View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16694_low_4 (Length: 315)

Name: NF16694_low_4
Description: NF16694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16694_low_4
NF16694_low_4
[»] chr2 (39 HSPs)
chr2 (1-132)||(30411718-30411849)
chr2 (1-124)||(29143001-29143124)
chr2 (1-132)||(17349396-17349530)
chr2 (1-132)||(25920306-25920435)
chr2 (129-281)||(19898610-19898761)
chr2 (1-131)||(25530487-25530617)
chr2 (1-131)||(27909036-27909178)
chr2 (1-132)||(17743394-17743535)
chr2 (1-113)||(25535314-25535425)
chr2 (85-131)||(17635692-17635738)
chr2 (85-131)||(17675546-17675592)
chr2 (1-132)||(26603277-26603409)
chr2 (21-131)||(28925581-28925703)
chr2 (1-61)||(9774334-9774394)
chr2 (2-110)||(24090877-24090984)
chr2 (1-61)||(25618596-25618656)
chr2 (1-61)||(45621880-45621940)
chr2 (1-61)||(29719230-29719290)
chr2 (1-56)||(15339278-15339333)
chr2 (88-131)||(25618694-25618737)
chr2 (5-60)||(25885460-25885515)
chr2 (1-59)||(21078627-21078685)
chr2 (1-79)||(31804882-31804959)
chr2 (87-132)||(15339375-15339420)
chr2 (88-121)||(23933472-23933505)
chr2 (1-78)||(25196050-25196127)
chr2 (88-121)||(25887831-25887864)
chr2 (88-121)||(32085602-32085635)
chr2 (1-61)||(12953293-12953353)
chr2 (88-132)||(13776476-13776520)
chr2 (1-65)||(26667358-26667422)
chr2 (92-131)||(45621799-45621838)
chr2 (87-121)||(17890075-17890109)
chr2 (88-121)||(11382680-11382713)
chr2 (87-124)||(29719157-29719194)
chr2 (88-121)||(45553268-45553301)
chr2 (1-85)||(17635751-17635834)
chr2 (1-45)||(20174650-20174694)
chr2 (88-120)||(29027635-29027667)
[»] chr4 (64 HSPs)
chr4 (129-311)||(17216477-17216657)
chr4 (135-302)||(10682076-10682243)
chr4 (135-302)||(10895716-10895883)
chr4 (135-270)||(10709399-10709534)
chr4 (135-270)||(10923169-10923304)
chr4 (135-302)||(10666832-10666998)
chr4 (135-302)||(10717328-10717493)
chr4 (135-302)||(10880977-10881143)
chr4 (135-302)||(10931098-10931263)
chr4 (1-132)||(13908894-13909036)
chr4 (3-131)||(15164809-15164947)
chr4 (1-132)||(19492629-19492759)
chr4 (135-302)||(22067707-22067873)
chr4 (136-285)||(10725411-10725560)
chr4 (136-285)||(10939180-10939329)
chr4 (1-132)||(16730317-16730458)
chr4 (129-282)||(10703310-10703463)
chr4 (129-282)||(10917080-10917233)
chr4 (129-270)||(17219073-17219210)
chr4 (1-132)||(13692598-13692728)
chr4 (1-85)||(7582337-7582421)
chr4 (1-59)||(19882680-19882738)
chr4 (154-282)||(10700376-10700504)
chr4 (154-282)||(10914146-10914274)
chr4 (87-131)||(17216957-17217001)
chr4 (1-132)||(17026261-17026391)
chr4 (1-62)||(21323873-21323934)
chr4 (1-61)||(17337134-17337194)
chr4 (1-60)||(11490572-11490631)
chr4 (2-60)||(12578266-12578324)
chr4 (1-59)||(20315040-20315098)
chr4 (218-282)||(10672442-10672506)
chr4 (218-282)||(10886082-10886146)
chr4 (1-61)||(13128873-13128933)
chr4 (1-65)||(17216857-17216921)
chr4 (88-132)||(17337052-17337096)
chr4 (88-132)||(19562092-19562136)
chr4 (219-287)||(22068763-22068831)
chr4 (1-112)||(25094608-25094716)
chr4 (88-131)||(9264923-9264966)
chr4 (5-59)||(25121227-25121281)
chr4 (1-50)||(9737514-9737563)
chr4 (88-121)||(17672141-17672174)
chr4 (88-121)||(17951223-17951256)
chr4 (88-121)||(17955075-17955108)
chr4 (145-238)||(22199552-22199645)
chr4 (210-282)||(10699664-10699736)
chr4 (210-282)||(10913434-10913506)
chr4 (1-132)||(25097875-25098003)
chr4 (92-131)||(17709896-17709935)
chr4 (91-121)||(12578193-12578223)
chr4 (91-121)||(14649036-14649066)
chr4 (1-59)||(19374814-19374872)
chr4 (1-47)||(24639467-24639513)
chr4 (83-121)||(25121153-25121191)
chr4 (88-121)||(5679344-5679377)
chr4 (91-132)||(19929592-19929632)
chr4 (88-121)||(26115832-26115865)
chr4 (88-132)||(7582435-7582479)
chr4 (4-60)||(11933461-11933517)
chr4 (1-45)||(13992891-13992935)
chr4 (1-45)||(19636601-19636645)
chr4 (142-185)||(22071053-22071097)
chr4 (95-131)||(24639379-24639415)
[»] chr7 (55 HSPs)
chr7 (1-131)||(11803120-11803250)
chr7 (1-131)||(13418574-13418703)
chr7 (1-132)||(16058950-16059080)
chr7 (5-131)||(1848145-1848282)
chr7 (1-131)||(17077168-17077297)
chr7 (2-108)||(13277544-13277650)
chr7 (1-82)||(13759838-13759919)
chr7 (5-116)||(4449024-4449134)
chr7 (1-124)||(6042500-6042624)
chr7 (1-82)||(39273153-39273234)
chr7 (1-132)||(3329574-3329717)
chr7 (1-65)||(2563857-2563921)
chr7 (1-85)||(8054465-8054548)
chr7 (1-85)||(8978981-8979065)
chr7 (1-61)||(9731626-9731686)
chr7 (1-61)||(11221163-11221223)
chr7 (1-132)||(17191131-17191260)
chr7 (1-59)||(9864327-9864385)
chr7 (1-59)||(18662481-18662539)
chr7 (1-62)||(17203063-17203124)
chr7 (1-45)||(5108605-5108649)
chr7 (1-61)||(7492262-7492322)
chr7 (88-124)||(8877559-8877595)
chr7 (1-61)||(16365745-16365805)
chr7 (88-131)||(20582394-20582437)
chr7 (1-60)||(31492970-31493029)
chr7 (1-43)||(10587041-10587083)
chr7 (54-132)||(13289336-13289413)
chr7 (87-124)||(2563955-2563992)
chr7 (88-121)||(7318412-7318445)
chr7 (88-121)||(14195899-14195932)
chr7 (4-60)||(1584586-1584642)
chr7 (1-45)||(18368995-18369039)
chr7 (1-45)||(23099967-23100011)
chr7 (8-59)||(5530068-5530119)
chr7 (88-119)||(10586953-10586984)
chr7 (88-131)||(10648717-10648759)
chr7 (1-43)||(8313412-8313454)
chr7 (88-121)||(140255-140288)
chr7 (88-121)||(1587821-1587854)
chr7 (88-121)||(3734735-3734768)
chr7 (91-124)||(5108706-5108739)
chr7 (1-42)||(7318313-7318354)
chr7 (88-121)||(7492190-7492223)
chr7 (2-85)||(8054037-8054116)
chr7 (92-121)||(8293968-8293997)
chr7 (88-121)||(8313319-8313352)
chr7 (2-59)||(9500485-9500542)
chr7 (88-121)||(18662579-18662612)
chr7 (1-61)||(4785876-4785936)
chr7 (1-61)||(4818876-4818936)
chr7 (3-59)||(6005878-6005934)
chr7 (88-132)||(8978923-8978967)
chr7 (89-121)||(18368906-18368938)
chr7 (7-59)||(18449288-18449340)
[»] chr1 (35 HSPs)
chr1 (1-131)||(29242559-29242688)
chr1 (1-132)||(21449129-21449259)
chr1 (1-124)||(18736177-18736299)
chr1 (7-131)||(18830527-18830651)
chr1 (1-132)||(21987911-21988041)
chr1 (1-131)||(24054019-24054148)
chr1 (1-132)||(17610173-17610315)
chr1 (1-132)||(16916863-16916992)
chr1 (1-131)||(727507-727637)
chr1 (17-131)||(16069479-16069594)
chr1 (5-131)||(18825699-18825825)
chr1 (1-85)||(12208641-12208724)
chr1 (2-106)||(23179839-23179941)
chr1 (5-132)||(25405547-25405685)
chr1 (1-131)||(9401545-9401687)
chr1 (1-85)||(15543942-15544025)
chr1 (1-85)||(21666584-21666667)
chr1 (2-81)||(14779606-14779684)
chr1 (1-132)||(14781783-14781912)
chr1 (87-132)||(31235966-31236011)
chr1 (1-124)||(16179047-16179180)
chr1 (1-61)||(51473875-51473935)
chr1 (1-59)||(13345337-13345395)
chr1 (1-62)||(16787724-16787785)
chr1 (1-45)||(21847673-21847717)
chr1 (88-131)||(18100931-18100973)
chr1 (85-131)||(12208737-12208783)
chr1 (88-118)||(32382938-32382968)
chr1 (2-59)||(3591654-3591711)
chr1 (87-132)||(15543884-15543929)
chr1 (88-121)||(15807947-15807980)
chr1 (91-131)||(18529109-18529149)
chr1 (5-85)||(21334695-21334774)
chr1 (4-60)||(23038012-23038068)
chr1 (4-40)||(44795411-44795447)
[»] chr8 (27 HSPs)
chr8 (1-132)||(17101822-17101952)
chr8 (1-131)||(24114201-24114341)
chr8 (1-132)||(27659485-27659617)
chr8 (1-82)||(29382339-29382420)
chr8 (1-131)||(23893131-23893260)
chr8 (1-116)||(16403952-16404067)
chr8 (1-81)||(24269637-24269717)
chr8 (52-123)||(19264133-19264204)
chr8 (2-131)||(18569107-18569236)
chr8 (2-85)||(18448518-18448600)
chr8 (4-82)||(25226179-25226257)
chr8 (4-60)||(6885000-6885056)
chr8 (1-60)||(13697895-13697954)
chr8 (92-132)||(19786874-19786913)
chr8 (1-60)||(2637638-2637697)
chr8 (5-60)||(13314992-13315047)
chr8 (1-60)||(14528189-14528248)
chr8 (21-60)||(30806492-30806531)
chr8 (1-59)||(14075634-14075692)
chr8 (88-121)||(13697994-13698027)
chr8 (1-58)||(15238839-15238896)
chr8 (88-121)||(25182355-25182388)
chr8 (91-128)||(25226277-25226314)
chr8 (88-132)||(17509383-17509427)
chr8 (1-45)||(24904673-24904717)
chr8 (88-120)||(29382290-29382322)
chr8 (88-132)||(44010941-44010984)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-131)||(21316-21446)
scaffold0056 (4-131)||(25029-25156)
[»] chr6 (42 HSPs)
chr6 (23-124)||(25781852-25781952)
chr6 (1-116)||(11135947-11136062)
chr6 (21-131)||(21841617-21841727)
chr6 (1-131)||(23009325-23009453)
chr6 (1-131)||(23778911-23779039)
chr6 (1-131)||(22412979-22413108)
chr6 (1-85)||(9516825-9516908)
chr6 (4-131)||(24657386-24657511)
chr6 (1-85)||(23844441-23844524)
chr6 (1-59)||(9726062-9726120)
chr6 (6-131)||(22813638-22813763)
chr6 (23-82)||(23231961-23232020)
chr6 (1-132)||(27737605-27737748)
chr6 (1-82)||(5624680-5624762)
chr6 (2-85)||(17827070-17827150)
chr6 (1-62)||(23645765-23645826)
chr6 (95-131)||(17382214-17382250)
chr6 (1-61)||(22410326-22410386)
chr6 (1-45)||(23143762-23143806)
chr6 (1-60)||(15466409-15466468)
chr6 (1-60)||(28933660-28933719)
chr6 (1-59)||(17299832-17299890)
chr6 (88-122)||(22410255-22410289)
chr6 (88-121)||(28933587-28933620)
chr6 (17-81)||(14636923-14636987)
chr6 (1-65)||(17883780-17883844)
chr6 (88-132)||(20005835-20005879)
chr6 (87-131)||(23844382-23844426)
chr6 (2-62)||(24252227-24252287)
chr6 (88-131)||(23645685-23645727)
chr6 (92-122)||(24252156-24252186)
chr6 (85-131)||(24475191-24475237)
chr6 (88-121)||(8241414-8241447)
chr6 (88-121)||(15466509-15466542)
chr6 (1-50)||(17729192-17729241)
chr6 (88-133)||(20145038-20145083)
chr6 (92-121)||(21907577-21907606)
chr6 (88-133)||(22187756-22187801)
chr6 (88-121)||(25927232-25927265)
chr6 (91-124)||(27124419-27124452)
chr6 (1-45)||(21672450-21672494)
chr6 (1-45)||(21679866-21679910)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-116)||(3571-3686)
[»] chr5 (31 HSPs)
chr5 (1-116)||(23388782-23388897)
chr5 (1-121)||(15375823-15375941)
chr5 (1-132)||(20564009-20564139)
chr5 (4-123)||(19004153-19004282)
chr5 (1-131)||(20315347-20315489)
chr5 (1-132)||(16523720-16523849)
chr5 (1-131)||(28664814-28664943)
chr5 (1-65)||(24245539-24245603)
chr5 (1-112)||(20858725-20858835)
chr5 (29-131)||(20744587-20744699)
chr5 (1-131)||(17431923-17432064)
chr5 (1-62)||(36175173-36175234)
chr5 (5-116)||(17315045-17315155)
chr5 (1-64)||(20549700-20549763)
chr5 (8-82)||(39434509-39434583)
chr5 (91-132)||(18937889-18937929)
chr5 (88-121)||(24260655-24260688)
chr5 (1-45)||(17185503-17185547)
chr5 (1-45)||(18208264-18208308)
chr5 (1-61)||(24140482-24140542)
chr5 (1-45)||(25550519-25550563)
chr5 (1-60)||(19283855-19283914)
chr5 (1-60)||(25402337-25402396)
chr5 (1-60)||(34487677-34487736)
chr5 (91-121)||(22755664-22755694)
chr5 (88-130)||(34487777-34487818)
chr5 (5-62)||(24260560-24260617)
chr5 (21-62)||(26120924-26120965)
chr5 (1-61)||(15690817-15690877)
chr5 (85-121)||(18208176-18208212)
chr5 (1-45)||(22755561-22755605)
[»] chr3 (40 HSPs)
chr3 (1-132)||(16229871-16230001)
chr3 (5-131)||(8765161-8765287)
chr3 (5-131)||(8770063-8770189)
chr3 (1-131)||(17438348-17438490)
chr3 (1-109)||(22349449-22349556)
chr3 (2-124)||(12754848-12754970)
chr3 (1-82)||(12411191-12411272)
chr3 (5-116)||(20023485-20023595)
chr3 (21-92)||(19171803-19171873)
chr3 (1-124)||(21301958-21302093)
chr3 (1-82)||(8889130-8889211)
chr3 (3-112)||(19576158-19576265)
chr3 (1-60)||(12805890-12805949)
chr3 (1-107)||(19909915-19910019)
chr3 (2-110)||(19167452-19167557)
chr3 (2-82)||(932783-932863)
chr3 (4-60)||(3116419-3116475)
chr3 (1-81)||(19925602-19925682)
chr3 (88-131)||(4650364-4650407)
chr3 (1-59)||(8557130-8557188)
chr3 (5-58)||(4650275-4650328)
chr3 (88-121)||(17155931-17155964)
chr3 (88-121)||(21303281-21303314)
chr3 (2-59)||(31286017-31286073)
chr3 (91-131)||(932884-932924)
chr3 (1-132)||(27413814-27413941)
chr3 (1-61)||(41508407-41508467)
chr3 (88-119)||(3116349-3116380)
chr3 (78-133)||(8883039-8883094)
chr3 (1-79)||(20429750-20429826)
chr3 (88-123)||(20429849-20429884)
chr3 (5-60)||(21325384-21325439)
chr3 (5-82)||(19908351-19908429)
chr3 (1-59)||(21825870-21825928)
chr3 (4-61)||(7495094-7495151)
chr3 (88-121)||(10745040-10745073)
chr3 (88-121)||(16245657-16245690)
chr3 (88-121)||(21325480-21325513)
chr3 (92-132)||(5508477-5508516)
chr3 (95-131)||(19925540-19925576)
[»] scaffold0671 (1 HSPs)
scaffold0671 (1-131)||(482-612)
[»] scaffold0638 (1 HSPs)
scaffold0638 (1-132)||(739-882)
[»] scaffold0035 (2 HSPs)
scaffold0035 (5-132)||(69957-70094)
scaffold0035 (52-115)||(98719-98779)
[»] scaffold0008 (1 HSPs)
scaffold0008 (5-110)||(234385-234490)
[»] scaffold1869 (1 HSPs)
scaffold1869 (1-45)||(404-448)
[»] scaffold0054 (1 HSPs)
scaffold0054 (88-133)||(72148-72193)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-132)||(76458-76586)
[»] scaffold0622 (1 HSPs)
scaffold0622 (1-44)||(768-811)
[»] scaffold0001 (1 HSPs)
scaffold0001 (88-134)||(69218-69264)
[»] scaffold0386 (2 HSPs)
scaffold0386 (55-132)||(6022-6098)
scaffold0386 (1-132)||(6632-6762)
[»] scaffold0062 (1 HSPs)
scaffold0062 (88-121)||(43154-43187)
[»] scaffold0024 (1 HSPs)
scaffold0024 (88-121)||(39724-39757)
[»] scaffold0427 (1 HSPs)
scaffold0427 (4-60)||(2818-2874)
[»] scaffold0650 (1 HSPs)
scaffold0650 (5-59)||(6331-6385)
[»] scaffold0102 (1 HSPs)
scaffold0102 (2-60)||(35578-35636)
[»] scaffold0005 (1 HSPs)
scaffold0005 (91-121)||(168226-168256)


