View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16696_low_4 (Length: 473)

Name: NF16696_low_4
Description: NF16696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16696_low_4
NF16696_low_4
[»] chr4 (59 HSPs)
chr4 (1-465)||(26187741-26188205)
chr4 (257-381)||(55073787-55073912)
chr4 (210-465)||(43477301-43477548)
chr4 (307-382)||(15225805-15225880)
chr4 (400-449)||(15805093-15805142)
chr4 (307-371)||(26034839-26034903)
chr4 (398-445)||(6943378-6943425)
chr4 (307-382)||(14898995-14899070)
chr4 (307-378)||(34561068-34561139)
chr4 (308-382)||(12488438-12488512)
chr4 (323-389)||(47575295-47575361)
chr4 (307-384)||(13521364-13521441)
chr4 (307-371)||(3997441-3997505)
chr4 (307-371)||(7902490-7902554)
chr4 (307-371)||(9185063-9185127)
chr4 (307-371)||(9190928-9190992)
chr4 (2-144)||(3992689-3992836)
chr4 (307-382)||(14868447-14868522)
chr4 (307-382)||(14877412-14877487)
chr4 (324-382)||(14953451-14953509)
chr4 (323-389)||(31297890-31297956)
chr4 (326-376)||(32545529-32545579)
chr4 (219-299)||(13521301-13521382)
chr4 (308-381)||(15011196-15011269)
chr4 (219-299)||(41817492-41817573)
chr4 (251-299)||(7902460-7902508)
chr4 (398-445)||(13065254-13065301)
chr4 (398-461)||(30054513-30054576)
chr4 (398-445)||(39216536-39216583)
chr4 (325-384)||(52742621-52742680)
chr4 (308-382)||(10713580-10713654)
chr4 (308-382)||(10927350-10927424)
chr4 (324-382)||(25690634-25690692)
chr4 (399-433)||(33462814-33462848)
chr4 (39-144)||(41817816-41817922)
chr4 (219-299)||(34561121-34561202)
chr4 (215-267)||(9185006-9185058)
chr4 (329-369)||(15539572-15539612)
chr4 (214-289)||(52742535-52742611)
chr4 (299-365)||(1150729-1150796)
chr4 (398-437)||(12875024-12875063)
chr4 (398-433)||(42758305-42758340)
chr4 (2-100)||(7899874-7899971)
chr4 (399-433)||(8029792-8029826)
chr4 (399-433)||(31269636-31269670)
chr4 (219-288)||(31297810-31297880)
chr4 (399-433)||(33468453-33468487)
chr4 (399-433)||(37259314-37259348)
chr4 (325-371)||(39320213-39320259)
chr4 (39-112)||(34561471-34561544)
chr4 (398-461)||(42316078-42316140)
chr4 (219-294)||(47575363-47575440)
chr4 (398-442)||(2820407-2820451)
chr4 (299-350)||(3309918-3309970)
chr4 (307-371)||(8660782-8660846)
chr4 (215-267)||(9190871-9190923)
chr4 (219-267)||(15225885-15225933)
chr4 (405-461)||(23093696-23093752)
chr4 (307-355)||(41817462-41817510)
[»] chr7 (67 HSPs)
chr7 (220-447)||(10532128-10532354)
chr7 (220-449)||(13343724-13343955)
chr7 (299-461)||(9008716-9008881)
chr7 (323-449)||(10499499-10499627)
chr7 (323-449)||(10504528-10504656)
chr7 (398-461)||(10392545-10392608)
chr7 (398-445)||(26286594-26286641)
chr7 (307-371)||(8954646-8954710)
chr7 (398-445)||(3285098-3285145)
chr7 (398-445)||(10387807-10387854)
chr7 (307-378)||(27256881-27256952)
chr7 (307-365)||(845987-846045)
chr7 (307-365)||(853364-853422)
chr7 (307-365)||(1211368-1211426)
chr7 (307-389)||(8076683-8076765)
chr7 (299-364)||(15566033-15566099)
chr7 (308-382)||(18426567-18426641)
chr7 (307-384)||(9650339-9650416)
chr7 (307-371)||(838811-838875)
chr7 (307-371)||(1203991-1204055)
chr7 (299-362)||(11297413-11297477)
chr7 (307-371)||(19096906-19096970)
chr7 (325-384)||(2629294-2629353)
chr7 (251-317)||(7838761-7838828)
chr7 (2-144)||(27257246-27257393)
chr7 (308-371)||(45169311-45169374)
chr7 (251-310)||(47552628-47552687)
chr7 (307-361)||(1043880-1043934)
chr7 (219-285)||(11017399-11017465)
chr7 (308-382)||(14259646-14259720)
chr7 (308-382)||(20488588-20488662)
chr7 (219-299)||(9650276-9650357)
chr7 (272-356)||(13337388-13337470)
chr7 (307-364)||(19640957-19641014)
chr7 (219-299)||(27256934-27257015)
chr7 (323-371)||(36477621-36477669)
chr7 (307-371)||(40864742-40864806)
chr7 (398-445)||(3046168-3046215)
chr7 (323-382)||(20485227-20485286)
chr7 (398-445)||(21671792-21671839)
chr7 (399-433)||(8268907-8268941)
chr7 (219-288)||(10488613-10488683)
chr7 (323-365)||(11017476-11017518)
chr7 (308-382)||(16459761-16459835)
chr7 (307-365)||(18385145-18385203)
chr7 (272-356)||(13345293-13345375)
chr7 (404-449)||(15973347-15973392)
chr7 (335-371)||(29727211-29727247)
chr7 (225-299)||(15565611-15565686)
chr7 (250-288)||(1043927-1043965)
chr7 (399-433)||(4930833-4930867)
chr7 (219-299)||(8076747-8076829)
chr7 (220-286)||(10499415-10499481)
chr7 (220-286)||(10504444-10504510)
chr7 (254-288)||(11297461-11297495)
chr7 (308-382)||(14928016-14928090)
chr7 (308-382)||(15351482-15351556)
chr7 (399-433)||(27238762-27238796)
chr7 (222-299)||(40864682-40864760)
chr7 (399-433)||(42626038-42626072)
chr7 (395-428)||(6590469-6590502)
chr7 (323-356)||(13337984-13338017)
chr7 (219-288)||(14927953-14928022)
chr7 (219-288)||(15351419-15351488)
chr7 (219-288)||(29727117-29727186)
chr7 (401-433)||(4580113-4580145)
chr7 (421-461)||(13343994-13344034)
[»] chr3 (73 HSPs)
chr3 (219-449)||(35456234-35456462)
chr3 (251-363)||(47540841-47540954)
chr3 (219-382)||(11997301-11997460)
chr3 (251-349)||(47541257-47541356)
chr3 (307-389)||(8070312-8070394)
chr3 (402-466)||(11399939-11400003)
chr3 (299-381)||(6595763-6595846)
chr3 (307-389)||(3034276-3034358)
chr3 (307-389)||(3673219-3673301)
chr3 (307-389)||(3693251-3693333)
chr3 (307-389)||(8888563-8888645)
chr3 (299-363)||(16023191-16023256)
chr3 (405-449)||(28125701-28125745)
chr3 (308-382)||(9706971-9707045)
chr3 (299-388)||(12899113-12899203)
chr3 (308-382)||(16749300-16749374)
chr3 (308-382)||(19776525-19776599)
chr3 (263-361)||(47540466-47540562)
chr3 (307-364)||(8197110-8197167)
chr3 (307-364)||(8223593-8223650)
chr3 (2-112)||(8888978-8889090)
chr3 (307-371)||(10585569-10585633)
chr3 (209-299)||(3673283-3673374)
chr3 (209-299)||(3693315-3693406)
chr3 (398-465)||(10708153-10708220)
chr3 (308-371)||(37438940-37439003)
chr3 (307-389)||(8883803-8883885)
chr3 (307-364)||(29886-29943)
chr3 (219-299)||(3034340-3034421)
chr3 (219-288)||(6595710-6595779)
chr3 (219-299)||(8070376-8070457)
chr3 (219-299)||(8883867-8883948)
chr3 (219-299)||(8888627-8888708)
chr3 (254-361)||(18012001-18012110)
chr3 (307-364)||(18350154-18350211)
chr3 (308-369)||(49020106-49020167)
chr3 (307-371)||(14425222-14425286)
chr3 (308-371)||(8488771-8488834)
chr3 (398-449)||(17025554-17025605)
chr3 (313-364)||(51922992-51923043)
chr3 (324-370)||(4106722-4106768)
chr3 (324-370)||(4110574-4110620)
chr3 (2-112)||(8070741-8070850)
chr3 (2-112)||(10585102-10585211)
chr3 (324-370)||(15965707-15965753)
chr3 (324-370)||(15969631-15969677)
chr3 (324-370)||(15973555-15973601)
chr3 (308-382)||(22758560-22758634)
chr3 (2-112)||(3673628-3673739)
chr3 (2-112)||(3693682-3693793)
chr3 (2-112)||(8884232-8884344)
chr3 (251-299)||(10585539-10585587)
chr3 (307-371)||(45903924-45903988)
chr3 (398-433)||(12965336-12965371)
chr3 (219-270)||(14425169-14425220)
chr3 (214-284)||(53502447-53502518)
chr3 (399-433)||(7570666-7570700)
chr3 (399-433)||(23660914-23660948)
chr3 (399-433)||(23665573-23665607)
chr3 (399-433)||(24037821-24037855)
chr3 (403-449)||(25726231-25726277)
chr3 (399-433)||(46964623-46964657)
chr3 (399-433)||(55326389-55326423)
chr3 (2-112)||(3034706-3034817)
chr3 (251-288)||(12899092-12899129)
chr3 (251-288)||(16023240-16023277)
chr3 (323-376)||(19340119-19340172)
chr3 (394-447)||(32746243-32746296)
chr3 (219-299)||(45903861-45903942)
chr3 (333-389)||(429062-429118)
chr3 (401-433)||(3419600-3419632)
chr3 (400-428)||(12112118-12112146)
chr3 (323-371)||(53358757-53358805)
[»] scaffold0008 (1 HSPs)
scaffold0008 (219-441)||(256391-256612)
[»] chr6 (40 HSPs)
chr6 (220-456)||(15990990-15991225)
chr6 (220-371)||(2759671-2759819)
chr6 (251-369)||(9751106-9751225)
chr6 (307-382)||(16625056-16625131)
chr6 (395-445)||(19994844-19994894)
chr6 (299-389)||(2862842-2862933)
chr6 (308-382)||(31477084-31477158)
chr6 (220-288)||(2759484-2759552)
chr6 (307-371)||(27073636-27073700)
chr6 (398-461)||(17599950-17600013)
chr6 (398-461)||(17914168-17914231)
chr6 (326-389)||(24588576-24588639)
chr6 (308-382)||(15704291-15704365)
chr6 (306-382)||(6112137-6112213)
chr6 (311-371)||(26981246-26981306)
chr6 (210-285)||(28964130-28964206)
chr6 (402-449)||(2759865-2759912)
chr6 (253-288)||(2882126-2882161)
chr6 (308-382)||(16761022-16761097)
chr6 (323-382)||(19772407-19772466)
chr6 (308-371)||(27324441-27324504)
chr6 (254-288)||(2862824-2862858)
chr6 (324-382)||(22949872-22949930)
chr6 (324-382)||(22953828-22953886)
chr6 (324-382)||(23872316-23872374)
chr6 (324-382)||(23876272-23876330)
chr6 (399-445)||(12405812-12405855)
chr6 (307-371)||(18387583-18387647)
chr6 (299-389)||(2882145-2882236)
chr6 (323-370)||(14073787-14073834)
chr6 (308-363)||(14322790-14322845)
chr6 (399-434)||(16835608-16835643)
chr6 (399-433)||(11428571-11428605)
chr6 (399-433)||(14509584-14509618)
chr6 (308-382)||(22806991-22807065)
chr6 (394-431)||(13657511-13657548)
chr6 (75-144)||(15645702-15645771)
chr6 (251-299)||(6112108-6112156)
chr6 (323-371)||(15640961-15641009)
chr6 (219-267)||(16625136-16625184)
[»] scaffold0009 (2 HSPs)
scaffold0009 (231-382)||(71772-71920)
scaffold0009 (398-445)||(147841-147888)
[»] chr2 (45 HSPs)
chr2 (307-433)||(17452965-17453098)
chr2 (299-379)||(22845045-22845126)
chr2 (299-382)||(25375529-25375613)
chr2 (225-361)||(30635457-30635590)
chr2 (219-288)||(22845110-22845179)
chr2 (307-371)||(6856848-6856912)
chr2 (308-382)||(1284154-1284228)
chr2 (307-364)||(26897285-26897342)
chr2 (307-364)||(34070077-34070134)
chr2 (299-362)||(30641481-30641545)
chr2 (398-461)||(19578029-19578092)
chr2 (307-381)||(377669-377743)
chr2 (323-389)||(10160115-10160181)
chr2 (309-371)||(17327711-17327773)
chr2 (324-382)||(30344312-30344370)
chr2 (395-461)||(40847037-40847103)
chr2 (219-288)||(7559667-7559736)
chr2 (307-364)||(24292841-24292898)
chr2 (39-112)||(28856150-28856223)
chr2 (323-384)||(30658815-30658876)
chr2 (220-288)||(17452904-17452972)
chr2 (251-299)||(30641460-30641508)
chr2 (210-288)||(28855838-28855917)
chr2 (307-350)||(30629531-30629574)
chr2 (2-112)||(6296832-6296942)
chr2 (2-112)||(10159639-10159749)
chr2 (308-382)||(23068133-23068207)
chr2 (334-371)||(7559757-7559794)
chr2 (220-299)||(10160036-10160117)
chr2 (307-364)||(24286273-24286330)
chr2 (219-288)||(25375597-25375666)
chr2 (252-319)||(19589052-19589120)
chr2 (332-363)||(3238840-3238871)
chr2 (308-371)||(9785799-9785862)
chr2 (307-389)||(13290942-13291025)
chr2 (398-433)||(30651525-30651560)
chr2 (399-433)||(1934443-1934477)
chr2 (210-299)||(6297200-6297290)
chr2 (399-433)||(9184867-9184901)
chr2 (82-144)||(17452512-17452573)
chr2 (399-433)||(31327364-31327398)
chr2 (307-364)||(42248885-42248942)
chr2 (295-350)||(30619543-30619599)
chr2 (334-370)||(38426927-38426962)
chr2 (394-434)||(38591822-38591862)
[»] chr1 (49 HSPs)
chr1 (299-371)||(1067132-1067205)
chr1 (307-387)||(14804139-14804219)
chr1 (299-365)||(13893973-13894040)
chr1 (398-461)||(16036202-16036265)
chr1 (307-389)||(40232767-40232849)
chr1 (299-371)||(17213814-17213887)
chr1 (307-371)||(14819623-14819687)
chr1 (307-371)||(22428575-22428639)
chr1 (398-449)||(12260586-12260637)
chr1 (307-389)||(3094722-3094804)
chr1 (308-382)||(39243403-39243477)
chr1 (308-382)||(39246958-39247032)
chr1 (307-389)||(41097337-41097419)
chr1 (308-382)||(41387355-41387429)
chr1 (307-364)||(52100601-52100658)
chr1 (299-363)||(23285210-23285274)
chr1 (397-456)||(8138215-8138274)
chr1 (398-441)||(20107953-20107996)
chr1 (324-382)||(1924450-1924508)
chr1 (324-382)||(20923464-20923522)
chr1 (219-299)||(3094786-3094867)
chr1 (307-364)||(21498309-21498366)
chr1 (219-299)||(19725223-19725303)
chr1 (398-433)||(7882597-7882632)
chr1 (325-360)||(39037047-39037082)
chr1 (309-391)||(23254568-23254650)
chr1 (219-288)||(19727073-19727142)
chr1 (307-371)||(2367694-2367758)
chr1 (220-288)||(16836612-16836680)
chr1 (307-371)||(26199009-26199073)
chr1 (299-382)||(27308258-27308342)
chr1 (251-299)||(40232737-40232785)
chr1 (251-299)||(41097307-41097355)
chr1 (231-286)||(1067191-1067246)
chr1 (219-270)||(26199075-26199126)
chr1 (323-365)||(8267247-8267289)
chr1 (399-433)||(16834086-16834120)
chr1 (340-382)||(16836698-16836740)
chr1 (399-433)||(23192276-23192310)
chr1 (399-433)||(25844366-25844400)
chr1 (39-140)||(33055812-33055918)
chr1 (399-433)||(38621319-38621353)
chr1 (251-288)||(13894024-13894061)
chr1 (225-285)||(27308210-27308271)
chr1 (39-111)||(40232345-40232418)
chr1 (307-371)||(2384625-2384689)
chr1 (252-288)||(8267202-8267238)
chr1 (399-431)||(19798450-19798482)
chr1 (399-431)||(40166577-40166609)
[»] chr8 (54 HSPs)
chr8 (230-429)||(42972707-42972905)
chr8 (398-456)||(7002238-7002296)
chr8 (307-389)||(31449244-31449326)
chr8 (307-384)||(4237720-4237797)
chr8 (307-384)||(4242459-4242536)
chr8 (299-362)||(17153198-17153262)
chr8 (307-371)||(19393110-19393174)
chr8 (307-389)||(8330742-8330824)
chr8 (307-364)||(4582675-4582732)
chr8 (307-384)||(43302063-43302140)
chr8 (307-371)||(16066596-16066660)
chr8 (307-371)||(22104326-22104390)
chr8 (307-362)||(17157431-17157486)
chr8 (219-288)||(10933948-10934018)
chr8 (324-382)||(18861966-18862024)
chr8 (308-382)||(21411663-21411737)
chr8 (308-382)||(21806155-21806229)
chr8 (219-299)||(4237657-4237738)
chr8 (219-299)||(4242396-4242477)
chr8 (39-112)||(8330335-8330408)
chr8 (308-381)||(21384385-21384458)
chr8 (308-381)||(21387805-21387878)
chr8 (402-447)||(24672779-24672824)
chr8 (2-112)||(31448785-31448897)
chr8 (405-445)||(2966228-2966268)
chr8 (307-371)||(14036106-14036170)
chr8 (323-371)||(37772358-37772406)
chr8 (398-433)||(17953422-17953457)
chr8 (398-461)||(23548066-23548129)
chr8 (324-382)||(21827335-21827393)
chr8 (307-365)||(25367365-25367423)
chr8 (399-445)||(26779714-26779760)
chr8 (307-365)||(34818085-34818143)
chr8 (2-112)||(4237262-4237373)
chr8 (2-112)||(4242001-4242112)
chr8 (416-461)||(28863964-28864009)
chr8 (219-299)||(31449181-31449262)
chr8 (219-270)||(22104392-22104443)
chr8 (398-449)||(22714444-22714494)
chr8 (210-288)||(25367293-25367372)
chr8 (399-433)||(15951002-15951036)
chr8 (399-433)||(33417142-33417176)
chr8 (399-433)||(38181692-38181726)
chr8 (399-433)||(40125345-40125379)
chr8 (219-299)||(43302002-43302081)
chr8 (219-299)||(8330679-8330760)
chr8 (251-288)||(17153246-17153283)
chr8 (219-299)||(34818022-34818103)
chr8 (299-358)||(10933904-10933964)
chr8 (329-365)||(15197295-15197331)
chr8 (398-430)||(17794090-17794122)
chr8 (219-267)||(19393057-19393105)
chr8 (39-111)||(25361679-25361750)
chr8 (68-112)||(37772780-37772824)
[»] scaffold0182 (3 HSPs)
scaffold0182 (307-389)||(9259-9341)
scaffold0182 (2-112)||(8802-8914)
scaffold0182 (251-299)||(9229-9277)
[»] scaffold0357 (1 HSPs)
scaffold0357 (307-371)||(3726-3790)
[»] scaffold0327 (1 HSPs)
scaffold0327 (307-371)||(19601-19665)
[»] chr5 (58 HSPs)
chr5 (299-382)||(3666553-3666637)
chr5 (347-456)||(1429584-1429697)
chr5 (394-461)||(16115678-16115745)
chr5 (307-389)||(36936890-36936972)
chr5 (307-389)||(36941644-36941726)
chr5 (307-389)||(41997297-41997379)
chr5 (307-389)||(42002066-42002148)
chr5 (299-382)||(36949425-36949509)
chr5 (2-144)||(13300406-13300553)
chr5 (323-389)||(557329-557395)
chr5 (308-382)||(10754090-10754164)
chr5 (307-389)||(13300869-13300951)
chr5 (307-389)||(23976966-23977048)
chr5 (307-389)||(32460923-32461005)
chr5 (395-448)||(2859941-2859994)
chr5 (307-371)||(21826874-21826938)
chr5 (307-371)||(26869693-26869757)
chr5 (307-371)||(31732188-31732252)
chr5 (2-144)||(21322957-21323104)
chr5 (398-461)||(23757264-23757327)
chr5 (398-461)||(23822720-23822783)
chr5 (323-389)||(562101-562167)
chr5 (2-112)||(562530-562639)
chr5 (219-299)||(36936827-36936908)
chr5 (219-299)||(36941581-36941662)
chr5 (219-288)||(36949493-36949562)
chr5 (323-371)||(15395235-15395283)
chr5 (323-371)||(21323371-21323419)
chr5 (401-448)||(2848104-2848151)
chr5 (398-448)||(15414346-15414394)
