||||||||| ||||    
T  33950111 ctggtgtccgtgttcgta 33950094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 35158011 - 35158090
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||||||||  ||||||||||   |  ||||| ||||||||||||||| ||||| ||||||||||| ||||||||    
T  35158011 aattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgtatccg 35158090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 11931313 - 11931243
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||| ||| ||||||| |||| |||||||| || ||||||||| |||||  ||||||||||    
T  11931313 aattatgtgattttttcatattattaacggtgtcggcatggcattgtccgtgtagtgtccagtgtccgtgt 11931243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 44081598 - 44081680
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||| |||||| ||||||| ||||||||||| || ||||||  ||||||||||| ||||||||| | ||| ||||| ||||||    
T  44081598 cattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtgtccgtatc 44081680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 903957 - 903876
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||| ||||  |||  ||||||||||||| |  ||||||| | |||||| ||||||||    
T  903957 tgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgttttatgtctggcgcccgtgtccgtatccg 903876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 4157153 - 4157112
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  4157153 tgtcagtgtctgtgtcgtgtctggtgtccgtgtccgtatccg 4157112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 12895300 - 12895377
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||||||||||||| ||||||||||||  || ||||| ||||| ||| |||||||| || ||||||||| | ||||||    
T  12895300 aattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgtatccgtatc 12895377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 16402241 - 16402306
Alignment:
Q  65 atgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||| ||||| ||||||||||||| || ||||||||||||||| | ||||||||  ||||||||||    
T  16402241 atgttattttctcaaattattatccgtgtcggcatgtcagtgttcatgtcgtgtgcggtgtccgtg 16402306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 14126135 - 14126195
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||| ||||||||||||||| | || ||||| ||| |||||| ||||||||||    
T  14126135 tgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtc 14126195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 18743908 - 18743838
Alignment:
Q  66 tgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtat 137  Q
    ||||||||||||||||||||| |  | ||||||||||||||||||| || | || ||||||||||| |||||    
T  18743908 tgtgattttatcaaattattaacaatgtcggcatgtcagtgtccgtctcatatc-ggtgtccgtgttcgtat 18743838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 21873382 - 21873421
Alignment:
Q  46 cacatgatttcattgaattatgtgattttatcaaattatt 85  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  21873382 cacataatttcactgaattatgtgattttatcaaattatt 21873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 21929243 - 21929282
Alignment:
Q  46 cacatgatttcattgaattatgtgattttatcaaattatt 85  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  21929243 cacataatttcactgaattatgtgattttatcaaattatt 21929282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 41601668 - 41601707
Alignment:
Q  64 tatgtgattttatcaaattattatcggtatcggcatgtca 103  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  41601668 tatgtgattttatcaaattattatcagtgtcggcatgtca 41601707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 11651158 - 11651228
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||| | ||||||||| | || ||| | ||||||||||||| ||||||||  |||||||    
T  11651158 tgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtcttatgtccgt 11651228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 12077866 - 12077808
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    ||||||||||||||||||| ||||||||||| | |||| | | ||||||||| ||||||    
T  12077866 cattgaattatgtgattttctcaaattattaacagtattgacgtgtcagtgttcgtgtc 12077808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 20743292 - 20743350
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgt 107  Q
    |||||| || |||||||||| ||||| ||||||||||||| || ||||| |||||||||    
T  20743292 atgattacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 22440624 - 22440686
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctg 121  Q
    |||||||||||||||| ||||||||||| |||| |||   | ||||||||| |||||||||||    
T  22440624 tgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgtctg 22440686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 28084560 - 28084486
Alignment:
Q  56 cattgaattatgtga-ttttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    ||||||||||||||| |||| ||||||| ||| | || ||||| |||||| ||| |||||||||| |||||||||    
T  28084560 cattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgt 28084486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 2234301 - 2234260
Alignment:
Q  43 tgacacatgatttcattgaattatgtgattttatcaaattat 84  Q
    |||||||| ||| ||||||||||||||||||| |||||||||    
T  2234301 tgacacataattacattgaattatgtgattttctcaaattat 2234260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 3947732 - 3947850
Alignment:
Q  2 gtgtcatggtttcggacacgcgtcggtgtccgacaccgaca-tgacacatg--atttcattgaattatgtgattttatcaaattattatcggtatcggca 98  Q
    ||||| |||| ||||||||| |||| |||||||||| |||| |||||| ||  ||| || ||||||||| |||||| ||||||||||| | || ||||||    
T  3947732 gtgtcctggtgtcggacacgtgtcg-tgtccgacac-gacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggca 3947829  T
Q  99 tgtcagtgtccgtgtcgtgtc 119  Q
    |||| ||||| |||| |||||    
T  3947830 tgtccgtgtctgtgtggtgtc 3947850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 5654605 - 5654658
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtc 102  Q
    |||||| ||||||||||||| ||||| ||||||||||||| || ||| ||||||    
T  5654605 atgattacattgaattatgtcattttctcaaattattatcagtgtcgacatgtc 5654658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 28720907 - 28720851
Alignment:
Q  62 attatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||| ||||||| ||||||||||| | || ||||||||||||||| |||||||||||    
T  28720907 attatatgatttt-tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtc 28720851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 30838243 - 30838178
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtc 126  Q
    |||||| | ||||||||||||||||| | |||||| | | |||||||||||| |||||||| ||||    
T  30838243 aattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtgccgtgtctgttgtc 30838178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 35723405 - 35723458
Alignment:
Q  56 cattgaattatgtg-attttatcaaattattatcggtatcggcatgtcagtgtc 108  Q
    |||||||||||||| ||||| ||||||||||| |||| ||||| ||||||||||    
T  35723405 cattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 43299985 - 43300038
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtc 102  Q
    |||||| ||||||||||||| ||||| ||||||||||||| || || |||||||    
T  43299985 atgattacattgaattatgtaattttctcaaattattatccgtgtctgcatgtc 43300038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 44796983 - 44797040
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgt 113  Q
    ||||||||||||| ||||| |||||||||| ||||| | | |||||| ||||||||||    
T  44796983 cattgaattatgttattttctcaaattattgtcggtgttgacatgtctgtgtccgtgt 44797040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 12628617 - 12628669
Alignment:
Q  67 gtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||| ||||||||||| | || |||||||||||||||| ||||| ||||    
T  12628617 gtgattttttcaaattattaactgtgtcggcatgtcagtgtcagtgtcatgtc 12628669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 12895139 - 12895194
Alignment:
Q  58 ttgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    ||||||||||||||||| ||||||||||| | || ||||| |||| |||||||||||    
T  12895139 ttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgtgtc 12895194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 31243545 - 31243600
Alignment:
Q  34 acaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattat 87  Q
    |||||||||||||||  |||||| || |||||||||| ||||| ||||||||||||    
T  31243545 acaccgacatgacacctatgattacactgaattatgtcattttctcaaattattat 31243600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 398789 - 398870
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||| |||||||| || ||||||||    
T  398789 tgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccg 398870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 9709854 - 9709774
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||||||||| ||||||||||| |||| | ||||||||||||||||||||||||||| ||||| |||  |||||||    
T  9709854 gaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtccatgtctgtatccg 9709774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 15323196 - 15323126
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||| ||||||||||| | |||||| ||||||||||||| ||||||||| |||||||||||    
T  15323196 aattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtccgtgt 15323126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 2896145 - 2896216
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||||||||||||| ||||||||||| |||| ||||| ||||||||||||||| ||||| | ||||||||    
T  2896145 tgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccgtg 2896216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 6612195 - 6612274
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||||||||| ||||| ||||||||||| | |||||||| ||||| ||||||||||||||| ||||| ||||| ||||||    
T  6612195 tgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccgtatc 6612274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 34298471 - 34298399
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||||| |||||||||||  ||| ||||  ||||||| ||||||||||||||||||| |||||    
T  34298471 tgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgtacgtgt 34298399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 6427388 - 6427325
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||||||||||||||||| ||||||||||| |||| | ||| |||||||||||||| ||||||    
T  6427388 cattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtc 6427325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 10572614 - 10572683
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    ||||||||||||||| |||||||||||  ||| ||||| ||||||||| | ||||||||| |||||||||    
T  10572614 gaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgt 10572683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 16812588 - 16812523
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||| || |||||||||||||||| |||||||||||| ||| ||||  ||||||||||||||||    
T  16812588 atgattccactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtc 16812523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 20157326 - 20157441
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgaca-tgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtcc 109  Q
    ||||||||||||||||||| |||| |||||  |||||  |||||| || |||||||||||||||| ||| ||||||| |||| |||   |||||||| ||    
T  20157326 tcggacacgcgtcggtgtcggaca-cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgccc 20157424  T
Q  110 gtgtcgtgtctggtgtc 126  Q
    |||||||||| ||||||    
T  20157425 gtgtcgtgtccggtgtc 20157441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 40917779 - 40917714
Alignment:
Q  66 tgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||||||| ||||||||||| | || ||||| ||||||| ||||||||||||| |||||||||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgtgt 40917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 48040503 - 48040556
Alignment:
Q  76 tcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    ||||||||||||| || ||||| ||||||||||||||||||||| |||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 48040556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 52903313 - 52903229
Alignment:
Q  27 gtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    ||||||||||||||||   || || ||| || |||||||| ||||||||| ||||||||| |||||||||| ||| ||||||||||||    
T  52903313 gtgtccgacaccgaca---catataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 351098 - 351138
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcg 89  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  351098 atgattccattgaattatgtgattttatcaaattattatcg 351138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 1262921 - 1262849
Alignment:
Q  57 attgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||||| ||||||||||| | || ||||| |||| |||| ||||||||||| ||| |||||    
T  1262921 attgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggtatccgt 1262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 1486733 - 1486813
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatcc 139  Q
    |||||||||||||||| ||||||||||| | || || || ||||||| |||||||||| || ||| ||||||| |||||||    
T  1486733 tgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccgtatcc 1486813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 15641054 - 15641126
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||| |||||||||| | ||||||||| | || |||||||||||||||||||||| |||| | |||||||||    
T  15641054 tgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgt 15641126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 47989532 - 47989461
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||||| | |||||||||| | | ||||| |||||||||| |||||||||||||| |||||||    
T  47989532 tgaattatgtgatttttttaaattattattg-tgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgt 47989461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 9103673 - 9103594
