View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16695_low_7 (Length: 500)
Name: NF16695_low_7
Description: NF16695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16695_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 463; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 19 - 485
Target Start/End: Original strand, 34409546 - 34410012
Alignment:
| Q |
19 |
aacatcttctaataagcgttttccacaaaaattgaaggagcaagcatgatatatagaaggaattttacctaaaataacgacgtagttagaattgcagacc |
118 |
Q |
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| T |
34409546 |
aacatcttctaataagcgttttccacaaaaattgaaggagcaagcatgatatatagaaggaattttacctaaaataacgacgtagttagaattgcagacc |
34409645 |
T |
|
| Q |
119 |
aaacaagaactacaatccacactaaaaactatgagaaagaaagaacaagcatttactatcatacattaattcagttccttcactcatttgtatgcctgta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34409646 |
aaacaagaactacaatccacactaaaaactatgagaaagaaagaacaagcatttactatcatacattaattcagttccttcactcatttgtatgcctgta |
34409745 |
T |
|
| Q |
219 |
atgataagtgaaacatgtcccaaattttgtaacttgtcaactttttctccactttgtgatatgaatatctgagttttccttgtaagacataccatttgtt |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
34409746 |
atgataagtgaaacatgtcccaaattttgtaacttgtcaactttttctccactttgtgatatgaatatctgagttttccttgtgagacataccatttgtt |
34409845 |
T |
|
| Q |
319 |
tgtttccctttacaacttccattataaatcaaatcactacccttacccttttctcaagtcacctcattcgttagcgaaaacagcatgccaaatggatctg |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34409846 |
tgtttccctttacaacttccattataaatcaaatcactacccttacccttttctcaagtcacctcattcgttagcgaaaacagcatgccaaatggatctg |
34409945 |
T |
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| Q |
419 |
caccaaaaaatagtttagacattgtaggaatcattgtctgaatctcacaagtcctcaagtttctgtg |
485 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34409946 |
caccaaaaaatagtttagacattgtaggaatcattgtctgaatctcacaagtcctcaagtttctgtg |
34410012 |
T |
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