chr5 (222-299)||(32460863-32460941)
chr5 (2-112)||(557758-557869)
chr5 (334-371)||(8770894-8770931)
chr5 (2-100)||(12044052-12044152)
chr5 (307-364)||(41099188-41099245)
chr5 (219-299)||(41997361-41997442)
chr5 (219-299)||(42002130-42002211)
chr5 (307-371)||(12044509-12044573)
chr5 (251-299)||(31732234-31732282)
chr5 (3-112)||(32460466-32460577)
chr5 (219-270)||(21826940-21826991)
chr5 (252-299)||(23976937-23976984)
chr5 (219-270)||(26869640-26869691)
chr5 (341-376)||(27425136-27425171)
chr5 (398-433)||(39519006-39519041)
chr5 (254-288)||(3666621-3666655)
chr5 (399-433)||(4872512-4872546)
chr5 (222-288)||(24435503-24435569)
chr5 (2-97)||(41997719-41997816)
chr5 (2-109)||(42002498-42002607)
chr5 (219-283)||(557408-557473)
chr5 (219-283)||(562180-562245)
chr5 (223-288)||(1429496-1429561)
chr5 (219-288)||(8770952-8771021)
chr5 (309-382)||(24435564-24435637)
chr5 (39-112)||(31732615-31732687)
chr5 (2-112)||(36941185-36941296)
chr5 (68-112)||(23976422-23976466)
[»] scaffold0132 (2 HSPs)
scaffold0132 (307-371)||(24675-24739)
scaffold0132 (219-267)||(24622-24670)
[»] scaffold0061 (3 HSPs)
scaffold0061 (307-371)||(49363-49427)
scaffold0061 (19-94)||(48895-48970)
scaffold0061 (251-299)||(49333-49381)
[»] scaffold0019 (1 HSPs)
scaffold0019 (307-371)||(30335-30399)
[»] scaffold0017 (3 HSPs)
scaffold0017 (307-371)||(149207-149271)
scaffold0017 (19-94)||(149664-149739)
scaffold0017 (251-299)||(149253-149301)
[»] scaffold0572 (1 HSPs)
scaffold0572 (308-382)||(10356-10430)
[»] scaffold0229 (1 HSPs)
scaffold0229 (308-382)||(10806-10880)
[»] scaffold0205 (1 HSPs)
scaffold0205 (307-389)||(30900-30982)
[»] scaffold0157 (1 HSPs)
scaffold0157 (308-382)||(31965-32039)
[»] scaffold0144 (1 HSPs)
scaffold0144 (308-382)||(7517-7591)
[»] scaffold0141 (1 HSPs)
scaffold0141 (308-382)||(13392-13466)
[»] scaffold0124 (1 HSPs)
scaffold0124 (308-382)||(21366-21440)
[»] scaffold0070 (6 HSPs)
scaffold0070 (307-389)||(59059-59141)
scaffold0070 (307-365)||(63285-63343)
scaffold0070 (210-288)||(59134-59213)
scaffold0070 (210-288)||(63336-63415)
scaffold0070 (2-112)||(59472-59581)
scaffold0070 (2-112)||(63674-63783)
[»] scaffold0034 (1 HSPs)
scaffold0034 (308-382)||(121206-121280)
[»] scaffold0015 (2 HSPs)
scaffold0015 (307-364)||(193646-193703)
scaffold0015 (307-361)||(187961-188014)
[»] scaffold1910 (1 HSPs)
scaffold1910 (307-371)||(517-581)
[»] scaffold0932 (1 HSPs)
scaffold0932 (309-389)||(1020-1100)
[»] scaffold0720 (2 HSPs)
scaffold0720 (299-362)||(5921-5985)
scaffold0720 (251-288)||(5900-5937)
[»] scaffold0478 (3 HSPs)
scaffold0478 (299-362)||(8247-8311)
scaffold0478 (251-288)||(8295-8332)
scaffold0478 (254-288)||(2917-2951)
[»] scaffold0060 (5 HSPs)
scaffold0060 (307-371)||(47352-47416)
scaffold0060 (307-371)||(52296-52360)
scaffold0060 (251-299)||(47322-47370)
scaffold0060 (251-299)||(52266-52314)
scaffold0060 (2-144)||(51832-51979)
[»] scaffold0452 (1 HSPs)
scaffold0452 (308-382)||(12348-12422)
[»] scaffold0431 (1 HSPs)
scaffold0431 (308-382)||(14857-14931)
[»] scaffold0415 (1 HSPs)
scaffold0415 (324-382)||(1128-1186)
[»] scaffold0240 (1 HSPs)
scaffold0240 (395-461)||(4555-4620)
[»] scaffold0020 (1 HSPs)
scaffold0020 (210-299)||(547-637)
[»] scaffold0044 (2 HSPs)
scaffold0044 (308-364)||(64818-64874)
scaffold0044 (308-364)||(81216-81272)
[»] scaffold0690 (1 HSPs)
scaffold0690 (398-461)||(5811-5874)
[»] scaffold0011 (3 HSPs)
scaffold0011 (323-382)||(127043-127102)
scaffold0011 (398-433)||(145871-145906)
scaffold0011 (219-288)||(127111-127180)
[»] scaffold0628 (1 HSPs)
scaffold0628 (308-382)||(7028-7102)
[»] scaffold0031 (1 HSPs)
scaffold0031 (308-382)||(35391-35465)
[»] scaffold0018 (1 HSPs)
scaffold0018 (308-382)||(21947-22021)
[»] scaffold0484 (1 HSPs)
scaffold0484 (39-111)||(7980-8051)
[»] scaffold0041 (3 HSPs)
scaffold0041 (219-298)||(35020-35100)
scaffold0041 (307-371)||(35083-35147)
scaffold0041 (2-144)||(34641-34788)
[»] scaffold0004 (1 HSPs)
scaffold0004 (307-371)||(199841-199905)
[»] scaffold0292 (1 HSPs)
scaffold0292 (323-382)||(7807-7866)
[»] scaffold0002 (1 HSPs)
scaffold0002 (399-433)||(4675-4709)
[»] scaffold0575 (1 HSPs)
scaffold0575 (323-380)||(5276-5333)


Alignment Details
Target: chr4 (Bit Score: 425; Significance: 0; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 1 - 465
Target Start/End: Original strand, 26187741 - 26188205
Alignment:
Q  1 tacacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtg 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  26187741 tacacaaattctcacgtagggaagaattagtgttgtcagaattgaaaaatgtgaaattcccacatgagatggatcacacactagtagtatttatatagtg 26187840  T
Q  101 aggttgtacctcaaatgggatgcataattaagtgaacgaagtaaacacgaaaatgttaaattaagtaattaattgaatcatattatttgaaagtgtcatc 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26187841 gggttgtacctcaaatgggatgcataattaagtgaacgaagtaagcacgaaaatgttaaattaagtaattaattgaatcatattatttgaaagtgtcatc 26187940  T
Q  201 ttagtctctatatctttcgtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagta 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26187941 ttagtctctatatctttcgtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattatttactccaaaagta 26188040  T
Q  301 atatgtaattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacacaagggttatat 400  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  26188041 atatgtaattacttgttcctaaagtttctcacatattagttgtgaattaactatataaatagagaactcacgtagtgcattccagacacaagggttatat 26188140  T
Q  401 tgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26188141 tgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctc 26188205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 381
Target Start/End: Complemental strand, 55073912 - 55073787
Alignment:
Q  257 tttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctcta 355  Q
    |||||| |||||||||||||||| ||||  ||| ||| ||| |||||||| |||| |||||| ||| |||||| || |||||||||||||||||||||||    
T  55073912 tttttaaactagatctaatatgttaattgattattcccaaactaatatgtgaattgcttgtttctaaagtttcacatatattagttgtgaattttctcta 55073813  T
Q  356 taaatagagaactcacgtagtgcatt 381  Q
    |||||||||| |||||||||| ||||    
T  55073812 taaatagagatctcacgtagttcatt 55073787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 210 - 465
Target Start/End: Original strand, 43477301 - 43477548
Alignment:
Q  210 atatctttcgtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaat-atgtaa 308  Q
    |||| ||| |||||||||||  ||||| |||| | || || ||||||||||| ||||||||||||| |  |||||||||| | | |||||||| |||||     
T  43477301 atatattttgtactcaatatagtatattttggtattcaattgagatatttttgtactagatctaatgttagaattacttaattctaaagtaatgatgta- 43477399  T
Q  309 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagtt 406  Q
    ||||  ||| | | ||||| |||| ||||| |||||||||||||||||||||||| ||||||  ||||||||| || ||||  ||| ||| |||||||||    
T  43477400 ttac--gtttccaaagtttatcacttattaattgtgaattttctctataaatagataactca--tagtgcatttcacacaccaaagagttctattgagtt 43477495  T
Q  407 gtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctc 465  Q
    ||| || ||||||||||||||| ||      |||||||||||| |||||| ||||||||    
T  43477496 gtcaagtactctttctctcttcccc------cttgtgttaacgagctattattcttctc 43477548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 15225880 - 15225805
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  15225880 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacagagtgcattc 15225805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 15805093 - 15805142
Alignment:
Q  400 ttgagttgtcgagaactctttctctcttctccctccagcttgtgttaacg 449  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15805093 ttgagttgtcgagaactctttctctcttctccttccagcttgtgttaacg 15805142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 26034903 - 26034839
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  26034903 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 26034839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 6943425 - 6943378
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  6943425 tattgagttgtcgagaactctttcgctcttctccctccagcttgtgtt 6943378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 14898995 - 14899070
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||||||| | |||||||||  ||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  14898995 aattacttgttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattc 14899070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 34561139 - 34561068
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgc 378  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||||    
T  34561139 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgc 34561068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 12488512 - 12488438
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  12488512 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 12488438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 47575361 - 47575295
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    |||||||||| |||||||||||||||||||||||||| ||||| |||||  ||||||||||| ||||    
T  47575361 agtttctcacttattagttgtgaattttctctataaaaagagagctcacacagtgcattccacacac 47575295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 384
Target Start/End: Original strand, 13521364 - 13521441
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 384  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||| |||||||||||||| |||||  |||||||||||    
T  13521364 aattacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattcca 13521441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 3997441 - 3997505
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  3997441 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 3997505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 7902490 - 7902554
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  7902490 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 7902554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 9185063 - 9185127
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||| ||||||||| |||||    
T  9185063 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcac 9185127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 9190928 - 9190992
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||| ||||||||| |||||    
T  9190928 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcac 9190992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 3992689 - 3992836
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||||||||     
T  3992689 acacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaggtggaagtcccacatcggatggatcacacattagtagtgtttatatagtgg 3992788  T
Q  102 ggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 144  Q
    || |||||||| |||     ||| | |||||||| |||||||||||||    
T  3992789 gggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 3992836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 14868447 - 14868522
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||| |||| | |||||||||  ||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  14868447 aattacttcttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattc 14868522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 14877487 - 14877412
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||| |||| | |||||||||  ||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  14877487 aattacttcttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattc 14877412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 14953451 - 14953509
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  14953451 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 14953509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 31297890 - 31297956
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    |||||||||| ||||||||||||| | |||||||||||||||| |||||  ||||||||||| ||||    
T  31297890 agtttctcacttattagttgtgaactctctctataaatagagagctcacacagtgcattccatacac 31297956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 376
Target Start/End: Complemental strand, 32545579 - 32545529
Alignment:
Q  326 ttctcacatattagttgtgaattttctctataaatagagaactcacgtagt 376  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  32545579 ttctcacatattagttgcgaattttctctataaatagagagctcacatagt 32545529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 13521301 - 13521382
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  13521301 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 13521382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 15011196 - 15011269
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 381  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  ||||||||    
T  15011196 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcatt 15011269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 41817573 - 41817492
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||||||  ||||| ||||| |||||||||||||||| ||||||||| |||| |||||    
T  41817573 gtactcaatatgatatattttgagactcgatttgagatgtttttgtactagatctaatatgagaattacttgctcccaaagt 41817492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 7902460 - 7902508
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  7902460 gagatatttttatactagatctaatatgagaattacttgctcccaaagt 7902508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 445
Target Start/End: Original strand, 13065254 - 13065301
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    |||||||||||||| || ||||| ||||||||||||||||||||||||    
T  13065254 tattgagttgtcgaaaaatctttatctcttctccctccagcttgtgtt 13065301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 30054513 - 30054576
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||| |||||| |||||| ||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  30054513 tattaagttgttgagaacactttctctcttctcccttcagtttgtgttaacgagctattcttct 30054576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 445
Target Start/End: Original strand, 39216536 - 39216583
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    ||||||| | || |||||||||||||||||||||||||||||||||||    
T  39216536 tattgaggtttctagaactctttctctcttctccctccagcttgtgtt 39216583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 384
Target Start/End: Original strand, 52742621 - 52742680
Alignment:
Q  325 tttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 384  Q
    |||||| | |||||||||| ||||||||||||||||||||| ||||| |||| |||||||    
T  52742621 tttctcgcgtattagttgtcaattttctctataaatagagagctcacatagttcattcca 52742680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 10713654 - 10713580
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | ||||||||||  ||||||||| |||  ||||||||||||||||||||||  |||||||||    
T  10713654 attacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattc 10713580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 10927424 - 10927350
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | ||||||||||  ||||||||| |||  ||||||||||||||||||||||  |||||||||    
T  10927424 attacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattc 10927350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 25690692 - 25690634
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  25690692 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 25690634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 33462814 - 33462848
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||||||||||||||||||||||||||    
T  33462814 attgagttgtcgagaactctttctctcttctccct 33462848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 41817922 - 41817816
Alignment:
Q  39 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-gggatgcataattaagtgaac 137  Q
    ||||||||||| ||| || | ||||||  ||||||||||| | |||| |||||||||||||| || |||| ||| ||| ||| | |||||||| ||||||    