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||| ||||||||||| | || ||||| |||||||||||| ||| |||| ||||| ||||| | ||||||    
T  9103673 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtcaggtgttcgtgtccatatccg 9103594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 13011241 - 13011312
Alignment:
Q  61 aattatgtgattttat-caaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||| | |||||||||| | || ||||||||||||||| ||||||||||  |||||||||||    
T  13011241 aattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtccgtgt 13011312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 91
Target Start/End: Original strand, 17425114 - 17425149
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggt 91  Q
    ||||||||||||||||||||||||||||||||||||    
T  17425114 cattgaattatgtgattttatcaaattattatcggt 17425149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 40747760 - 40747826
Alignment:
Q  24 tcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatc 88  Q
    ||||||||||||||| |||||||||  || ||| ||||||||||||| ||||| |||||||||||||    
T  40747760 tcggtgtccgacaccaacatgacacctataattacattgaattatgtcattttctcaaattattatc 40747826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 41877496 - 41877575
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||| ||||| ||||||||||| |||| ||||| |  ||||||| |||||||||||||| ||| ||| ||||||||    
T  41877496 aattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccatgtccgtatccg 41877575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 42004923 - 42005000
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatc 88  Q
    ||||||| ||||||||||||||||||||||  ||||  |||||| || | |||||||| ||||| |||||||||||||    
T  42004923 tcggacatgcgtcggtgtccgacaccgacacaacacctatgattacactaaattatgtcattttctcaaattattatc 42005000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 5927361 - 5927434
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||| |||||| ||||||| ||||||||||| | || |  || ||||||||||||||||||||| |||||||||    
T  5927361 cattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgt 5927434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 36878496 - 36878447
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtc 108  Q
    |||||||||||||||| ||||||||||| |||| ||||| ||||||||||    
T  36878496 tgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 38503355 - 38503274
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||| ||| ||||||| ||||||||||| |||| ||||  ||| |||||||||||| ||||  |||||||||| ||||||||    
T  38503355 tgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgtatccg 38503274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 5376524 - 5376584
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||| ||||| | ||||||||| |||| ||||| ||| |||||||||||||||||    
T  5376524 tgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtc 5376584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 17831504 - 17831604
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgac-----acatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgt 107  Q
    ||||||||  ||||||||||||||| |||| |||     | |||||| || ||||| |||||||||| ||||||||||| |||| ||||| |||||||||    
T  17831504 tcggacacatgtcggtgtccgacactgacacgacgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 17831603  T
Q  108 c 108  Q
    |    
T  17831604 c 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 23531799 - 23531883
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| || ||||||||||| | |||| |   |||| |||||||| |||||||  |||||||||| ||||||||    
T  23531799 cattgaattatgtgatattttcaaattattagcagtattgaagtgtcggtgtccgtatcgtgtccagtgtccgtgtccgtatccg 23531883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 38078682 - 38078761
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||||||||||||| ||||||||||| | || ||| | |||||||||     ||||||| ||||||||||| ||||||||    
T  38078682 cattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccgtgtccgtatccg 38078761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 10577793 - 10577840
Alignment:
Q  93 tcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||| |||| |||||||||||||||| ||||||||||| ||||||||    
T  10577793 tcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccg 10577840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 18556477 - 18556535
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||| ||||||||||| || ||||||||||| | || ||||| ||||||||||||||||    
T  18556477 cattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 30847734 - 30847800
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcg 115  Q
    |||||| ||||||||||||| ||||| ||||||||||| | || || ||||||| ||| ||||||||    
T  30847734 atgattacattgaattatgtcattttttcaaattattagcagtgtcagcatgtcggtgcccgtgtcg 30847800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 48450613 - 48450671
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||| ||||| ||||||||||| | || | ||| |||||||||||||||||||||    
T  48450613 aattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtc 48450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 40285678 - 40285759
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||| |||||| ||||||||||| |||| | ||  ||||||||||| | ||||| ||||| ||| ||| ||||||||    
T  40285678 tgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgtccatctcgtgcctggtttccatgttcgtatccg 40285759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 42359473 - 42359554
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| ||||||||| |||||||||||   || || || ||||||||||||||| ||||  ||||| ||||| ||||||||    
T  42359473 tgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccgtatccg 42359554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 46348409 - 46348462
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||| ||||||| ||||||||||| | || ||||| ||||||||||||||||    
T  46348409 aattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 5898290 - 5898350
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||||| ||| ||||||| |||| ||||| | |||||||| ||||| ||||    
T  5898290 tgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtc 5898350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 6415028 - 6415080
Alignment:
Q  62 attatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    ||||||||||||| |||||| |||| || | ||||| ||||||||||||||||    
T  6415028 attatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtc 6415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 7918235 - 7918303
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtcc 127  Q
    |||||||||||||||| |||||||||||  | | || || ||||| |||| |||||||||| |||||||    
T  7918235 tgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtcc 7918303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 27471590 - 27471638
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgt 107  Q
    ||||||||||| |||| ||||||||||| |||||||||  |||||||||    
T  27471590 tgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgt 27471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 31015078 - 31015006
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||||| ||||||||||| | || | |||  ||||||| |||||||||| | |||||| ||||    
T  31015078 tgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgt 31015006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 32340650 - 32340702
Alignment:
Q  45 acacatgatttcattgaattatgtgattttatcaaattattatcggtatcggc 97  Q
    |||||||||| |||| |||||||| ||||| ||||||||||||  ||||||||    
T  32340650 acacatgattgcattaaattatgtcattttttcaaattattattagtatcggc 32340702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 37283819 - 37283915
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||| ||| || |||||||||||||||| ||| ||||||| ||||  | ||||||||||||||||||| |||||||||||| ||||||||||||    
T  37283819 gacacataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtccatgtacgtatccg 37283915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 22652013 - 22651930
Alignment:
Q  57 attgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||||| ||||||||||| | || ||||| ||||||||||||||||||||| |||||| |||| ||||||||    
T  22652013 attgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtatccg 22651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 24413603 - 24413665
Alignment:
Q  78 aaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||| |||| || | |||||||||||||||||||||||||||||||||| ||||||||    
T  24413603 aaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtatccg 24413665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 44067580 - 44067479
Alignment:
Q  32 cgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    ||||||||||| |||||  || ||| || || ||||||| ||||| ||||||||||||| || ||||| |||||||||| |||| |||||||||||||||    
T  44067580 cgacaccgacacgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgt 44067481  T
Q  130 gt 131  Q
    ||    
T  44067480 gt 44067479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 29510328 - 29510409
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| ||||||||| ||||||||||| | || ||||| ||||||||||||||||||||| ||||||| |||  |||||||    
T  29510328 tgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatccg 29510409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 20873102 - 20873044
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||| |||||||||||||  | ||||| |||||||||||||||||||||    
T  20873102 aattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtc 20873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 12985456 - 12985365
Alignment:
Q  27 gtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctg 121  Q
    |||||||||||||||||   | |||||| ||||||||||||||||||| |||||||||||| ||| || |||| ||| |||  ||| ||||||||    
T  12985456 gtgtccgacaccgacat---atatgattacattgaattatgtgattttctcaaattattataggtgtctgcatctcactgtttgtgccgtgtctg 12985365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 13436988 - 13437056
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtcc 127  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||||||||| |||| |||| |||||||    
T  13436988 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtcc 13437056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 926822 - 926893
Alignment:
Q  69 gattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| |||||||||||   || | ||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccg 926893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 4673449 - 4673528
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||||| | ||||||| ||||||||||||| || ||||| |||||||||| |||||||||| | ||||||| | ||||||    
T  4673449 tgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgtatc 4673528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 18964166 - 18964127
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  18964166 tgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtatc 18964127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 24362226 - 24362305
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||||||||||||| | ||||||||||| |||| ||||| |||| ||||| ||||||| || ||||||||| | ||||||    
T  24362226 tgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatc 24362305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 11927110 - 11927180
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||||||||||||||| | || ||||| | | ||  |||||||||||| ||||||||||    
T  11927110 tgaattatgtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggtgtccgt 11927180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 11944696 - 11944630
Alignment:
Q  63 ttatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||||||||||| | || ||||| ||| ||  |||||||||||| ||||||||||    
T  11944696 ttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgt 11944630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 36934705 - 36934639
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgt 125  Q
    |||||||||||||||| || |||||||| |||| ||| | ||| |||||||||||||||| ||||||    
T  36934705 tgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgt 36934639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 16987957 - 16987904
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtc 102  Q
    |||||| |||||||||| |||||||| ||||||||||| |||||||||| ||||    
T  16987957 atgattgcattgaattacgtgattttctcaaattattaccggtatcggcttgtc 16987904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 28385018 - 28385099
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||| |||||  ||| ||||||| |||| |||| |||||||||||||||||||||   || ||||||| ||||||||    
T  28385018 tgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgttcagtatccgtgttcgtatccg 28385099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 28883892 - 28883969
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtc 126  Q
    |||||| || |||||||||| ||||| ||||||||||||  ||  ||||||||||||||||||| | |||| ||||||    
T  28883892 atgattccactgaattatgtcattttctcaaattattattcgtggcggcatgtcagtgtccgtgacatgtcaggtgtc 28883969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 31109542 - 31109597
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||| | ||||||| ||||||||||| |||| ||||| ||||||||||||||||    
T  31109542 tgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtc 31109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 2572082 - 2572160
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatcc 139  Q
    |||||||||||||| |||||||||||   || ||| | |||| || |||||||||||||  |||||||||| |||||||    
T  2572082 aattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccgtatcc 2572160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 9383022 - 9382956
