View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16696_high_14 (Length: 241)

Name: NF16696_high_14
Description: NF16696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16696_high_14
NF16696_high_14
[»] chr2 (47 HSPs)
chr2 (185-239)||(13561991-13562045)
chr2 (185-239)||(43427389-43427443)
chr2 (186-239)||(16792481-16792534)
chr2 (186-239)||(43971502-43971555)
chr2 (186-236)||(12394026-12394076)
chr2 (186-239)||(4133022-4133075)
chr2 (186-239)||(6220506-6220559)
chr2 (186-239)||(12342091-12342144)
chr2 (186-239)||(16807619-16807672)
chr2 (186-239)||(16846900-16846953)
chr2 (186-239)||(29396782-29396835)
chr2 (186-239)||(45301763-45301816)
chr2 (187-239)||(27964472-27964524)
chr2 (186-236)||(4051809-4051859)
chr2 (186-236)||(12566085-12566135)
chr2 (186-236)||(35799201-35799251)
chr2 (186-236)||(36177974-36178024)
chr2 (186-239)||(441333-441386)
chr2 (186-239)||(4288813-4288866)
chr2 (186-239)||(18579165-18579218)
chr2 (186-239)||(22620436-22620489)
chr2 (186-239)||(34546433-34546486)
chr2 (187-239)||(5717512-5717564)
chr2 (189-239)||(9391660-9391710)
chr2 (185-239)||(17703016-17703070)
chr2 (189-239)||(45082002-45082052)
chr2 (186-239)||(7028914-7028967)
chr2 (186-239)||(17695927-17695980)
chr2 (194-239)||(18719534-18719579)
chr2 (186-239)||(25383586-25383639)
chr2 (186-239)||(29411694-29411747)
chr2 (186-239)||(29808810-29808863)
chr2 (186-239)||(32228113-32228166)
chr2 (189-236)||(14285939-14285986)
chr2 (188-235)||(30855105-30855152)
chr2 (186-233)||(38926604-38926651)
chr2 (186-236)||(777768-777818)
chr2 (193-239)||(16463134-16463180)
chr2 (189-239)||(19164358-19164408)
chr2 (186-236)||(28072565-28072615)
chr2 (193-239)||(40608706-40608751)
chr2 (186-239)||(4469499-4469552)
chr2 (186-239)||(7042288-7042341)
chr2 (186-239)||(8540036-8540089)
chr2 (186-239)||(14833837-14833890)
chr2 (186-235)||(35046516-35046565)
chr2 (189-233)||(11188600-11188644)
[»] chr1 (44 HSPs)
chr1 (185-239)||(50249307-50249361)
chr1 (186-239)||(29567894-29567947)
chr1 (186-239)||(32807038-32807091)
chr1 (186-239)||(34047335-34047388)
chr1 (185-239)||(12591182-12591236)
chr1 (185-239)||(15823031-15823085)
chr1 (185-239)||(26352181-26352235)
chr1 (186-239)||(5463573-5463626)
chr1 (190-239)||(24611620-24611669)
chr1 (186-239)||(34032180-34032233)
chr1 (191-239)||(50094232-50094280)
chr1 (186-237)||(48025356-48025407)
chr1 (186-236)||(15573605-15573655)
chr1 (186-239)||(16757294-16757347)
chr1 (186-239)||(26755218-26755271)
chr1 (186-239)||(38531397-38531450)
chr1 (186-239)||(44258607-44258660)
chr1 (186-239)||(49468811-49468864)
chr1 (186-236)||(1740744-1740794)
chr1 (185-239)||(9915440-9915494)
chr1 (189-239)||(10842781-10842831)
chr1 (193-239)||(25487093-25487139)
chr1 (186-236)||(27208987-27209037)
chr1 (185-239)||(44557144-44557198)
chr1 (186-236)||(46045971-46046021)
chr1 (194-239)||(14593420-14593465)
chr1 (186-239)||(24483386-24483439)
chr1 (186-239)||(31798587-31798640)
chr1 (186-239)||(35848033-35848086)
chr1 (190-239)||(40717396-40717445)
chr1 (186-239)||(44108597-44108650)
chr1 (186-239)||(48009008-48009061)
chr1 (187-239)||(26595169-26595221)
chr1 (186-234)||(30292938-30292986)
chr1 (187-239)||(39125647-39125699)
chr1 (196-239)||(34110535-34110578)
chr1 (186-241)||(52125234-52125289)
chr1 (186-236)||(46554796-46554846)
chr1 (186-239)||(13408365-13408418)
chr1 (186-239)||(18794642-18794694)
chr1 (194-239)||(25151821-25151866)
chr1 (186-239)||(31491870-31491923)
chr1 (188-236)||(46271420-46271468)
chr1 (187-239)||(49402971-49403023)
[»] scaffold0110 (1 HSPs)
scaffold0110 (186-239)||(24842-24895)
[»] scaffold0078 (1 HSPs)
scaffold0078 (186-239)||(1515-1568)
[»] chr8 (31 HSPs)
chr8 (186-239)||(15160548-15160601)
chr8 (186-239)||(29025848-29025901)
chr8 (186-239)||(39463257-39463310)
chr8 (186-239)||(39698768-39698821)
chr8 (191-239)||(5295508-5295556)
chr8 (186-236)||(9812171-9812221)
chr8 (189-239)||(43974893-43974943)
chr8 (186-239)||(4989476-4989529)
chr8 (186-239)||(6374412-6374465)
chr8 (186-239)||(39765961-39766014)
chr8 (186-239)||(40228572-40228625)
chr8 (186-236)||(43448714-43448764)
chr8 (186-239)||(7839456-7839509)
chr8 (186-239)||(9304735-9304788)
chr8 (186-239)||(17920954-17921007)
chr8 (186-239)||(34796780-34796833)
chr8 (186-239)||(40362433-40362486)
chr8 (186-241)||(43724379-43724434)
chr8 (185-239)||(31693723-31693777)
chr8 (189-239)||(35356308-35356358)
chr8 (193-239)||(43084729-43084775)
chr8 (186-239)||(9880603-9880656)
chr8 (186-239)||(37559635-37559688)
chr8 (186-230)||(14234329-14234373)
chr8 (187-239)||(40400441-40400493)
chr8 (186-239)||(396315-396369)
chr8 (185-239)||(19438233-19438287)
chr8 (186-236)||(44713532-44713582)
chr8 (186-239)||(4760660-4760713)
chr8 (186-239)||(6116107-6116160)
chr8 (196-233)||(31234047-31234084)
[»] chr7 (45 HSPs)
chr7 (186-239)||(22297994-22298047)
chr7 (186-239)||(45948730-45948783)
chr7 (185-239)||(715963-716017)
chr7 (186-236)||(24780409-24780459)
chr7 (185-239)||(34274791-34274845)
chr7 (186-239)||(1741989-1742042)
chr7 (186-239)||(12977786-12977839)
chr7 (186-239)||(19105101-19105154)
chr7 (185-237)||(18270574-18270626)
chr7 (188-236)||(40927163-40927211)
chr7 (186-237)||(18292333-18292384)
chr7 (186-236)||(35777817-35777867)
chr7 (186-239)||(2297036-2297089)
chr7 (186-239)||(13405227-13405280)
chr7 (186-239)||(24680126-24680179)
chr7 (190-239)||(37502321-37502370)
chr7 (186-239)||(42880034-42880087)
chr7 (187-239)||(10599212-10599264)
chr7 (191-239)||(48684726-48684774)
chr7 (193-239)||(10476141-10476187)
chr7 (186-236)||(27935765-27935815)
chr7 (193-239)||(27947601-27947647)
chr7 (191-233)||(29636333-29636375)
chr7 (185-239)||(31418613-31418667)
chr7 (186-236)||(34012159-34012209)
chr7 (186-235)||(6747225-6747274)
chr7 (186-239)||(8603973-8604026)
chr7 (186-239)||(33939834-33939887)
chr7 (186-239)||(37490782-37490835)
chr7 (186-239)||(41137726-41137779)
chr7 (186-239)||(42285906-42285959)
chr7 (185-238)||(48843549-48843602)
chr7 (194-234)||(44453141-44453181)
chr7 (186-225)||(16565214-16565253)
chr7 (186-225)||(16600409-16600448)
chr7 (190-237)||(21752213-21752260)
chr7 (200-239)||(25440884-25440923)