Alignment Details
Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 30411718 - 30411849
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  30411718 gtagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttatttttgtaattttgacagtataaaagataggttgcaatttttat 30411817  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||||||||||||||||    
T  30411818 ctgtttgcaacagagcaagtttacatgttttt 30411849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 29143001 - 29143124
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||| |||||| ||| ||||||||  ||||| | ||||||| |||| |||||||||||||| ||||||| |||||||| |  ||||||||||||||    
T  29143001 gtagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttatttttgtaagtttgacggtataaaagtttagttgcaatttttat 29143100  T
Q  101 ctgtttgcaacagagcaagtttac 124  Q
    ||||||||||||||||||||||||    
T  29143101 ctgtttgcaacagagcaagtttac 29143124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 17349396 - 17349530
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa---aagata--ggttgcaatt 95  Q
    ||||||||||||||| |||  ||||||||||||||||||||| || |||| ||||||||| |||| || ||||||||||   ||||||  ||||||||||    
T  17349396 gtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttatttt-gtaagtt-gacgatataataaaagataagggttgcaatt 17349493  T
Q  96 tttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17349494 tttatctgtttgcaacagagcaagtttacttgttttt 17349530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 25920306 - 25920435
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||  ||| ||||||||||||||  |||||  |||||||| || ||||||||||||||    
T  25920306 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttatttttgtaa-gttgacattataaaagtta-gttgcaatttttat 25920403  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||| | ||||| |||||||    
T  25920404 ctgtttgcaacagagcgattttacctgttttt 25920435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 281
Target Start/End: Complemental strand, 19898761 - 19898610
Alignment:
Q  129 ttttacgatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattca 228  Q
    ||||| |||||||| ||||||||||||||| |||||||| ||||||||| ||||| ||||| |||   || |||||||  |||||||| ||||||||| |    
T  19898761 ttttatgatagacttaaagataaataaaaattataatgatctttcatgaatgtcatagatt-ttactagccatgtttgttaaggttaagtaatcaattga 19898663  T
Q  229 gtgatgtaaatagataaacttgattaattgattagacatattgttattaattt 281  Q
     ||||||||| |||| || || | | ||||||||||||||||  |||||||||    
T  19898662 ttgatgtaaagagatcaatttaacttattgattagacatattagtattaattt 19898610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 25530487 - 25530617
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaattttta 99  Q
    ||||||||||||||| |||||||||||| ||||||||  | ||||  | | |||||||||||| | |||||| | |||||||| || |||||||||||||    
T  25530487 gtagagtatcgtatccacagggattgtcctttcgtccgtaaaattctcattacttatttttgtgagttttgatggtataaaag-taagttgcaattttta 25530585  T
Q  100 tctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||||||| | ||||| ||||||    
T  25530586 tctgtttgcaacagagcgaatttacctgtttt 25530617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 27909178 - 27909036
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat------------aggt 88  Q
    ||||||||||||||| ||| || || | ||||| |||||||||||  ||| |||||||||||||| |||||||||||||||| |            | ||    
T  27909178 gtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttatttttgtaagtttgacgatataaaagttaaaagggttagaacgt 27909079  T
Q  89 tgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  27909078 tgcaatttttatctgtttgcaacagagcaagtttacctgtttt 27909036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17743535 - 17743394
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata----------ggttg 90  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| | || ||||||||||| || ||| |||||||||||| ||           ||||    
T  17743535 gtagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttatttttgcaagtttaacgatataaaagttaagggttagagagttg 17743436  T
Q  91 caatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||| ||||||||  ||||||||||| |||||||    
T  17743435 caatttttatctttttgcaactaagcaagtttacctgttttt 17743394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25535314 - 25535425
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgt-aattttgacgatataaaagataggttgcaattttta 99  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||   || |||||||||||| || ||||||| | |||||| || |||||||||||||    
T  25535314 gtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttgtgaactttgacggt-taaaag-taagttgcaattttta 25535411  T
Q  100 tctgtttgcaacag 113  Q
    ||| ||||||||||    
T  25535412 tctatttgcaacag 25535425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 17635738 - 17635692
Alignment:
Q  85 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  17635738 aggttgcaatttttatctgtttgcaacagagcaagtttacctgtttt 17635692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 17675592 - 17675546
Alignment:
Q  85 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  17675592 aggttgcaatttttatctgtttgcaacagagcaagtttacctgtttt 17675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 26603409 - 26603277
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatat---aaaagatag--gttgcaatt 95  Q
    ||||||||||||||  | | |||||||| |||||| |||||||||  ||| |||||||||||    ||||||| |||   |||||||||  |||||||||    
T  26603409 gtagagtatcgtatttatatggattgtcttttcgtgcaaacaattgacgttacttatttttgg---tttgacggtatgataaaagatagatgttgcaatt 26603313  T
Q  96 tttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  26603312 tttatctgtttgcaacagagc-agtttacctgttttt 26603277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 28925581 - 28925703
Alignment:
Q  21 ggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat------------aggttgcaatttttatctgtttgc 108  Q
    |||||||||||||||||||||||||   || | |||||||||||| ||||||||||||||||||            || ||||||||||||| |||||||    
T  28925581 ggattgtcgtttcgtccaaacaattcatgttatttatttttgtaagtttgacgatataaaagataaagggttagaaagcttgcaatttttatttgtttgc 28925680  T
Q  109 aacagagcaagtttacatgtttt 131  Q
    |||| ||||||||||| ||||||    
T  28925681 aacatagcaagtttacctgtttt 28925703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9774394 - 9774334
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||||||| ||| |||||||||||| |||||| |||||||||| ||||||||||    
T  9774394 gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttattttt 9774334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 24090984 - 24090877
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatc 101  Q
    |||| ||||||||| ||| |||||||| ||||||||||||||||   || |||||||||||||| ||||||| |||||||   | ||||||||||||||     
T  24090984 tagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttatttttgtaagtttgacggtataaaa-tgaagttgcaatttttata 24090886  T
Q  102 tgtttgcaa 110  Q
    | |||||||    
T  24090885 tttttgcaa 24090877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25618596 - 25618656
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    |||||||||| |||| ||| |||||||||||||||| |||||||| |||||||||||||||    
T  25618596 gtagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgtaacttattttt 25618656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45621940 - 45621880
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| | || ||||||||||    
T  45621940 gtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttattttt 45621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29719290 - 29719230
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||| ||||||||| ||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  29719290 gtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgttacttattttt 29719230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15339278 - 15339333
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactta 56  Q
    |||||||||| |||| ||| ||||||||||||||||||||||||| |||| |||||    
T  15339278 gtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgttactta 15339333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 25618694 - 25618737
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  25618694 ttgcaatttttatctgtttgcaacagagaaagtttacctgtttt 25618737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 25885515 - 25885460
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||| ||| | ||||||||||||||||||||||||| || |||||||||    
T  25885515 agtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttatttt 25885460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21078685 - 21078627
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||| |||  |||||||    
T  21078685 gtagagtatcgcatccacaaggattgtcgtttcgtccaaacaatttacgttgcttattt 21078627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31804959 - 31804882
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa 79  Q
    ||||||||| ||||| |||| ||||| |||||||||||| |||| || || ||||||||||||||  ||||||||||||    
T  31804959 gtagagtattgtatccacagagattgccgtttcgtccaaccaatctgtgttacttatttttgtaa-gttgacgatataa 31804882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 15339375 - 15339420
Alignment:
Q  87 gttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||    
T  15339375 gttgcaatttttatttgtttgcaacagagcaagtttatctgttttt 15339420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 23933505 - 23933472
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  23933505 ttgcaatttttatctgtttgcaacagagcaagtt 23933472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25196050 - 25196127
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatata 78  Q
    |||||||||| |||| |||||| ||||| ||||||||||||||||  ||| |||||||||| | |  |||||||||||    
T  25196050 gtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttatttttattaagttgacgatata 25196127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 25887864 - 25887831
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  25887864 ttgcaatttttatctgtttgcaacagagcaagtt 25887831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 32085602 - 32085635
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  32085602 ttgcaatttttatctgtttgcaacagagcaagtt 32085635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12953353 - 12953293
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||| || || ||| |||||||||||||||| |||||||| |||| ||||||||||    
T  12953353 gtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttacttattttt 12953293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 13776476 - 13776520
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||    
T  13776476 ttgcaatttttatctgtttgcaacagagtaagattacctgttttt 13776520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26667358 - 26667422
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa 65  Q
    ||||||||||||||| ||||||||| || |||||| | |||||||  ||| ||||||||||||||    
T  26667358 gtagagtatcgtatccacagggattttcctttcgtacgaacaattctcgttacttatttttgtaa 26667422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 45621838 - 45621799
Alignment:
Q  92 aatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  45621838 aatttttatctgtttgcaacatagcaagtttacttgtttt 45621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 17890075 - 17890109
Alignment:
Q  87 gttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||||| ||||||||||||||||||||    
T  17890075 gttgcaatttttatatgtttgcaacagagcaagtt 17890109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 11382713 - 11382680
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||||| |||||||||||||||||||||||||||    
T  11382713 ttgcaaattttatctgtttgcaacagagcaagtt 11382680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 29719194 - 29719157
Alignment:
Q  87 gttgcaatttttatctgtttgcaacagagcaagtttac 124  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  29719194 gttgcaatttttatatgtatgcaacagagcaagtttac 29719157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 45553268 - 45553301
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||| ||||||||    
T  45553268 ttgcaatttttatctgtttgcaacatagcaagtt 45553301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 17635834 - 17635751
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    |||||| ||| |||| |||| ||||||||||||||| ||| || |  ||| ||||||||||||||  |||||||| |||||||||    
T  17635834 gtagagaatcatatccacagagattgtcgtttcgtcaaaaaaactcacgttacttatttttgtaa-gttgacgatgtaaaagata 17635751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20174694 - 20174650
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    |||||||||| | || ||| |||||||||||||||||||||||||    
T  20174694 gtagagtatcatttccacatggattgtcgtttcgtccaaacaatt 20174650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 29027635 - 29027667
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagt 120  Q
    ||||||||||||||||||||||| |||||||||    
T  29027635 ttgcaatttttatctgtttgcaagagagcaagt 29027667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 5e-56; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 129 - 311
Target Start/End: Original strand, 17216477 - 17216657
Alignment:
Q  129 ttttacgatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattca 228  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |   ||||||||||| |||||||| ||||||||| |    
T  17216477 ttttacgatatactaaaagataaataaaaactataatgaactttcatgattgtcaaacattctaata-gcgatgtttgctaaggttaagtaatcaattga 17216575  T
Q  229 gtgatgtaaatagataaacttgattaattgattagacatattgttattaatttcaaaatattattattgacttcatgtcactc 311  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||||||||| |||| |||||||||||||| || |||||    
T  17216576 gtgatgtaaatagataaacttgattaattgatcagacatattagtattaatttc-aaattttattattgacttcttgccactc 17216657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 135 - 302
Target Start/End: Complemental strand, 10682243 - 10682076
Alignment:
Q  135 gatagactaaaagataaataaaaa-ctataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgat 233  Q
    |||||||| ||||||||||||||| |||||||||| |||||| ||||| ||||||| |||   ||||||||||| |||||||| ||||||||| ||||||    
T  10682243 gatagactcaaagataaataaaaaactataatgaattttcattattgtgaaagatttttaatagcgatgtttgctaaggttaagtaatcaattgagtgat 10682144  T
Q  234 gtaaatagataaacttgattaattgattagacatattgttattaatttcaaaatattattattgacttc 302  Q
    | ||| |||||||||||||| ||| ||||||||||||  |||||||||| |||| |||||| |||||||    
T  10682143 gcaaagagataaacttgatttattaattagacatattagtattaatttc-aaattttattaatgacttc 10682076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 135 - 302
Target Start/End: Complemental strand, 10895883 - 10895716
Alignment:
Q  135 gatagactaaaagataaataaaaa-ctataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgat 233  Q
    |||||||| ||||||||||||||| |||||||||| |||||| ||||| ||||||| |||   ||||||||||| |||||||| ||||||||| ||||||    
T  10895883 gatagactcaaagataaataaaaaactataatgaattttcattattgtgaaagatttttaatagcgatgtttgctaaggttaagtaatcaattgagtgat 10895784  T
Q  234 gtaaatagataaacttgattaattgattagacatattgttattaatttcaaaatattattattgacttc 302  Q
    | ||| |||||||||||||| ||| ||||||||||||  |||||||||| |||| |||||| |||||||    
T  10895783 gcaaagagataaacttgatttattaattagacatattagtattaatttc-aaattttattaatgacttc 10895716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 10709399 - 10709534
Alignment:
Q  135 gatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatg 234  Q
    |||||||| |||||||||||||||||||||||||||||||| | | ||||||||| |||   || |||||||| |||||||| ||||||||| |||||||    
T  10709399 gatagactcaaagataaataaaaactataatgaactttcattactctcaaagatttttaatagcaatgtttgctaaggttaagtaatcaattgagtgatg 10709498  T
Q  235 taaatagataaacttgattaattgattagacatatt 270  Q
    |||| ||||||| |||||| ||||||||||||||||    
T  10709499 taaagagataaatttgatttattgattagacatatt 10709534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 10923169 - 10923304
Alignment:
Q  135 gatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatg 234  Q
    |||||||| |||||||||||||||||||||||||||||||| | | ||||||||| |||   || |||||||| |||||||| ||||||||| |||||||    
T  10923169 gatagactcaaagataaataaaaactataatgaactttcattactctcaaagatttttaatagcaatgtttgctaaggttaagtaatcaattgagtgatg 10923268  T
Q  235 taaatagataaacttgattaattgattagacatatt 270  Q
    |||| ||||||| |||||| ||||||||||||||||    
T  10923269 taaagagataaatttgatttattgattagacatatt 10923304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 302
Target Start/End: Complemental strand, 10666998 - 10666832
Alignment:
Q  135 gatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatg 234  Q
    |||||||| ||||||||||| ||||||||||||||||||||   | ||||||||| |||   || |||||||| |||||||| ||||||||| |||||||    
T  10666998 gatagactcaaagataaatagaaactataatgaactttcatttatctcaaagatttttaatagcaatgtttgctaaggttaagtaatcaattgagtgatg 10666899  T
Q  235 taaatagataaacttgattaattgattagacatattgttattaatttcaaaatattattattgacttc 302  Q
    |||| ||||| | |||||| ||||||||||||||||  |||||||||| |||| |||||| |||||||    
T  10666898 taaagagatatatttgatttattgattagacatattagtattaatttc-aaattttattaatgacttc 10666832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 302
Target Start/End: Complemental strand, 10717493 - 10717328
Alignment:
Q  135 gatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatg 234  Q
    |||||||| |||||||||||||||||||||||| |||| || ||||||||||||| |||    |||||||||| |||||||| ||||| ||| |||||||    
T  10717493 gatagactcaaagataaataaaaactataatgagcttttattattgtcaaagatttttaataacgatgtttgctaaggttaagtaatc-attgagtgatg 10717395  T
Q  235 taaatagataaacttgattaattgattagacatattgttattaatttcaaaatattattattgacttc 302  Q
    ||||  ||||||||| ||| ||||||||||||||||  |||||||||| |||| |||||| |||||||    
T  10717394 taaagggataaacttcatttattgattagacatattagtattaatttc-aaattttattaatgacttc 10717328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 302
Target Start/End: Complemental strand, 10881143 - 10880977
Alignment:
Q  135 gatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatg 234  Q
    |||||||| ||||||||||| ||||||||||||||||||||   | ||||||||| |||   || |||||||| |||||||| ||||||||| |||||||    
T  10881143 gatagactcaaagataaatagaaactataatgaactttcatttatctcaaagatttttaatagcaatgtttgctaaggttaagtaatcaattgagtgatg 10881044  T
Q  235 taaatagataaacttgattaattgattagacatattgttattaatttcaaaatattattattgacttc 302  Q
    |||| ||||| | |||||| ||||||||||||||||  |||||||||| |||| |||||| |||||||    
T  10881043 taaagagatatatttgatttattgattagacatattagtattaatttc-aaattttattaatgacttc 10880977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 302
Target Start/End: Complemental strand, 10931263 - 10931098
Alignment:
Q  135 gatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatg 234  Q
    |||||||| |||||||||||||||||||||||| |||| || ||||||||||||| |||    |||||||||| |||||||| ||||| ||| |||||||    