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    ||||||| ||| |||||||||||||  |||| ||||||||||   ||||||||| ||||||||||||    
T  9383022 gacacataattacattgaattatgtagttttctcaaattattcatggtatcggcgtgtcagtgtccg 9382956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 18170503 - 18170577
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    ||||||||||||| ||||| ||||||| |||   || ||||| ||||||||||||||||||| | ||| ||||||    
T  18170503 cattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgtg 18170577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 18634071 - 18634145
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    ||||||||||||| ||||| ||||||| |||   || ||||| ||||||||||||||||||| | ||| ||||||    
T  18634071 cattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgtg 18634145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 22197768 - 22197838
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||| ||| ||||||||||| | || | ||| ||| |||||| |||||||||| |||||||||||    
T  22197768 aattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgt 22197838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 22771007 - 22770965
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggt 91  Q
    |||||| |||||||||||||  |||||||||||||||||||||    
T  22771007 atgattacattgaattatgttgttttatcaaattattatcggt 22770965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 24858047 - 24857963
Alignment:
Q  59 tgaattatgtgattttat---caaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| |   |||||||||| | || ||||| ||||  ||||||||||||||| ||||| ||||| ||||||||    
T  24858047 tgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttcgtgtccgtatccg 24857963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 25192371 - 25192441
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||| | ||| ||||||||||| | || ||||| ||||||||||||| ||||||| | |||||||    
T  25192371 tgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgt 25192441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 31557031 - 31556962
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||| ||||||||||| | || ||||| |||||||| || |||| |||| |||||||||    
T  31557031 tgaattatgtgatttt-tcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgt 31556962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 41838147 - 41838217
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||| | ||||||||| | || ||| | ||||||||||||| ||||||||  |||||||    
T  41838147 tgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtcttatgtccgt 41838217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 3951593 - 3951634
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||| ||||||||||||| |||||||||||||| ||||||||    
T  3951593 tgtcggtgtccgtgtcgtatctggtgtccgtgtccgtatccg 3951634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 31548308 - 31548349
Alignment:
Q  50 tgatttcattgaattatgtgattttatcaaattattatcggt 91  Q
    ||||| ||||||||||||| |||||||||||| |||||||||    
T  31548308 tgattacattgaattatgtcattttatcaaataattatcggt 31548349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 24447062 - 24446986
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtat 137  Q
    |||||||||||||| ||||||||| | || ||| ||| ||||||| ||||||| || |||| |||| |||| |||||    
T  24447062 aattatgtgattttctcaaattatcaacgttattggcgtgtcagtatccgtgttgtatctgatgtcggtgttcgtat 24446986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 24669468 - 24669408
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||| ||||  ||||||||||| |||| || || |||||||||| ||||||||||    
T  24669468 tgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtc 24669408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 27101548 - 27101500
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtcc 109  Q
    |||||||||||||| ||||||||||| |||| ||||| ||||| |||||    
T  27101548 aattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgtcc 27101500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 27213582 - 27213522
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||||| | ||||||||| | || ||||| |||| || |||||||||||||    
T  27213582 tgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtc 27213522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 34897120 - 34897068
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgt 111  Q
    |||||||||||||||| ||||||||||| |||| ||| | |||| ||||||||    
T  34897120 tgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 41831964 - 41832012
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgt 107  Q
    |||||||||||||||| ||||||||||| | || |||||||||| ||||    
T  41831964 tgaattatgtgattttttcaaattattaactgtgtcggcatgtctgtgt 41832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 21074 - 20999
Alignment:
Q  63 ttatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||||||||||| ||||||||||| | || || |||||||||||||||||||||||||||||||||||| ||||||    
T  21074 ttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgtatc 20999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 28412400 - 28412313
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||||| ||| || |||||||||||||||||||||||||||| |||| | | | ||| |||||||||||||||||||||||||||||    
T  28412400 gacacataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgt 28412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 21616797 - 21616716
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||||||  ||||| |||| ||||||||    
T  21616797 tgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccg 21616716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 4332976 - 4332889
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||||| ||| |||||||||||||||||||  |||||||||||| || ||||||||| ||| || ||| |||||| |||||||||||    
T  4332976 gacacataattacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgtgt 4332889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 18276570 - 18276475
Alignment:
Q  45 acacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| ||| || ||||||| |||||||| ||||||||||| |||| ||||||| |||||||| || ||||||| |||||||||||  |||||||    
T  18276570 acacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgtatccg 18276475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 23354646 - 23354748
Alignment:
Q  31 ccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccg 128  Q
    |||||||||||| |||||  |||||| || | |||||| | ||||| ||||||||||||| || || ||||||| ||||||||||| |||| ||||||||    
T  23354646 ccgacaccgacacgacacctatgattacactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtccggtgtccg 23354745  T
Q  129 tgt 131  Q
    |||    
T  23354746 tgt 23354748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 30298456 - 30298538
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtc 126  Q
    ||||||||||| || |||||||||| ||||||| |||||||||||||| ||| | |||| | || ||| ||||||||||||||    
T  30298456 gacacatgattacactgaattatgtcattttattaaattattatcggtgtcgacgtgtcggcgttcgtatcgtgtctggtgtc 30298538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 23354989 - 23355089
Alignment:
Q  31 ccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccg 128  Q
    ||||||||||||||||||  |||||| || | |||||| | ||||| ||||||||||||| || || ||||||| ||||||||||| ||||  |||||||    
T  23354989 ccgacaccgacatgacacctatgattgcactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtcccgtgtccg 23355088  T
Q  129 t 129  Q
    |    
T  23355089 t 23355089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 36409636 - 36409713
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctg 121  Q
    ||||||| ||| || | |||||||||||||| ||||||||| | |||| ||||||||| ||| |||||||||||||||    
T  36409636 gacacataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtctg 36409713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 896288 - 896180
Alignment:
Q  14 cggacacgcgtcggtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgt 113  Q
    |||||| |||| |||||||||| ||||||   || |||||| ||||||| ||||||||||| ||||| ||||| | || ||||| |||||||||  ||||    
T  896288 cggacatgcgttggtgtccgacgccgaca---catatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt--gtgt 896194  T
Q  114 cgtgtctggtgtcc 127  Q
    |||||| |||||||    
T  896193 cgtgtccggtgtcc 896180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 30404874 - 30404934
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||||| ||||||||||| | || ||||| |||||||||||||||| ||||    
T  30404874 tgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtc 30404934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 23921288 - 23921217
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||||||| ||||| ||||||||||| |||||||| | ||||| |||| || |||||||| |||||||||    
T  23921288 tgaattatgtaattttctcaaattattaacggtatcgacctgtcaatgtctgtatcgtgtctcgtgtccgtg 23921217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 37411268 - 37411323
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||| ||| |||||    
T  37411268 tgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 37559015 - 37558957
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||||||||||||  |||||||||| | || ||||| ||||||||||||||||    
T  37559015 cattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 21782829 - 21782902
Alignment:
Q  46 cacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||| ||| || |||||||||||||||| ||||||||||| | || ||||| |||||||||  ||||||||||    
T  21782829 cacataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtc 21782902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 27286318 - 27286386
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    ||||||||||| |||||||||||||| || | ||||| | ||||||||||| |||||||| |||||||||    
T  27286318 aattatgtgatcttatcaaattattagcgttgtcggcgtatcagtgtccgtatcgtgtct-gtgtccgtg 27286386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 6045939 - 6045995
Alignment:
Q  58 ttgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    ||||||| | ||||||||||||||||||| |||||| ||| |||| |||||||||||    
T  6045939 ttgaattgtatgattttatcaaattattagcggtatgggcttgtcggtgtccgtgtc 6045995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 15972908 - 15972836
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||| ||| ||||| |||||||||||   || ||||| |||||||||||||||||| ||||||||| ||||    
T  15972908 tgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtgtctgtgt 15972836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 20539700 - 20539768
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||| ||||||| ||||||||||| | || ||| | |||||||||||||||||||||  ||||||||    
T  20539700 aattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgt 20539768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 23718061 - 23718001
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||| ||| ||||||||||| |||| ||||  |||||||||||||||| ||||    
T  23718061 tgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 23718001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 24105733 - 24105673
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||| ||| ||||||||||| |||| ||||  |||||||||||||||| ||||    
T  24105733 tgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 24105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 28677944 - 28677864
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc-gtgtctggtgtccgtgtacgtatc 138  Q
    |||||||||||||||| ||||||||||| |||| ||||| |  ||||||| ||||| ||||| | ||| ||||||||||||    
T  28677944 tgaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtcagtgtcagtgtccgttgtacgtgtacgtatc 28677864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 31284080 - 31284004
Alignment:
Q  62 attatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    ||||||||||||| ||||||||||| | || ||||| ||| ||||| |||||  |||| ||||||||||| ||||||    
T  31284080 attatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatc 31284004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 16069278 - 16069333
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||| ||||||| | ||||||||| |||| ||||| ||||||||||||||||    
T  16069278 tgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 19536421 - 19536492
Alignment:
Q  59 tgaattatgtgattttat-caaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||| | ||||||||||   || ||||| ||||| ||||||||||||||| |||||||||    
T  19536421 tgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 19536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 34337202 - 34337281
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||| ||||||||| | | || ||||| ||||| |||||||||||| |  ||| ||||||| ||||||||    
T  34337202 aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgtatacggtatccgtgtccgtatccg 34337281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 34785046 - 34785085
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  34785046 tgtcagtgtccgtgtcgtgtctggggtccgtgtccgtatc 34785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 18571017 - 18570975
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggt 91  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||    
T  18571017 atgattacattgaattatgtcattttctcaaattattatcggt 18570975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 24894424 - 24894370
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgt 113  Q
    |||||||||||||||| | ||||||||| | || ||||| |||||||||||||||    
T  24894424 tgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 34691800 - 34691869
Alignment:
Q  27 gtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcat 99  Q
    ||||||||||||||||   || || ||| || |||||||| ||||||||||||||||||| |||||| |||||    