T  41817922 gaattgaaaaaagtggaagttccacatcggatggatcacatattagtagtgtttatatagtgggggtgtatctctaataggggtacataattatgtgaac 41817823  T
Q  138 gaagtaa 144  Q
    |||||||    
T  41817822 gaagtaa 41817816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 34561202 - 34561121
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||| ||||||| ||||||||| |||| |||||    
T  34561202 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatttaatatgagaattacttgctcccaaagt 34561121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 9185006 - 9185058
Alignment:
Q  215 tttcgtactcaatatgatatatcttggcactcgatcgagatatttttatacta 267  Q
    |||||||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  9185006 tttcgtactcaatatgatatattttggtactcaattgagatatttttgtacta 9185058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 369
Target Start/End: Complemental strand, 15539612 - 15539572
Alignment:
Q  329 tcacatattagttgtgaattttctctataaatagagaactc 369  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  15539612 tcacatattggttgtgaattttctctgtaaatagagaactc 15539572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 52742535 - 52742611
Alignment:
Q  214 ctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactta 289  Q
    |||| ||||||||||||| |||| |||| |||| ||  || |||||||| |||||||||||||| ||||||||||||    
T  52742535 cttttgtactcaatatgacatattttggtactcaatttgatatatttttctactagatctaatacgtgaattactta 52742611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 1150729 - 1150796
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    |||||||| ||| ||||||||| | ||| ||||||| | || ||||||||||||||||||||||||||    
T  1150729 taatatgtgaatcacttgttcccaaagtgtctcacaaagtacttgtgaattttctctataaatagaga 1150796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 437
Target Start/End: Complemental strand, 12875063 - 12875024
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccag 437  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  12875063 tattgagttgtcgagaaccctttctctcttctccatccag 12875024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 42758305 - 42758340
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccct 433  Q
    ||||||||||||||||||||||||||||| ||||||    
T  42758305 tattgagttgtcgagaactctttctctctgctccct 42758340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 7899874 - 7899971
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtg 100  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||| | |||||||||||| |||| ||||||||||||||    
T  7899874 acacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaagtggaagtcccacatca-atggatcacacattagtagtgtttatatagtg 7899971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 8029792 - 8029826
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  8029792 attgagttgtcgggaactctttctctcttctccct 8029826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 31269670 - 31269636
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  31269670 attgagttgtcgggaactctttctctcttctccct 31269636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 31297810 - 31297880
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||| |||||||| |||  |||| ||  ||||||||||| |||||||||||||||| |||||||||    
T  31297810 gtactcaatgtgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattactt 31297880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 33468453 - 33468487
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  33468453 attgagttgtcgggaactctttctctcttctccct 33468487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 37259314 - 37259348
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  37259314 attgagttgtcgggaactctttctctcttctccct 37259348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 371
Target Start/End: Complemental strand, 39320259 - 39320213
Alignment:
Q  325 tttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  39320259 tttctcacttattagttgtgaactttcactataaatagagagctcac 39320213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 34561544 - 34561471
Alignment:
Q  39 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 112  Q
    ||||||||||| ||| || |||||| |  ||||||||||||| |||| || ||||||||||| || ||||||||    
T  34561544 gaattgaaaaaagtggaagtcccacgtcggatggatcacacattagtagtatttatatagtgggggtgtacctc 34561471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 42316078 - 42316140
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagc-ttgtgttaacgtgctatttttct 461  Q
    |||||||||||||||||  |||| ||||||||||||| ||| ||||||||||| |||||| ||||    
T  42316078 tattgagttgtcgagaa--ctttttctcttctccctcaagctttgtgttaacgagctattcttct 42316140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 47575440 - 47575363
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatattttta-tactagatctaatatgtgaattacttactcca 294  Q
    |||||||||||||||||| |||  |||| ||  |||||||||||  ||||||||||||||| |||||||||| |||||    
T  47575440 gtactcaatatgatatattttgagactcaatttgagatattttttgtactagatctaatatatgaattacttgctcca 47575363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 442
Target Start/End: Complemental strand, 2820451 - 2820407
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgt 442  Q
    |||||||| |||||||||||||| |||||||||| |||| |||||    
T  2820451 tattgagtcgtcgagaactctttttctcttctccatccaacttgt 2820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 350
Target Start/End: Complemental strand, 3309970 - 3309918
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaatttt 350  Q
    |||||||| ||||||| |||||||  || ||||||||||||||||||||||||    
T  3309970 taatatgtgaattactagttcctaacgtctctcacatattagttgtgaatttt 3309918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 8660782 - 8660846
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||| ||||||| | ||||  |||| ||||||| ||||||||||||| |||||||||| |||||    
T  8660782 aattatttgttcccaaagttcttcacttattagtagtgaattttctctgtaaatagagagctcac 8660846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 9190871 - 9190923
Alignment:
Q  215 tttcgtactcaatatgatatatcttggcactcgatcgagatatttttatacta 267  Q
    ||||||||||||||||||| || |||| |||| || ||||||||||| |||||    
T  9190871 tttcgtactcaatatgatacattttggtactcaattgagatatttttgtacta 9190923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 15225933 - 15225885
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatacta 267  Q
    |||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  15225933 gtactcaatatgatatattttggtactcaattgagatatttttgtacta 15225885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 23093752 - 23093696
Alignment:
Q  405 ttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||||| ||||||||||||||| ||||||  |||||| ||| |||||| ||||    
T  23093752 ttgtcgagaattctttctctcttctctctccagtctgtgttgacgagctattcttct 23093696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 355
Target Start/End: Complemental strand, 41817510 - 41817462
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctcta 355  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||    
T  41817510 aattacttgctcccaaagtttctcacttattagttgtgaactttctcta 41817462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 3e-52; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 220 - 447
Target Start/End: Original strand, 10532128 - 10532354
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcc 319  Q
    ||||||| || |||||| |||| |||  || ||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |   ||||  ||||||    
T  10532128 tactcaacataatatattttggtacttaattgagatatttttgtactagatctaatatgtgaattacttaatcccaaagtaatgt---attaagtgttcc 10532224  T
Q  320 tagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactc 417  Q
     | |||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||  ||| |||  |||||||| | ||||||||    
T  10532225 caaagtttctcacttattagttgtgaattttctctataagtagagaattcacgtagtgcattccacacaccaaagagttcaattgagtttttgagaactc 10532324  T
Q  418 tttctctcttctccctccagcttgtgttaa 447  Q
    |||||||||||||||||| |||||||||||    
T  10532325 tttctctcttctccctccggcttgtgttaa 10532354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 220 - 449
Target Start/End: Original strand, 13343724 - 13343955
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcc 319  Q
    ||||||| || |||||| |||| |||  || ||||||||||| ||||||||||||||||||||||||||| ||| |||||||| |   |||| |||||||    
T  13343724 tactcaacataatatattttggtacttaattgagatatttttgtactagatctaatatgtgaattacttattcccaaagtaatgt---attaattgttcc 13343820  T
Q  320 tagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactc 417  Q
     | |||||||| | ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||  ||| |||  ||||||| |||||||| ||    
T  13343821 caaagtttctctcttattagttgtgaattttctctataaatagtgaactcaggtaatgcattccacacaccaaagagttcaattgagtggtcgagaattc 13343920  T
Q  418 tttc---tctcttctccctccagcttgtgttaacg 449  Q
    || |   |||||||||||||| || ||||||||||    
T  13343921 ttactgatctcttctccctccggcctgtgttaacg 13343955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 299 - 461
Target Start/End: Complemental strand, 9008881 - 9008716
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggt 395  Q
    |||||||| ||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||||| ||| | ||| |||||||| ||||  ||| ||    
T  9008881 taatatgtgaattatttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctctcatagcgcattccacacaccaaagagt 9008782  T
Q  396 tatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    | |||| |||||||||||||||||||  ||||||||||||||| |||||||||| |||||| ||||    
T  9008781 tctatttagttgtcgagaactctttccttcttctccctccagcctgtgttaacgagctattcttct 9008716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 323 - 449
Target Start/End: Original strand, 10499499 - 10499627
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactcttt 420  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||  ||| |||  |||||||||| || ||||||||    
T  10499499 agtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacaccaaagagttcaattgagttgttgataactcttt 10499598  T
Q  421 ctctcttctccctccagcttgtgttaacg 449  Q
     |||||||||| |||||||||||||||||    
T  10499599 atctcttctccttccagcttgtgttaacg 10499627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 323 - 449
Target Start/End: Original strand, 10504528 - 10504656
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactcttt 420  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||  ||| |||  |||||||||| || ||||||||    
T  10504528 agtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacaccaaagagttcaattgagttgttgataactcttt 10504627  T
Q  421 ctctcttctccctccagcttgtgttaacg 449  Q
     |||||||||| |||||||||||||||||    
T  10504628 atctcttctccttccagcttgtgttaacg 10504656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 10392545 - 10392608
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  10392545 tattgagttgtctagaactctttctctcttctccctccagcttgtgttgacgagctattcttct 10392608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 398 - 445
Target Start/End: Original strand, 26286594 - 26286641
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26286594 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 26286641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 8954646 - 8954710
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  8954646 aattacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcac 8954710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 3285145 - 3285098
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3285145 tattgagttgtggagaactctttctctcttctccctccagcttgtgtt 3285098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 398 - 445
Target Start/End: Original strand, 10387807 - 10387854
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  10387807 tattgagttgtcgataactctttctctcttctccctccagcttgtgtt 10387854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 27256952 - 27256881
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgc 378  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||||    
T  27256952 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgc 27256881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 845987 - 846045
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||    
T  845987 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagaga 846045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 853364 - 853422
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||    
T  853364 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagaga 853422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 1211368 - 1211426
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||    
T  1211368 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagaga 1211426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 8076765 - 8076683
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| |||||| |||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  8076765 aattacttgctcccaaagtttctcacttattagatgtgaactttctctataaatagagagctcacacagtgcattccacacac 8076683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 364
Target Start/End: Complemental strand, 15566099 - 15566033
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||| |||||| |||||||||||    
T  15566099 taatatgtgaattacttgttccaaaagtttctcacatattagttgtgagttttctatataaatagag 15566033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 18426641 - 18426567
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  18426641 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 18426567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 384
Target Start/End: Original strand, 9650339 - 9650416
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 384  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||| |||||||||||||| |||||  |||||||||||    
T  9650339 aattacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattcca 9650416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 838811 - 838875
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  838811 aattacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcac 838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 1203991 - 1204055
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  1203991 aattacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcac 1204055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 11297477 - 11297413
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 362  Q
    |||||||| ||||||||||||  | ||||||||||||||||||||||| ||||||||||||||||    
T  11297477 taatatgtgaattacttgttcacaaagtttctcacatattagttgtgatttttctctataaatag 11297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 19096970 - 19096906
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||  | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  19096970 aattacttgttcgcaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 19096906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 384
Target Start/End: Complemental strand, 2629353 - 2629294
Alignment:
Q  325 tttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 384  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||| |||| |||||||    
T  2629353 tttctcacatattagttgtaaattttctctataaatatagagctcacatagttcattcca 2629294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 7838828 - 7838761
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgtt 317  Q
    ||||||||||| ||||||||||||||| ||||||||||  ||| |||||||||||| |||||||||||    
T  7838828 gagatatttttgtactagatctaatatttgaattacttgttcccaaagtaatatgtgaattacttgtt 7838761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 27257393 - 27257246
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||| |||||||||||||| |||| ||||||||||||||     
T  27257393 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcagatggatcacacattagtagtgtttatatagtgg 27257294  T
Q  102 ggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 144  Q
    || |||| ||| |||     ||| | |||||||| |||||||||||||    