T  10931263 gatagactcaaagataaataaaaactataatgagcttttattattgtcaaagatttttaataacgatgtttgctaaggttaagtaatc-attgagtgatg 10931165  T
Q  235 taaatagataaacttgattaattgattagacatattgttattaatttcaaaatattattattgacttc 302  Q
    ||||  ||||||||| ||| ||||||||||||||||  |||||||||| |||| |||||| |||||||    
T  10931164 taaagggataaacttcatttattgattagacatattagtattaatttc-aaattttattaatgacttc 10931098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 13908894 - 13909036
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag-atagg----------tt 89  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| | |||          ||    
T  13908894 gtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttttgtaattttgacgatataaaagtaaaggttagaaagtctt 13908993  T
Q  90 gcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  13908994 gcaatttttatctgtttgcaacagagcaagtttacctgttttt 13909036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 15164809 - 15164947
Alignment:
Q  3 agagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata----------ggttgca 92  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||           ||||||    
T  15164809 agagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttatttttgtaagtttgacgatataaaagttaagggttagagagttgca 15164908  T
Q  93 atttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  15164909 atttttatttgtttgcaacagagcaagtttacctgtttt 15164947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 19492759 - 19492629
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| | ||||||||||| ||||||||||| |||| |||||||||||||  || ||| ||||||||| ||||||||||| |||||    
T  19492759 gtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttatttttgtaggtt-gacaatataaaagttaggttgcaatatttat 19492661  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
     ||||||||||| |||||||||||||||||||    
T  19492660 ttgtttgcaacacagcaagtttacatgttttt 19492629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 302
Target Start/End: Complemental strand, 22067873 - 22067707
Alignment:
Q  135 gatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatg 234  Q
    |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| |||   ||| ||||||  |||||||| ||||||||  ||||||     
T  22067873 gatagactaaaacataaataaaaactataatgaacttttatgactgtcaaagatttttattagcggtgtttgttaaggttaagtaatcaatggagtgata 22067774  T
Q  235 taaatagataaacttgattaattgattagacatattgttattaatttcaaaatattattattgacttc 302  Q
    |||| |||||||||||| | ||||||||||||||||   |||||||| ||||| |||||| |||||||    
T  22067773 taaagagataaacttgacttattgattagacatattagcattaattt-aaaattttattaatgacttc 22067707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 285
Target Start/End: Complemental strand, 10725560 - 10725411
Alignment:
Q  136 atagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatgt 235  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||||| |||   ||||||||| | | |||||| |||||| |  ||| |||     
T  10725560 atagactaaaagataaataaaaactatactggactttcatgattgttaaagatttttaatagcgatgtttcctatggttaagtaatcattagagttatgc 10725461  T
Q  236 aaatagataaacttgattaattgattagacatattgttattaatttcaaa 285  Q
    ||| |||||||||||| ||||||||||||||||||  |||||||||||||    
T  10725460 aaagagataaacttgaataattgattagacatattaatattaatttcaaa 10725411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 285
Target Start/End: Complemental strand, 10939329 - 10939180
Alignment:
Q  136 atagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatgt 235  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||||| |||   ||||||||| | | |||||| |||||| |  ||| |||     
T  10939329 atagactaaaagataaataaaaactatactggactttcatgattgttaaagatttttaatagcgatgtttcctatggttaagtaatcattagagttatgc 10939230  T
Q  236 aaatagataaacttgattaattgattagacatattgttattaatttcaaa 285  Q
    ||| |||||||||||| ||||||||||||||||||  |||||||||||||    
T  10939229 aaagagataaacttgaataattgattagacatattaatattaatttcaaa 10939180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16730458 - 16730317
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat----------aggttg 90  Q
    ||||||||||||||| | | ||||| ||||||||||||||||| | |||| |||||||||||||| |||||| ||||||||| |          | ||||    
T  16730458 gtagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttatttttgtaagtttgacaatataaaagttaagggttagaaagttg 16730359  T
Q  91 caatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  16730358 caatttttatctgtttgcaacagagcaagtttacctgttttt 16730317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 282
Target Start/End: Original strand, 10703310 - 10703463
Alignment:
Q  129 ttttacgatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattca 228  Q
    ||||| |||||||| ||| |||| |||||||||||||||| ||| || | ||||||||||| |||   ||||||||||| ||  |||| ||||||||| |    
T  10703310 ttttaggatagactcaaaaataattaaaaactataatgaagttttattagtgtcaaagatttttaatcgcgatgtttgctaaaattaagtaatcaattga 10703409  T
Q  229 gtgatgtaaatagataaacttgattaattgattagacatattgttattaatttc 282  Q
    |||||||||| |||||||||  ||| |||||||||| |||||  ||||||||||    
T  10703410 gtgatgtaaagagataaactccatttattgattagatatattagtattaatttc 10703463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 282
Target Start/End: Original strand, 10917080 - 10917233
Alignment:
Q  129 ttttacgatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattca 228  Q
    ||||| |||||||| ||| |||| |||||||||||||||| ||| || | ||||||||||| |||   ||||||||||| ||  |||| ||||||||| |    
T  10917080 ttttaggatagactcaaaaataattaaaaactataatgaagttttattagtgtcaaagatttttaatcgcgatgtttgctaaaattaagtaatcaattga 10917179  T
Q  229 gtgatgtaaatagataaacttgattaattgattagacatattgttattaatttc 282  Q
    |||||||||| |||||||||  ||| |||||||||| |||||  ||||||||||    
T  10917180 gtgatgtaaagagataaactccatttattgattagatatattagtattaatttc 10917233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 129 - 270
Target Start/End: Original strand, 17219073 - 17219210
Alignment:
Q  129 ttttacgatagactaaaagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattca 228  Q
    ||||| ||||||||||||||||||    | ||||||||||||||||||||||||||| ||| |||   |  |||||||| |||||||||||||||||| |    
T  17219073 ttttatgatagactaaaagataaa----atctataatgaactttcatgattgtcaaatatttttaatagaaatgtttgctaaggttaaataatcaattga 17219168  T
Q  229 gtgatgtaaatagataaacttgattaattgattagacatatt 270  Q
    |||||||||| ||||| |||| | | || |||||||||||||    
T  17219169 gtgatgtaaagagatacacttaacttatagattagacatatt 17219210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13692728 - 13692598
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||| |||| ||| |||||||||||||| |||||||||| | || |||||||||||| |  |||| | ||||||| ||||||||||||||||||    
T  13692728 gtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttacttatttttgt-aggttgaaggtataaaatataggttgcaatttttat 13692630  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
      ||||| || ||||||||||||| |||||||    
T  13692629 tagtttgtaaaagagcaagtttacctgttttt 13692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 7582337 - 7582421
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    |||||||||| |||| ||| ||||||| |||||||||||||||| ||| | ||||||||| |||| |||||||||||||||||||    
T  7582337 gtagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttattttggtaagtttgacgatataaaagata 7582421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19882680 - 19882738
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  19882680 gtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 10700376 - 10700504
Alignment:
Q  154 aaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatgtaaatagataaacttgatt 253  Q
    ||||||||||||||| ||| || | ||||||||||| |||   || || ||  | |||||||| ||||||||| || |||||||| |||||||||||| |    
T  10700376 aaaaactataatgaagttttattactgtcaaagatttttaatcgccatattctctaaggttaagtaatcaattgagagatgtaaagagataaacttgaat 10700475  T
Q  254 aattgattagacatattgttattaatttc 282  Q
     ||||||||||||||||  ||||||||||    
T  10700476 tattgattagacatattagtattaatttc 10700504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 282
Target Start/End: Original strand, 10914146 - 10914274
Alignment:
Q  154 aaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatgtaaatagataaacttgatt 253  Q
    ||||||||||||||| ||| || | ||||||||||| |||   || || ||  | |||||||| ||||||||| || |||||||| |||||||||||| |    
T  10914146 aaaaactataatgaagttttattactgtcaaagatttttaatcgccatattctctaaggttaagtaatcaattgagagatgtaaagagataaacttgaat 10914245  T
Q  254 aattgattagacatattgttattaatttc 282  Q
     ||||||||||||||||  ||||||||||    
T  10914246 tattgattagacatattagtattaatttc 10914274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 17216957 - 17217001
Alignment:
Q  87 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17216957 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 17217001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17026391 - 17026261
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||  ||| |||||||| ||||||   |||||||   || |||||||||||||| ||||||  ||||||||  || ||||| |||||||    
T  17026391 gtagagtatcgtattcacatggattgtcctttcgtgggaacaattctagttacttatttttgtaagtttgacagtataaaagtgag-ttgcagtttttat 17026293  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||| || ||||| |||||||    
T  17026292 ctgtttgcaacagagtaaatttacctgttttt 17026261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21323934 - 21323873
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 62  Q
    ||||||||||||||| |||  |||||||||||||||||||||||| |||| |||||||||||    
T  21323934 gtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgttacttatttttg 21323873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17337194 - 17337134
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||||||| | || ||||||| ||||||||||||||||||||| ||||||||||    
T  17337194 gtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttattttt 17337134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11490572 - 11490631
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||| |||| |||||||||    
T  11490572 gtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttacttatttt 11490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 12578324 - 12578266
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    |||||||||||||| ||| |||||||||||| |||||||||||||||||  ||||||||    
T  12578324 tagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttcttatttt 12578266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20315040 - 20315098
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||| |||| |||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  20315040 gtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 10672506 - 10672442
Alignment:
Q  218 taatcaattcagtgatgtaaatagataaacttgattaattgattagacatattgttattaatttc 282  Q
    ||||||||| ||||| ||||| |||||||||||| | ||||||||||||||||  ||||||||||    
T  10672506 taatcaattgagtgacgtaaagagataaacttgacttattgattagacatattagtattaatttc 10672442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 10886146 - 10886082
Alignment:
Q  218 taatcaattcagtgatgtaaatagataaacttgattaattgattagacatattgttattaatttc 282  Q
    ||||||||| ||||| ||||| |||||||||||| | ||||||||||||||||  ||||||||||    
T  10886146 taatcaattgagtgacgtaaagagataaacttgacttattgattagacatattagtattaatttc 10886082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13128933 - 13128873
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||| ||||| | ||||||||||||||||||||||||| | |||| ||||||||||    
T  13128933 gtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttacttattttt 13128873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17216857 - 17216921
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa 65  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||  ||| |||||| |||||||    
T  17216857 gtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatatttgtaa 17216921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 17337096 - 17337052
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||    
T  17337096 ttgcaatttttatctgtttacaacagagcaagtttacctgttttt 17337052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 19562136 - 19562092
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  19562136 ttgcaatttttatctctttgcaacagagcaagtttacctgttttt 19562092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 22068831 - 22068763
Alignment:
Q  219 aatcaattcagtgatgtaaatagataaacttgattaattgattagacatattgttattaatttcaaaat 287  Q
    |||||||| ||||||||||| |||||||||||| | || |||||||||||||  ||||||||| |||||    
T  22068831 aatcaattgagtgatgtaaagagataaacttgacttatcgattagacatattaatattaatttaaaaat 22068763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25094608 - 25094716
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||| |||| ||| |||||||  ||||||||||||||||   || ||||| ||||||| ||   ||| |||||||| ||| |||||||||||||    
T  25094608 gtagagtatcatatccacatggattgttctttcgtccaaacaattcttgttacttaattttgtagtta--acggtataaaagttag-ttgcaatttttat 25094704  T
Q  101 ctgtttgcaaca 112  Q
    ||||||||||||    
T  25094705 ctgtttgcaaca 25094716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 9264966 - 9264923
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  9264966 ttgcaatttttatctgtttgcaacagagaaagtttacgtgtttt 9264923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 25121281 - 25121227
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||| ||| ||||||| ||||||||||||||||| |||| ||||||||    
T  25121281 agtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttacttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9737563 - 9737514
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgt 50  Q
    ||||||||||||||| ||| ||||||| |||||||| |||||||||||||    
T  9737563 gtagagtatcgtatccacatggattgtagtttcgtctaaacaatttgcgt 9737514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 17672141 - 17672174
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  17672141 ttgcaatttttatctgtttgcaacagagcaagtt 17672174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 17951256 - 17951223
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  17951256 ttgcaatttttatctgtttgcaacagagcaagtt 17951223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 17955108 - 17955075
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  17955108 ttgcaatttttatctgtttgcaacagagcaagtt 17955075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 22199552 - 22199645
Alignment:
Q  145 aagataaataaaaactataatgaactttcatgattgtcaaagattcttagctgcgatgtttgcaaaggttaaataatcaattcagtgatgtaaa 238  Q
    |||||||||||||  |||||||||||||||||||| ||||||||| |||  || ||||||| |  ||||||| | ||  |||| ||||||||||    
T  22199552 aagataaataaaacttataatgaactttcatgattatcaaagatttttatttgagatgtttcctgaggttaagttattgattccgtgatgtaaa 22199645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 10699664 - 10699736
Alignment:
Q  210 aggttaaataatcaattcagtgatgtaaatagataaacttgattaattgattagacatattgttattaatttc 282  Q
    ||||||| ||||||||| |||||  |||| |||||||||| | | ||||||||||||||||  ||||||||||    
T  10699664 aggttaagtaatcaattgagtgacataaagagataaacttaacttattgattagacatattagtattaatttc 10699736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 10913434 - 10913506
Alignment:
Q  210 aggttaaataatcaattcagtgatgtaaatagataaacttgattaattgattagacatattgttattaatttc 282  Q
    ||||||| ||||||||| |||||  |||| |||||||||| | | ||||||||||||||||  ||||||||||    
T  10913434 aggttaagtaatcaattgagtgacataaagagataaacttaacttattgattagacatattagtattaatttc 10913506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 25097875 - 25098003
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| |||||||  ||| |||| || ||||   || |||||||||| ||   ||||| |||| |||| || ||||||||||||||    
T  25097875 gtagagtatcgtatccacatggattgttcttttgtccgaaaaattcatgttacttatttttata--gttgacaatattaaagtta-gttgcaatttttat 25097971  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||| |||||| ||||| ||||| |||||||    
T  25097972 ctgttggcaacaaagcaaatttacctgttttt 25098003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 17709896 - 17709935
Alignment:
Q  92 aatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  17709896 aatttttatatgtttgcaacagagcaagtttacctgtttt 17709935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 121
Target Start/End: Complemental strand, 12578223 - 12578193
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||||||||||||||||||||||    
T  12578223 caatttttatctgtttgcaacagagcaagtt 12578193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 121
Target Start/End: Original strand, 14649036 - 14649066
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||||||||||||||||||||||    
T  14649036 caatttttatctgtttgcaacagagcaagtt 14649066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19374872 - 19374814
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||||||| || | ||||||||||| |||||||||||||   ||||||||||    
T  19374872 gtagagtatcgtatccactgagattgtcgttttgtccaaacaatttatataacttattt 19374814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24639513 - 24639467
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttg 47  Q
    ||||||||||||||| ||| ||||| |||||| ||||||||||||||    
T  24639513 gtagagtatcgtatccacatggattttcgttttgtccaaacaatttg 24639467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 25121191 - 25121153
Alignment:
Q  83 ataggttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  25121191 atagattgcaatttctatctgtttgcaacagagcaagtt 25121153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 5679344 - 5679377
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||||||||||| |||||||||||||    
T  5679344 ttgcaatttttatctgtttgtaacagagcaagtt 5679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 19929632 - 19929592
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  19929632 caatttttatctgtttgcaacagagcaa-attacatgttttt 19929592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 26115865 - 26115832
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||||||||||||||||||| |||||    
T  26115865 ttgcaatttttatctgtttgcaacagagtaagtt 26115832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 7582435 - 7582479
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||| |||||||||||| ||| ||||||||| |||||||    
T  7582435 ttgcaattttcatctgtttgcaatagaacaagtttacctgttttt 7582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 11933461 - 11933517
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    |||||||||  | ||| ||||||||||||||||||||||| | |||| |||||||||    
T  11933461 gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttacttatttt 11933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13992935 - 13992891
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||||||||| ||| ||||| |||||| ||||||||||||    
T  13992935 gtagagtatcgtatccacatggattttcgttttgtccaaacaatt 13992891  T