chr7 (186-236)||(1031153-1031203)
chr7 (185-231)||(42753705-42753751)
chr7 (185-239)||(44567141-44567195)
chr7 (186-239)||(23935420-23935473)
chr7 (186-239)||(24133230-24133283)
chr7 (186-239)||(37815722-37815775)
chr7 (186-239)||(45499927-45499980)
chr7 (186-234)||(40339457-40339505)
[»] chr6 (20 HSPs)
chr6 (186-239)||(234032-234085)
chr6 (186-239)||(4850597-4850650)
chr6 (187-236)||(13503953-13504002)
chr6 (186-239)||(29399944-29399997)
chr6 (185-239)||(32193699-32193753)
chr6 (186-239)||(18737192-18737245)
chr6 (190-239)||(19674982-19675031)
chr6 (186-239)||(24163816-24163869)
chr6 (186-239)||(32429282-32429335)
chr6 (186-236)||(12063615-12063665)
chr6 (190-239)||(12459420-12459469)
chr6 (186-235)||(23259431-23259480)
chr6 (190-239)||(29713508-29713557)
chr6 (190-229)||(12322996-12323035)
chr6 (186-236)||(10540613-10540663)
chr6 (186-236)||(31443551-31443601)
chr6 (186-235)||(9940646-9940695)
chr6 (187-216)||(17246732-17246761)
chr6 (193-241)||(12588531-12588579)
chr6 (186-238)||(19600419-19600471)
[»] chr5 (35 HSPs)
chr5 (186-239)||(3025033-3025086)
chr5 (186-239)||(7317026-7317079)
chr5 (186-239)||(10345034-10345087)
chr5 (186-239)||(42104165-42104218)
chr5 (189-239)||(14620596-14620646)
chr5 (185-239)||(21319412-21319466)
chr5 (185-239)||(39566180-39566234)
chr5 (186-239)||(2729888-2729941)
chr5 (186-239)||(24280991-24281044)
chr5 (186-239)||(24381168-24381221)
chr5 (193-239)||(27797786-27797832)
chr5 (186-239)||(6518974-6519027)
chr5 (187-236)||(15167115-15167164)
chr5 (186-239)||(25362902-25362955)
chr5 (186-236)||(34208999-34209052)
chr5 (193-239)||(3306111-3306157)
chr5 (186-236)||(7721094-7721144)
chr5 (189-239)||(21195380-21195430)
chr5 (186-239)||(39504720-39504774)
chr5 (189-239)||(39729960-39730010)
chr5 (186-239)||(4911252-4911305)
chr5 (186-239)||(13761555-13761608)
chr5 (186-239)||(26660753-26660806)
chr5 (186-239)||(26932346-26932399)
chr5 (190-239)||(35766002-35766051)
chr5 (186-239)||(36073732-36073785)
chr5 (187-235)||(38362243-38362291)
chr5 (193-239)||(14162003-14162049)
chr5 (193-239)||(36164892-36164938)
chr5 (186-239)||(7579971-7580024)
chr5 (186-239)||(9066525-9066578)
chr5 (190-239)||(11977590-11977639)
chr5 (193-239)||(29807417-29807465)
chr5 (186-239)||(34446129-34446182)
chr5 (186-239)||(38369871-38369923)
[»] chr4 (47 HSPs)
chr4 (186-239)||(4505335-4505388)
chr4 (186-239)||(19451317-19451370)
chr4 (186-239)||(51733600-51733653)
chr4 (186-239)||(52957896-52957949)
chr4 (186-239)||(1819560-1819613)
chr4 (186-239)||(10573260-10573313)
chr4 (186-239)||(19878646-19878699)
chr4 (186-239)||(37624554-37624607)
chr4 (186-239)||(40345453-40345506)
chr4 (186-239)||(52253843-52253896)
chr4 (186-239)||(52915648-52915701)
chr4 (191-239)||(39982106-39982154)
chr4 (186-236)||(29519634-29519684)
chr4 (186-236)||(40837128-40837178)
chr4 (186-236)||(49080586-49080635)
chr4 (186-236)||(49089462-49089512)
chr4 (190-239)||(2728504-2728553)
chr4 (186-239)||(19930712-19930765)
chr4 (186-239)||(20448037-20448090)
chr4 (186-239)||(24157183-24157236)
chr4 (186-239)||(25231173-25231226)
chr4 (186-239)||(30261257-30261310)
chr4 (191-239)||(50621293-50621341)
chr4 (189-239)||(7906102-7906152)
chr4 (193-239)||(21864489-21864535)
chr4 (193-239)||(21920350-21920396)
chr4 (185-239)||(24940876-24940930)
chr4 (186-236)||(34413656-34413706)
chr4 (185-239)||(44061005-44061059)
chr4 (194-236)||(45839643-45839685)
chr4 (186-239)||(2493100-2493153)
chr4 (186-239)||(44571971-44572024)
chr4 (186-239)||(45043694-45043747)
chr4 (186-239)||(47817736-47817789)
chr4 (186-239)||(52848160-52848213)
chr4 (186-230)||(33033076-33033120)
chr4 (193-236)||(620287-620330)
chr4 (186-233)||(27943658-27943705)
chr4 (186-236)||(27653674-27653724)
chr4 (186-239)||(50203074-50203125)
chr4 (186-236)||(53814606-53814656)
chr4 (186-239)||(22220465-22220518)
chr4 (186-239)||(41496203-41496256)
chr4 (186-239)||(41920415-41920468)
chr4 (186-239)||(54042289-54042342)
chr4 (186-230)||(28734596-28734640)
chr4 (187-239)||(56460082-56460134)
[»] chr3 (40 HSPs)
chr3 (186-239)||(19115385-19115438)
chr3 (186-239)||(38016373-38016426)
chr3 (186-239)||(45213821-45213874)
chr3 (185-239)||(44676218-44676272)
chr3 (186-239)||(2458005-2458058)
chr3 (186-239)||(3152905-3152958)
chr3 (186-239)||(30426423-30426476)
chr3 (186-239)||(42571628-42571681)
chr3 (186-239)||(42886749-42886802)
chr3 (186-239)||(47895443-47895496)
chr3 (186-239)||(48901718-48901771)
chr3 (186-239)||(48903284-48903337)
chr3 (186-239)||(50646209-50646262)
chr3 (187-239)||(7230995-7231047)
chr3 (186-239)||(30315307-30315360)
chr3 (186-239)||(32492280-32492333)
chr3 (187-236)||(38140949-38140998)
chr3 (186-239)||(41850388-41850441)
chr3 (186-239)||(50038270-50038323)
chr3 (186-239)||(53200779-53200832)
chr3 (187-239)||(36460805-36460857)
chr3 (191-239)||(36729909-36729957)
chr3 (185-239)||(11393542-11393596)
chr3 (186-239)||(23208390-23208441)
chr3 (189-239)||(30431121-30431171)
chr3 (186-236)||(33194133-33194183)
chr3 (189-239)||(40487829-40487879)
chr3 (186-239)||(4392194-4392247)
chr3 (186-239)||(4758989-4759042)
chr3 (186-239)||(42071983-42072036)
chr3 (186-239)||(50088415-50088468)
chr3 (186-239)||(51398008-51398061)
chr3 (188-236)||(38363785-38363833)
chr3 (193-239)||(9189534-9189580)
chr3 (193-239)||(33024399-33024445)
chr3 (186-236)||(47137961-47138011)
chr3 (186-239)||(31853661-31853714)
chr3 (186-239)||(36844841-36844894)
chr3 (186-239)||(39356883-39356936)
chr3 (186-239)||(47823550-47823603)
[»] scaffold0332 (1 HSPs)
scaffold0332 (185-239)||(3912-3966)
[»] scaffold0294 (1 HSPs)
scaffold0294 (189-239)||(3606-3656)
[»] scaffold0565 (1 HSPs)
scaffold0565 (186-239)||(9743-9796)
[»] scaffold0182 (1 HSPs)
scaffold0182 (190-239)||(18356-18405)
[»] scaffold0048 (1 HSPs)
scaffold0048 (186-239)||(62631-62684)
[»] scaffold2107 (1 HSPs)
scaffold2107 (193-239)||(615-661)
[»] scaffold0300 (1 HSPs)
scaffold0300 (189-239)||(4566-4616)
[»] scaffold0502 (1 HSPs)
scaffold0502 (193-239)||(673-719)
[»] scaffold0015 (1 HSPs)
scaffold0015 (193-239)||(21183-21229)
[»] scaffold0983 (1 HSPs)
scaffold0983 (186-239)||(788-841)