T  34691800 gtgtccgacaccgaca---catataattacactgaattatatgattttatcaaattattagcggtatgggcat 34691869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 34714212 - 34714281
Alignment:
Q  27 gtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcat 99  Q
    ||||||||||||||||   || || ||| || |||||||| ||||||||||||||||||| |||||| |||||    
T  34714212 gtgtccgacaccgaca---catataattacactgaattatatgattttatcaaattattagcggtatgggcat 34714281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 10535773 - 10535842
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgt 118  Q
    |||||| || |||||||||| ||||| |||||||||||||||| ||||| | | ||| || |||||||||    
T  10535773 atgattacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgt 10535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 32355462 - 32355397
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtg 124  Q
    |||||||| ||||||||||||||||||| | |||||||| | | ||| ||||||| || |||||||    
T  32355462 tgaattatttgattttatcaaattattaacagtatcggcgtattagtatccgtgttgtatctggtg 32355397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 36281718 - 36281669
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    |||||||||||||| ||||||||||| |||||| |||||||  |||||||    
T  36281718 aattatgtgattttctcaaattattaacggtattggcatgttggtgtccg 36281669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 44860323 - 44860282
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||||||||||||||||||||| ||| | ||||||||    
T  44860323 tgtcagtgtccgtgtcgtgtctggtgtacgtatccgtatccg 44860282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 15657899 - 15657827
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||||||||||||||  ||||||||||   |  ||||| ||| ||||||||||||||||| |||| ||||||    
T  15657899 tgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtgaccgtgt 15657827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 30717554 - 30717610
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcg 115  Q
    |||||||||||||||| ||||||||||| |  | ||||  |||||||||||||||||    
T  30717554 tgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 31026757 - 31026698
Alignment:
Q  29 gtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggt 91  Q
    |||||||||||||||   | |||||| ||||||||||||| ||||| | ||||||||||||||    
T  31026757 gtccgacaccgacat---atatgattacattgaattatgtcattttcttaaattattatcggt 31026698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 21191080 - 21191158
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtat 137  Q
    |||||||||||||||| ||||||||||| | || ||||||||||||||||||||||||||| |||||| |||| |||||    
T  21191080 tgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 13287423 - 13287504
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||||| || ||| | ||| ||||||||||||||||| ||||||||||| ||||||||    
T  13287423 tgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccgtatccg 13287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 26205736 - 26205856
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    ||||| |||||| ||||||||||||| ||| |||||  |||||| || |||||||||| ||||| ||||| | |||||||||||| | |||||||||||     
T  26205736 tcggatacgcgttggtgtccgacaccaacacgacacctatgattacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtcagtgtcca 26205835  T
Q  111 tgtcgtgtctggtgtccgtgt 131  Q
    |||| |||| |||||||||||    
T  26205836 tgtcatgtccggtgtccgtgt 26205856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 21137770 - 21137653
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    |||||||||||| ||||||||||  ||||| |||||  ||||||||| ||||||| || ||||| ||| ||||||| || | ||||| ||||||||||||    
T  21137770 tcggacacgcgttggtgtccgac--cgacacgacacctatgatttcactgaattacgtcattttctcagattattaccgatgtcggcgtgtcagtgtccg 21137673  T
Q  111 tgtcgtgtctggtgtccgtg 130  Q
    ||| ||||| ||||||||||    
T  21137672 tgttgtgtccggtgtccgtg 21137653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 21522785 - 21522704
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||| ||||| | ||||||||| | || ||||| ||||||||||||||||||||| |||| |||||| ||||||||    
T  21522785 tgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccg 21522704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 21533351 - 21533270
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||| ||||| | ||||||||| | || ||||| ||||||||||||||||||||| |||| |||||| ||||||||    
T  21533351 tgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccg 21533270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 9449507 - 9449448
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcg 115  Q
    ||||||||||||||||||| |||||||||||| ||| ||||| || ||||||||||||||    
T  9449507 cattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtcg 9449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 19579734 - 19579655
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||| ||||||||||| | || ||||| | ||||||||||||| || || |||||| |||||||||||||    
T  19579734 aattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatccg 19579655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 5467974 - 5468051
Alignment:
Q  33 gacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtc 108  Q
    |||||||||| |||||  || ||| || ||||||||||||||||||||||||||||||||||| | | ||||||||||    
T  5467974 gacaccgacacgacacctataattacactgaattatgtgattttatcaaattattatcggtattgacgtgtcagtgtc 5468051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 19552569 - 19552639
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||| ||||||||||| | || ||||| ||||||||||||||||||||  |||| ||||||    
T  19552569 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtggccgtgt 19552639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 19737496 - 19737558
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgt 111  Q
    |||||| ||||||||||||| ||||| |||||||||||||||| || || |||||||||||||    
T  19737496 atgattgcattgaattatgtaattttctcaaattattatcggtttcagcgtgtcagtgtccgt 19737558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 21542065 - 21541983
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccga 141  Q
    |||||||||| || || | |||||||||   || ||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  21542065 tgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtctggtgtccgtgtccgtatccga 21541983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 14851393 - 14851315
Alignment:
Q  57 attgaattatgtgattttatcaaattattat----cggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||||||||||||||||||||    || |||  || ||||||||| |||||||||| ||||||||||||    
T  14851393 attgaattatgtgattttatcaaattattatatatcgatattagcgtgtcagtgttcgtgtcgtgtttggtgtccgtgt 14851315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 15382500 - 15382431
Alignment:
Q  71 ttttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||| ||||||||||| | || ||||| ||||| ||||||||||||||| ||||||||||| ||||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccg 15382431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 19820427 - 19820488
Alignment:
Q  68 tgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    ||||||| ||||||||||| |||| ||||  ||||||||||||||||||||| |||||||||    
T  19820427 tgattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgt 19820488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 43554604 - 43554528
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattat 87  Q
    |||||||||||||||||||||||||||||| |||||  |||||| || | |||||| | ||||| ||||||||||||    
T  43554604 tcggacacgcgtcggtgtccgacaccgacacgacacctatgattacactaaattatatcattttctcaaattattat 43554528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 6326321 - 6326393
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||| ||||| |||||||| || || | ||||| ||||||||||||||||||||| ||| |||||||    
T  6326321 tgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgt 6326393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 22013447 - 22013379
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||| |||||  |||||||||| | || ||||| ||||||||||||||||||||| |||||||||    
T  22013447 aattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 22013379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 41995509 - 41995425
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||||||||||||| || ||||||||   || ||||| |||||||||| ||||||| ||  |||||||||| ||||||||    
T  41995509 cattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccg 41995425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 11596468 - 11596515
Alignment:
Q  48 catgatttcattgaattatgtgattttatcaaattattatcggtatcg 95  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  11596468 catgattacattgaattatgtcattttctcaaattattatcggtatcg 11596515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 15410462 - 15410553
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| || ||||| || | ||||| | ||||||||| |||| ||||| ||||||||||||||||||||||| |||||  || ||||||||    
T  15410462 atgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctgatgtccacgtccgtatccg 15410553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 3966538 - 3966488
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtcc 109  Q
    |||||| ||||||||| ||||||||||| |||| |||||||||||||||||    
T  3966538 tgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 26312804 - 26312734
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||  ||||||| ||||||||||  |||||||||||| ||||||||| |||||||||  ||||||||    
T  26312804 tgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtccatgtcgtgtccagtgtccgt 26312734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 30098364 - 30098310
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    ||||||||||||||||||| ||||||||||| |||| ||| | ||||||||||||    
T  30098364 cattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 6247657 - 6247588
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccg 128  Q
    |||||||||||||||| |||||||||||   || ||||| ||||||||| ||| ||||||| ||||||||    
T  6247657 tgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccg 6247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 14674302 - 14674249
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||||||| ||||||||||| | || ||||| ||||||||||||||||    
T  14674302 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 24906325 - 24906390
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtg 124  Q
    |||||||||| ||||| ||||||||||||| || | ||| ||||||||| ||||||||||| ||||    
T  24906325 tgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccggtg 24906390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 40000559 - 40000616
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgt 116  Q
    |||||||||||||||| |||||||||||   || ||| ||||||||||||||||||||    
T  40000559 tgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgt 40000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 31084361 - 31084309
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtc 108  Q
    ||||||||||||||||||| ||||||||||| | || ||||| ||||||||||    
T  31084361 cattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 23221016 - 23220973
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcag 104  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||    
T  23221016 aattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 26716178 - 26716119
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||||||||||||| ||||||||||| | || ||||||||||| ||||  |||||||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtc 26716119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 26985918 - 26985859
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||||||||||||| ||||||||||| | || ||||||||||| ||||  |||||||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtc 26985859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 32428947 - 32429014
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggt 123  Q
    ||||||||||||| | ||| ||||||||||||| || ||  |||||||||||||||||| ||| ||||    
T  32428947 cattgaattatgtcactttctcaaattattatcagtgtcaccatgtcagtgtccgtgtcatgtttggt 32429014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 38749584 - 38749635
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgt 107  Q
    ||||||||||||| ||||| |||||||||||||||| ||| |||||| ||||    
T  38749584 cattgaattatgtcattttttcaaattattatcggtgtcgacatgtccgtgt 38749635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 42469251 - 42469184
Alignment:
Q  64 tatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||| ||||| ||||||||||||| || ||||| ||||| | ||||||||||||  |||||||||||    
T  42469251 tatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgt 42469184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 43001835 - 43001780
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||| ||||| ||||||||||| | || ||| ||||||||||||||||||    
T  43001835 tgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 5873548 - 5873594
Alignment:
Q  70 attttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgt 116  Q
    ||||| |||||||||||  ||| ||||||||||||||||||||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtgtcgt 5873594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 16203821 - 16203891
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||||| |||||| ||||||||||| | || ||||||||| |||||||||||| |||  |||||| ||||    
T  16203821 aattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgtgt 16203891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 28262422 - 28262492
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||| ||||||||| | || ||| ||| ||||||| ||||||| || ||||||||| ||||    
T  28262422 aattatgtgattttctcaaattatcaacgttattggcgtgtcagtatccgtgttgtatctggtgtcggtgt 28262492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 35017070 - 35017000