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Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19636645 - 19636601
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||| ||||| | ||||||||||||||| |||||||||||    
T  19636645 gtagagtattgtatctatagggattgtcgtttcatccaaacaatt 19636601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 22071097 - 22071053
Alignment:
Q  142 taaaagataaataaaaac-tataatgaactttcatgattgtcaaa 185  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||    
T  22071097 taaaagataaataaaaacctataataaactttcatgattatcaaa 22071053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 24639415 - 24639379
Alignment:
Q  95 ttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  24639415 ttttatttgtttgcaacagagcaagtttacctgtttt 24639379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11803120 - 11803250
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||| ||||||  |||||||| ||||||| ||||||||     
T  11803120 gtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttatttttgtaagtttgacagtataaaagttaggttgaaatttttag 11803219  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
     ||||||||||||||||||||||| ||||||    
T  11803220 ttgtttgcaacagagcaagtttacctgtttt 11803250  T

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Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 13418574 - 13418703
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| | |||||||||| ||||||||||||| ||  ||| |||||||||| ||| || |||| |||||||| |||||||||||||||||    
T  13418574 gtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttatttttttaagtt-gacggtataaaagttaggttgcaatttttat 13418672  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||| ||||||    
T  13418673 ctgtttgcaacagagcaagtttacctgtttt 13418703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16059080 - 16058950
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||  || |||||||||||||| ||||||| |||||||| |  ||| ||||||||||    
T  16059080 gtagagtatcgtatccacatggattgtcctttcgtccaaacaattttagttacttatttttgtaagtttgacggtataaaag-tgagtttcaatttttat 16058982  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||||| ||||| |||||||    
T  16058981 ctgtttgcaacagagcaaatttacttgttttt 16058950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 1848282 - 1848145
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaa-----------agataggttgcaa 93  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||           ||| || ||||||    
T  1848282 agtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttttgtaagtttgacgatataaaaattaagggttagagagcttgcaa 1848183  T
Q  94 tttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  1848182 tttttatctgtttgaaacagagcaagtttacctgtttt 1848145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17077168 - 17077297
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||| ||||| |  ||||||||||||||||||||||||||   || |||||||||||||| || |||| |||||||| | |||||||||||||||    
T  17077168 gtagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgttacttatttttgtaagtt-gacggtataaaagttgggttgcaatttttat 17077266  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||| |||| |||||||| ||||||    
T  17077267 ctgtttgcaatagagtaagtttacctgtttt 17077297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 13277544 - 13277650
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatc 101  Q
    |||||||||||||| ||| |||||||| |||||||| |||||||   || | |||||||||||| ||| ||| |||||||| ||||||||||||||||||    
T  13277544 tagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttgtaagtttaacggtataaaagttaggttgcaatttttatc 13277643  T
Q  102 tgtttgc 108  Q
    |||||||    
T  13277644 tgtttgc 13277650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13759919 - 13759838
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    |||||||||| |||| ||| |||||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||    
T  13759919 gtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttatttttgtaagtttgacgatataaaag 13759838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 4449024 - 4449134
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgt 104  Q
    ||||| ||||| ||||||| |||| ||| ||||||||||||   || |||||||||||||| ||||||| |||||||| ||||||| |||||||||||||    
T  4449024 agtattgtatccacagggactgtccttttgtccaaacaattcttgttacttatttttgtaagtttgacggtataaaag-taggttgaaatttttatctgt 4449122  T
Q  105 ttgcaacagagc 116  Q
    ||||| ||||||    
T  4449123 ttgcagcagagc 4449134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 6042500 - 6042624
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgat---ataaaagatag--gttgcaatt 95  Q
    ||||||||||||||| |||| | |||||||||||| |||||||||||||| ||||||||||   | ||||||| |   |||||||||||  |||||||||    
T  6042500 gtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgttacttattttt---agtttgacggtataataaaagatagatgttgcaatt 6042596  T
Q  96 tttatctgtttgcaacagagcaagtttac 124  Q
    ||||| |||||||||||||| ||||||||    
T  6042597 tttatatgtttgcaacagag-aagtttac 6042624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39273234 - 39273153
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    ||||||||||||||  | | |||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||||||    
T  39273234 gtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgtaagtttgacgatataaaag 39273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 3329717 - 3329574
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacg-at-ataaaagata----------ggt 88  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||| ||||| |||||||||||||| ||| ||| || || |||||||           ||    
T  3329717 gtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgttacttatttttgtaagtttaacgtataatgaaagataagggttagagagt 3329618  T
Q  89 tgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  3329617 tgcaatttttatctgtttgcaacatagcaagtttacttgttttt 3329574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2563857 - 2563921
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa 65  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||| |||||    
T  2563857 gtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttatttctgtaa 2563921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8054548 - 8054465
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||   || ||||||||||||||  ||||||||||||||||||    
T  8054548 gtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttatttttgtaa-gttgacgatataaaagata 8054465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8979065 - 8978981
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    |||||||||| |||| ||| ||||||| ||||||||||||||||| || | ||||||||| |||| |||||| ||||||||||||    
T  8979065 gtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattttggtaagtttgacaatataaaagata 8978981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9731686 - 9731626
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||| |||| ||||||||||    
T  9731686 gtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttacttattttt 9731626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11221223 - 11221163
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||| ||||| |||||||||||||||||||  ||||||||||||| ||||||||||    
T  11221223 gtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattttt 11221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17191260 - 17191131
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| | |||| ||||| |||| ||| ||| |||  ||| || ||||||| ||| ||||| | |||||||| ||| |||||||||||||    
T  17191260 gtagagtatcgtatccataggggttgtcctttcatccgaacgattctcgttacgtatttttttaagtttgatggtataaaag-tag-ttgcaatttttat 17191163  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||| ||||||||| | ||||| |||||||    
T  17191162 ctgtttccaacagagcgattttacctgttttt 17191131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9864385 - 9864327
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    |||||||||| |||| ||| |||||||||||||||| ||||||||||||| ||||||||    
T  9864385 gtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgttacttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18662481 - 18662539
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||  ||| ||||||||    
T  18662481 gtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17203063 - 17203124
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 62  Q
    ||||||||||||||  || |||||||||||||||||||||||||  |||| |||||||||||    
T  17203063 gtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttatttttg 17203124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5108605 - 5108649
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  5108605 gtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 5108649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7492322 - 7492262
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||||||| ||| ||||||| ||||||| |||||||||||| | ||||||||||    
T  7492322 gtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttattttt 7492262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 8877559 - 8877595
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttac 124  Q
    |||||||||||||||||||||||||||||||||||||    
T  8877559 ttgcaatttttatctgtttgcaacagagcaagtttac 8877595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16365745 - 16365805
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||||||| ||| |||||||||||| || ||||||||| |||| ||||||||||    
T  16365745 gtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttattttt 16365805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 20582394 - 20582437
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||    
T  20582394 ttgcaatttttatctatttgcaacagagcaagtttacctgtttt 20582437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31492970 - 31493029
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||  | |||||||||    
T  31492970 gtagagtatcgtatccacatggattgtcgttttgtccaaacaatttgttttacttatttt 31493029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10587083 - 10587041
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 43  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  10587083 gtagagtatcgtatctacagggattgtcgtttcgtctaaacaa 10587041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 13289413 - 13289336
Alignment:
Q  54 ttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||| ||||||| ||||||||| || ||||||||||| ||||||||||| || || | ||||| |||||||    
T  13289413 ttatttttgtaagtttgacggtataaaagaaag-ttgcaatttttttctgtttgcaatagtgcgaatttacctgttttt 13289336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 2563955 - 2563992
Alignment:
Q  87 gttgcaatttttatctgtttgcaacagagcaagtttac 124  Q
    |||| |||||||||||||||||||||||||||||||||    
T  2563955 gttgaaatttttatctgtttgcaacagagcaagtttac 2563992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 7318412 - 7318445
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  7318412 ttgcaatttttatctgtttgcaacagagcaagtt 7318445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 14195932 - 14195899
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  14195932 ttgcaatttttatctgtttgcaacagagcaagtt 14195899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 1584586 - 1584642
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    |||||||||||| ||||||||||| |||||||| |||||| | |||| |||||||||    
T  1584586 gagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgttacttatttt 1584642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18369039 - 18368995
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||| ||||| | |||||||||||||||||||||||||||    
T  18369039 gtagagtattgtatccatagggattgtcgtttcgtccaaacaatt 18368995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23100011 - 23099967
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||    
T  23100011 gtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 23099967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 5530068 - 5530119
Alignment:
Q  8 atcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    |||||||| |||| |||| ||||||||||||||||||||| || ||||||||    
T  5530068 atcgtatccacagagattttcgtttcgtccaaacaatttgtgttacttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 119
Target Start/End: Complemental strand, 10586984 - 10586953
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaag 119  Q
    ||||||||||||||||||||||||||||||||    
T  10586984 ttgcaatttttatctgtttgcaacagagcaag 10586953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 10648717 - 10648759
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  10648717 ttgcaatttttatctgtttgcaacaaagcaag-ttacatgtttt 10648759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8313454 - 8313412
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 43  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||    
T  8313454 gtagattatcgtatccacagggattgtcgtttcgtctaaacaa 8313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 140255 - 140288
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||| |||||||||||||||||||||||||||||    
T  140255 ttgccatttttatctgtttgcaacagagcaagtt 140288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 1587821 - 1587854
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||| ||||||||||||||||||||    
T  1587821 ttgcaatttttatttgtttgcaacagagcaagtt 1587854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 3734735 - 3734768
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||||| |||||||||||||||||||||||||||    
T  3734735 ttgcaaattttatctgtttgcaacagagcaagtt 3734768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 124
Target Start/End: Original strand, 5108706 - 5108739
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtttac 124  Q
    |||||||||||||||||||| |||||||||||||    
T  5108706 caatttttatctgtttgcaagagagcaagtttac 5108739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7318313 - 7318354
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 42  Q
    ||||||||||||||| ||| |||||||||||||||| |||||    
T  7318313 gtagagtatcgtatccacatggattgtcgtttcgtctaaaca 7318354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 7492223 - 7492190
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||| |||||||||||||||||||||    
T  7492223 ttgcaatttttaactgtttgcaacagagcaagtt 7492190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 8054116 - 8054037
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    |||||||||||||| ||| | |||||||||   |||||||||||  | | ||||||||||||||  ||||||||||||||||||    
T  8054116 tagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttatttttgtaa-gttgacgatataaaagata 8054037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 121
Target Start/End: Complemental strand, 8293997 - 8293968
Alignment:
Q  92 aatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||    
T  8293997 aatttttatctgtttgcaacagagcaagtt 8293968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 8313352 - 8313319
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||| ||||||||||||||    
T  8313352 ttgcaatttttatctgttttcaacagagcaagtt 8313319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 9500485 - 9500542
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    |||||||||||||| ||| ||||||| |||||||| |||||||| || | ||||||||    
T  9500485 tagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattacttattt 9500542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 18662579 - 18662612
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||| ||||||||||||||||||||    
T  18662579 ttgcaatttttatttgtttgcaacagagcaagtt 18662612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4785876 - 4785936
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||  ||| ||||||||||||||||||||||| || ||  ||| ||||||||||    
T  4785876 gtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt 4785936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4818876 - 4818936
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||  ||| ||||||||||||||||||||||| || ||  ||| ||||||||||    
T  4818876 gtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt 4818936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 6005878 - 6005934
Alignment:
Q  3 agagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||| ||||| ||| |||||||||||| ||||||||||||  ||| ||||||||    
T  6005878 agagtattgtatccacatggattgtcgtttggtccaaacaattcacgttacttattt 6005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 8978967 - 8978923
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||| |||||||||||| ||| ||||||||| |||||||    
T  8978967 ttgcaattttcatctgtttgcaatagaacaagtttacctgttttt 8978923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 18368938 - 18368906
Alignment:
Q  89 tgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||||||||||||||| ||||||||    
T  18368938 tgcaatttttatctgtttgcaacaaagcaagtt 18368906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 18449288 - 18449340
Alignment:
Q  7 tatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||| | |||||||||||||||  |||||||||| |||| ||||||||    
T  18449288 tatcgtatccatagggattgtcgtttcagccaaacaattggcgttacttattt 18449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 29242559 - 29242688
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| | || |||||||||||| ||||||||||| |||| || ||||||||||| || ||||||||||||| |||||||||||||||||    
T  29242559 gtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatatttttgtaagtt-gacgatataaaagttaggttgcaatttttat 29242657  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||| ||||||    
T  29242658 ctgtttgcaacagagcaagtttacctgtttt 29242688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 21449129 - 21449259
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| |||||||||||||| |||||||||||  || |||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  21449129 gtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgttacttatttttgtaagtttgacggtataaaagataggtt-caatttttat 21449227  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||| ||||||||||  |||||||    
T  21449228 ctgtttgcaacatagcaagtttaactgttttt 21449259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 18736299 - 18736177
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||| |  |||||| |||||||  |||||||||| ||||||    
T  18736299 gtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttatttttgt-aggttgacggtataaaatttaggttgcaaattttat 18736201  T
Q  101 ctgtttgcaacagagcaagtttac 124  Q
    |||||||||| |||||||||||||    
T  18736200 ctgtttgcaatagagcaagtttac 18736177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 18830527 - 18830651
Alignment:
Q  7 tatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgttt 106  Q
    ||||||||| |||||||||||| ||||||||||||||||    | |||||||||| ||||||||||| |||||||| || |||||||||| |||||||||    
T  18830527 tatcgtatccacagggattgtcctttcgtccaaacaattctttttacttatttttttaattttgacggtataaaagttaagttgcaatttctatctgttt 18830626  T
Q  107 gcaacagagcaagtttacatgtttt 131  Q
    ||||||||| || ||||| ||||||    
T  18830627 gcaacagagaaattttacctgtttt 18830651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 21988041 - 21987911
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||||||||  | | ||||||| |||||||||| ||||| |||| ||||||||||||||  | |||| |||||||| |||||||||||||||||    
T  21988041 gtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttatttttgtaagct-gacggtataaaagttaggttgcaatttttat 21987943  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
     ||||||||||||||||| ||||| |||||||    
T  21987942 atgtttgcaacagagcaactttacctgttttt 21987911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 24054019 - 24054148
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||| |||| |||||||||||| |||||||  ||||||||  || |||||||| ||||| ||||||| |||||||||||| || ||||||||||    
T  24054019 gtagagtatc-tatccacagggattgtcctttcgtctcaacaatttttgttacttatttatgtaagtttgacggtataaaagatagatttcaatttttat 24054117  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||| | ||||| ||||||    
T  24054118 ctgtttgcaacagagcgaatttacttgtttt 24054148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17610315 - 17610173
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaa-----------agataggtt 89  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||||           ||| || ||    
T  17610315 gtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgacgatataaaagttaaaggttagaaagctt 17610216  T
Q  90 gcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    | ||||||||| ||||||||||||||||||||||| |||||||    
T  17610215 gtaatttttatatgtttgcaacagagcaagtttacctgttttt 17610173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16916992 - 16916863
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||  ||| |||||||||| | |  |||||| |||||||| || ||||||||||||||    
T  16916992 gtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttatttttat-aggttgacggtataaaagtta-gttgcaatttttat 16916895  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    || ||||||||||||| | ||||| |||||||    
T  16916894 ctctttgcaacagagcgaatttacctgttttt 16916863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 727507 - 727637
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||| ||| ||| |||||    |||||||| |||||||   || |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  727507 gtagagtatcgcatccacaaggattactctttcgtccgaacaattcttgttacttatttttgttagtttgacgatataaaagataggttgcaatttttat 727606  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
     ||||||||||| || || ||||| ||||||    
T  727607 ttgtttgcaacatagaaaatttacctgtttt 727637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 16069594 - 16069479
Alignment:
Q  17 acagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaa-tttttatctgtttgcaacagag 115  Q
    |||||||||||||||||||   |||||||   || |||||||||||||| |||| || ||||||||  ||||||||| |||||||||| |||||||||||    
T  16069594 acagggattgtcgtttcgtttgaacaattcttgttacttatttttgtaagtttggcggtataaaagtaaggttgcaaatttttatctgcttgcaacagag 16069495  T
Q  116 caagtttacatgtttt 131  Q
    ||||||||| ||||||    
T  16069494 caagtttacctgtttt 16069479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 18825699 - 18825825
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgt 104  Q
    ||||||||||| ||| || ||||| ||| || | |||||||| ||| ||||| |||| ||| |||||||||| ||||| || ||||||||||||||||||    
T  18825699 agtatcgtatccacaagggttgtcctttagttcgaacaattttcgttacttaattttataagtttgacgatacaaaagttaagttgcaatttttatctgt 18825798  T
Q  105 ttgcaacagagcaagtttacatgtttt 131  Q
    || ||||| ||||| ||||| ||||||    
T  18825799 ttacaacaaagcaaatttacttgtttt 18825825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12208641 - 12208724
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    ||||| |||| |||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||||||    
T  12208641 gtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttatttttgtaa-gttgacgatataaaagata 12208724  T