Alignment Details
Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 13561991 - 13562045
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13561991 tttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttctt 13562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 43427443 - 43427389
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  43427443 tttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43427389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 16792481 - 16792534
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  16792481 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 16792534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 43971502 - 43971555
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43971555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 12394076 - 12394026
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  12394076 ttgtttcaaaatgaatgttactttcagtttctaatgcaataataacttttt 12394026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 4133022 - 4133075
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  4133022 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 4133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 6220559 - 6220506
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  6220559 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 6220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 12342091 - 12342144
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  12342091 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 12342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 16807672 - 16807619
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  16807672 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16807619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 16846953 - 16846900
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  16846953 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16846900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 29396835 - 29396782
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  29396835 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 29396782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 45301763 - 45301816
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45301816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 27964524 - 27964472
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||||||||    
T  27964524 tgtttcgaaatgaatgtcacttttagtttccaatgcaataataactttttctt 27964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 4051859 - 4051809
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 4051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 12566135 - 12566085
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 12566085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 35799201 - 35799251
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataacttttt 35799251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 36177974 - 36178024
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  36177974 ttgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttt 36178024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 441386 - 441333
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||  ||||  ||||||||||||||||||||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttctt 441333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 4288866 - 4288813
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| ||||||  |||||||||||||||||||| ||||||||    
T  4288866 ttgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttctt 4288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 18579165 - 18579218
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 18579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 22620489 - 22620436
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||| |||| |||| |||||| ||||||||||||||||||||||    
T  22620489 ttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttctt 22620436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 34546486 - 34546433
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | |||| ||||||||||||| ||||||||    
T  34546486 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 34546433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 5717512 - 5717564
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 5717564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 9391710 - 9391660
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| ||| ||||| |||||||||||||| ||||||||    
T  9391710 tttcaaaatgaatgtcattttcagtttttaatgcaataataattttttctt 9391660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 17703016 - 17703070
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||||||||||| | |||  ||||||||||||||||||||||    
T  17703016 tttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 17703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 45082052 - 45082002
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||| ||||||||||||||| |||||| ||||||||||||| ||||||||    
T  45082052 tttcacaatgaatgtcactttcagtttccaatgcaataataattttttctt 45082002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 7028967 - 7028914
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| | |||| ||||||||||| ||||||||||    
T  7028967 ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttctt 7028914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 17695980 - 17695927
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||| ||||||||| |||||| ||||  ||||||||||||||||    
T  17695980 ttgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttctt 17695927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 18719579 - 18719534
Alignment:
Q  194 aaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||    
T  18719579 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 18719534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 25383639 - 25383586
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||| | ||| |||||| ||||||||||||||||||||||    
T  25383639 ttgttttaaaatgaatgttattttcagtttccaatgcaataataactttttctt 25383586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 29411694 - 29411747
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||| |||||||    
T  29411694 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctt 29411747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 29808810 - 29808863
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||  |||||||| |||||||||||||    
T  29808810 ttgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttctt 29808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 32228166 - 32228113
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||||||||||||  ||||  ||||||||||||||||||||||    
T  32228166 ttgttttaaaatgaatgtcacttttggttttaaatgcaataataactttttctt 32228113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 14285939 - 14285986
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||||||||||||||| ||| |||||| ||| |||||||||||||||    
T  14285939 tttcaaaatgaatgtcattttcagtttccaatacaataataacttttt 14285986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 30855105 - 30855152
Alignment:
Q  188 gtttcaaaatgaatgtcactttaagtttctaatgcaataataactttt 235  Q
    |||||||||||||||||||| | |||||| ||||||||||||| ||||    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataattttt 30855152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 38926604 - 38926651
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactt 233  Q
    |||||| ||||||||||||||||| |||||  ||||||||||||||||    
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 38926651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 777768 - 777818
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||||||||||| ||| | ||||||||||||||||||| ||||    
T  777768 ttgttttaaaatgaatgtcattttcaatttctaatgcaataataacctttt 777818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 16463180 - 16463134
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||| ||||||||||| |||||  ||||||||||||||||||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttctt 16463134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 19164358 - 19164408
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||| || ||| | ||| |||||||||||||||||||||||    
T  19164358 tttcaaaatgaatggcaatttcaatttttaatgcaataataactttttctt 19164408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 28072565 - 28072615
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||||||||||||||| |||||  ||| |||||||||||||||    
T  28072565 ttgttttaaaatgaatgtcactttcagttttcaatacaataataacttttt 28072615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 40608751 - 40608706
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  40608751 aaaatgaatgtcactttcagtttc-aatgcaataataactttctctt 40608706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 4469499 - 4469552
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||| ||||||| |||||  ||| ||||||||||||||||||    
T  4469499 ttgttttaaaatgaatttcactttcagttttcaatacaataataactttttctt 4469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 7042341 - 7042288
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| | || | ||||||||||| ||||||||||    
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctt 7042288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 8540036 - 8540089
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||||| || ||| |||||| | ||||||||||||||||||||    
T  8540036 ttgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctt 8540089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 14833890 - 14833837
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| | |||  ||||||| ||||||||||||||    
T  14833890 ttgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 35046516 - 35046565
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttt 235  Q
    |||||| || |||||||||||||| | |||| ||||||||||||||||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataactttt 35046565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 11188644 - 11188600
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactt 233  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||    
T  11188644 tttcaaaatgaatgtcactttcagttttcaatgcaacaataactt 11188600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 50249307 - 50249361
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  50249307 tttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 29567894 - 29567947
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  29567894 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 29567947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 32807091 - 32807038
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  32807091 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 32807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 34047388 - 34047335
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  34047388 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 34047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 12591236 - 12591182
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  12591236 tttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 12591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 15823031 - 15823085
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  15823031 tttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15823085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 26352235 - 26352181
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  26352235 tttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 26352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 5463573 - 5463626
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  5463573 ttgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttctt 5463626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 24611669 - 24611620
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  24611669 ttcaaaatgaatgtcacttttagtttctaatgtaataataactttttctt 24611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 34032233 - 34032180
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  34032233 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 34032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 50094232 - 50094280
Alignment:
Q  191 tcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  50094232 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 48025407 - 48025356
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttc 237  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  48025407 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttc 48025356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 15573605 - 15573655
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  15573605 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 16757347 - 16757294
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||| |||||    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattctt 16757294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 26755218 - 26755271
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||| || |||||||||||||||    
T  26755218 ttgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttctt 26755271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 38531450 - 38531397
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||| ||||||||    
T  38531450 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 38531397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 44258660 - 44258607
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 44258607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 49468864 - 49468811
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||| |||||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttctt 49468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 1740794 - 1740744
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||||||||||||||| |||||| |||| ||||||||||||||    
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataacttttt 1740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 9915440 - 9915494
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||||||| ||| |||||| ||||||||||||| ||||||||    
T  9915440 tttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttctt 9915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 10842781 - 10842831
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||| |||||  |||||||||||||| |||||||    
T  10842781 tttcaaaatgaatgtcactttcagttttcaatgcaataataacattttctt 10842831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 25487093 - 25487139
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  25487093 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 25487139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 27208987 - 27209037
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||||| ||||||||||||||||  ||||| |||||||||||||||||||    
T  27208987 ttgtttcgaaatgaatgtcactttcggtttccaatgcaataataacttttt 27209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 44557198 - 44557144
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||||||||||| ||| || |||||||||||||| |||||||    
T  44557198 tttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttctt 44557144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 46045971 - 46046021
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||||| |||||   ||||||||||||||||||    
T  46045971 ttgtttcaaaatgaatgtcactttcagttttcgatgcaataataacttttt 46046021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 14593465 - 14593420
Alignment:
Q  194 aaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttctt 14593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 24483386 - 24483439
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| |||||| ||| ||||||||||| ||||||    
T  24483386 ttgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttctt 24483439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 31798587 - 31798640
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||| |||||||| ||||||  || ||||||||||||||||||    
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttctt 31798640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 35848086 - 35848033
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||| ||||||||||||| |||||  ||||||||||||||||||||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttctt 35848033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 40717445 - 40717396
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  40717445 ttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 40717396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 44108597 - 44108650
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||| ||||||||||| |||||| ||| ||||||||||||||||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttctt 44108650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 48009008 - 48009061
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||||| || ||| ||||| |||||||||||||||||||||||    
T  48009008 ttgttttaaaatgaatggcatttttagtttttaatgcaataataactttttctt 48009061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 26595221 - 26595169
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||| ||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttctt 26595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 30292938 - 30292986
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttt 234  Q
    |||||| |||||||||| |||||| |||||| |||||||||||||||||    
T  30292938 ttgttttaaaatgaatgccactttcagtttccaatgcaataataacttt 30292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 39125647 - 39125699
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||| ||||| |||||||||  ||||||||||||| ||||||||    
T  39125647 tgtttcaaaatgactgtcattttaagttttcaatgcaataataaatttttctt 39125699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 34110535 - 34110578
Alignment:
Q  196 atgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctt 34110578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 52125289 - 52125234
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttcttct 241  Q
    ||||||| |||||||||||| ||| |||||| ||||||||||||| ||||| ||||    
T  52125289 ttgtttcgaaatgaatgtcaatttcagtttccaatgcaataataattttttattct 52125234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 46554796 - 46554846
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| |||||||||||||| || |||||| | |||||||||||||||||    
T  46554796 ttgttttaaaatgaatgtcaccttcagtttccactgcaataataacttttt 46554846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 13408418 - 13408365
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||| | ||||| |||||  ||||||||||||||||||||||    
T  13408418 ttgttttaaaatgaattttactttcagttttcaatgcaataataactttttctt 13408365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 18794694 - 18794642
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||| ||||||| ||| |||||| ||||||||||||||||||||||    
T  18794694 ttgttttaaaataaatgtca-tttcagtttcgaatgcaataataactttttctt 18794642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 25151821 - 25151866
Alignment:
Q  194 aaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||  ||||| |||||||||||||| |||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttctt 25151866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 31491923 - 31491870
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | |||  ||||  ||||||||||||||||    
T  31491923 ttgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttctt 31491870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 46271468 - 46271420
Alignment:
Q  188 gtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||| ||| |||||| |||| |||||||| |||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataatttttt 46271420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 49403023 - 49402971
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||| ||| ||  ||| |||||| ||||||||||||||||||||||    
T  49403023 tgtttcaaaataaatatcgttttcagtttccaatgcaataataactttttctt 49402971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 24895 - 24842
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  24895 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 24842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 1568 - 1515
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  1568 ttgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttctt 1515  T