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||| |||||||||||  ||| ||||| |||| |||| | | |||||| ||||||||||||    
T  35017070 aattatgtgattttctcaaattattagtggtttcggcgtgtcggtgttcatatcgtgtatggtgtccgtgt 35017000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 36642803 - 36642853
Alignment:
Q  76 tcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtc 126  Q
    ||||||||||| | || ||||| ||||||||||||||||||||| ||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 36642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 7175045 - 7175098
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||||||| ||||||||||| |||| |||   ||||||||||||||||    
T  7175045 aattatgtgattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 17123080 - 17123011
Alignment:
Q  62 attatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||||||||||| ||||||||||| |||| | ||| ||||||||||| |||  |||| | |||||||||    
T  17123080 attatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccgtgt 17123011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 17177047 - 17177128
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| | ||||||| ||||||||||| | || | ||| | |||||||||| ||||| ||||||||| |||| ||||||||    
T  17177047 tgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgtatccg 17177128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 19168835 - 19168900
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||| || ||||| ||||||||||||||||||| || |||| | ||  ||||||||||||||||    
T  19168835 atgattacactgaataatgtgattttatcaaattaatagcggtgtaggtgtgtcagtgtccgtgtc 19168900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 27144496 - 27144443
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||||||  ||||||||||| |||| ||||| |||||||||| |||||    
T  27144496 aattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 2436956 - 2436908
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtc 108  Q
    |||||||||||||||  |||||||||| |||| ||||| ||||||||||    
T  2436956 gaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 18586316 - 18586367
Alignment:
Q  62 attatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    ||||||| ||||| ||||||||||||| |||||| |||||||||||| |||||    
T  18586316 attatgtcatttt-tcaaattattatccgtatcgacatgtcagtgtcagtgtc 18586367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 28588698 - 28588742
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtca 103  Q
    |||||||||||||||| ||||||||||| |||| ||||| |||||    
T  28588698 tgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 30080516 - 30080592
Alignment:
Q  50 tgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtc 126  Q
    ||||| ||||||||||||| ||||| ||||| | ||||| || ||| ||| || |||||  ||||||||||||||||    
T  30080516 tgattacattgaattatgtcattttctcaaaattttatcagtgtcgacatttccgtgtcattgtcgtgtctggtgtc 30080592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 39698576 - 39698524
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgt 111  Q
    |||||||||||||||| ||||||||||| | || || || |||||||||||||    
T  39698576 tgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 10294145 - 10294061
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||| |||| |||| | ||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||    
T  10294145 cattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccgtatccg 10294061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 16766732 - 16766652
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatcc 139  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||||||||| ||||||||| ||||||||||| |||||||    
T  16766732 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatcc 16766652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 9027212 - 9027134
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    ||||||||||||| | ||||||||||| |||| ||||| ||||||||||||||||||||| || |||||||| ||||||    
T  9027212 gaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccgtatc 9027134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 426535 - 426610
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||| |||||||||||||| ||||||||||| | || ||||| ||||||||||||||||||||| ||| |||||||    
T  426535 catttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgt 426610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 7938149 - 7938070
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| ||||||| ||||||||||| | || ||||| ||||||||||| ||||||||| ||||||||||| ||||||||    
T  7938149 aattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccg 7938070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 19136848 - 19136895
Alignment:
Q  39 gacatgacacatgatttcattgaattatgtgattttatcaaattatta 86  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19136848 gacatgacacatgatttcattgaattacgtgattttatcaaattatta 19136895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 9658914 - 9658852
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctg 121  Q
    |||||||||||||||| | ||||||||| |||| ||||| |||||||||||||||||||||||    
T  9658914 tgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctg 9658852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 17341688 - 17341746
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtg 117  Q
    |||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||    
T  17341688 tgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 8365544 - 8365613
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||| || |||||||||||   || ||||| |||||||||||||||||||||||||||||||    
T  8365544 gaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgt 8365613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 8776997 - 8777078
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| ||||||||| |||||||||||   || ||||| ||||||||||||||||||||| | ||||||||| ||||||||    
T  8776997 tgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccg 8777078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 9107394 - 9107475
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| ||||||||| ||||||||||| | || ||||| ||| ||||||||||||||||| |||||||||||  |||||||    
T  9107394 tgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcagtatccg 9107475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 5732539 - 5732606
Alignment:
Q  64 tatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||||||||| ||||||||||| |||| ||||| ||||||||||| |||||||||  ||||||||||    
T  5732539 tatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgtgt 5732606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 34073371 - 34073442
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    ||||||||| |||||| ||||||||||| || | | |||||||||||||||||||||||||  |||||||||    
T  34073371 tgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgtg 34073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 34595169 - 34595098
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||||||||||||| |||||||||||   || ||||| ||||| ||||||||||||||| ||||||||||    
T  34595169 tgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtg 34595098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 6389805 - 6389706
Alignment:
Q  34 acaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||||||| |||||  |||||| || | |||||| | ||||| ||||||||||||| || ||||| ||| ||||||||||||||||| |||||| ||||    
T  6389805 acaccgacacgacacctatgattacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgt 6389706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 9629421 - 9629345
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgta 132  Q
    ||||||||||||||||||| ||||||||||  |||| ||||| ||||| | |||||||||||||  ||||| |||||    
T  9629421 cattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgtgta 9629345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 12696359 - 12696299
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||| ||||| ||||||||||| | || ||||| |||||||||||||||||||||    
T  12696359 tgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 12696299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 5000650 - 5000729
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    ||||| |||||||||| || |||||||| |||| ||| | ||||||| |||||||| |||| |||||||||||| |||||    
T  5000650 tgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatc 5000729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 2545490 - 2545440
Alignment:
Q  45 acacatgatttcattgaattatgtgattttatcaaattattatcggtatcg 95  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||| |||||    
T  2545490 acacatgattttattgaactatatgattttatcaaattattatcgatatcg 2545440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 20371131 - 20371189
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||| |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||||    
T  20371131 cattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 7265588 - 7265668
Alignment:
Q  27 gtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    ||||||||||||||||   || || ||| || |||||||||||||||| ||||||||||| |||| | ||| ||||||||||||    
T  7265588 gtgtccgacaccgaca---catataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 7977854 - 7977935
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||| ||||| ||||||||||| | || ||||| ||||||| ||| |||||||||  |||||||||| | ||||||    
T  7977854 tgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgtccatatccg 7977935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 17841615 - 17841668
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||||||| ||||||||||| | || ||||| ||||||||||||||||    
T  17841615 aattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 19122259 - 19122296
Alignment:
Q  52 atttcattgaattatgtgattttatcaaattattatcg 89  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19122259 atttcattgatttatgtgattttatcaaattattatcg 19122296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 30866165 - 30866238
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    ||||||||||||||||||| ||||||||||| |||| | ||  |||| ||||| ||||| |||| |||||||||    
T  30866165 cattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgt 30866238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 34447384 - 34447453
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||| ||||||||||||||||||| |||| | ||| ||||| |||| ||||  |||||||||||||||    
T  34447384 aattatatgattttatcaaattattaacggtgttggcgtgtcattgtctgtgttatgtctggtgtccgtg 34447453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 853885 - 853953
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||| |||||||||||   || ||||| ||||||  ||||||||||||| |||||||||    
T  853885 aattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgt 853953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 34446642 - 34446571
Alignment:
Q  19 acgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatc 88  Q
    ||||||||||||  |||||||||| |||||  |||||| || |||||||||| ||||| |||||||||||||    
T  34446642 acgcgtcggtgttggacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattatc 34446571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 3398653 - 3398595
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgt 118  Q
    |||||||| ||||||| ||||||||||| | || ||||| ||||||||||||||||||||    
T  3398653 tgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 7930347 - 7930288
Alignment:
Q  52 atttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgt 111  Q
    |||||| | |||||||||||||| |||||||||||   || |||||||||||||||||||    
T  7930347 atttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 7996402 - 7996457
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||| ||||||| ||||||||||| | || ||||||||||||||||| ||||    
T  7996402 tgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtc 7996457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 8022399 - 8022344
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||| ||||||| ||||||||||| | || ||||||||||||||||| ||||    
T  8022399 tgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtc 8022344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 8805581 - 8805676
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatcc 139  Q
    ||||||| ||| || | |||||||||||||| ||||||||||| | ||  || | |||| ||||| ||||||||||||||||  ||||| ||||||    
T  8805581 gacacataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgtatcc 8805676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 13851771 - 13851712
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgt 118  Q
    ||||||| || ||||| ||||||||||| |||| ||| | ||||||||||||||||||||    
T  13851771 tgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 30472074 - 30472165
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| |||||| |||||||||||| | || ||||||||||| |  || ||||||||| |||||| ||| || ||||||| || |||||||    
T  30472074 atgattccattgatttatgtgattttttaaagttattatcggttttagcgtgtcagtgttcgtgtcatgtttgttgtccgtatatgtatccg 30472165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 31579234 - 31579309
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||||| ||| || |||||||||||||||| ||||||||||| |||| | ||  || |||||||| |||||||||    
T  31579234 gacacataattacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtc 31579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 91
Target Start/End: Original strand, 32320690 - 32320725
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggt 91  Q
    ||||||||||||||||||||||||||||||| ||||    
T  32320690 cattgaattatgtgattttatcaaattattaacggt 32320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 4118354 - 4118436