T  27257293 gggtgtatctctaattaatgggggtacataattatgtgaacgaagtaa 27257246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 45169311 - 45169374
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  45169311 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcac 45169374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 47552628 - 47552687
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaatt 310  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||||| || |||||    
T  47552628 gagatatttttgtactaaatctaatatgtgaattacttactcccaaagtaacatataatt 47552687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 1043934 - 1043880
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaata 361  Q
    ||||||||||| | | |||||||||||||||| ||||||||||||||||||||||    
T  1043934 aattacttgtttccaaagtttctcacatattaattgtgaattttctctataaata 1043880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 11017399 - 11017465
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaatta 285  Q
    ||||||||||| |||||| || | |||| || |||||||||||| ||||||||||||||||||||||    
T  11017399 gtactcaatataatatattttagtactcaattgagatatttttacactagatctaatatgtgaatta 11017465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 14259720 - 14259646
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  14259720 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 14259646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 20488662 - 20488588
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  20488662 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 20488588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 9650276 - 9650357
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  9650276 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 9650357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 356
Target Start/End: Complemental strand, 13337470 - 13337388
Alignment:
Q  272 taatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttctcacatattagttgtgaattttctctat 356  Q
    |||||||||||||||||  ||| ||| ||||||  ||||||| ||||  | ||||||||||||||||||||| ||||||||||||    
T  13337470 taatatgtgaattacttgttcccaaattaatat--aattactagttctaaaagtttctcacatattagttgtaaattttctctat 13337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 19641014 - 19640957
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  19641014 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 19640957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 27257015 - 27256934
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  27257015 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 27256934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 36477669 - 36477621
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  36477669 agtttctcacctattagttgtgaaatttctctataaatagagagctcac 36477621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 40864742 - 40864806
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | |||| ||||| ||||||||||||| |||||||||||||||||| |||||    
T  40864742 aattacttgctcccaaagttactcacttattagttgtgaactttctctataaatagagagctcac 40864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 3046215 - 3046168
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  3046215 tattgagttggcgataactctttctctcttctcccttcagcttgtgtt 3046168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 20485286 - 20485227
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  20485286 agtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 20485227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 21671839 - 21671792
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  21671839 tattgagttgctgagaactttttctctcttctccctccagcttgtgtt 21671792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 8268941 - 8268907
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||||||||||||||||||||||||||    
T  8268941 attgagttgtcgagaactctttctctcttctccct 8268907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 10488613 - 10488683
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||||||||||||| |||| |||| ||  ||||||||||| ||||| |||||||||||| |||||||    
T  10488613 gtactcaatatgatatattttggtactcaatttgagatatttttctactaaatctaatatgtgcattactt 10488683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 11017476 - 11017518
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  11017476 agtttctcacttattagttgtgaattttctatataaatagaga 11017518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 16459761 - 16459835
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| || | || |||||||||||||||||||  |||||||||    
T  16459761 attacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcattc 16459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 365
Target Start/End: Complemental strand, 18385203 - 18385145
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    ||||||||||||| | |||||||||| ||| | ||||||| ||||||||||||||||||    
T  18385203 aattacttgttccaaaagtttctcacgtatcaattgtgaactttctctataaatagaga 18385145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 356
Target Start/End: Complemental strand, 13345375 - 13345293
Alignment:
Q  272 taatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttctcacatattagttgtgaattttctctat 356  Q
    |||||||||||||||||  ||| ||| ||||||  ||||||| |||   | ||||||||||||||||||||| ||||||||||||    
T  13345375 taatatgtgaattacttgttcccaaattaatat--aattactagttgtcaaagtttctcacatattagttgtaaattttctctat 13345293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 449
Target Start/End: Complemental strand, 15973392 - 15973347
Alignment:
Q  404 gttgtcgagaactctttctctcttctccctccagcttgtgttaacg 449  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||    
T  15973392 gttgtcgagaactctttctatcttctcccttcaacttgtgttaacg 15973347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 29727211 - 29727247
Alignment:
Q  335 attagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29727211 attagttgtgaattttctctataaatagagagctcac 29727247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 15565686 - 15565611
Alignment:
Q  225 aatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||| |||| |||| ||  ||||||||||| |||||||| | ||||||||||| |||| |||||||||    
T  15565686 aatatgatatattttggtactcaatttgagatatttttgtactagatttcatatgtgaatttcttattccaaaagt 15565611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 1043965 - 1043927
Alignment:
Q  250 cgagatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  1043965 cgagatatttttgtactagatctaatacgtgaattactt 1043927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 4930867 - 4930833
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  4930867 attgagttgtcgggaactctttctctcttctccct 4930833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 8076829 - 8076747
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatattttta-tactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  |||||||||||  ||||||||||||||| |||||||||| |||| |||||    
T  8076829 gtactcaatatgatatattttgaaactcaatttgagatattttttgtactagatctaatatatgaattacttgctcccaaagt 8076747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 10499415 - 10499481
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattac 286  Q
    ||||||| || |||||| |||| |||  || ||||||||||| ||||| ||||||||||||||||||    
T  10499415 tactcaacataatatattttggtacttaattgagatatttttgtactaaatctaatatgtgaattac 10499481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 10504444 - 10504510
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattac 286  Q
    ||||||| || |||||| |||| |||  || ||||||||||| ||||| ||||||||||||||||||    
T  10504444 tactcaacataatatattttggtacttaattgagatatttttgtactaaatctaatatgtgaattac 10504510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 11297495 - 11297461
Alignment:
Q  254 atatttttatactagatctaatatgtgaattactt 288  Q
    |||||||| ||||||||||||||||||||||||||    
T  11297495 atatttttgtactagatctaatatgtgaattactt 11297461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 14928016 - 14928090
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| ||   ||||||||||||||| ||||||  |||||||||    
T  14928016 attacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattc 14928090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 15351482 - 15351556
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| ||   ||||||||||||||| ||||||  |||||||||    
T  15351482 attacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattc 15351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 27238796 - 27238762
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  27238796 attgagttgtcgggaactctttctctcttctccct 27238762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 40864682 - 40864760
Alignment:
Q  222 ctcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||||||| |||  |||| ||  ||||||||||| ||||| |||||||||| ||||||||| |||| |||||    
T  40864682 ctcaatatgatatattttgagactcaatttgagatatttttgtactaaatctaatatgagaattacttgctcccaaagt 40864760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 42626038 - 42626072
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  42626038 attgagttgtcgggaactctttctctcttctccct 42626072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 428
Target Start/End: Original strand, 6590469 - 6590502
Alignment:
Q  395 ttatattgagttgtcgagaactctttctctcttc 428  Q
    |||||||||||||||||||||||||| |||||||    
T  6590469 ttatattgagttgtcgagaactctttgtctcttc 6590502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 356
Target Start/End: Complemental strand, 13338017 - 13337984
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctat 356  Q
    ||||||||||||||||||||| ||||||||||||    
T  13338017 agtttctcacatattagttgtaaattttctctat 13337984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 14927953 - 14928022
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||| ||||| |||||| |||| |||| || ||||||||||  |||||||||||||| ||| |||||||    
T  14927953 gtacttaatataatatattttggtactcaattgagatattttagtactagatctaataggtgcattactt 14928022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 15351419 - 15351488
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||| ||||| |||||| |||| |||| || ||||||||||  |||||||||||||| ||| |||||||    
T  15351419 gtacttaatataatatattttggtactcaattgagatattttagtactagatctaataggtgcattactt 15351488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 29727117 - 29727186
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||| |||||| |||| |||| || || |||||||| ||||| | ||||||||||| ||||||    
T  29727117 gtactcaatataatatattttggtactcaattgaaatatttttgtactatacctaatatgtgagttactt 29727186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 433
Target Start/End: Complemental strand, 4580145 - 4580113
Alignment:
Q  401 tgagttgtcgagaactctttctctcttctccct 433  Q
    ||||||||| |||||||||||||||||||||||    
T  4580145 tgagttgtcaagaactctttctctcttctccct 4580113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 461
Target Start/End: Original strand, 13343994 - 13344034
Alignment:
Q  421 ctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    ||||||||||||||||||||||||||| | |||||| ||||    
T  13343994 ctctcttctccctccagcttgtgttaaagagctattcttct 13344034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 219 - 449
Target Start/End: Original strand, 35456234 - 35456462
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttc 318  Q
    |||||||| || |||||| |||| ||||  | ||||  ||||| ||| ||||||||||||||||||||||| ||  |||||||| |   |||||||||||    
T  35456234 gtactcaacataatatattttggtactcagttgagaagtttttgtacaagatctaatatgtgaattacttaatctcaaagtaatgt---attacttgttc 35456330  T
Q  319 ctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaact 416  Q
    | | |||||||| | ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||  ||  ||| |||||||||||||| ||||    
T  35456331 ccaaagtttctc-cttattagttgtgaattttctctataaatagagaattcacatagtgcattccacacaccaaatagttttattgagttgtcgataact 35456429  T
Q  417 ctttctctcttctccctccagcttgtgttaacg 449  Q
    |||||||||||||||||||||||||||||||||    
T  35456430 ctttctctcttctccctccagcttgtgttaacg 35456462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 251 - 363
Target Start/End: Original strand, 47540841 - 47540954
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaattt 349  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||  |||||||||| | ||||||||||||| | |||||||||||||||||||||||||||    
T  47540841 gagatatttttgtactagatctaatatgtaaattacttagtctcaaagtaatattttaattacttgttcccaaagtttctcacatattagttgtgaattt 47540940  T
Q  350 tctctataaataga 363  Q
    ||||||||||||||    
T  47540941 tctctataaataga 47540954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 382
Target Start/End: Original strand, 11997301 - 11997460
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttc 318  Q
    |||||||||||||||||| || | || | || ||||||||||| ||| |||||||| |||||||||| ||| ||  ||| |||  |   |||||||||||    
T  11997301 gtactcaatatgatatattttcgtacacaattgagatatttttgtacaagatctaacatgtgaattaattaatctcaaaataaagt---attacttgttc 11997397  T
Q  319 ctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    | | ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  11997398 ccaaagtttctca-atattagttgtgaattttctctataaatagagagctcacgtagtacattc 11997460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 251 - 349
Target Start/End: Original strand, 47541257 - 47541356
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaattt 349  Q
    ||||||||||| |||||||| |||| ||||||||||||| ||| |||||||||| | ||||||||||||| | ||||| |||||||||||||||||||||    
T  47541257 gagatatttttgtactagatataatttgtgaattacttaatcctaaagtaatatttaaattacttgttcccaaagtttttcacatattagttgtgaattt 47541356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 8070394 - 8070312
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||    
T  8070394 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccagacac 8070312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 11400003 - 11399939
Alignment:
Q  402 gagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctct 466  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||    
T  11400003 gagttgtcgagaactctttctctcttctccctccagcttgagttgacgagctattcttcttctct 11399939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 381
Target Start/End: Original strand, 6595763 - 6595846
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 381  Q
    |||||||| ||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||| |||||  ||||||||    
T  6595763 taatatgtgaattacttgttcccaaagtttttcacttattagttgtgaattttctctataaatagagagctcacagagtgcatt 6595846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 3034358 - 3034276
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  3034358 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 3034276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 3673301 - 3673219
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  3673301 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 3673219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 3693333 - 3693251
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  3693333 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 3693251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 8888645 - 8888563
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  8888645 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 8888563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 16023256 - 16023191
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaataga 363  Q
    |||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  16023256 taatatgtgaattacttgttcccaaagtttgtcacatattagttgtgaattttctctataaataga 16023191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 405 - 449
Target Start/End: Complemental strand, 28125745 - 28125701
Alignment:
Q  405 ttgtcgagaactctttctctcttctccctccagcttgtgttaacg 449  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28125745 ttgtcgagaactctttctctcttctccctccagcttgtgttaacg 28125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 9706971 - 9707045
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  9706971 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 9707045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 388
Target Start/End: Original strand, 12899113 - 12899203
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagaca 388  Q
    |||||||| ||||||||||||| | |||||||||| |||||| |||||||||||||||||||||  ||  |||| |||||||||| |||||    
T  12899113 taatatgtgaattacttgttcccaaagtttctcacttattagctgtgaattttctctataaataatgagatcacatagtgcattctagaca 12899203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 16749300 - 16749374
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  16749300 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 16749374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 19776599 - 19776525
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  19776599 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 19776525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 361
Target Start/End: Original strand, 47540466 - 47540562
Alignment:
Q  263 tactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttctcacatattagttgtgaattttctctataaata 361  Q
    ||||||||| ||||||| ||||||||| ||| |||||| | || | |||| |||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  47540466 tactagatcaaatatgtaaattacttaatcccaaagtatt-tg-atttacctgtttctaaagtttctcacatattagttgtgaattttctctaaaaata 47540562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 8197167 - 8197110
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  8197167 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 8197110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 8223650 - 8223593
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  8223650 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 8223593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 8889090 - 8888978
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| ||||||||||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  8889090 acacaaattcccatgttgggtagaattagtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaacacacacattagtagtgtttatatagt 8888991  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  8888990 gggggtgtacctc 8888978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 10585569 - 10585633
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  10585569 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 10585633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 3673374 - 3673283
Alignment:
Q  209 tatatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  3673374 tatattttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 3673283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 3693406 - 3693315
Alignment:
Q  209 tatatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  3693406 tatattttttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 3693315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 10708153 - 10708220
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttcttctc 465  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||| || |||  ||||| ||||||||    
T  10708153 tattgagttgtagagaactctttctctcttctccctccatcttgtcttgacgaactattcttcttctc 10708220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 37438940 - 37439003
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  37438940 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcac 37439003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 8883885 - 8883803
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||| ||| || ||  ||||||||||| ||||    
T  8883885 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaataaagagcttacacagtgcattccacacac 8883803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 29943 - 29886
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||| |||||||||||||    
T  29943 aattacttgttcccaaagtttctcacctattagttgtgaaatttttctataaatagag 29886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 3034421 - 3034340
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  3034421 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 3034340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 6595710 - 6595779
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||| |||||| || | |||| ||  |||||||||| ||||||||||||||||||||||||||    
T  6595710 gtactcaatataatatatttttgtactcaattaagatatttttgtactagatctaatatgtgaattactt 6595779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 8070457 - 8070376
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  8070457 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 8070376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 8883948 - 8883867
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  8883948 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 8883867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 8888708 - 8888627
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  8888708 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 8888627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 18012110 - 18012001
Alignment:
Q  254 atatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaatt-actt-gttcctagagtttctcacatattagttgtgaattttc 351  Q
    |||||||| ||||| ||||||||||||||||||||  ||  |||||||||  | ||| |||| ||  | | ||||| |||||||||||||||||||||||    
T  18012110 atatttttctactaaatctaatatgtgaattacttgttcgcaaagtaatacttgatttactttgtatccaaagtttatcacatattagttgtgaattttc 18012011  T
Q  352 tctataaata 361  Q
    ||||||||||    
T  18012010 tctataaata 18012001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 18350154 - 18350211
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  18350154 aattacttgttcccaaagtttctcacctattagttgcgaagtttctctataaatagag 18350211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 369
Target Start/End: Complemental strand, 49020167 - 49020106
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactc 369  Q
    |||||||||||| | | ||| |||| |||||||||||||||||||||||||||| |||||||    
T  49020167 attacttgttcccaaaatttatcacttattagttgtgaattttctctataaatatagaactc 49020106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 14425222 - 14425286
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| |||||| |||||| |||||||| ||||||||| |||||    
T  14425222 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctagaaatagagagctcac 14425286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 8488771 - 8488834
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||    
T  8488771 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcac 8488834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 449
Target Start/End: Original strand, 17025554 - 17025605
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacg 449  Q
    |||||| ||||||||||||||||| ||||| ||||||| |||||||||||||    
T  17025554 tattgaattgtcgagaactctttccctcttatccctccggcttgtgttaacg 17025605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 51923043 - 51922992
Alignment:
Q  313 ttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  51923043 ttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 51922992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 4106722 - 4106768
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactca 370  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  4106722 gtttctcacttattagttgtaaattctctctataaatagagaactca 4106768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Original strand, 4110574 - 4110620
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactca 370  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  4110574 gtttctcacttattagttgtaaattctctctataaatagagaactca 4110620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 8070850 - 8070741
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| || || ||| |||| |||||||||  |||||||||||  || || ||||||||  |||||| |||||| |||| ||||||||||||||     
T  8070850 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaa-tggaagtcccacatcggatggaacacacattagtagtgtttatatagtgg 8070752  T
Q  102 ggttgtacctc 112  Q
    || ||||||||    
T  8070751 gggtgtacctc 8070741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10585102 - 10585211
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||||||||     
T  10585102 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtagtgtttatatagtgg 10585200  T
Q  102 ggttgtacctc 112  Q
    || ||||||||    
T  10585201 gggtgtacctc 10585211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 15965753 - 15965707
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactca 370  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  15965753 gtttctcacttattagttgtaaattctctctataaatagagaactca 15965707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 15969677 - 15969631
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactca 370  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  15969677 gtttctcacttattagttgtaaattctctctataaatagagaactca 15969631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 370
Target Start/End: Complemental strand, 15973601 - 15973555
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactca 370  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||    
T  15973601 gtttctcacttattagttgtaaattctctctataaatagagaactca 15973555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 22758560 - 22758634
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | | |||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  22758560 attacttgtttccaaaatttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 22758634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3673739 - 3673628
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  3673739 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacacattagtagtgtttatatagt 3673641  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  3673640 gggggtgtacctc 3673628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3693793 - 3693682
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    ||||||||||||| || ||| |||| || ||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  3693793 acacaaattctcatgttgggtagaactaatgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacacattagtagtgtttatatagt 3693695  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  3693694 gggggtgtacctc 3693682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 8884344 - 8884232
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| |||||||||  |||||||||||  || || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  8884344 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaaatggaagtcccacatcggatggaacacacacattagtagtgtttatatagt 8884245  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  8884244 gggggtgtacctc 8884232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 10585539 - 10585587
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  10585539 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 10585587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 45903924 - 45903988
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||||| |||||||||| ||||| ||  ||| |||||||||||||||||| |||||    
T  45903924 aattacttgctcctaaagtttctcacttattactttggaactttctctataaatagagagctcac 45903988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 12965336 - 12965371
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccct 433  Q
    ||||||||||||| ||||||||||||||||||||||    
T  12965336 tattgagttgtcgggaactctttctctcttctccct 12965371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 14425169 - 14425220
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 270  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  14425169 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 14425220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 53502447 - 53502518
Alignment:
Q  214 ctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaatt 284  Q
    |||| |||||| ||| ||||||| ||||||||| ||  ||||||||||| ||||| ||||||||||||||||    
T  53502447 cttttgtactcgataggatatattttggcactcaatttgagatatttttgtactatatctaatatgtgaatt 53502518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 7570666 - 7570700
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  7570666 attgagttgtcgggaactctttctctcttctccct 7570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 23660914 - 23660948
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  23660914 attgagttgtcgggaactctttctctcttctccct 23660948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 23665573 - 23665607
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  23665573 attgagttgtcgggaactctttctctcttctccct 23665607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 24037821 - 24037855
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  24037821 attgagttgtcgggaactctttctctcttctccct 24037855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 449
Target Start/End: Original strand, 25726231 - 25726277
Alignment:
Q  403 agttgtcgagaactctttctctcttctccctccagcttgtgttaacg 449  Q
    ||||||||||||||||||||||||||||  | | |||||||||||||    
T  25726231 agttgtcgagaactctttctctcttctcatttcggcttgtgttaacg 25726277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 46964657 - 46964623
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  46964657 attgagttgtcgggaactctttctctcttctccct 46964623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 55326423 - 55326389
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  55326423 attgagttgtcgggaactctttctctcttctccct 55326389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3034817 - 3034706
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  ||||||  ||||||  |||| |||||||||||||    
T  3034817 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaatacacacattagtagtgtttatatagt 3034719  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  3034718 gggggtgtacctc 3034706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 12899092 - 12899129
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  12899092 gagatatttttgtactaaatctaatatgtgaattactt 12899129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 16023277 - 16023240
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||| || ||||||||||||||||||||||||||    
T  16023277 gagatattgttgtactagatctaatatgtgaattactt 16023240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 19340172 - 19340119
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagt 376  Q
    ||||||| |||||||| ||||||||||||| |||||||||| | ||||| ||||    
T  19340172 agtttctaacatattatttgtgaattttctttataaatagatagctcacatagt 19340119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 447
Target Start/End: Original strand, 32746243 - 32746296
Alignment:
Q  394 gttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaa 447  Q
    ||||| |||||||||||| || ||||||||||||||| || ||| |||||||||    
T  32746243 gttatgttgagttgtcgataattctttctctcttctctcttcagtttgtgttaa 32746296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 45903861 - 45903942
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||| ||||||| |||  |||| ||  ||||||||||| || ||||||||||||| ||||||||| |||| |||||    
T  45903861 gtactcaataagatatattttgagactcaatttgagatatttttgtattagatctaatatgagaattacttgctcctaaagt 45903942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 429118 - 429062
Alignment:
Q  333 atattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    |||||| |||||||||||||||||||||| ||| |||||  ||| ||||||| ||||    
T  429118 atattacttgtgaattttctctataaataaagagctcacaaagttcattccacacac 429062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 433
Target Start/End: Complemental strand, 3419632 - 3419600
Alignment:
Q  401 tgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||| ||||||||||||||||||||||    
