View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16695_high_14 (Length: 242)
Name: NF16695_high_14
Description: NF16695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16695_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 393823 - 394012
Alignment:
| Q |
16 |
aatactcatttgataattatcatttactcaagagcttatagcttattttatcttagtgaacttatagtgtttttataagctaaatcaagttgtttatagt |
115 |
Q |
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| T |
393823 |
aatactcatttgataattatcatttactcaagagcttatagcttatcttatcttagtgaacttatagtgtttttataagctaaatcaagttgtttatagt |
393922 |
T |
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| Q |
116 |
ttaaagattaaagtttacaaattcaatcagataattaatcaaatataaaaatcattctaaacgagtttatcaactatcctttctttttgg |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
393923 |
ttaaagattaaagtttacaaattcaatcagataattaatcaaatataaaaatcattctaaacgagtttatcaaccatcctttctttttgg |
394012 |
T |
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