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||| |||||||||||||| ||||||||||| |  ||||| | ||| | | | ||||||||||| ||||||||||| ||||||    
T  4118354 catttaattatgtgattttttcaaattattaactatatcgtcgtgttaatatacgtgtcgtgtccggtgtccgtgtccgtatc 4118436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 10889000 - 10889070
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||||||||||||||| |||| ||    |||| ||||||||||| ||| || |||||||||    
T  10889000 aattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtcatgtttgatgtccgtgt 10889070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 19040387 - 19040341
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagt 105  Q
    |||||||||||||||| ||||||||||| |||| ||||| |||||||    
T  19040387 tgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 29049934 - 29049892
Alignment:
Q  45 acacatgatttcattgaattatgtgattttatcaaattattat 87  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||    
T  29049934 acacatgattacattgaattatgtaattttctcaaattattat 29049892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 32248951 - 32249029
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatcc 139  Q
    |||||||||||||| | ||||||| | || ||| ||| ||||||| ||||||| || ||||||||| |||| |||||||    
T  32248951 aattatgtgattttttaaaattatcaacgttattggcgtgtcagtatccgtgttgtatctggtgtcggtgttcgtatcc 32249029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 33001284 - 33001373
Alignment:
Q  27 gtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||||||||||||||   || || ||| |||| |||||||||||||| ||||||||||| | || ||||| ||||| || |||||| |||||    
T  33001284 gtgtccgacaccgaca---catataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtc 33001373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 10339150 - 10339231
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| |||||||| |  |||| ||||| ||||||||| | |||||||||  |||||| |||  |||||||    
T  10339150 tgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccg 10339231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 28715298 - 28715257
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||    
T  28715298 tgtcagtgtccgtatcgtgtccggtgtccgtgtccgtatccg 28715257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 3209415 - 3209336
Alignment:
Q  61 aattatgtgattttat-caaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||| | |||||||||| | || ||||| |||| ||||| |||||||||| |||||||||||  |||||||    
T  3209415 aattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgtc-gtgtcgtgtccggtgtccgtgtttgtatccg 3209336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 9617472 - 9617436
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggta 92  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  9617472 cattgaattatgtgattttctcaaattattaccggta 9617436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 10770698 - 10770758
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||||| |||||||||||   || | ||| ||||||||||| |||||||||    
T  10770698 tgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtc 10770758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 16833343 - 16833283
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||| ||||||||||| |||||||||||   || ||||| |||||||||| ||||||||||    
T  16833343 tgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 16833283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 21033446 - 21033506
Alignment:
Q  27 gtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattat 87  Q
    ||||| ||||||||||||||  |||||| | |||||| |||| ||||| ||||||||||||    
T  21033446 gtgtctgacaccgacatgacttatgattgccttgaatcatgtcattttttcaaattattat 21033506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 23130520 - 23130584
Alignment:
Q  76 tcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||||| |  | |||||||||||||||| |||| ||||||| |||||||||  |||||||    
T  23130520 tcaaattattagctatgtcggcatgtcagtgtcagtgttgtgtctgatgtccgtgtctgtatccg 23130584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 32299313 - 32299281
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatc 88  Q
    ||||||||||||||||||| |||||||||||||    
T  32299313 cattgaattatgtgattttctcaaattattatc 32299281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 33303688 - 33303624
Alignment:
Q  65 atgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||| ||||| ||||||||||||  || |||   ||||||||||||| |||||||||||||||||    
T  33303688 atgtcattttttcaaattattattagtgtcgatgtgtcagtgtccgtatcgtgtctggtgtccgt 33303624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 34541740 - 34541803
Alignment:
Q  27 gtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatc 88  Q
    |||||| |||||||||||||||  |||||| ||||||||| ||| ||||| || ||||||||||    
T  34541740 gtgtccaacaccgacatgacacatatgattacattgaattttgtcattttttctaattattatc 34541803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 24205011 - 24205137
Alignment:
Q  1 cgtgtcatggtttcggacacgcgtcggtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatg 100  Q
    |||||| |||| ||||||||||||| ||||||||||| ||||   |  || ||| || || ||||||| ||||| ||||||||||||| || ||||| ||    
T  24205011 cgtgtcctggtgtcggacacgcgtcagtgtccgacac-gaca---cttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtg 24205106  T
Q  101 tcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||||||||||||||||| |||||||||||    
T  24205107 tcagtgtccgtgtcgtgtccggtgtccgtgt 24205137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 51512147 - 51512232
Alignment:
Q  1 cgtgtcatggtttcggacacgcgtcggtgtccgacaccgacatgacacat--gatttcattgaattatgtgattttatcaaattat 84  Q
    |||||| |||| || ||||||| ||||||| ||||||||||| |||||||  |||| |||||||||||||||||||||||||||||    
T  51512147 cgtgtcctggtgtcagacacgcatcggtgttcgacaccgacacgacacatatgattccattgaattatgtgattttatcaaattat 51512232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 12704628 - 12704710
Alignment:
Q  8 tggtttcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatc 88  Q
    |||| ||||||| |||| ||||||||||||||||| |||||  |||||| ||||||||||||| ||||| |||||||||||||    
T  12704628 tggtgtcggacatgcgttggtgtccgacaccgacacgacacctatgattacattgaattatgtcattttttcaaattattatc 12704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 25948911 - 25948966
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||    
T  25948911 tgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 15796318 - 15796399
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||| ||||||| ||||||||||| | || ||||| ||||| ||||||||||||||| ||||||||||| | ||||||    
T  15796318 tgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccg 15796399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 8383292 - 8383220
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||| ||||||| ||||||||||| |||| ||||| ||||| |||||||||||||||  ||||||||||    
T  8383292 tgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgt 8383220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 10335315 - 10335391
Alignment:
Q  64 tatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||| ||| |||||||||||   || ||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  10335315 tatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccg 10335391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 5441040 - 5441115
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||||| ||| ||||||||||||||||||| ||||||| ||| ||||  |||| |||||||||| ||||||||||    
T  5441040 gacacataattccattgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtc 5441115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 28918036 - 28917965
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||||||||||||| ||||||||||| |  | ||||| ||||||| ||||||||||||| ||||||||||    
T  28918036 tgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgtg 28917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 3164049 - 3164130
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||| | || ||| | || || ||||||||||||||| |||||||||||  |||||||    
T  3164049 tgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccg 3164130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 24633800 - 24633736
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgt 125  Q
    ||||||||||||||| |||||||||||  ||| ||||||||||| |||||||||| ||||||||||    
T  24633800 gaattatgtgattttctcaaattattagtggtgtcggcatgtca-tgtccgtgtcatgtctggtgt 24633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 35994762 - 35994842
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||| ||||| ||||||||| ||||||| ||| ||||||||    
T  35994762 tgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccg 35994842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 37077403 - 37077338
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||| ||||||||||||| || || |||||||||||||||| ||||| ||||| ||||||||||    
T  37077403 atgattccattgaattatgttatattctcaaattattatcggtgtcggcgtgtcactgtccgtgtc 37077338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 38731253 - 38731172
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| | ||||||||| |||||||| |||||| |||| | ||||||||| | ||||||||| || |||||    
T  38731253 tgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgtacatgtcgtgtccgttgtccgtgtccgcatccg 38731172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 25652055 - 25652127
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||| | ||||| ||||||||||||| || | ||| ||| ||||||||||||||||||||||| |||||    
T  25652055 tgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtctggtgttcgtgt 25652127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 32804566 - 32804622
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtg 117  Q
    |||||||||||||| ||||||||||| |||| ||||||||||| || ||||||||||    
T  32804566 aattatgtgattttctcaaattattaacggtgtcggcatgtcaatgcccgtgtcgtg 32804622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 21720799 - 21720744
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    ||||||||| ||| || |||||||||||||||| ||||| ||||||||||||||||    
T  21720799 tgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgtc 21720744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 34307770 - 34307884
Alignment:
Q  27 gtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtg 124  Q
    |||||||||||||||| |||||  || ||| || |||| ||||||||||| ||||||||||| |||| || || |||  ||||| ||||| |||| ||||    
T  34307770 gtgtccgacaccgacacgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtg 34307869  T
Q  125 tccgtgtacgtatcc 139  Q
    | ||||| |||||||    
T  34307870 ttcgtgtccgtatcc 34307884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 2684349 - 2684419
Alignment:
Q  70 attttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||| ||||||||||| ||||  || ||| ||| ||||||||||||||||||||||||||| | ||||||    
T  2684349 attttctcaaattattagcggtgccgacatttcaatgtccgtgtcgtgtctggtgtccgtgtgcatatccg 2684419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 4990991 - 4991069
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtat 137  Q
    |||||||||| ||||| ||||| ||||| |||| ||||  ||||||| ||||||||||||  ||||||||||| |||||    
T  4990991 tgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgtccgtat 4991069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 12674528 - 12674598
Alignment:
Q  62 attatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgta 132  Q
    ||||| ||||||| ||||||||||| | || ||||  ||||| |||||||||||||||||||||| |||||    
T  12674528 attatttgattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtctggtgtctgtgta 12674598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 750643 - 750724
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtca-gtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||| || |||||||||||   || ||| | ||||| |||||||||||||||| ||||||||||| ||||||||    
T  750643 gaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtccgtgtccgtatccg 750724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 14223829 - 14223937
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    ||||||||| ||||||||| |||||||||| |||||  |||| | || | |||||| |  |||| ||||||||||||| || ||||| |||| ||||| |    
T  14223829 tcggacacgtgtcggtgtcggacaccgacacgacacttatgaatacactaaattatatcgttttctcaaattattatctgtgtcggcgtgtcggtgtctg 14223928  T
Q  111 tgtcgtgtc 119  Q
    |||||||||    
T  14223929 tgtcgtgtc 14223937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 16000040 - 16000121
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||| ||||| | |||||||||   || ||||| |||||||||| |||||||||  ||||||||||| ||||||||    
T  16000040 tgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccgtatccg 16000121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 25064942 - 25064877
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtc 126  Q
    |||||||||||||| |||||| |||| |||| ||||| ||||| |||| |||||||||| ||||||    
T  25064942 aattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtc 25064877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 7171535 - 7171456
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||| ||||||| ||||||||  | | || ||||||||||||| ||||||||||||| |||||| |||| ||||||||    
T  7171535 gaattatatgatttt-tcaaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgtgtccgtatccg 7171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 8587047 - 8587115
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||| |||||||| ||   || ||||| |||||||||||||||| |||| |||||||||    
T  8587047 aattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgt 8587115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 14829724 - 14829657
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtcc 127  Q