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Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 23179839 - 23179941
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatc 101  Q
    ||||||||| |||| |||||||||||| |||||||| |||||||  ||| | |||||||||||| ||||||| |||||||| || |||||||||||||||    
T  23179839 tagagtatcatatccacagggattgtcctttcgtccgaacaattctcgttatttatttttgtaagtttgacggtataaaag-ta-gttgcaatttttatc 23179936  T
Q  102 tgttt 106  Q
    |||||    
T  23179937 tgttt 23179941  T

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Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 25405685 - 25405547
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaa------------agataggttgca 92  Q
    ||||||||||| ||| |||||||||||||||||||||| ||  ||| ||||||||||||||  |||||||||||||            ||| || |||||    
T  25405685 agtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttatttttgtaa-gttgacgatataaaagtttaagggttagaaagcttgca 25405587  T
Q  93 atttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  25405586 atttttatttgtttgcaacagagcaagtttacttgttttt 25405547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 9401545 - 9401687
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattt--tgacgatataaaagatag----------gt 88  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||| |||| |||||||||||||| ||  |||    ||||||||||           ||    
T  9401545 gtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttttgtaagttgttgatataataaaagataacggttagagagt 9401644  T
Q  89 tgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  9401645 tgcaatttttatctgtttgcaacagagtaagtttacctgtttt 9401687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15544025 - 15543942
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    ||||||||||||||| || |  ||||||||||||||||||||||| | || |||||||||| ||| |||||||||||||||||||    
T  15544025 gtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttatttttttaa-tttgacgatataaaagata 15543942  T