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Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 15160601 - 15160548
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  15160601 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15160548  T

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Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 29025901 - 29025848
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  29025901 ttgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttctt 29025848  T

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Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 39463257 - 39463310
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  39463257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39463310  T

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Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 39698821 - 39698768
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  39698821 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39698768  T

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Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 5295556 - 5295508
Alignment:
Q  191 tcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5295556 tcaaaatgaatgtcactttaagtttctaatgcaataataattttttctt 5295508  T

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Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 9812171 - 9812221
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataacttttt 9812221  T

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Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 43974943 - 43974893
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  43974943 tttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 43974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 4989476 - 4989529
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  4989476 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttctt 4989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 6374412 - 6374465
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 6374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 39766014 - 39765961
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  39766014 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 39765961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 40228572 - 40228625
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  40228572 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40228625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 43448714 - 43448764
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttt 43448764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 7839456 - 7839509
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | |||| |||||||||||||| |||||||    
T  7839456 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttctt 7839509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 9304788 - 9304735
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  9304788 ttgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttctt 9304735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 17920954 - 17921007
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  17920954 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 17921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 34796833 - 34796780
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||  |||| |||||||||||||||||||| ||||||||    
T  34796833 ttgtttcaaaatgaatgttccttttagtttctaatgcaataataattttttctt 34796780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 40362433 - 40362486
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 43724379 - 43724434
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttcttct 241  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||| ||||| ||||    
T  43724379 ttgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttct 43724434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 31693777 - 31693723
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  31693777 tttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttctt 31693723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 35356308 - 35356358
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  35356308 tttcaaaatgaatatcattttcagtttccaatgcaataataactttttctt 35356358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 43084775 - 43084729
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  43084775 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 43084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 9880656 - 9880603
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||   |||||| ||||||||||||| ||||||||    
T  9880656 ttgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttctt 9880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 37559688 - 37559635
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||| ||||||||||| |||||| ||| ||||||||||||||||||    
T  37559688 ttgttttaaaatcaatgtcactttcagtttccaatacaataataactttttctt 37559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 14234373 - 14234329
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataa 230  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||    
T  14234373 ttgttttaaaatgaatgtcacttttaatttctaatgcaataataa 14234329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 40400441 - 40400493
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||| ||||||||||||||||| ||||||||||  |||||||| ||||||||    
T  40400441 tgttttaaaatgaatgtcacttttagtttctaatataataataattttttctt 40400493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 396369 - 396315
Alignment:
Q  186 ttgtttcaaaatgaatgtcacttta-agtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||||||||||||  |||||  ||||||||||||||||||||||    
T  396369 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 19438233 - 19438287
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||| |||| ||||||||| | |||||| |||| |||||||||||||||||    
T  19438233 tttgtttcgaaataaatgtcactctcagtttccaatgtaataataactttttctt 19438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 44713532 - 44713582
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||||||| ||||||| | |||| |||||||||||||||||||    
T  44713532 ttgttttaaaatgaatatcactttcattttccaatgcaataataacttttt 44713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 4760713 - 4760660
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| | |||| ||||||| ||||| ||||||||    
T  4760713 ttgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttctt 4760660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 6116160 - 6116107
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||| |||||||  ||||  ||||||||||||||||||||||    
T  6116160 ttgttttaaaatgaatatcactttcggttttcaatgcaataataactttttctt 6116107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 31234084 - 31234047
Alignment:
Q  196 atgaatgtcactttaagtttctaatgcaataataactt 233  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  31234084 atgaatgtcacttttagtttttaatgcaataataactt 31234047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 22297994 - 22298047
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  22297994 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 22298047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 45948783 - 45948730
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  45948783 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 716017 - 715963
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  716017 tttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 24780459 - 24780409
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  24780459 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataatttttt 24780409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 34274791 - 34274845
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  34274791 tttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 34274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 1741989 - 1742042
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  1741989 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 1742042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 12977839 - 12977786
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  12977839 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 12977786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 19105154 - 19105101
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttctt 19105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 18270574 - 18270626
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttc 237  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  18270574 tttggttcaaaatgaatgtcactttcagtttccaatgcaataataactttttc 18270626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  188 gtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 18292333 - 18292384
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttc 237  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttc 18292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 35777817 - 35777867
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataacttttt 35777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 2297036 - 2297089
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||  |||||||||||| |||||||||    
T  2297036 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttctt 2297089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 13405280 - 13405227
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||| |||| |||||||||||||||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttctt 13405227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 24680126 - 24680179
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 24680179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 37502321 - 37502370
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  37502321 ttcaaaatgaacgtcactttcagtttccaatgcaataataactttttctt 37502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 42880087 - 42880034
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||  |||| |||||||||||||||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttctt 42880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 10599212 - 10599264
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  10599212 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 10599264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 48684726 - 48684774
Alignment:
Q  191 tcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  48684726 tcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 48684774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 10476141 - 10476187
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  10476141 aaaatgaatgtcactttcactttccaatgcaataataactttttctt 10476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 27935765 - 27935815
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||||||||    
T  27935765 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 27935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 27947647 - 27947601
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  27947647 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 27947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 29636375 - 29636333
Alignment:
Q  191 tcaaaatgaatgtcactttaagtttctaatgcaataataactt 233  Q
    ||||||| ||||||||||| |||||||||||||||||||||||    
T  29636375 tcaaaataaatgtcactttcagtttctaatgcaataataactt 29636333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 31418667 - 31418613
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||| |||  |||||| |||||| ||||||||||||||||||||||    