T  3419632 tgagttgtcgggaactctttctctcttctccct 3419600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 428
Target Start/End: Original strand, 12112118 - 12112146
Alignment:
Q  400 ttgagttgtcgagaactctttctctcttc 428  Q
    |||||||||||||||||||||||||||||    
T  12112118 ttgagttgtcgagaactctttctctcttc 12112146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 53358805 - 53358757
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||| |||| ||||||||||||| ||||| |||||||||||| |||||    
T  53358805 agtttttcacttattagttgtgaactttctttataaatagagagctcac 53358757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 219 - 441
Target Start/End: Complemental strand, 256612 - 256391
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttc 318  Q
    ||||||||||| |||||| || |||||| || || |||||||| || ||||||||||||||||||||| || ||  |||||||| |   |||||||||||    
T  256612 gtactcaatataatatattttcgcactcaattgaaatatttttgtattagatctaatatgtgaattacctaatctcaaagtaatgt---attacttgttc 256516  T
Q  319 ctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaact 416  Q
    | | |||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||||| || ||||  ||| ||| |||||||||||||| ||||    
T  256515 ccaaagtttctcacttattagttgtgaatattctctataaatagagaaatcacatagtgcatttcacacaccaaagagttctattgagttgtcgataact 256416  T
Q  417 ctttctctcttctccctccagcttg 441  Q
    ||||||||||||| |||||| ||||    
T  256415 ctttctctcttcttcctccaacttg 256391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 220 - 456
Target Start/End: Original strand, 15990990 - 15991225
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcc 319  Q
    |||||||||| |||||| ||   |||| || |||||||||||||||||| |||||| ||||||||||||| | | ||| |||| |   |||||||||| |    
T  15990990 tactcaatataatatattttattactcaattgagatatttttatactaggtctaatttgtgaattacttaataccaaaataatgt---attacttgtttc 15991086  T
Q  320 tagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactc 417  Q
     | |||||||||| |||||||||||||||||||||| ||||||||||| |   |||||||||||| ||||  |||  || ||||||||| |||| |||||    
T  15991087 caaagtttctcacttattagttgtgaattttctctacaaatagagaacacgtatagtgcattccacacaccaaagatttctattgagttatcgacaactc 15991186  T
Q  418 tttctctcttctccctccagcttgtgttaacgtgctatt 456  Q
    |||||||||||||||||||  ||||||||| | ||||||    
T  15991187 tttctctcttctccctccaagttgtgttaatgagctatt 15991225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 220 - 371
Target Start/End: Original strand, 2759671 - 2759819
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcc 319  Q
    |||||||||  |||||| |||| | || || ||||||||||| || |||||||||||||||||||||||| | | |||||||| |   |||||||||||     
T  2759671 tactcaataaaatatattttggtattcaattgagatatttttttattagatctaatatgtgaattacttaatgccaaagtaatgt---attacttgttca 2759767  T
Q  320 tagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
     | ||||||| || ||||||||||||||||||||| |||| ||||| |||||    
T  2759768 aaaagtttcttacttattagttgtgaattttctctgtaaacagagagctcac 2759819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 9751106 - 9751225
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaattt 349  Q
    ||||||||||| || | ||||||||  |||||||||||  ||| |||||||||||| ||||| ||||  | | |||||| || |||||||||||||||||    
T  9751106 gagatatttttgtattggatctaatgagtgaattacttcatcccaaagtaatatgtgaattatttgtgtccaaagtttcacatatattagttgtgaattt 9751205  T
Q  350 tctctataaatagagaactc 369  Q
    ||| ||||||||||||||||    
T  9751206 tctatataaatagagaactc 9751225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 16625131 - 16625056
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||||||| | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  16625131 aattacttgttcccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 16625056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 19994844 - 19994894
Alignment:
Q  395 ttatattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19994844 ttatattgagttgtagagaactctttctctcttctccctccagcttgtgtt 19994894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 389
Target Start/End: Original strand, 2862842 - 2862933
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    |||||||| ||||||||||||| | |||| | |||||| || |||||||||||||||||||||||||| ||||| |||| ||||||| ||||    
T  2862842 taatatgtgaattacttgttcccaaagttgcacacatactatttgtgaattttctctataaatagagagctcacatagttcattccatacac 2862933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 31477084 - 31477158
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  31477084 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 31477158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 2759484 - 2759552
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||||| |||||| |||| |||| || ||||||||||| || |||||||||||||||||||||||    
T  2759484 tactcaatataatatattttggtactcaattgagatatttttttattagatctaatatgtgaattactt 2759552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 27073700 - 27073636
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| ||||| |||||||||||| |||||    
T  27073700 aattacttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcac 27073636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 461
Target Start/End: Complemental strand, 17600013 - 17599950
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||||| ||| |||||| ||||    
T  17600013 tattgagttgtcgaaaactctttctctcttctccatccaacttgtgttgacgagctattcttct 17599950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 461
Target Start/End: Complemental strand, 17914231 - 17914168
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||||| ||| |||||| ||||    
T  17914231 tattgtgttttcgagaactctttctcacttctccctccagcttgtgttgacgagctattcttct 17914168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 24588576 - 24588639
Alignment:
Q  326 ttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||| |||||||| ||||||||||||||||||||||| |||||  ||||||||||| ||||    
T  24588576 ttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacac 24588639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 15704291 - 15704365
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  15704291 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 15704365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 6112137 - 6112213
Alignment:
Q  306 taattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| ||| | |||||||||| ||||||||| ||| ||||| |||||||||||| |||||  |||||||||    
T  6112137 taattacttgctcccaaagtttctcacttattagttgggaactttctatataaatagagagctcacacagtgcattc 6112213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 26981306 - 26981246
Alignment:
Q  311 acttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| | |||||||||| ||||||||||||| ||||| |||||||||||| |||||    
T  26981306 acttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcac 26981246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 285
Target Start/End: Original strand, 28964130 - 28964206
Alignment:
Q  210 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaatta 285  Q
    |||| ||| |||||||||||||||||| |||| |||| ||  ||||||||||| ||||||||||||||| |||||||    
T  28964130 atatattttgtactcaatatgatatattttggtactcaatttgagatatttttgtactagatctaatatttgaatta 28964206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 402 - 449
Target Start/End: Original strand, 2759865 - 2759912
Alignment:
Q  402 gagttgtcgagaactctttctctcttctccctccagcttgtgttaacg 449  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||    
T  2759865 gagttgtcgataactctttctctcttctcccttcggcttgtgttaacg 2759912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 288
Target Start/End: Original strand, 2882126 - 2882161
Alignment:
Q  253 gatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||||||||||||||||||||||||||||    
T  2882126 gatatttttatactagatctaatatgtgaattactt 2882161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 16761097 - 16761022
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctc-tataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| |||| ||||||||||||||||||  |||||||||    
T  16761097 attacttgtttccaaagtttctcacttattagttgtaaattatctcctataaatagagaactcacacagtgcattc 16761022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 19772407 - 19772466
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  19772407 agtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 19772466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 27324441 - 27324504
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||    
T  27324441 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcac 27324504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 288
Target Start/End: Original strand, 2862824 - 2862858
Alignment:
Q  254 atatttttatactagatctaatatgtgaattactt 288  Q
    |||||||||||||||||||||||||||||||||||    
T  2862824 atatttttatactagatctaatatgtgaattactt 2862858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 22949930 - 22949872
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  22949930 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 22949872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 22953886 - 22953828
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  22953886 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 22953828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 23872374 - 23872316
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  23872374 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 23872316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 23876330 - 23876272
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||| | |||| ||||||||||||||||||||||  |||||||||    
T  23876330 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattc 23876272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 445
Target Start/End: Original strand, 12405812 - 12405855
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    |||||||||||||||||||||||||||||   |||||||||||||||    
T  12405812 attgagttgtcgagaactctttctctctt---cctccagcttgtgtt 12405855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 18387647 - 18387583
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| || | |||||||||| ||||| ||||||| ||||| |||||||||||| |||||    
T  18387647 aattacttgtccccaaagtttctcacctattaattgtgaagtttctgtataaatagagagctcac 18387583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 389
Target Start/End: Original strand, 2882145 - 2882236
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    |||||||| ||||||||||||| | | || | |||||| || |||||||||||||||||||||  ||| ||||| |||| ||||||| ||||    
T  2882145 taatatgtgaattacttgttcccaaatttgcacacatactatttgtgaattttctctataaattcagagctcacatagttcattccatacac 2882236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 14073834 - 14073787
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactca 370  Q
    |||||||||  ||||||||||||| |||||||||||||||||| ||||    
T  14073834 agtttctcatctattagttgtgaaatttctctataaatagagagctca 14073787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 363
Target Start/End: Original strand, 14322790 - 14322845
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaataga 363  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||    
T  14322790 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaataga 14322845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 434
Target Start/End: Original strand, 16835608 - 16835643
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccctc 434  Q
    |||||||||||| |||||||||||||||||||||||    
T  16835608 attgagttgtcgggaactctttctctcttctccctc 16835643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 11428605 - 11428571
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  11428605 attgagttgtcgggaactctttctctcttctccct 11428571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 14509618 - 14509584
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  14509618 attgagttgtcgggaactctttctctcttctccct 14509584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 22807065 - 22806991
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||  |||||||||| || | ||||||||||||| ||||||||  |||||||||    
T  22807065 attacttgtttccaaagtttctcatttattagttgtaaactatctctataaatagggaactcacacagtgcattc 22806991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 13657511 - 13657548
Alignment:
Q  394 gttatattgagttgtcgagaactctttctctcttctcc 431  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  13657511 gttatattgagttatcgataactctttctctcttctcc 13657548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 15645771 - 15645702
Alignment:
Q  75 cacacactagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaagtaa 144  Q
    |||||| ||||||| |||||||||||||| || ||||| ||  || | |||||||| |||||||||||||    
T  15645771 cacacattagtggtatttatatagtgagggtgcacctctaagcggctacataattatgtgaacgaagtaa 15645702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 6112108 - 6112156
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| ||||||||||||||||  |||||||| |||| |||||    
T  6112108 gagatatttttgtactagatctaatatgataattacttgctcccaaagt 6112156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 15641009 - 15640961
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||| |||| ||||||||||||||| ||||||||||||| || |||||    
T  15641009 agtttatcacgtattagttgtgaattctctctataaatagtgagctcac 15640961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 16625184 - 16625136
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatacta 267  Q
    |||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  16625184 gtactcaatatgatatattttggtactcaattgagatatttttgtacta 16625136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 231 - 382
Target Start/End: Complemental strand, 71920 - 71772
Alignment:
Q  231 atatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttctc 330  Q
    |||||| |||| |||| || ||||||||||| ||||||| ||||||||| ||||||||| |   |||||||| |   |||||||||||| | ||||||||    
T  71920 atatattttggtactcaattgagatatttttgtactagagctaatatgtaaattacttaatgttaaagtaatgt---attacttgttcccaaagtttctc 71824  T
Q  331 acatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    || |||||||||||||||||||||||||||||||| |||||  |||||||||    
T  71823 acttattagttgtgaattttctctataaatagagagctcacacagtgcattc 71772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 445
Target Start/End: Original strand, 147841 - 147888
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    |||||| |||||||||||||||| ||||||| ||||| ||||||||||    
T  147841 tattgaattgtcgagaactctttatctcttccccctctagcttgtgtt 147888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 307 - 433
Target Start/End: Original strand, 17452965 - 17453098
Alignment:
Q  307 aattacttgttcctagagtttctcac-----atattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac--aagggttata 399  Q
    ||||||||||||| | ||||||||||     | ||||||||| ||||||||||||||||||||| ||||| |||| ||||||| ||||  ||| ||| ||    
T  17452965 aattacttgttcccaaagtttctcacttattagattagttgtaaattttctctataaatagagatctcacatagtacattccacacaccaaagagtttta 17453064  T
Q  400 ttgagttgtcgagaactctttctctcttctccct 433  Q
    ||||||||||||||||||||||||||||||||||    
T  17453065 ttgagttgtcgagaactctttctctcttctccct 17453098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 299 - 379
Target Start/End: Complemental strand, 22845126 - 22845045
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgca 379  Q
    |||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||    
T  22845126 taatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacatagtgca 22845045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 25375613 - 25375529
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||| ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| || ||  |||||||||    
T  25375613 taatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagcttacacagtgcattc 25375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 361