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Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21666667 - 21666584
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||  ||| |||||||||| |||  ||||||||||||||||||    
T  21666667 gtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataa-gttgacgatataaaagata 21666584  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 14779606 - 14779684
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaa 81  Q
    ||||||||| |||| ||||||||||||||||||||||||||  | |||| | ||||||||||||  ||||||||||||||    
T  14779606 tagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttatttttgtaa-gttgacgatataaaa 14779684  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 14781912 - 14781783
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| | |||||| |||||||| || ||||   |  |||||||||||||| |||||| | | ||||| ||| |||||||||||||    
T  14781912 gtagagtatcgtatccacaagaattgtcctttcgtccgaaaaattctagatacttatttttgtaagtttgacaagaaaaaag-tag-ttgcaatttttat 14781815  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
     |||||||| |||||||| ||||| |||||||    
T  14781814 atgtttgcatcagagcaaatttacctgttttt 14781783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 31236011 - 31235966
Alignment:
Q  87 gttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||    
T  31236011 gttgcaatttttatctctttgcaacagagcaagtttacttgttttt 31235966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 16179047 - 16179180
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagatagg-----------tt 89  Q
    ||||||||||||||| | | |||  ||||||||||||||||||||   || ||||||||||||||  |||||||||||||| ||| |           ||    
T  16179047 gtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttgtaa-gttgacgatataaaatataagggttagatgtctt 16179145  T
Q  90 gcaatttttatctgtttgcaacagagcaagtttac 124  Q
    |||||||||||||| ||||||||||||||||||||    
T  16179146 gcaatttttatctgattgcaacagagcaagtttac 16179180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 51473935 - 51473875
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||||||| | | |||||||||||| ||||||||||||||||| |||| |||||    
T  51473935 gtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgttttt 51473875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13345395 - 13345337
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    |||||||||| |||| ||| |||||||||||| |||||||||||| |||| ||||||||    
T  13345395 gtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 13345337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16787785 - 16787724
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 62  Q
    ||||||||||||||  |||  ||||||||||| | ||||||||||||||| |||||||||||    
T  16787785 gtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttacttatttttg 16787724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21847673 - 21847717
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||||    
T  21847673 gtagagtattgtatccacatggattgtcgtttcgtccaaacaatt 21847717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 18100973 - 18100931
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  18100973 ttgcaatttttatctgtttgcaacatagcaag-ttacatgtttt 18100931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 12208737 - 12208783
Alignment:
Q  85 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||| || |||| |||||||||||||||||||||||||| ||||||    
T  12208737 aggtttcagttttaatctgtttgcaacagagcaagtttacctgtttt 12208783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 118
Target Start/End: Complemental strand, 32382968 - 32382938
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaa 118  Q
    |||||||||||||||||||||||||||||||    
T  32382968 ttgcaatttttatctgtttgcaacagagcaa 32382938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 3591711 - 3591654
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    |||||||||||||| |||  ||||||||||| |||||||||||| || | ||||||||    
T  3591711 tagagtatcgtatccacatagattgtcgttttgtccaaacaattcgccttacttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 15543929 - 15543884
Alignment:
Q  87 gttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||| ||||||||||| || |||||||| |||||||    
T  15543929 gttgcaatttttatttgtttgcaacatagtaagtttacctgttttt 15543884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 15807980 - 15807947
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||| ||||||||||||||||||||    
T  15807980 ttgcaatttttatttgtttgcaacagagcaagtt 15807947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 18529149 - 18529109
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||  ||||||||||||||||||||| ||||||    
T  18529149 caatttttatcaatttgcaacagagcaagtttacctgtttt 18529109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 21334774 - 21334695
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    |||||||||||   ||| |||||| |||| |||||||||||  ||| |||||||||| |||  ||||||||||||||||||    
T  21334774 agtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttatttttttaa-gttgacgatataaaagata 21334695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 23038068 - 23038012
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    |||||||||||| ||| |||||||||||||||| |||||| |  ||| |||||||||    
T  23038068 gagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttacttatttt 23038012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 44795411 - 44795447
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaa 40  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  44795411 gagtatcgtatccacatggattgtcgtttcgtccaaa 44795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17101952 - 17101822
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| | ||||||||||||||| |||||||||| || || |||||| ||||||| || |||| ||||||||||||||| ||||||||||    
T  17101952 gtagagtatcgtatccatagggattgtcgtttcatccaaacaatatgtgttacttatatttgtaagtt-gacggtataaaagataggttccaatttttat 17101854  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||||||||||| |||||||    
T  17101853 ctgtttgcaacagagcaagtttacctgttttt 17101822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 24114341 - 24114201
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat-----------aggtt 89  Q
    |||||||||||||||  |||||||||||||||||||||||||| |||||| ||||||||||||||  |||||||||||||||||           |||||    
T  24114341 gtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgttacttatttttgtaa-gttgacgatataaaagataagggttataaaggtt 24114243  T
Q  90 gcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  24114242 gcaatttttatctgtttgcagcagagcaagtttacctgtttt 24114201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 27659485 - 27659617
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata--ggttgcaattttt 98  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |  | || ||||||||||||||  ||||||||||||||||||  ||||||||||||     
T  27659485 gtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttgtaa-gttgacgatataaaagataagggttgcaatttta 27659583  T
Q  99 atctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||| ||||||| ||||||||||||| |||||||    
T  27659584 atctatttgcaaaagagcaagtttacctgttttt 27659617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29382420 - 29382339
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  29382420 gtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttacttatttttgtaagtttgacgatataaaag 29382339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 23893260 - 23893131
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||| ||||||||  ||||||  ||| |||| |||||||   || |||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  23893260 gtagagtatcatatcaacatagattgttcttttgtccgaacaattcttgttacttatttttgtaagtttgacggtataaaagata-gttgcaatttttat 23893162  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||| ||||| ||||| ||||||    
T  23893161 ctgtttgcaacaaagcaaatttacctgtttt 23893131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16403952 - 16404067
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaattttta 99  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||   || |||||||||||||| |||| ||| |||||||| |  |||||||||||||    
T  16403952 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagttttcacggtataaaag-tgagttgcaattttta 16404050  T
Q  100 tctgtttgcaacagagc 116  Q
    | |||||||||||||||    
T  16404051 tttgtttgcaacagagc 16404067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24269637 - 24269717
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaa 81  Q
    ||||||||||||||| |||||||||||||||||||||||||||||  | | | |||||||||||| ||||||| |||||||    
T  24269637 gtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatttatttttgtaagtttgacggtataaaa 24269717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 19264133 - 19264204
Alignment:
Q  52 acttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagttta 123  Q
    |||||||||||||| ||||| | |||||||| || |||| ||||||||||| ||||||||||||||||||||    
T  19264133 acttatttttgtaagtttgatgttataaaagttaagttgtaatttttatctttttgcaacagagcaagttta 19264204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 18569107 - 18569236
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||| |||| | |||||||||| |||||||  || ||||   || |||||||||||||| |||||||| ||||||||  || |||| ||||||||    
T  18569107 tagagtatcatatccatagggattgtcctttcgtcttaaaaattcttgttacttatttttgtaagttttgacggtataaaagtgag-ttgctatttttat 18569205  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||| ||| ||||||| ||||||    
T  18569206 ctgtttgcaacatagcgagtttacttgtttt 18569236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 18448600 - 18448518
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    ||||| |||||||||| || ||||||||||| ||||||||||||  ||| |||||||||| |||  ||||||||||||||||||    
T  18448600 tagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttatttttataa-gttgacgatataaaagata 18448518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 25226179 - 25226257
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    |||||||||||  ||||||||| | ||||| |||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  25226179 gagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacatatttttataagtttgaagatataaaag 25226257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 6885000 - 6885056
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||||  |||||||||    
T  6885000 gagtatcgtatctacatggattgtcgtttcgtccaaacaacttgcgctacttatttt 6885056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13697895 - 13697954
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||  ||||| |||||||||    
T  13697895 gtagagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttatttt 13697954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 19786874 - 19786913
Alignment:
Q  92 aatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  19786874 aatttttatctgtttgcaacagagcaag-ttacatgttttt 19786913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2637638 - 2637697
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||||||| ||| |||||||||||||||| |||||| |  ||| |||||||||    
T  2637638 gtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 13315047 - 13314992
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||| ||| ||||| | ||||||||||||||||| |||| |||||||||    
T  13315047 agtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttatttt 13314992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14528189 - 14528248
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||||||| |||  |||||||||||||||||||||| |  ||| |||||||||    
T  14528189 gtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgttacttatttt 14528248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 30806531 - 30806492
Alignment:
Q  21 ggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  30806531 ggattgtcgtttcatccaaacaatttgcgttacttatttt 30806492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14075634 - 14075692
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||| ||||||||| ||| |||||||||||||  ||||||||| ||||| ||||||||    
T  14075634 gtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgttacttattt 14075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 13697994 - 13698027
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||| ||||||||||||||||||    
T  13697994 ttgcaatttttatctctttgcaacagagcaagtt 13698027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15238839 - 15238896
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatt 58  Q
    ||||| ||||||||| ||| | |||||||||||||| |||||||| |||| |||||||    
T  15238839 gtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 25182388 - 25182355
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||| ||||||||||||||||||    
T  25182388 ttgcaatttttatctatttgcaacagagcaagtt 25182355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 25226277 - 25226314
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtttacatgt 128  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  25226277 caatttttatatgtttgcaatagagcaagtttacatgt 25226314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 17509383 - 17509427
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||| | |||||||||| ||||||||||||| |||||||    
T  17509383 ttgcaattttcacctgtttgcaatagagcaagtttacctgttttt 17509427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24904673 - 24904717
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    |||||||||| |||| |||| ||||||||||||||| ||||||||    
T  24904673 gtagagtatcatatccacagtgattgtcgtttcgtctaaacaatt 24904717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 29382322 - 29382290
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagt 120  Q
    ||||||||||||||||||||||||| |||||||    
T  29382322 ttgcaatttttatctgtttgcaacatagcaagt 29382290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 44010984 - 44010941
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||    
T  44010984 ttgcaatttttatatgtttgcaacagaacaag-ttacatgttttt 44010941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21316 - 21446
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||| |||| |||||||||||| |||||||| |||||||   || || ||||||||||| ||||||| |||||||| || ||||||||||||||    
T  21316 gtagagtatcatatccacagggattgtcctttcgtccgaacaattcttgttacatatttttgtaagtttgacggtataaaagttaagttgcaatttttat 21415  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
     |||||||||||||| |||||||| ||||||    
T  21416 ttgtttgcaacagaggaagtttacctgtttt 21446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 25029 - 25156
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctg 103  Q
    |||||||||||  ||||| ||||||  |||||||||||||||   || |||||||||||||| ||||||| |||||||| || |||||||||||| |||     
T  25029 gagtatcgtatacacaggaattgtctgttcgtccaaacaattattgttacttatttttgtaagtttgacggtataaaagttaagttgcaatttttctcta 25128  T
Q  104 tttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||||||||||| ||||||    
T  25129 tttgcaacagagcaagtttacctgtttt 25156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 25781852 - 25781952
Alignment:
Q  23 attgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagttt 122  Q
    |||||||||||||||||||||||  ||| |||||||||||||| || || | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  25781852 attgtcgtttcgtccaaacaattcacgttacttatttttgtaagtt-gatggtataaaagttaggttgcaatttttatctgtttgcaacagagcaagttt 25781950  T
Q  123 ac 124  Q
    ||    
T  25781951 ac 25781952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11135947 - 11136062
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| |||| ||||||| |||||||  || ||||   || | |||||||||||| ||||||| |||||||| |||||||||||||||||    
T  11135947 gtagagtatcgtatccacagagattgtcctttcgtctgaataattattgttaattatttttgtaagtttgacggtataaaagttaggttgcaatttttat 11136046  T
Q  101 ctgtttgcaacagagc 116  Q
    ||||||||||||||||    
T  11136047 ctgtttgcaacagagc 11136062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 21841727 - 21841617
Alignment:
Q  21 ggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagt 120  Q
    |||||||| |||||||| |||| ||   || |||||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||| |||||||    
T  21841727 ggattgtcctttcgtccgaacatttcttgttacttatttttgtaagtttgacggtataaaagttaggttgcaatttttatctgattgcaacaaagcaagt 21841628  T
Q  121 ttacatgtttt 131  Q
    |||| ||||||    
T  21841627 ttacttgtttt 21841617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 23009453 - 23009325
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||| |||||||| |||||||||||| |||| |||||| ||||   || |||||||||||||| |||||||||||||||| || |||||| |||||||    
T  23009453 gtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataaaag-taagttgcagtttttat 23009356  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
     ||||||||||||||||| ||||| ||||||    
T  23009355 ttgtttgcaacagagcaaatttacctgtttt 23009325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 23778911 - 23779039
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||| |||||||| |||||||||||| |||| |||||| ||||   || |||||||||||||| |||||||||||||||| || |||||| |||||||    
T  23778911 gtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataaaag-taagttgcagtttttat 23779008  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
     ||||||||||||||||| ||||| ||||||    
T  23779009 ttgtttgcaacagagcaaatttacctgtttt 23779039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 22413108 - 22412979
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| |||||||  |||||||| |||||||   || |||||||||||||| ||||||| |||||||| || ||||||| ||||||    
T  22413108 gtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtataaaag-tatgttgcaacttttat 22413010  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||| |||||||| | ||||| ||||||    
T  22413009 ctgtttgtaacagagcgaatttacctgtttt 22412979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 9516825 - 9516908
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| | |||| ||||||||||||||  ||||||||||||||||||    
T  9516825 gtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaa-gttgacgatataaaagata 9516908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 24657511 - 24657386
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctg 103  Q
    |||||||||||| |||||||||||  |||||||| |||||||   || |||||||||||||| ||||||| ||||||   || |||| ||||||||||||    
T  24657511 gagtatcgtatccacagggattgttttttcgtccgaacaattcttgttacttatttttgtaagtttgacggtataaa--gtaagttgaaatttttatctg 24657414  T
Q  104 tttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||| | ||||| ||||||    
T  24657413 tttgcaacagagcgaatttacctgtttt 24657386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23844524 - 23844441
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    |||||||||| |||| | ||||||||||||||||||||||||| | |||| ||||||||||||||  ||||||||||||||||||    
T  23844524 gtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaa-gttgacgatataaaagata 23844441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9726062 - 9726120
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  9726062 gtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 22813763 - 22813638
Alignment:
Q  6 gtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtt 105  Q
    |||| ||||| | |||||||||| |||| ||| |||||||   || ||||||||||||   ||||||  |||||||| |||| |||||||||||| ||||    
T  22813763 gtattgtatctatagggattgtcctttcatccgaacaattcttgttacttatttttgtcggtttgacagtataaaagttaggatgcaatttttatttgtt 22813664  T
Q  106 tgcaacagagcaagtttacatgtttt 131  Q
    ||||||| ||||||||||| ||||||    
T  22813663 tgcaacaaagcaagtttacctgtttt 22813638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 23232020 - 23231961
Alignment:
Q  23 attgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  23232020 attgtcggttcgtccaaacaattcgcgttacttatttttgtaagtttgacgatataaaag 23231961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27737748 - 27737605
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa---aagatagg---------- 87  Q
    |||||||||| || | ||| ||||||| ||||||||||||||||| |||| |||||||||||||| || ||||||| ||   |||||| |              
T  27737748 gtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttacttatttttgtaagtt-gacgataaaatgaaagataagggttagagag 27737650  T
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  27737649 ttgcaatttttatctgtttgcaacagagcaagtttacctgttttt 27737605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5624680 - 5624762
Alignment:
Q  1 gtagagtatcgtat-caacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    |||||||||| ||| ||| || ||||||||||| || |||||||||||||| |||||||||||||| |||||||||| |||||    
T  5624680 gtagagtatcttatacaatagagattgtcgttttgtgcaaacaatttgcgttacttatttttgtaagtttgacgatagaaaag 5624762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 17827150 - 17827070
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 85  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||| |||| ||||||||||    ||||||| ||||||||||||    
T  17827150 tagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattttt---tttttgacaatataaaagata 17827070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23645826 - 23645765
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 62  Q
    ||||||||||||||| | |||||||||||||||||||||||||||  ||| | |||||||||    
T  23645826 gtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttg 23645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 17382214 - 17382250
Alignment:
Q  95 ttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||||||||||||||||    
T  17382214 ttttatctgtttgcaacagagcaagtttacatgtttt 17382250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22410386 - 22410326
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||  ||| ||||||||||    
T  22410386 gtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttattttt 22410326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23143762 - 23143806
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  23143762 gtagagtatcatatccacagggattgtcgtttcgtccaaacaatt 23143806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15466409 - 15466468
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||| |||| | |||||||    
T  15466409 gtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgttagttatttt 15466468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28933719 - 28933660
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||  ||||||||    
T  28933719 gtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgcttatttt 28933660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17299890 - 17299832
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||||||  |  ||||||||||||| ||||||||||||||||| ||||||||    
T  17299890 gtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 22410289 - 22410255
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagttt 122  Q
    |||||||||||||||||||||||||||||||||||    
T  22410289 ttgcaatttttatctgtttgcaacagagcaagttt 22410255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 28933620 - 28933587
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  28933620 ttgcaatttttatctgtttgcaacagagcaagtt 28933587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 14636923 - 14636987
Alignment:
Q  17 acagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaa 81  Q
    ||||| ||||||||| |||| |||||||| | || |||||||||| ||| |||||||||||||||    
T  14636923 acaggaattgtcgttccgtctaaacaattcgtgttacttatttttataagtttgacgatataaaa 14636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17883844 - 17883780
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa 65  Q
    |||||| |||| ||| |||||||||||| |||||||||||||||| | || ||||| ||||||||    
T  17883844 gtagaggatcgcatcgacagggattgtcctttcgtccaaacaattcgtgttacttacttttgtaa 17883780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 20005879 - 20005835
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||    
T  20005879 ttgcaatttttatttgtttgcaacagagcgagtttacctgttttt 20005835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 23844426 - 23844382
Alignment:
Q  87 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||    
T  23844426 gttgcaatttttatctgtttgcaatagaccaagtttacctgtttt 23844382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 24252287 - 24252227
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 62  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||   || |||||||||||    
T  24252287 tagagtatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttatttttg 24252227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 23645727 - 23645685
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||| |||||||||||||||||| |||||||||||    
T  23645727 ttgcaatttttatttgtttgcaacagagcaag-ttacatgtttt 23645685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 24252186 - 24252156
Alignment:
Q  92 aatttttatctgtttgcaacagagcaagttt 122  Q
    |||||||||||||||||||||||||||||||    
T  24252186 aatttttatctgtttgcaacagagcaagttt 24252156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 24475191 - 24475237
Alignment:
Q  85 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||| ||||||||||||||||| | ||||||||| ||||||    
T  24475191 aggttgcaatctttatctgtttgcaacaaaacaagtttacctgtttt 24475237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 8241414 - 8241447
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||| ||||||||    
T  8241414 ttgcaatttttatctgtttgcaacatagcaagtt 8241447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 15466509 - 15466542
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||||| |||||||||||||||||||||||||||    
T  15466509 ttgcaaattttatctgtttgcaacagagcaagtt 15466542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17729192 - 17729241
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgt 50  Q
    ||||||||||||||| |||  |||||||||||||||||||| ||| ||||    
T  17729192 gtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgt 17729241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 20145083 - 20145038
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttta 133  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||||    
T  20145083 ttgcaatttttatatgtttgcaacagagaaagtttacgtattttta 20145038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 121
Target Start/End: Original strand, 21907577 - 21907606
Alignment:
Q  92 aatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||    
T  21907577 aatttttatctgtttgcaacagagcaagtt 21907606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 22187756 - 22187801
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttta 133  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||||    
T  22187756 ttgcaatttttatatgtttgcaacagagaaagtttacgtattttta 22187801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 25927265 - 25927232
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||| ||||||||||    
T  25927265 ttgcaatttttatctgtttgcaatagagcaagtt 25927232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 124
Target Start/End: Complemental strand, 27124452 - 27124419
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtttac 124  Q