T  31418667 tttgtttcaaaataaattccactttcagtttccaatgcaataataactttttctt 31418613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 34012159 - 34012209
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| |||||||||||||||||||||||| |||| | ||||||||||||    
T  34012159 ttgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttt 34012209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 6747225 - 6747274
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttt 235  Q
    |||||| |||| |||||||||||| |||||| ||||||||||||||||||    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataactttt 6747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 8603973 - 8604026
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||| |||||||| | |||| ||||||||||||||||||||||    
T  8603973 ttgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttctt 8604026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 33939887 - 33939834
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||||||||||||  ||||| |||| |||||||||||||||||    
T  33939887 ttgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctt 33939834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 37490782 - 37490835
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||| ||||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  37490782 ttgtatcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 37490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 41137726 - 41137779
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||| |||||||| |||||| |||||| ||||||||||||| ||||||||    
T  41137726 ttgtttcacaatgaatgccacttttagtttccaatgcaataataattttttctt 41137779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 42285906 - 42285959
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||| ||| |||||| ||||||||||||| ||||||||    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 42285959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 48843549 - 48843602
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttct 238  Q
    ||||||| ||||||||||||||||| |||||  ||||||||||||| |||||||    
T  48843549 tttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttct 48843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 44453141 - 44453181
Alignment:
Q  194 aaatgaatgtcactttaagtttctaatgcaataataacttt 234  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  44453141 aaatgaatgtcactttcagtttccaatgcaataataacttt 44453181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 16565253 - 16565214
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaat 225  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  16565253 ttgtttcaaaatgaatgtcattttcagtttctaatgcaat 16565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 16600409 - 16600448
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaat 225  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  16600409 ttgtttcaaaatgaatgtcattttcagtttctaatgcaat 16600448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 21752260 - 21752213
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttc 237  Q
    |||||||| ||||||| ||| |||||| ||||||||||||||||||||    
T  21752260 ttcaaaataaatgtcattttcagtttccaatgcaataataactttttc 21752213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 25440884 - 25440923
Alignment:
Q  200 atgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  25440884 atgtcactttcagtttccaatgcaataataactttttctt 25440923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 1031153 - 1031203
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||||||||||||||||||| || |||||| | |||||||||||| ||||    
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataacatttt 1031203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 42753705 - 42753751
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataac 231  Q
    ||||||||||||||||||||||||| | |||| ||| ||||||||||    
T  42753705 tttgtttcaaaatgaatgtcactttcaatttccaatacaataataac 42753751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 44567195 - 44567141
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||||||||||| | |||  ||||||||||||| ||||||||    
T  44567195 tttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttctt 44567141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 23935420 - 23935473
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||| ||||||  ||| |||||| ||||||||||||||||||||||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttctt 23935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 24133283 - 24133230
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||| |||| |||||||| |||||| ||||||||||||| ||||||||    
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttctt 24133230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 37815722 - 37815775
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||| |||| | |||| ||| ||||||||| ||||||||    
T  37815722 ttgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttctt 37815775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 45499980 - 45499927
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| ||||||| |||||| ||||| |||||||  |||||||    
T  45499980 ttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttctt 45499927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 40339457 - 40339505
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttt 234  Q
    |||||||||||||| ||||||||| | |||  |||||||||||||||||    
T  40339457 ttgtttcaaaatgactgtcactttcaattttcaatgcaataataacttt 40339505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 234032 - 234085
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  234032 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 4850650 - 4850597
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 4850597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 13504002 - 13503953
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 13503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 29399944 - 29399997
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  29399944 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 29399997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 32193699 - 32193753
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  32193699 tttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttctt 32193753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 18737245 - 18737192
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||| ||||||    
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttctt 18737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 19674982 - 19675031
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  19674982 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 19675031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 24163869 - 24163816
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  24163869 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 24163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 32429282 - 32429335
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||| |||||||||||| | |||| ||||||||||||||||||||||    
T  32429282 ttgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttctt 32429335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 12063665 - 12063615
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||| |||||    
T  12063665 ttgtttccaaatgaatgtcactttcagtttccaatgcaataataatttttt 12063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 12459469 - 12459420
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||  ||||||||| |||||||| |||||||||    
T  12459469 ttcaaaatgaatgtcactttcggtttctaatacaataatatctttttctt 12459420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 23259480 - 23259431
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttt 235  Q
    |||||||||||||||||||| ||| |||||| ||||||| ||||||||||    
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataactttt 23259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 29713557 - 29713508
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| |||  ||||| ||||||||||||||||||||||    
T  29713557 ttcaaaatgaatgtcattttccgtttccaatgcaataataactttttctt 29713508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 12323035 - 12322996
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataata 229  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  12323035 ttcaaaatgaatgtcactttcagtttccaatgcaataata 12322996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 10540663 - 10540613
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||| ||||||||||| | |||| |||||||||||||| ||||    
T  10540663 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataacctttt 10540613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 31443601 - 31443551
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||||||||| | ||| |||||| |||||||||||||||||||    
T  31443601 ttgtttaaaaatgaatgttattttcagtttccaatgcaataataacttttt 31443551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 9940646 - 9940695
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttt 235  Q
    |||||| ||||||| ||||||||| |||||  ||||||||||||||||||    
T  9940646 ttgttttaaaatgattgtcactttcagttttcaatgcaataataactttt 9940695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 17246761 - 17246732
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttc 216  Q
    ||||||||||||||||||||||||||||||    
T  17246761 tgtttcaaaatgaatgtcactttaagtttc 17246732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 12588531 - 12588579
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttcttct 241  Q
    ||||||||||| ||||| |||||  ||||||||||||||||||| ||||    
T  12588531 aaaatgaatgttactttcagtttgcaatgcaataataacttttttttct 12588579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 19600419 - 19600471
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttct 238  Q
    |||||||||||||||  |||||||||||||   |||||||||||| |||||||    
T  19600419 ttgtttcaaaatgaagatcactttaagttttctatgcaataataattttttct 19600471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 3025086 - 3025033
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  3025086 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 3025033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 7317026 - 7317079
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  7317026 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 7317079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 10345087 - 10345034
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  10345087 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 10345034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 42104218 - 42104165
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 42104165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 14620646 - 14620596
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  14620646 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 14620596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 21319466 - 21319412
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  21319466 tttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttctt 21319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 39566180 - 39566234
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  39566180 tttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39566234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 2729941 - 2729888
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  2729941 ttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttctt 2729888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 24280991 - 24281044
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 24381221 - 24381168
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 27797786 - 27797832