    |||||||||||||||| ||||||||||| | || ||||| |||||||||| ||||| |||| |||||||    
T  14829724 tgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtcc 14829657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 25074872 - 25074781
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtc 102  Q
    |||||||||||| |||||| ||||||||||  || |  |||||| || | |||||||| ||||| |||||||||||||||| ||||| ||||    
T  25074872 tcggacacgcgttggtgtcagacaccgacacaacgcctatgattacactcaattatgtcattttctcaaattattatcggtgtcggcgtgtc 25074781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 52369840 - 52369781
Alignment:
Q  31 ccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatc 88  Q
    |||||||||||| |||||  |||||| ||||||||||||| ||||| |||||||||||||    
T  52369840 ccgacaccgacacgacacctatgattacattgaattatgtaattttctcaaattattatc 52369781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 55401108 - 55401040
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||| |||||||||||   || ||||| | |||||||||||||||| || |||||||||    
T  55401108 aattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgt 55401040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 9800074 - 9800015
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||||||| ||||| |||||||||||  ||| ||||| ||||||||| |||||||||||    
T  9800074 gaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtc 9800015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 10268512 - 10268567
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgt 116  Q
    |||||||||||||| ||||||||||| | || ||||| ||||||||||| ||||||    
T  10268512 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 25093566 - 25093456
Alignment:
Q  27 gtgtccgacaccgacatgacacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtc 126  Q
    |||||||||||||||   ||| || ||| || |||||| ||||||||| |||||| |||| | || ||||| ||| |||||| |||||||||| ||||||    
T  25093566 gtgtccgacaccgac---acatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtc 25093470  T
Q  127 cgtgtacgtatccg 140  Q
     ||||  |||||||    
T  25093469 tgtgtttgtatccg 25093456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 2620079 - 2620137
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||| |||||| ||||  ||| ||||| |||||||||||| ||||||||    
T  2620079 aattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtc 2620137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 11610556 - 11610486
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||| | ||||||||| |||| | ||| ||||||| || |||| ||||||| |||||||    
T  11610556 tgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtatctgtgttgtgtctgatgtccgt 11610486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 14618816 - 14618746
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    ||||||||||| |||| | |||||||||  ||| || || | |||||| ||||||||||||||||||||||    
T  14618816 tgaattatgtggttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtctggtgtccgt 14618746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 21211371 - 21211294
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgaca--catgatttcattgaattatgtgattttatcaaattattatc 88  Q
    |||||||||||||||||||  ||||||||| ||||  ||| ||| || |||| ||||| ||||| |||||||||||||    
T  21211371 tcggacacgcgtcggtgtcgaacaccgacacgacacccataattacactgaactatgtaattttctcaaattattatc 21211294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 23915997 - 23915915
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||| |||| ||||||||| |||| || ||| | || | ||||||||||| || |||||||||| ||||||||||| ||||||    
T  23915997 catttaattgtgtgattttttcaagttgttagctgtgttggcatgtcagtttctgtgtcgtgtccggtgtccgtgtccgtatc 23915915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 39002070 - 39001996
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    ||||||||||||||||||| |||||||  ||||  | ||||  ||||||||| ||||||||||  ||||||||||    
T  39002070 cattgaattatgtgattttttcaaattcctatccatgtcggtgtgtcagtgtacgtgtcgtgttcggtgtccgtg 39001996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 10318104 - 10318145
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||| |||||||||||||||| ||||||||||| ||||||||    
T  10318104 tgtccgtgtccgtgtcgtgtccggtgtccgtgttcgtatccg 10318145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 14028010 - 14027969
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||| |||||||||||||||| ||||||||||| ||||||||    
T  14028010 tgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccg 14027969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 28678336 - 28678279
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgt 118  Q
    |||||||||||||||| ||||||||| | |  ||||||||||||||||  ||||||||    
T  28678336 aattatgtgattttattaaattattagcagcgtcggcatgtcagtgtctatgtcgtgt 28678279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 40052367 - 40052318
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtc 108  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 41319303 - 41319383
Alignment:
Q  30 tccgacaccgacatgacacatg--atttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtc 108  Q
    ||||||||||||| |||||||   ||| ||||||||||||| ||||| |||||||||||| ||| ||| | |||| |||||    
T  41319303 tccgacaccgacacgacacatacaattacattgaattatgtcattttttcaaattattattggtgtcgacgtgtccgtgtc 41319383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 1389871 - 1389835
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattatt 85  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  1389871 atgattccatagaattatgtgattttatcaaattatt 1389835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 4987315 - 4987363
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgt 107  Q
    |||||||||||||||| ||||||||||| | || ||||| |||||||||    
T  4987315 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 8842362 - 8842295
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    ||||||||||||||   ||||||||| |||| ||||||||||| | |||||||||| || |||||||||    
T  8842362 aattatgtgattttca-aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgt 8842295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 10954996 - 10954932
Alignment:
Q  50 tgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    ||||| || |||||||||||||||| |||||||||||   || ||||| ||||||||| ||||||    
T  10954996 tgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 14832137 - 14832081
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtg 112  Q
    |||||| |||||||||||| ||||||||||| | |||||||| |||| || ||||||    
T  14832137 cattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgtg 14832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 14979216 - 14979156
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||||| ||||||||||| | || ||||| || || ||||| |||||||||    
T  14979216 tgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtc 14979156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 15544727 - 15544679
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtc 108  Q
    ||||||||||||||||||||||||||| |||| ||  | ||||||||||    
T  15544727 gaattatgtgattttatcaaattattagcggtgtcaacgtgtcagtgtc 15544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 16789674 - 16789742
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtcc 127  Q
    |||||||||| ||||| ||||||||||||| || ||||||| || || |||||||| | || |||||||    
T  16789674 tgaattatgtcattttctcaaattattatctgtgtcggcatctcggtatccgtgtcatctccggtgtcc 16789742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 26492229 - 26492289
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||| | ||||||| ||||||||||| |  | ||||| |||||||||||||||||||||    
T  26492229 tgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtc 26492289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 32429404 - 32429480
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgt 135  Q
    |||||||||||||||| | ||||||||| || | ||||  ||||| ||| ||||| ||||| ||||||||| |||||    
T  32429404 tgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgt 32429480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 225289 - 225364
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    ||||| ||||||| ||||| ||||||||||||| || ||||| ||||||||||||||||||||| |||||||||||    
T  225289 cattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgt 225364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 26733339 - 26733272
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtc 126  Q
    |||||||||||||||| ||||||||||| |||| ||| | ||||||||||||||||||||||||||||    
T  26733339 tgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtc 26733272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 15902855 - 15902797
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  15902855 aattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtc 15902797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 43250093 - 43249957
Alignment:
Q  1 cgtgtcatggtttcggacacgcgtcggtgtccgac-----accgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtat 93  Q
    |||||| |||| ||||||||||||| |||||||||     ||||||| |||||  || ||| || || ||||||| ||||| ||||||||||||| || |    
T  43250093 cgtgtcctggtgtcggacacgcgtcagtgtccgacgcgacaccgacacgacacttataattacactgtattatgtcattttctcaaattattatccgtgt 43249994  T
Q  94 cggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||| |||||||||||||||| |||| ||||||||||    
T  43249993 cggcgtgtcagtgtccgtgtcttgtccggtgtccgtg 43249957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 11722122 - 11722193
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||||||||||||| ||||||| ||| |||| ||||| ||||||||||||||||||||| ||| ||||||    
T  11722122 tgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtg 11722193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 19206085 - 19206014
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||||||||||||| ||||||||||| |||| ||||| |||  |||||||||||||||||||| ||||||    
T  19206085 tgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgtg 19206014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 27945076 - 27945006
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||| ||||| |||||||||||  ||| ||||| ||||||||||||||||||||| |||||||||    
T  27945076 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 27945006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 24339677 - 24339596
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||| ||||| ||||||||| ||||||||| | ||||||||    
T  24339677 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccgtatccg 24339596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 1433483 - 1433408
Alignment:
Q  65 atgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||| ||||||||||| |||| ||||| ||||| ||||||||||||||  ||||||||||  ||||||||    
T  1433483 atgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccg 1433408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 11061102 - 11061181
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||| ||||||||||| | || ||||  |||||||||||||||||| || | ||||||||| ||||||||    
T  11061102 aattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgtatccg 11061181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 30731072 - 30730993
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    |||||||||||||||| ||||||||||  |||| ||||| || || |||  |||||||||||||||||||||| ||||||    
T  30731072 tgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatc 30730993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 4017773 - 4017878
Alignment:
Q  16 gacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgt 113  Q
    ||||| ||||||||||||||||| ||| |||||  |||||| || | |||||| |  |||| ||||||||||||| || ||||| |||| ||||||||||    
T  4017773 gacacacgtcggtgtccgacaccaacacgacacttatgattacactaaattatatcgttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgt 4017872  T
Q  114 cgtgtc 119  Q
    ||||||    
T  4017873 cgtgtc 4017878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 5409860 - 5409941
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||| | ||||| || ||||||||||| |||||| || |||||| ||||  |||||||    
T  5409860 tgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctgtatccg 5409941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 598246 - 598171
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||| ||||| |||||||| | ||||||||| |||| |||   |||||||||||||||| ||||||||||||||||    
T  598246 catttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgtgt 598171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 7438744 - 7438693
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgt 107  Q
    ||||||||||||||||||| ||||||||||| | || |||||||||||||||    
T  7438744 cattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 17780061 - 17780159
Alignment:
Q  14 cggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    ||||||||||||||||| ||||||||||| |||||  || ||| ||| ||||||||| ||||| | |||||||||||  | || ||||||| |||||||    
T  17780061 cggacacgcgtcggtgttcgacaccgacacgacacctattattacatagaattatgtcattttcttaaattattatccatgtcagcatgtcggtgtccg 17780159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 7133254 - 7133327
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattat 84  Q
    ||||||||||||||||||||||||||||||   |||  |||||| || |||||||||| ||||| |||||||||    
T  7133254 tcggacacgcgtcggtgtccgacaccgacacaccacctatgattacactgaattatgtcattttctcaaattat 7133327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 32308155 - 32308105
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtcc 109  Q
    |||||||||||||||| ||||||||||| |||| ||||| |||||||||||    
T  32308155 tgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 9778503 - 9778462