    |||||||||| |||||||||||||||||||||||    
T  27124452 caatttttatatgtttgcaacagagcaagtttac 27124419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21672494 - 21672450
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||||||||| ||| ||||| || ||||||||||||||||    
T  21672494 gtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21672450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21679910 - 21679866
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||||||||| ||| ||||| || ||||||||||||||||    
T  21679910 gtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21679866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3571 - 3686
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||   || |||||||||||||| ||||||| | |||||| |||||||||||||| ||    
T  3571 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtgtaaaagttaggttgcaattttcat 3670  T
Q  101 ctgtttgcaacagagc 116  Q
    ||||||||||||||||    
T  3671 ctgtttgcaacagagc 3686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23388897 - 23388782
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||   || |||||||||||||| ||||||| | |||||| |||||||||||||| ||    
T  23388897 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtgtaaaagttaggttgcaattttcat 23388798  T
Q  101 ctgtttgcaacagagc 116  Q
    ||||||||||||||||    
T  23388797 ctgtttgcaacagagc 23388782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 15375941 - 15375823
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||| | ||||||||||| ||  |||||| |||||||  ||| |||||||||||||    
T  15375941 gtagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgcattacttatttttgcaa-gttgacggtataaaa-ttagattgcaatttttat 15375844  T
Q  101 ctgtttgcaacagagcaagtt 121  Q
     ||||||||||||||||||||    
T  15375843 ttgtttgcaacagagcaagtt 15375823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 20564139 - 20564009
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| ||| |||||||  ||||||||||||  ||   || |||||||||||||| ||||||| ||||||||  || |||||||||||||    
T  20564139 gtagagtatcgtatccacatggattgttctttcgtccaaacgcttctagttacttatttttgtaagtttgacggtataaaagtgag-ttgcaatttttat 20564041  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||||| ||||| |||||||    
T  20564040 ctgtttgcaacagagcaaatttacttgttttt 20564009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 19004282 - 19004153
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata----------ggttgcaa 93  Q
    |||||||||||| ||| |||||||| ||| ||||||||||||  ||| |||||||||||||| |||||||||||||||||||           |||||||    
T  19004282 gagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttatttttgtaagtttgacgatataaaagataagggttaaatagttgcaa 19004183  T
Q  94 tttttatctgtttgcaacagagcaagttta 123  Q
    |||||||||||||||||||| |||||||||    
T  19004182 tttttatctgtttgcaacagggcaagttta 19004153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20315489 - 20315347
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagatagg------------t 88  Q
    ||||||||||||||| ||| ||||| || |||||||||||||||| ||||||||||||||| | |  ||||||||||||||  || |            |    
T  20315489 gtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttatttttattaagttgacgatataaaatttaagggataaagaaact 20315390  T
Q  89 tgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  20315389 tgcaatttttatctgtttgcaacaaagcaagtttacatgtttt 20315347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16523849 - 16523720
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||| ||||| |||||| ||||| |||||||| |||||||   || ||||| |||||||| ||||||  | |||||| ||| |||||||||||||    
T  16523849 gtagagtattgtatccacagggtttgtcctttcgtccgaacaattattgttacttagttttgtaagtttgacagtttaaaag-tag-ttgcaatttttat 16523752  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||| | ||||| |||||||    
T  16523751 ctgtttgcaacagagcgaatttacctgttttt 16523720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 28664814 - 28664943
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||  | ||||| |||| |||||| | |||||||  ||| ||||||||||| || ||||||| |||||||  || || |||||||||||    
T  28664814 gtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttatttttgcaagtttgacggtataaaat-taagtcgcaatttttat 28664912  T
Q  101 ctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||| | ||||| ||||||    
T  28664913 ctgtttgcaacagagcgaatttacctgtttt 28664943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24245603 - 24245539
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa 65  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| | |||| ||||||||||||||    
T  24245603 gtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaa 24245539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 20858725 - 20858835
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| || | ||||||| ||| |||| |||||||   || |||||||||||||| ||||||| |||||||| || ||| ||||||||||    
T  20858725 gtagagtatcgtatccacggagattgtccttttgtccgaacaattcttgttacttatttttgtaagtttgacggtataaaag-taagttacaatttttat 20858823  T
Q  101 ctgtttgcaaca 112  Q
    | ||||||||||    
T  20858824 cggtttgcaaca 20858835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 20744699 - 20744587
Alignment:
Q  29 gtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagatagg----------ttgcaatttttatctgtttgcaacagagcaa 118  Q
    |||||||||||||| ||  ||| |||||||||||||| |||||||||||||||| || |          ||||||||||||||||||||||||| |||||    
T  20744699 gtttcgtccaaacatttcacgttacttatttttgtaagtttgacgatataaaagttaagggttagagagttgcaatttttatctgtttgcaacatagcaa 20744600  T
Q  119 gtttacatgtttt 131  Q
    |||||| ||||||    
T  20744599 gtttacctgtttt 20744587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17431923 - 17432064
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagata----------ggtt 89  Q
    ||||||||||||||| |||| |||||||||||| ||||||||| |  ||  |||||||||| ||| ||||| |||||||||| |||           |||    
T  17431923 gtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttatttttataagttttggcgatataaaatataagggttaaagagtt 17432022  T
Q  90 gcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    | ||||||| ||||||||||||||||||||||||| ||||||    
T  17432023 gtaatttttttctgtttgcaacagagcaagtttacttgtttt 17432064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36175173 - 36175234
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 62  Q
    ||||||||||||||| | | |||||||||||||||||||||||  ||||| |||||||||||    
T  36175173 gtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttacttatttttg 36175234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 17315155 - 17315045
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgt 104  Q
    ||||||||||| ||| |||||||| |||| ||| |||||||   || |||||||||||||| ||||  | ||||||||| | ||| |||||||||||| |    
T  17315155 agtatcgtatccacatggattgtcctttcttccgaacaattctagttacttatttttgtaagtttgttggtataaaaga-aagttacaatttttatcttt 17315057  T
Q  105 ttgcaacagagc 116  Q
    |||||| |||||    
T  17315056 ttgcaatagagc 17315045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20549763 - 20549700
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgta 64  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||   || |||||||||||||    
T  20549763 gtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttgta 20549700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 39434509 - 39434583
Alignment:
Q  8 atcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    |||||||| ||| |||||||| ||| |||||||||||| |||| |||||||||| | |  |||||||||||||||    
T  39434509 atcgtatccacatggattgtccttttgtccaaacaattcgcgttacttatttttattaacttgacgatataaaag 39434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 18937889 - 18937929
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  18937889 caatttttatctgtttgcaacagagcaag-ttacatgttttt 18937929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 24260655 - 24260688
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  24260655 ttgcaatttttatctgtttgcaacagagcaagtt 24260688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17185503 - 17185547
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||    
T  17185503 gtagagtatcgtatctacagggattgtcgtttcaaccaaacaatt 17185547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18208308 - 18208264
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||    
T  18208308 gtagagtatcgtatccacatggattgtcctttcgtccaaacaatt 18208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24140482 - 24140542
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||| ||||| || ||||||||| |||||||||||||||| |||| || |||||||    
T  24140482 gtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattttt 24140542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25550563 - 25550519
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||    
T  25550563 gtagagtatcatatccacagggattgtcatttcgtccaaacaatt 25550519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19283914 - 19283855
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||| ||||| ||| | |||  ||||||||||||||||||||| |||||||||||    
T  19283914 gtagagtattgtatccacaagaattaacgtttcgtccaaacaatttgcttaacttatttt 19283855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25402396 - 25402337
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||| ||||| ||||||||||||||||||||| ||  ||| |||| |||||||||    
T  25402396 gtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttacttatttt 25402337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34487677 - 34487736
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||| |||| |||| ||| |||||||||||||||| |||||||| |||| |||||||||    
T  34487677 gtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttatttt 34487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 121
Target Start/End: Original strand, 22755664 - 22755694
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||||||||||||||||||||||    
T  22755664 caatttttatctgtttgcaacagagcaagtt 22755694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 34487777 - 34487818
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttt 130  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  34487777 ttgcaatttttatctgttttcaacagagcaa-tttacatgttt 34487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 24260560 - 24260617
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 62  Q
    ||||||||||| ||| |||||||| ||||||||||| |||  |||| |||||||||||    
T  24260560 agtatcgtatccacaaggattgtcatttcgtccaaaaaatccgcgttacttatttttg 24260617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 26120924 - 26120965
Alignment:
Q  21 ggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 62  Q
    ||||||||||||||||||||||||| || | |||||||||||    
T  26120924 ggattgtcgtttcgtccaaacaattagcattacttatttttg 26120965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15690817 - 15690877
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||||||||||||| ||  | ||||||||||||||||| |||||  ||| ||||||||||    
T  15690817 gtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttacttattttt 15690877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 18208212 - 18208176
Alignment:
Q  85 aggttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||||||||||||||||  ||||||||||    
T  18208212 aggttgcaatttttatctgtttgcagtagagcaagtt 18208176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22755561 - 22755605
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    ||||||||||||||| | | ||||||||||||| |||||||||||    
T  22755561 gtagagtatcgtatccataaggattgtcgtttcttccaaacaatt 22755605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16230001 - 16229871
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| |||||||||||| ||| ||||  ||||||   || |||||||||||||| ||||| | |||||||| || ||||||||||||||    
T  16230001 gtagagtatcgtatccacagggattgtccttttgtccttacaattctagttacttatttttgtaagtttgatggtataaaag-taagttgcaatttttat 16229903  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||||||||| | ||||| |||||||    
T  16229902 ctgtttgcaacagagcgaatttacctgttttt 16229871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 8765161 - 8765287
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgt 104  Q
    ||||||||||| ||| |||||||| ||| |||  |||||||   || ||||| |||||||| ||||||  |||||||| ||||||||||||||||| |||    
T  8765161 agtatcgtatccacatggattgtccttttgtctgaacaattcttgttacttagttttgtaagtttgacagtataaaagttaggttgcaatttttatatgt 8765260  T
Q  105 ttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||| ||||||    
T  8765261 ttgcaacagagcaagtttacctgtttt 8765287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 8770063 - 8770189
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgt 104  Q
    |||||| |||| ||| |||||||| ||| |||  |||||||   || ||||| |||||||| ||||||  |||||||| ||||||||||||||||| |||    
T  8770063 agtatcatatccacatggattgtccttttgtctgaacaattcttgttacttagttttgtaagtttgacagtataaaagttaggttgcaatttttatatgt 8770162  T
Q  105 ttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||| ||||||    
T  8770163 ttgcaacagagcaagtttacctgtttt 8770189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17438490 - 17438348
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa------------aagataggt 88  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||||             ||| || |    
T  17438490 gtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgacgatataataaataaaggtttagaaagct 17438391  T
Q  89 tgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||||||||| ||||| ||||||    
T  17438390 tgcaatttttatctgtttgcaacagagcaattttacctgtttt 17438348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 22349449 - 22349556
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| |||   |||||||||||||||||||||||  | | ||||||||||||||  |||||  |||||||| |||||||||||||||||    
T  22349449 gtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttatttttgtaa-gttgacagtataaaagttaggttgcaatttttat 22349547  T
Q  101 ctgtttgca 109  Q
    |||||||||    
T  22349548 ctgtttgca 22349556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 12754970 - 12754848
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatc 101  Q
    |||||||||||||| |||  ||||||| ||||||   |||||||  | | |||||||||||||| ||||||  |||||||| || ||| ||||||||||     
T  12754970 tagagtatcgtatccacaatgattgtcctttcgtatgaacaattctctttacttatttttgtaactttgacagtataaaagttaagtttcaatttttatt 12754871  T
Q  102 tgtttgcaacagagcaagtttac 124  Q
    ||||||||||||||| |||||||    
T  12754870 tgtttgcaacagagctagtttac 12754848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12411191 - 12411272
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||  || |||||||||| ||| ||||| ||||||||||    
T  12411191 gtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggttacttatttttctaagtttgatgatataaaag 12411272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 20023595 - 20023485
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaatttttatctg 103  Q
    ||||| |||||||||||||||||| |||||||| |||||||    | |||||||||||||| |||||||| || |||||  ||  |||||||||||||||    
T  20023595 agtattgtatcaacagggattgtcctttcgtccgaacaattcttcttacttatttttgtaagttttgacggtacaaaagtgag--tgcaatttttatctg 20023498  T
Q  104 tttgcaacagagc 116  Q
    |||||||||||||    
T  20023497 tttgcaacagagc 20023485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 19171873 - 19171803
Alignment:
Q  21 ggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgca 92  Q
    |||||||||||||||||||||||||||| | |||||||||||| |  ||||||||||||||| |||||||||    
T  19171873 ggattgtcgtttcgtccaaacaatttgcattacttatttttgt-aggttgacgatataaaagttaggttgca 19171803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 21301958 - 21302093
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgat---ataaaagata----------gg 87  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||| | || ||||||||||||||  ||||||||   ||||||||||           |    
T  21301958 gtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagttacttatttttgtaa-attgacgatataataaaagatatgggttagagtg 21302056  T
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttac 124  Q
    ||| |||||||||||||||||||||||||||||||||    
T  21302057 ttggaatttttatctgtttgcaacagagcaagtttac 21302093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8889211 - 8889130
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    ||||||||| ||||| |||||||||||| |||||| | |||||||  ||| |||||||||||||| ||||||| ||||||||    
T  8889211 gtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttatttttgtaagtttgacggtataaaag 8889130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 19576265 - 19576158
Alignment:
Q  3 agagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatct 102  Q
    ||||||||||||| | | |||||||| |||||||| |||||||   || ||||| |||||||| ||| ||| |||||||| || ||||||||||||||||    
T  19576265 agagtatcgtatccagatggattgtcctttcgtccgaacaattctagttacttacttttgtaagtttaacggtataaaag-ta-gttgcaatttttatct 19576168  T
Q  103 gtttgcaaca 112  Q
    ||||||||||    
T  19576167 gtttgcaaca 19576158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12805949 - 12805890
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    |||||||||| |||| ||| ||||||||||||| |||||||||||||||| |||||||||    
T  12805949 gtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgttacttatttt 12805890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19910019 - 19909915
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    ||||||||||||||| |||||||||||| |||| | | |||||||   || |||||||||||||| ||||||  |||||||| || ||||||||||||||    
T  19910019 gtagagtatcgtatccacagggattgtcctttctttcgaacaattctagttacttatttttgtaagtttgaccgtataaaag-ta-gttgcaatttttat 19909922  T
Q  101 ctgtttg 107  Q
    || ||||    
T  19909921 ctctttg 19909915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 19167452 - 19167557
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatc 101  Q
    |||||||||||||| ||| ||||| || |||||||| |||||||   || ||||||||||||||  |||||  ||||||  || ||||||||||||||||    
T  19167452 tagagtatcgtatccacatggattatcctttcgtccgaacaattctagttacttatttttgtaa-gttgacagtataaa--attggttgcaatttttatc 19167548  T
Q  102 tgtttgcaa 110  Q
    |||||||||    
T  19167549 tgtttgcaa 19167557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 932783 - 932863
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 82  Q
    |||||||||||||| |||| ||||||| ||||||||||| ||||  | | |||||||||| ||| ||||||| ||||||||    
T  932783 tagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttatttttataagtttgacgttataaaag 932863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 3116475 - 3116419
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    |||||| ||||| |||||||||||||||||||||||||||||  ||| |||||||||    
T  3116475 gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttacttatttt 3116419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19925682 - 19925602
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaa 81  Q
    ||||||||||||||| ||| |||||||| ||||||||||| |||| |||| |||||||||| | |  || |||||||||||    
T  19925682 gtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttatttttattaagttaacgatataaaa 19925602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 4650364 - 4650407
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  4650364 ttgcaatttttatctgtttgcaacggagcaagtttacctgtttt 4650407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8557188 - 8557130
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||||||| ||| ||||||||||||| |  ||||||||||||| ||||||||    
T  8557188 gtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 4650275 - 4650328
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatt 58  Q
    ||||||||||| |||||||||||| ||||| |||||||||| |||| |||||||    
T  4650275 agtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt 4650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 17155931 - 17155964
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  17155931 ttgcaatttttatctgtttgcaacagagcaagtt 17155964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 21303314 - 21303281
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  21303314 ttgcaatttttatctgtttgcaacagagcaagtt 21303281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 31286073 - 31286017
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||    
T  31286073 tagaatatcgtatccacagggattgt-gtttcgtccaaacaatttccgttacttattt 31286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 932884 - 932924
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  932884 caatttttatttgtttgcaacagagcaagtttacttgtttt 932924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27413941 - 27413814
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||| |||| | |||||||||| ||||| |  |||||||   || ||||||||||||| ||| |||| |||||||| |  ||| ||||||||||    
T  27413941 gtagagtatcatatccaaagggattgtcctttcgactgaacaattcttgttacttatttttgtagttt-gacg-tataaaagtt--gttacaatttttat 27413846  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||| ||||||||| | ||||| |||||||    
T  27413845 ctgttttcaacagagcgattttacctgttttt 27413814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41508407 - 41508467
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    ||||| |||||||||  | ||||||||||||| ||||||||||||||| | ||||||||||    
T  41508407 gtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcattacttattttt 41508467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 119
Target Start/End: Complemental strand, 3116380 - 3116349
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaag 119  Q
    ||||||||||||||||||||||||||||||||    
T  3116380 ttgcaatttttatctgtttgcaacagagcaag 3116349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 8883094 - 8883039
Alignment:
Q  78 aaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgttttta 133  Q
    ||||| || |||||||||||||||||||||||||| ||| ||||||| | ||||||    
T  8883094 aaaagctaagttgcaatttttatctgtttgcaacatagcgagtttacctattttta 8883039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20429750 - 20429826
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa 79  Q
    ||||||||||||||| | | |||||||| |||| |||| |||||| |||| |||||||||  ||| |||||||||||||    
T  20429750 gtagagtatcgtatctataaggattgtcatttcatccacacaattcgcgttacttatttt--taagtttgacgatataa 20429826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 123
Target Start/End: Original strand, 20429849 - 20429884
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagttta 123  Q
    ||||||||||||| ||||||||||||||||||||||    
T  20429849 ttgcaatttttatatgtttgcaacagagcaagttta 20429884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 21325384 - 21325439
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    ||||||||||| |||   ||||||||||||||||||||||||| || |||||||||    
T  21325384 agtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttacttatttt 21325439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 19908351 - 19908429
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactta-tttttgtaattttgacgatataaaag 82  Q
    ||||||||||| ||| || | ||||||||||||||||||||  |||||| || ||||| | | ||||||||||||||||    
T  19908351 agtatcgtatccacaagggtcgtcgtttcgtccaaacaattcacgtaacctattttttttcagtttgacgatataaaag 19908429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21825928 - 21825870
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||||||| ||| ||||| | |||||||||||||| || |||| ||||||||    
T  21825928 gtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttacttattt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 7495151 - 7495094
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 61  Q
    |||||||| ||| ||| |||| ||||||||||||||||||||  ||| ||||||||||    
T  7495151 gagtatcgaatccacatggatcgtcgtttcgtccaaacaattaacgttacttattttt 7495094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 10745040 - 10745073
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||| ||||||||||||||||||    
T  10745040 ttgcaatttttatctatttgcaacagagcaagtt 10745073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 16245690 - 16245657
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||| ||||||||||||||||||    
T  16245690 ttgcaatttttatctatttgcaacagagcaagtt 16245657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 21325480 - 21325513
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||| ||||||||||||||||||    
T  21325480 ttgcaatttttatctatttgcaacagagcaagtt 21325513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 5508477 - 5508516
Alignment:
Q  92 aatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  5508477 aatttttatctgtttgcaatagagcaag-ttacatgttttt 5508516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 19925576 - 19925540
Alignment:
Q  95 ttttatctgtttgcaacagagcaagtttacatgtttt 131  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  19925576 ttttatatgtttgcaacagagcaagtttacctgtttt 19925540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 482 - 612
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaattttta 99  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||   || | |||||||||||| |||||||  |||||||| || |||||||||||||    
T  482 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttgtaagttttgacagtataaaag-taagttgcaattttta 580  T
Q  100 tctgtttgcaacagagcaagtttacatgtttt 131  Q
    ||||||||||||||||| | ||||| ||||||    
T  581 tctgtttgcaacagagcgaatttacctgtttt 612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 882 - 739
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat------------aggt 88  Q
    ||||||||||||||| |  | |||||||||||||||||||||||   ||| |||||||||| ||| ||||||||||||||||||            || |    
T  882 gtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttatttttataagtttgacgatataaaagataagggtttagaaagat 783  T
Q  89 tgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  782 tgcaatttttatctgtttgcaacagagaaagtttacctgttttt 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 69957 - 70094
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat-----------aggttgcaa 93  Q
    ||||||||||  ||| |||||||||||||||||||||||||  ||| |||||||||||| || |||| ||||||||||||           |||||||||    
T  69957 agtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatttttgt-atgttgatgatataaaagataaaggttagaaaggttgcaa 70055  T
Q  94 tttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||| ||||||||| ||||||||||||| |||||||    
T  70056 tttttatttgtttgcaatagagcaagtttacctgttttt 70094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 98719 - 98779
Alignment:
Q  52 acttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagag 115  Q
    ||||||||||||| ||| |||||||||||||   ||||||||||||||||||||| ||| ||||    
T  98719 acttatttttgtagttt-gacgatataaaagt--ggttgcaatttttatctgtttacaatagag 98779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 234385 - 234490
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgt 104  Q
    ||||||||| | |||| ||||||| |||||||| |||||||   || |||||||||||||| ||| ||  |||||||| ||  |||||||||||||||||    
T  234385 agtatcgtacccacagagattgtcctttcgtccgaacaattcttgtcacttatttttgtaagtttaactctataaaagttatattgcaatttttatctgt 234484  T
Q  105 ttgcaa 110  Q
    ||||||    
T  234485 ttgcaa 234490  T