Target Start/End: Complemental strand, 30635590 - 30635457
Alignment:
Q  225 aatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagag 324  Q
    ||||| |||||| |||| |||| || ||||||||||| ||||||| ||||||||||||||| ||| |   || ||||| |   ||||||||||||   ||    
T  30635590 aatataatatattttggtactcaattgagatatttttttactagagctaatatgtgaattatttaatgtcaatgtaatgt---attacttgttccccaag 30635494  T
Q  325 tttctcacatattagttgtgaattttctctataaata 361  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  30635493 tttctcacttattagttgtgaattttctttataaata 30635457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 22845179 - 22845110
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||| |||||| |||| |||| || ||||||||||| ||||||||||||||||||||||||||    
T  22845179 gtactcaatataatatattttggtactcaattgagatatttttgtactagatctaatatgtgaattactt 22845110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 6856912 - 6856848
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  6856912 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 6856848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 1284228 - 1284154
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  1284228 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 1284154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 26897342 - 26897285
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  26897342 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 26897285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 34070134 - 34070077
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  34070134 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 34070077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 30641481 - 30641545
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 362  Q
    |||||||| ||||||||||||| | |||||||||||||||||||| || ||||||||||||||||    
T  30641481 taatatgtgaattacttgttccaaaagtttctcacatattagttgagatttttctctataaatag 30641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 19578029 - 19578092
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||||||||| |||||||||||||||||||||||||  | |||||||| | |||||||||    
T  19578029 tattgagttgtcgaaaactctttctctcttctccctccagggtttgttaacgagttatttttct 19578092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 377669 - 377743
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 381  Q
    |||||||||| |||| |||||||||| | ||||||||||| ||| |||||||||||||| ||||| || ||||||    
T  377669 aattacttgtccctaaagtttctcaccttttagttgtgaagtttttctataaatagagagctcacataatgcatt 377743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 10160115 - 10160181
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| |||||  ||||||||||| ||||    
T  10160115 agtttctcacttattagttgtgaactttctctacaaatagagagctcacacagtgcattccacacac 10160181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 17327773 - 17327711
Alignment:
Q  309 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||| | | |||||||| |||||||||| ||||||||||||||||||||| |||||    
T  17327773 ttacttgttcccaaaatttctcacttattagttgtaaattttctctataaatagagagctcac 17327711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 30344312 - 30344370
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  30344312 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 30344370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 395 - 461
Target Start/End: Original strand, 40847037 - 40847103
Alignment:
Q  395 ttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| || | ||| |||||| ||||    
T  40847037 ttatattgagttgtcgagaattctttctctcttctccatccagcttctgctgacgagctattcttct 40847103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 7559667 - 7559736
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||||||||||||| |||| || | || || |||||||| |||||||||| |||||||||||||||    
T  7559667 gtactcaatatgatatattttggtacacaattgaaatatttttgtactagatctgatatgtgaattactt 7559736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 24292841 - 24292898
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| | ||||||||||| |||||||||||||||||    
T  24292841 aattacttgttcccaaagtttctcaccttttagttgtgaagtttctctataaatagag 24292898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 28856223 - 28856150
Alignment:
Q  39 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 112  Q
    ||||||||||| ||| || |||||||| |||||||||||||| |||| |||||||||| ||| || ||||||||    
T  28856223 gaattgaaaaaagtggaagtcccacatcagatggatcacacattagtagtgtttatatggtggggatgtacctc 28856150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 384
Target Start/End: Complemental strand, 30658876 - 30658815
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 384  Q
    |||||||||| ||||||||||||| |||||| ||||||||||| |||||  |||||||||||    
T  30658876 agtttctcacttattagttgtgaactttctccataaatagagagctcacacagtgcattcca 30658815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 17452904 - 17452972
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||||| |||||| |||| |||| || ||||||||||| |||||||| ||| |||||||||||||    
T  17452904 tactcaatataatatattttggtactcaattgagatatttttgtactagatataacatgtgaattactt 17452972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 30641460 - 30641508
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  30641460 gagatatttttgtactagatctaatatgtgaattacttgttccaaaagt 30641508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 28855917 - 28855838
Alignment:
Q  210 atatctttcgtactcaatatgatatatcttggcactcga-tcgagatatttttatactagatctaatatgtgaattactt 288  Q
    |||| ||| |||||||||||||||||| |||  |||| | | ||||||||||| |||||||||||||||| |||||||||    
T  28855917 atatattttgtactcaatatgatatattttgatactcaagttgagatatttttgtactagatctaatatgagaattactt 28855838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 30629574 - 30629531
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaatttt 350  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
T  30629574 aattacttgttcctaaagtttttcacatattagttgtgaatttt 30629531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 6296832 - 6296942
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| ||  |||||||  ||||||||||||| |||| ||||||||||||||     
T  6296832 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagacccacatcggatggatcacacattagtagtgtttatatagtgg 6296931  T
Q  102 ggttgtacctc 112  Q
    || ||||||||    
T  6296932 gggtgtacctc 6296942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10159639 - 10159749
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| || ||  || |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||| | |||| ||||||||||||||     
T  10159639 acacaaattcccatgttaggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaacacatattagtagtgtttatatagtgg 10159738  T
Q  102 ggttgtacctc 112  Q
    || ||||||||    
T  10159739 gggtgtacctc 10159749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 23068133 - 23068207
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||| | |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  23068133 attacttgtttccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattc 23068207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 371
Target Start/End: Original strand, 7559757 - 7559794
Alignment:
Q  334 tattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||||||||||||||||||||||||| |||||    
T  7559757 tattagttgtgaattttctctataaatagagagctcac 7559794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 10160036 - 10160117
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatc-gagatattttta-tactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||||||||| |||  |||| ||  |||||||||||  |||||||||||||||| |||||||||||||| |||||    
T  10160036 tactcaatatgatatattttgagactcaatttgagatattttttgtactagatctaatatgagaattacttactcccaaagt 10160117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 24286273 - 24286330
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | || ||||||| | ||||||||||| |||||||||||||||||    
T  24286273 aattacttgttcccaaagcttctcaccttttagttgtgaagtttctctataaatagag 24286330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 25375666 - 25375597
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||| ||| || |||| |||| |  ||||||| ||| ||||||||||||||||||||||||||    
T  25375666 gtactcaatataatagattttggtactcaactgagatatatttgtactagatctaatatgtgaattactt 25375597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 319
Target Start/End: Original strand, 19589052 - 19589120
Alignment:
Q  252 agatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgt-aattacttgttcc 319  Q
    ||||||||||||| |||||||| ||||||||||||||  | | |||||||||| | |||||||||||||    
T  19589052 agatatttttatattagatctagtatgtgaattacttctttcgaaagtaatatttgaattacttgttcc 19589120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 363
Target Start/End: Original strand, 3238840 - 3238871
Alignment:
Q  332 catattagttgtgaattttctctataaataga 363  Q
    ||||||||||||||||||||||||||||||||    
T  3238840 catattagttgtgaattttctctataaataga 3238871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 371
Target Start/End: Complemental strand, 9785862 - 9785799
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| | | |||||||||| |||||||||| || | || |||||||||||||||||||    
T  9785862 attacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaactcac 9785799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 13290942 - 13291025
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctcta-taaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||||||| | |  ||||||||||||||||||||||| |||||| | |||| ||| ||||| |||| ||||||| ||||    
T  13290942 aattacttgttcccaaaaattctcacatattagttgtgaattatctctatttaatatagagctcacatagttcattccatacac 13291025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 30651560 - 30651525
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccct 433  Q
    ||||||||||||| ||||||||||||||||||||||    
T  30651560 tattgagttgtcgggaactctttctctcttctccct 30651525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 1934443 - 1934477
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  1934443 attgagttgtcgggaactctttctctcttctccct 1934477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 6297200 - 6297290
Alignment:
Q  210 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||| ||| |||||||||||||||||| |||  |||| ||  |||||| |||| |||||||||||||||| ||||| ||| |||| |||||    
T  6297200 atatattttgtactcaatatgatatattttgagactcaatttgagatacttttgtactagatctaatatgagaattgcttgctcccaaagt 6297290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 9184867 - 9184901
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  9184867 attgagttgtcgggaactctttctctcttctccct 9184901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 17452512 - 17452573
Alignment:
Q  82 tagtggtgtttatatagtgaggttgtacctcaaatgggatgcataattaagtgaacgaagtaa 144  Q
    |||| |||||||||||||| ||||||||||  || ||||| |||||||| |||||||||||||    
T  17452512 tagtagtgtttatatagtg-ggttgtacctttaaagggatacataattatgtgaacgaagtaa 17452573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 31327398 - 31327364
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  31327398 attgagttgtcgggaactctttctctcttctccct 31327364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 42248942 - 42248885
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||| | | |||||||||| ||||||||  ||| |||||||||||||||||    
T  42248942 aattacttgtttccaaagtttctcacctattagttcggaagtttctctataaatagag 42248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 30619599 - 30619543
Alignment:
Q  295 aaagtaatatgt-aattacttgttcctagagtttctcacatattagttgtgaatttt 350  Q
    |||||||||| | ||||||||||||||| |  || ||||||||||||||||||||||    
T  30619599 aaagtaatatttgaattacttgttcctaaaaattttcacatattagttgtgaatttt 30619543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 38426927 - 38426962
Alignment:
Q  334 tattagttgtgaattttctctataaatagagaactca 370  Q
    ||||||||||||||||||| |||||||||||||||||    
T  38426927 tattagttgtgaattttct-tataaatagagaactca 38426962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 38591862 - 38591822
Alignment:
Q  394 gttatattgagttgtcgagaactctttctctcttctccctc 434  Q
    ||||||||||||| |||| | ||||||||||||||||||||    
T  38591862 gttatattgagttatcgatatctctttctctcttctccctc 38591822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 8e-22; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 1067205 - 1067132
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1067205 taatatgtgaattacgtgttcctaaagtttctcacttattagttgtgaattttctctataaatagagaactcac 1067132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 307 - 387
Target Start/End: Complemental strand, 14804219 - 14804139
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagac 387  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||| | ||||||| ||||    
T  14804219 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacgcaatgcattctagac 14804139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 13894040 - 13893973
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    |||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||    
T  13894040 taatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagaga 13893973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 398 - 461
Target Start/End: Complemental strand, 16036265 - 16036202
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  16036265 tattaagttgtcgagaactctttctctcttctccctccagcttgtgttgacgagctattcttct 16036202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 40232767 - 40232849
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  40232767 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 40232849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 371
Target Start/End: Original strand, 17213814 - 17213887
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||| ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  17213814 taatatgtgaattacttgttcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 17213887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 14819687 - 14819623
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  14819687 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 14819623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 22428575 - 22428639
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  22428575 aattacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcac 22428639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 398 - 449
Target Start/End: Complemental strand, 12260637 - 12260586
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacg 449  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  12260637 tattgagttgttgagaactctttctctcttctcccttcagcttgtgttaacg 12260586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 3094804 - 3094722
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||||||||||||  ||||  ||||||||||| ||||    
T  3094804 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagttcacacagtgcattccacacac 3094722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 39243403 - 39243477
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  39243403 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 39243477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 39246958 - 39247032
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  39246958 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 39247032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 41097337 - 41097419
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||| ||||| ||||    
T  41097337 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacac 41097419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 41387355 - 41387429
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  41387355 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 41387429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 52100601 - 52100658