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  9778503 tgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccg 9778462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 13585339 - 13585271
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    |||||||||||||||   |||||||||| | || ||||||||||||||||  | ||||||||||||||||||    
T  13585339 tgaattatgtgattt---caaattattagctgtgtcggcatgtcagtgtcaatatcgtgtctggtgtccgtg 13585271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 17851466 - 17851385
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| | ||||||||| ||||||||   |||| || ||| ||||||||| |||||||||||  |||||||    
T  17851466 tgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgtatccg 17851385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 22602734 - 22602815
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| |||||| |||  |||| ||||| |||||||| | |||||||||  |||| |||||| ||||||||    
T  22602734 tgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgcccgtgtccgtatccg 22602815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 25481937 - 25481856
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||| ||||| ||| ||||| | |||||||||  |||||||    
T  25481937 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtgtctgtatccg 25481856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 26329406 - 26329478
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||| |||| |||| ||||||||||| || | ||||| |||||||||| ||||||||||  ||||||||||    
T  26329406 tgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgtgt 26329478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 29787379 - 29787447
Alignment:
Q  45 acacatgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgt 113  Q
    |||||| ||| || |||||||||||||||| ||||||||||| |||| ||||| ||| | |||||||||    
T  29787379 acacataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgt 29787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 10042970 - 10042915
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgt 116  Q
    |||||||||| |||||||||||||||  ||| ||||| ||| ||||||||||||||    
T  10042970 aattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 11700853 - 11700806
Alignment:
Q  44 gacacatgatttcattgaattatgtgattttatcaaattattatcggt 91  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  11700853 gacacataattacattgaattatgtgattttgtcaaattattaacggt 11700806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 21828432 - 21828483
Alignment:
Q  62 attatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgt 113  Q
    ||||||||||||| |||||||| || |||| ||||| |||||||||||||||    
T  21828432 attatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Original strand, 2425759 - 2425817
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||| ||||||||||| ||||  |||| ||||||| || ||||||||||    
T  2425759 aattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtc 2425817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 20654454 - 20654532
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatcc 139  Q
    |||||| ||||||||||||||||  | || ||| ||| ||||||| ||||||| || ||||||||| |||| |||||||    
T  20654454 aattatatgattttatcaaattagcaacgttattggcgtgtcagtatccgtgttgtatctggtgtcggtgttcgtatcc 20654532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 23930302 - 23930225
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatc 88  Q
    |||||||||| ||||| |||||||||||||  ||||  |||||| || |||||||||| ||||| |||||||| ||||    
T  23930302 tcggacacgcatcggtatccgacaccgacacaacacctatgattacactgaattatgtcattttctcaaattactatc 23930225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 38134420 - 38134462
Alignment:
Q  49 atgatttcattgaattatgtgattttatcaaattattatcggt 91  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||    
T  38134420 atgattacattgaattatgtcattttctcaaattattatcggt 38134462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 43027496 - 43027562
Alignment:
Q  62 attatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccg 128  Q
    ||||||||||||| ||||||||||| | |  ||| | |||||||||||||||||||||  |||||||    
T  43027496 attatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccg 43027562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 1401060 - 1401007
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtg 112  Q
    |||||||||||| ||| ||||||||||| || |||| || ||||||||||||||    
T  1401060 tgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtg 1401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 6028663 - 6028582
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtat 137  Q
    |||| |||||||| || || ||||||||||| |  |||||   |||||||||| |||||||||||| ||||||||| |||||    
T  6028663 cattaaattatgttatattttcaaattattaaccatatcgatgtgtcagtgtctgtgtcgtgtctgatgtccgtgtccgtat 6028582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 13770726 - 13770657
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccg 128  Q
    |||||||||| ||||| | ||||||||| | || ||||| | ||||||||||||||||||| | ||||||    
T  13770726 tgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtccg 13770657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 18213100 - 18213137
Alignment:
Q  101 tcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  18213100 tcagtgtccgtgtcgtgtctggtgttcgtgttcgtatc 18213137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 21141006 - 21141087
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||| ||||||| | |||||||||  ||| ||| | |||| | |||||||||||||  ||||||||||| ||||||||    
T  21141006 tgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccgtatccg 21141087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 24105702 - 24105653
Alignment:
Q  70 attttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    ||||| ||||||||||| | || ||||| |||||||||||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 24105653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 22868077 - 22868017
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||||| ||| |||||||  ||| ||||| |||||||||| |||| |||||    
T  22868077 tgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtc 22868017  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 23191931 - 23191879
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgt 111  Q
    |||| ||||||||||| ||||||||||| |||| ||||| | |||||||||||    
T  23191931 tgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 38804531 - 38804622
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacac--atgatttcattgaattatgtgattttatcaaattattatcggtatcggcatgtc 102  Q
    |||||||| ||||||||||||||||| ||| |||||  |||||| |  || ||||||| ||||| | ||||||||||| || ||||| ||||    
T  38804531 tcggacacacgtcggtgtccgacaccaacacgacacctatgattaccctggattatgtcattttctgaaattattatccgtgtcggcgtgtc 38804622  T

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Target: scaffold0027 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 46717 - 46636
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||| ||||||||||||||| | ||||||||| ||||||||    
T  46717 tgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccg 46636  T

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Target: scaffold0021 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 130517 - 130437
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatcc 139  Q
    |||||||||||||||| ||||| ||||| | || ||||| ||||| ||||||||||||||| ||||||||||| |||||||    
T  130517 tgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatcc 130437  T

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Target: scaffold0053 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 8824 - 8753
Alignment:
Q  68 tgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatcc 139  Q
    ||||||| ||||||||||| | || ||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  8824 tgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatcc 8753  T

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Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 20207 - 20137
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||| ||||||||||||||| |||||||||    
T  20207 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 20137  T

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Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 241627 - 241558
Alignment:
Q  61 aattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtg 130  Q
    ||||||||||||||  |||||||||| | || ||||| ||||||||||||||||||||| ||||||||||    
T  241627 aattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtg 241558  T

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Target: scaffold0652 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 486 - 567
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||| ||||||||| ||||||||||| | || ||||| | |||||||||||| |||||  ||||||||||| ||||||||    
T  486 tgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccg 567  T

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Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 19657 - 19551
Alignment:
Q  13 tcggacacgcgtcggtgtccgacaccgacatgacacatg--atttcattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccg 110  Q
    ||||||||| |||| ||||| |||||||||| |||| ||  ||| || |||||||||||||||| |||||||||||   |||||||| |||||||||| |    
T  19657 tcggacacgtgtcg-tgtccaacaccgacataacacttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcag 19560  T
Q  111 tgtcgtgtc 119  Q
    |||||||||    
T  19559 tgtcgtgtc 19551  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 192274 - 192335
Alignment:
Q  60 gaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctg 121  Q
    ||||||||| ||||| ||||||||||| |||| ||||| ||||||||||||| |||||||||    
T  192274 gaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtctg 192335  T

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Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 178842 - 178910
Alignment:
Q  59 tgaattatg-tgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtc 126  Q
    ||||||||| ||||||| |||||||||||   || ||||| ||||||||||||||||||||| ||||||    
T  178842 tgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 178910  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 51846 - 51791
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||||||||| ||||||||||| | || ||||| ||||||||||||||||    
T  51846 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 263396 - 263475
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatc 138  Q
    ||||||||||| |||| ||||||||||| | || | | |||||||||||||||||||| ||  |||||||||| ||||||    
T  263396 tgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccgtatc 263475  T

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Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 13435 - 13365
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||| |||||||||||   || ||||| |||||||||||||||| | || |||||||||    
T  13435 tgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgt 13365  T

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Target: scaffold0152 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 21892 - 21962
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgt 129  Q
    |||||||||||||||| |||||||||||   || ||||| |||||||||||||||| | || |||||||||    
T  21892 tgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgt 21962  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 3873 - 3959
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtc-----cgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    |||||||||||||||| | ||||||||| | || ||||||| ||||||||     ||||||||||||||||||||||| | ||||||    
T  3873 tgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtcgtgtctggtgtccgtgtccatatccg 3959  T

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Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 15050 - 15009
Alignment:
Q  99 tgtcagtgtccgtgtcgtgtctggtgtccgtgtacgtatccg 140  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  15050 tgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtgtccg 15009  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 92842 - 92790
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgt 111  Q
    |||||||||| ||||| ||||||||||| |||| ||||| |||||||||||||    
T  92842 tgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

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Target: scaffold0598 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 8077 - 8132
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtc 114  Q
    |||||||||| ||||| ||||||||||||| |||||| | |||| |||||||||||    
T  8077 tgaattatgtcattttctcaaattattatccgtatcgacgtgtcggtgtccgtgtc 8132  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 53215 - 53147
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtctggtgtccgtgt 131  Q
    |||||||||||||||| ||||||||||  |||||||||| ||||||    ||||||||||| ||||| |||||    
T  53215 tgaattatgtgattttctcaaattattggcggtatcggcgtgtcag----cgtgtcgtgtccggtgttcgtgt 53147  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 23455 - 23395
Alignment:
Q  59 tgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtccgtgtcgtgtc 119  Q
    |||||||||||||||| |  | |||||||| || ||||| |||||||||| ||||||||||    
T  23455 tgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtc 23395  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 99931 - 99879
Alignment:
Q  56 cattgaattatgtgattttatcaaattattatcggtatcggcatgtcagtgtc 108  Q
    ||||||||||||| ||||| | |||||||||||||| ||| |||||| |||||    
T  99931 cattgaattatgttattttctaaaattattatcggtgtcgacatgtccgtgtc 99879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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