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  27797786 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 27797832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 6518974 - 6519027
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||| |||| |||||  ||||||||||||||||||||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttctt 6519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 15167164 - 15167115
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15167115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 25362955 - 25362902
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||| ||||| |||||| ||||||||||| ||||||||||    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttctt 25362902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 34209052 - 34208999
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttc---taatgcaataataacttttt 236  Q
    |||||||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  34209052 ttgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttt 34208999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 3306157 - 3306111
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  3306157 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 3306111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 7721094 - 7721144
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||| |||||||| ||||  |||||||||||||||||||    
T  7721094 ttgtttcaaaatgaatatcactttatgttttcaatgcaataataacttttt 7721144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 21195380 - 21195430
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||| ||||| |||||||||| ||||||||||||| ||||||||    
T  21195380 tttcaaaatgattgtcaatttaagtttccaatgcaataataattttttctt 21195430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 39504720 - 39504774
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaa-taataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttctt 39504774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 39729960 - 39730010
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||| | ||| |||||| ||||||||||||||||||||||    
T  39729960 tttcaaaatgaatgttattttcagtttccaatgcaataataactttttctt 39730010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 4911305 - 4911252
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| ||||||||||| |||||| |||| ||||||| |||||||||    
T  4911305 ttgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttctt 4911252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 13761555 - 13761608
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | |||  ||||||||||||| ||||||||    
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttctt 13761608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 26660753 - 26660806
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| | |||  ||||||||||||||||||||||    
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26660806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 26932346 - 26932399
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| | |||  ||||||||||||||||||||||    
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 35766051 - 35766002
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| |||||  ||| ||||||||||||||||||    
T  35766051 ttcaaaatgaatgtcactttcagttttcaatacaataataactttttctt 35766002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 36073785 - 36073732
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| |||||||||||| ||||| |||  ||||||||||||||||||||||    
T  36073785 ttgtttctaaatgaatgtcattttaaattttcaatgcaataataactttttctt 36073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 38362291 - 38362243
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttt 235  Q
    ||||||||||||||||||||||| | |||  ||||||||||||||||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttt 38362243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 14162049 - 14162003
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||| ||||||| |||| ||||||||||||||||||| ||||||||    
T  14162049 aaaataaatgtcattttaggtttctaatgcaataataattttttctt 14162003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 36164892 - 36164938
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||| ||| |||||| |||||| |||||||||||||||    
T  36164892 aaaatgaatgtcattttcagtttccaatgcagtaataactttttctt 36164938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 7580024 - 7579971
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||| ||||| |||||  ||| ||||||||||||||||||    
T  7580024 ttgttttaaaatgaatgttactttcagttttcaatacaataataactttttctt 7579971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 9066578 - 9066525
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||| ||||| |||||  |||||||||||||  |||||||    
T  9066578 ttgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttctt 9066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 11977590 - 11977639
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| |||||||||||| |||||| ||| | ||||||||||||||||    
T  11977590 ttcaaaacgaatgtcactttcagtttccaataccataataactttttctt 11977639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 29807465 - 29807417
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaata--ataactttttctt 239  Q
    ||||||||||| ||||| ||||||||||||||||  |||||||||||||    
T  29807465 aaaatgaatgttactttgagtttctaatgcaataatataactttttctt 29807417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 34446182 - 34446129
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| |||||  ||| |||||||||| |||||||    
T  34446182 ttgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttctt 34446129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 38369871 - 38369923
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||| ||||||| | |||| ||||||||||||||||||||||    
T  38369871 ttgttttaaaatgaatatcactttta-tttccaatgcaataataactttttctt 38369923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 4505335 - 4505388
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  4505335 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 4505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 19451370 - 19451317
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19451317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 51733653 - 51733600
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctt 51733600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 52957949 - 52957896
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  52957949 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 52957896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 1819560 - 1819613
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  1819560 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 1819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 10573313 - 10573260
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttctt 10573260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 19878646 - 19878699
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  19878646 ttgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19878699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 37624554 - 37624607
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  37624554 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 37624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 40345506 - 40345453
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 40345453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 52253843 - 52253896
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  52253843 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctt 52253896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 52915701 - 52915648
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  52915701 ttgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttctt 52915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 39982106 - 39982154
Alignment:
Q  191 tcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  39982106 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39982154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 29519684 - 29519634
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  29519684 ttgtttcaaaataaatgtcacttttagtttccaatgcaataataacttttt 29519634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 40837128 - 40837178
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt 40837178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 49080635 - 49080586
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  49080635 ttgtttcaaaatgaatgtcactttcagttt-taatgcaataataacttttt 49080586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 49089462 - 49089512
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataacttttt 49089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 2728553 - 2728504
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  2728553 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 2728504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 19930712 - 19930765
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | ||||  |||||||||||||||||||||    
T  19930712 ttgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttctt 19930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 20448037 - 20448090
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 20448090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 24157183 - 24157236
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| ||||||| ||| |||||||||||||||||||| ||||||||    
T  24157183 ttgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctt 24157236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 25231173 - 25231226
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  25231173 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 25231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 30261257 - 30261310
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| |||||||||||||  |||||||    
T  30261257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttctt 30261310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 50621341 - 50621293
Alignment:
Q  191 tcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  50621341 tcaaaataaatgtcactttaagttttcaatgcaataataactttttctt 50621293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 7906152 - 7906102
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||| ||||||   ||||||||||||||||||||    
T  7906152 tttcaaaatgaatgtcactttcagtttccggtgcaataataactttttctt 7906102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 21864535 - 21864489
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  21864535 aaaatgaatgttactttcagtttccaatgcaataataactttttctt 21864489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 21920396 - 21920350
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  21920396 aaaatgaatgttactttcagtttccaatgcaataataactttttctt 21920350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 24940876 - 24940930
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||| |||   |||| ||||||||||||||||||||||    
T  24940876 tttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttctt 24940930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 34413706 - 34413656
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||| ||||||||||| | |||| |||||||||||||||||||    
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataacttttt 34413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 44061005 - 44061059
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| | ||||||||||||||| | |||||||| ||||||||||||||||||    
T  44061005 tttgttttataatgaatgtcactttcattttctaatacaataataactttttctt 44061059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 45839643 - 45839685
