View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16694_high_7 (Length: 231)
Name: NF16694_high_7
Description: NF16694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16694_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 34318343 - 34318140
Alignment:
| Q |
14 |
ataatactctgacatctctatattctgcatgtcaaagttcatatcatagtattcaccttgtaacaagaacaaatttaagtcctcgtccaaaggtgttgaa |
113 |
Q |
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| T |
34318343 |
ataatactctgacatctctatattctgcatgtcaaagttcatatcatagtattcaccttgtaacaagaacaaatttaagtcctcgtccaaaggtgttgaa |
34318244 |
T |
|
| Q |
114 |
gctgactcaatacccaaaagtaagtttctttggtagatttccatatcagaagcgcagccaagattaaattttggtgtttttaaactcaaatttgaagtga |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34318243 |
gctgactcaatacccaaaagtaagtttctttggtagatttccatatcagaagcgcagccaagattaaattttggtgtttttaaactcaaatttgaagtga |
34318144 |
T |
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| Q |
214 |
aaat |
217 |
Q |
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|||| |
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| T |
34318143 |
aaat |
34318140 |
T |
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