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Target: scaffold1869 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 448 - 404
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 45  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  448 gtagagtatcgtatcaacagggattgtcatttcgtccaaacaatt 404  T

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Target: scaffold0054 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 72148 - 72193
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttta 133  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||    
T  72148 ttgcaatttttatctgtttgcaacagagcaagtttacgtattttta 72193  T

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Target: scaffold0034 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 76458 - 76586
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||| |||| |||||||||||  |||||||| |||||||   || |||||||||||||   |||| | |||||||| || ||||||| ||||||    
T  76458 gtagagtatcatatccacagggattgttctttcgtccgaacaattcttgttacttatttttgta--gttgagggtataaaagtta-gttgcaaattttat 76554  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
     ||||| ||||| ||||| ||||| |||||||    
T  76555 atgtttacaacatagcaaatttacctgttttt 76586  T

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Target: scaffold0622 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 768 - 811
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 44  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  768 gtagagtattgtatcaacaaggattgtcgtttcgtccaaacaat 811  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 69218 - 69264
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttac 134  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||||    
T  69218 ttgcaatttttatctgtttgcaacagagaaagtttacctgttcttac 69264  T

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Target: scaffold0386 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 6098 - 6022
Alignment:
Q  55 tatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 132  Q
    ||||||||||| ||||| | ||||||||  || ||||||||||||||||||||||| ||||| | ||||| |||||||    
T  6098 tatttttgtaagtttgaaggtataaaagtgag-ttgcaatttttatctgtttgcaatagagcgaatttacttgttttt 6022  T

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Target: scaffold0386; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 6762 - 6632
Alignment:
Q  1 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttat 100  Q
    |||||||||| |||| ||||||| |||   ||||||| |||||||   || || || |||| ||| ||||| ||||||||||  || |||||||||||||    
T  6762 gtagagtatcatatccacagggactgttcattcgtccgaacaattctagttacctagttttataagtttgatgatataaaagtgag-ttgcaatttttat 6664  T
Q  101 ctgtttgcaacagagcaagtttacatgttttt 132  Q
    |||||||||| ||||  | ||||| |||||||    
T  6663 ctgtttgcaatagagtgaatttacttgttttt 6632  T

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Target: scaffold0062 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 43187 - 43154
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  43187 ttgcaatttttatctgtttgcaacagagcaagtt 43154  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 39724 - 39757
Alignment:
Q  88 ttgcaatttttatctgtttgcaacagagcaagtt 121  Q
    ||||||||||||||||||||||||||||||||||    
T  39724 ttgcaatttttatctgtttgcaacagagcaagtt 39757  T

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Target: scaffold0427 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 2874 - 2818
Alignment:
Q  4 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    |||||||||||| ||| | ||||||||||||||||||||||| | || |||||||||    
T  2874 gagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttatttt 2818  T

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Target: scaffold0650 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 6331 - 6385
Alignment:
Q  5 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 59  Q
    ||||||||||| ||| ||||||| ||||||||||||||||| || | ||||||||    
T  6331 agtatcgtatccacatggattgttgtttcgtccaaacaattcgcattacttattt 6385  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 35578 - 35636
Alignment:
Q  2 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 60  Q
    |||||||| ||||| ||| ||||| ||||||||||||||||||| || | |||||||||    
T  35578 tagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttatttt 35636  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 121
Target Start/End: Complemental strand, 168256 - 168226
Alignment:
Q  91 caatttttatctgtttgcaacagagcaagtt 121  Q
    |||||||||||||||||||||||||||||||    
T  168256 caatttttatctgtttgcaacagagcaagtt 168226  T

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