Alignment:
Q  194 aaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||| |||||||||| |||||||||||||||    
T  45839643 aaatgaatgtcactttcagtttctaatacaataataacttttt 45839685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 2493100 - 2493153
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||| |||||||| | |||| ||||||||||||| ||||||||    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttctt 2493153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 44572024 - 44571971
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||||||| |||| |||||| |||||||||| |||||||||||    
T  44572024 ttgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttctt 44571971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 45043747 - 45043694
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  45043747 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 45043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 47817736 - 47817789
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| | ||||| |||||  ||||||||||||||||||||||    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttctt 47817789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 52848213 - 52848160
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| | |||| ||||||||||||| ||||||||    
T  52848213 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 52848160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 33033076 - 33033120
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataa 230  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||    
T  33033076 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataa 33033120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 620330 - 620287
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||    
T  620330 aaaatgaatatcagtttaagtttctaatgcaataataatttttt 620287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 27943705 - 27943658
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactt 233  Q
    |||||||||||||||||||||||| | |||  ||||||||||||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactt 27943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 27653674 - 27653724
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||| ||||||| ||| ||||||||||||||| ||||||||||    
T  27653674 ttgttttaaaataaatgtcatttttagtttctaatgcaatgataacttttt 27653724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 50203074 - 50203125
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||  | ||||||||||||||||||||||    
T  50203074 ttgttttaaaatgaatgtcactttcagt--ccaatgcaataataactttttctt 50203125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 53814656 - 53814606
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||| |||||||||||||||||| ||||   |||||||||||||||||||    
T  53814656 ttgttccaaaatgaatgtcacttttagttaacaatgcaataataacttttt 53814606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 22220518 - 22220465
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| ||||||| ||| | |||  ||||||||||||||||||||||    
T  22220518 ttgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttctt 22220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 41496203 - 41496256
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| ||| ||||||| |||||  ||| ||||||||||||||||||    
T  41496203 ttgtttcaaaataaatctcactttcagttttcaatacaataataactttttctt 41496256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 41920468 - 41920415
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||| ||||||| ||| |||||| || |||||||||||||||||||    
T  41920468 ttgttttaaaataaatgtcattttcagtttccaaagcaataataactttttctt 41920415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 54042342 - 54042289
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||||||||||||  ||||| |||| |||||||| ||||||||    
T  54042342 ttgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttctt 54042289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 28734596 - 28734640
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataa 230  Q
    |||||||| ||||||||||||||| |||||| | |||||||||||    
T  28734596 ttgtttcataatgaatgtcactttcagtttccattgcaataataa 28734640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 56460082 - 56460134
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||| ||||||||||||||||| || ||  ||||||||| ||||||||||||    
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctt 56460134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 19115385 - 19115438
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  19115385 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 19115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 38016373 - 38016426
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  38016373 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 38016426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 45213874 - 45213821
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  45213874 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttctt 45213821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 44676218 - 44676272
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  44676218 tttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttctt 44676272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 2458005 - 2458058
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctt 2458058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 3152958 - 3152905
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  3152958 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3152905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 30426476 - 30426423
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 30426423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 42571681 - 42571628
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||||||    
T  42571681 ttgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttctt 42571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 42886749 - 42886802
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  42886749 ttgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttctt 42886802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 47895496 - 47895443
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 47895443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 48901718 - 48901771
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48901771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 48903284 - 48903337
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48903337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 50646262 - 50646209
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  50646262 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 50646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 7231047 - 7230995
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttctt 7230995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 30315307 - 30315360
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||  ||||| ||||||| ||||||||||||||    
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttctt 30315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 32492333 - 32492280
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| | |||  ||||||||||||||||||||||    
T  32492333 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 32492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 38140949 - 38140998
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacctttt 38140998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 41850388 - 41850441
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||||| |||||| |||||| ||||||||||||||||||||||    
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttctt 41850441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 50038323 - 50038270
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  50038323 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 50038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 53200832 - 53200779
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  53200832 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 53200779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 36460805 - 36460857
Alignment:
Q  187 tgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 36460857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 36729957 - 36729909
Alignment:
Q  191 tcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  36729957 tcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 36729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 11393542 - 11393596
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||||||| ||| | |||| ||||||||||||||||||||||    
T  11393542 tttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttctt 11393596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 23208441 - 23208390
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| |||||| ||  ||||||||||||||||||    
T  23208441 ttgtttcaaaatgaatgtcactttcagtttccaa--caataataactttttctt 23208390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 30431121 - 30431171
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  30431121 tttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 30431171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 33194183 - 33194133
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||||||||||||||| |||||| |||||||| ||||||||||    
T  33194183 ttgttttaaaatgaatgtcactttcagtttccaatgcaatgataacttttt 33194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 40487829 - 40487879
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||   |||| ||||||||||||||||||||||    
T  40487829 tttcaaaatgaatgtcacttttgatttccaatgcaataataactttttctt 40487879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 4392194 - 4392247
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||| ||| |||||| |||  |||||||||||||||||    
T  4392194 ttgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttctt 4392247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 4758989 - 4759042
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||| ||||||||||| | |||| ||||||||||||||||||||||    
T  4758989 ttgttttaaaataaatgtcactttcactttccaatgcaataataactttttctt 4759042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 42071983 - 42072036
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||| |||||| ||| |||||| ||||||||||||||||||||||    
T  42071983 ttgttttaaaatggatgtcatttttagtttccaatgcaataataactttttctt 42072036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 50088468 - 50088415
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| |||||||| |||||||| |||||| ||||||||| ||||||||||||    
T  50088468 ttgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttctt 50088415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 51398008 - 51398061
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| ||||||||||| |||||  |||| |||||||||||||||||    
T  51398008 ttgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttctt 51398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 38363785 - 38363833
Alignment:
Q  188 gtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||||||||||||||||||| |||||  |||||||||||||| ||||    
T  38363785 gtttcaaaatgaatgtcactttcagtttacaatgcaataataacctttt 38363833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 9189580 - 9189534
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||||    
T  9189580 aaaatgaatgtcactttcagttttcaatgaaataataactttttctt 9189534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 33024445 - 33024399
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||| ||||| |||||| ||||||||||||||||| ||||    
T  33024445 aaaatgaatgttactttcagtttccaatgcaataataactttatctt 33024399  T

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Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 47137961 - 47138011
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataacttttt 236  Q
    |||||| ||||||||||||| ||| |||||  |||||||||||||||||||    
T  47137961 ttgttttaaaatgaatgtcatttttagttttcaatgcaataataacttttt 47138011  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 31853714 - 31853661
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||| ||||||||||| |||||| | | ||||||||| ||||||||    
T  31853714 ttgtttcaaaataaatgtcacttttagtttccagtacaataataattttttctt 31853661  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 36844894 - 36844841
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||  ||||||||||| |||||  ||||||||||||| ||||||||    
T  36844894 ttgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttctt 36844841  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 39356883 - 39356936
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||| ||||||||||| |||||  |||||||||||||| |||||||    
T  39356883 ttgttttaaaataaatgtcactttcagttttcaatgcaataataacattttctt 39356936  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 47823603 - 47823550
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||| ||||||| ||| ||||| |||||||||||||| ||||||||    
T  47823603 ttgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctt 47823550  T

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Target: scaffold0332 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 3966 - 3912
Alignment:
Q  185 tttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  3966 tttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3912  T

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Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 3656 - 3606
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  3656 tttcaaaatgaatgtcactttcagtttccaatacaataataactttttctt 3606  T

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Target: scaffold0565 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 9796 - 9743
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||| ||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  9796 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 9743  T

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Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 18405 - 18356
Alignment:
Q  190 ttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||    
T  18405 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 18356  T

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Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 62631 - 62684
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||||||||||||||||||| ||||||  ||| |||||||||||||||||    
T  62631 ttgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctt 62684  T

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Target: scaffold2107 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 661 - 615
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  661 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 615  T

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Target: scaffold0300 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 4566 - 4616
Alignment:
Q  189 tttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||||||| | ||| |||||||||||||| ||||||||    
T  4566 tttcaaaatgaatgtcacttttaatttttaatgcaataataattttttctt 4616  T

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Target: scaffold0502 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 719 - 673
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||    
T  719 aaaatgaatgtcacttacaatttccaatgcaataataactttttctt 673  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 21229 - 21183
Alignment:
Q  193 aaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||    
T  21229 aaaatgactgtcactttcagtttcaaatgcaataataattttttctt 21183  T

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Target: scaffold0983 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 841 - 788
Alignment:
Q  186 ttgtttcaaaatgaatgtcactttaagtttctaatgcaataataactttttctt 239  Q
    |||||||| ||||||||||||||| |||||| | || |||||||| ||||||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttctt 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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