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  52100601 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 52100658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 23285210 - 23285274
Alignment:
Q  299 taatatgtaattacttgttcctagagtttctcacatattagttgtgaattttctctataaataga 363  Q
    |||||| | |||||||||||| | || ||||||||||||| ||||||||||||||||||||||||    
T  23285210 taatatttgattacttgttcccaaaggttctcacatattaattgtgaattttctctataaataga 23285274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 456
Target Start/End: Complemental strand, 8138274 - 8138215
Alignment:
Q  397 atattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatt 456  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| || ||| ||||||    
T  8138274 atattgagttgtcgagaactctttctctcttctccattcagcttgtattgacgagctatt 8138215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 441
Target Start/End: Complemental strand, 20107996 - 20107953
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttg 441  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  20107996 tattgagttgtcgagaactctttctctcttctccctgcagcttg 20107953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 1924450 - 1924508
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  1924450 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 1924508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 20923464 - 20923522
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  20923464 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 20923522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 3094867 - 3094786
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  3094867 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 3094786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 21498366 - 21498309
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  21498366 aattacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagag 21498309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 19725223 - 19725303
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||| || | || ||||||||||| ||||| |||| |||| |||||||||| |||| |||||    
T  19725223 gtactcaatatgatatattttggtacacaattgagatatttttgtactatatctgatatttgaattacttgctcccaaagt 19725303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 7882632 - 7882597
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccct 433  Q
    ||||||||||||||||||||||||||||||||||||    
T  7882632 tattgagttgtcgagaactctttctctcttctccct 7882597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 39037047 - 39037082
Alignment:
Q  325 tttctcacatattagttgtgaattttctctataaat 360  Q
    ||||||||||||||||||||||||||||||||||||    
T  39037047 tttctcacatattagttgtgaattttctctataaat 39037082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 391
Target Start/End: Original strand, 23254568 - 23254650
Alignment:
Q  309 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacacaa 391  Q
    ||||||||| ||| | |||||||||||||| || | ||||||||||||||||||||| | |||  ||||||||| | ||||||    
T  23254568 ttacttgtttctaaaatttctcacatattaattataaattttctctataaatagagagcacacaaagtgcattctacacacaa 23254650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 19727142 - 19727073
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||||||||||||| |||  || | || ||||| ||||| |||||||||| |||||||||||||||    
T  19727142 gtactcaatatgatatattttgaaacacaattgagatgtttttgtactagatctgatatgtgaattactt 19727073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 2367758 - 2367694
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| |||||| ||| ||  ||||||||||||||||| |||||    
T  2367758 aattacttgttcccaaagtttctcacctattagctgtaaagcttctctataaatagagagctcac 2367694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 16836612 - 16836680
Alignment:
Q  220 tactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||||| |||||| |||| |||| || ||||||||||| || || ||||||||||||| ||||||    
T  16836612 tactcaatataatatattttggtactcaattgagatatttttgtattatatctaatatgtgagttactt 16836680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 26199073 - 26199009
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | ||||| |||| | |||| |||||| |||||||||||||||||| |||||    
T  26199073 aattacttgttcccaaagtttttcaccttttagctgtgaagtttctctataaatagagagctcac 26199009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 382
Target Start/End: Original strand, 27308258 - 27308342
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||| ||||| ||||||  | ||||||||  |||||||| |||||||||||||||||||||||  ||||| |||| |||||    
T  27308258 taatatgtgaattatttgttctcaaagtttctcttatattagtagtgaattttctctataaatagagtgctcacatagttcattc 27308342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 40232737 - 40232785
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  40232737 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 40232785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 41097307 - 41097355
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  41097307 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 41097355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 1067246 - 1067191
Alignment:
Q  231 atatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattac 286  Q
    |||||| |||| |||| || ||||||||||  ||||||||||||||||||||||||    
T  1067246 atatattttggtactcaattgagatattttggtactagatctaatatgtgaattac 1067191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 26199126 - 26199075
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 270  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  26199126 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 26199075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 8267247 - 8267289
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||    
T  8267247 agtttatcacttattagttgtgaactttctctataaatagaga 8267289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 16834120 - 16834086
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  16834120 attgagttgtcgggaactctttctctcttctccct 16834086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 16836698 - 16836740
Alignment:
Q  340 ttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||||||||||||||||||| |||||  |||||||||    
T  16836698 ttgtgaattttctctataaatagagagctcacacagtgcattc 16836740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 23192276 - 23192310
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  23192276 attgagttgtcgggaactctttctctcttctccct 23192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 25844400 - 25844366
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  25844400 attgagttgtcgggaactctttctctcttctccct 25844366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 33055918 - 33055812
Alignment:
Q  39 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctcaaat-----gggatgcataattaagt 133  Q
    |||||||||||  || || ||||||||  ||||||||||||| |||| ||||||||||||||  | |||||||  |||     ||||| |||||||||||    
T  33055918 gaattgaaaaaaatggaagtcccacatcggatggatcacacattagtagtgtttatatagtggaggtgtacctgtaattaatggggatacataattaagt 33055819  T
Q  134 gaacgaa 140  Q
    |||||||    
T  33055818 gaacgaa 33055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 38621353 - 38621319
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  38621353 attgagttgtcgggaactctttctctcttctccct 38621319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 13894061 - 13894024
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  13894061 gagatgtttttgtactagatctaatatgtgaattactt 13894024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 27308210 - 27308271
Alignment:
Q  225 aatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaatta 285  Q
    |||||||||||| |||| |||| ||  ||||| ||||| |||||||||||||||||||||||    
T  27308210 aatatgatatattttggtactcaatttgagatgtttttgtactagatctaatatgtgaatta 27308271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 40232345 - 40232418
Alignment:
Q  39 gaattgaaaaatgtgaaattcccacatgagatggatcacaca-ctagtggtgtttatatagtgaggttgtacct 111  Q
    ||||||||||| ||| || ||||||||  |||||||||||||  |||| |||||||||||||| || |||||||    
T  40232345 gaattgaaaaaagtggaagtcccacatcggatggatcacacatttagtagtgtttatatagtgggggtgtacct 40232418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 2384625 - 2384689
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| |||||| | | ||  ||||||||||||||||| |||||    
T  2384625 aattacttgttcccaaagtttctcacctattagctctaaagcttctctataaatagagagctcac 2384689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 8267202 - 8267238
Alignment:
Q  252 agatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||||| |||||||||||||||| |||||||||    
T  8267202 agatatttttgtactagatctaatatgagaattactt 8267238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 431
Target Start/End: Original strand, 19798450 - 19798482
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctcc 431  Q
    |||||||||||| ||||||||||||||||||||    
T  19798450 attgagttgtcgggaactctttctctcttctcc 19798482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 40166609 - 40166577
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctcc 431  Q
    |||||||||||| ||||||||||||||||||||    
T  40166609 attgagttgtcgggaactctttctctcttctcc 40166577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 230 - 429
Target Start/End: Complemental strand, 42972905 - 42972707
Alignment:
Q  230 gatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattacttactccaaaagtaatatgtaattacttgttcctagagtttct 329  Q
    ||||||| |||| |||| || ||||||||||| |||| |||||||||||||||||||||| |   |||||||| |   ||| ||| |||| | |||||||    
T  42972905 gatatattttggtactcaattgagatatttttgtacttgatctaatatgtgaattacttaatgacaaagtaatgt---atttcttattcccaaagtttct 42972809  T
Q  330 cacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc--cagacacaagggttatattgagttgtcgagaactctttctctctt 427  Q
    ||| | ||||| |  ||||||||||||||||||| |  |||| ||||||||||  || ||| ||| ||| || ||||||||||| |||||||||||| ||    
T  42972808 cactttttagtgggaaattttctctataaatagatatttcacatagtgcattctacacacaaaagagttctagtgagttgtcgataactctttctctttt 42972709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 7002296 - 7002238
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatt 456  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||    
T  7002296 tattgagttgtcgagaactctttctctgttctccctccagcttatgttaacgtgttatt 7002238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 31449244 - 31449326
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  31449244 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 31449326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 384
Target Start/End: Original strand, 4237720 - 4237797
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 384  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  |||||||||||    
T  4237720 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattcca 4237797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 384
Target Start/End: Original strand, 4242459 - 4242536
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 384  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  |||||||||||    
T  4242459 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattcca 4242536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 17153262 - 17153198
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 362  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  17153262 taatatgtgaattacttgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17153198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 19393110 - 19393174
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  19393110 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagatctcac 19393174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 8330742 - 8330824
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||| ||||| ||||    
T  8330742 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccatacac 8330824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 4582675 - 4582732
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  4582675 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 4582732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 384
Target Start/End: Original strand, 43302063 - 43302140
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattcca 384  Q
    ||||||||| ||| | |||||||||| ||||| ||||||| |||||||||||||||||| |||||  |||||||||||    
T  43302063 aattacttgctcccaaagtttctcacttattacttgtgaactttctctataaatagagagctcacacagtgcattcca 43302140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 16066596 - 16066660
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| || | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  16066596 aattacttgtccccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcac 16066660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 22104390 - 22104326
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| |||||| |||||| |||||||||||||||||| |||||    
T  22104390 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcac 22104326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 17157431 - 17157486
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 362  Q
    |||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  17157431 aattacgtgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17157486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 10934018 - 10933948
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcga-gatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||||| |||| ||||||||| ||  | ||||||||| ||||||||||||||||||||||||||    
T  10934018 gtactcaatatgacatattttggcactcaatttaagatatttttgtactagatctaatatgtgaattactt 10933948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 18861966 - 18862024
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  18861966 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 18862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 21411737 - 21411663
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| || | |||||||||||||||||||| | ||||||||||    
T  21411737 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattc 21411663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 21806229 - 21806155
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| || | |||||||||||||||||||| | ||||||||||    
T  21806229 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattc 21806155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 4237657 - 4237738
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  4237657 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 4237738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 4242396 - 4242477
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  4242396 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 4242477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 8330335 - 8330408
Alignment:
Q  39 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 112  Q
    ||||||||||| |||||| ||||||||  ||||||||||||| |||| |||||||||||||  || ||||||||    
T  8330335 gaattgaaaaaagtgaaagtcccacatcggatggatcacacattagtagtgtttatatagtaggggtgtacctc 8330408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 21384458 - 21384385
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 381  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  ||||||||    
T  21384458 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcatt 21384385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 21387878 - 21387805
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcatt 381  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  ||||||||    
T  21387878 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcatt 21387805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 24672779 - 24672824
Alignment:
Q  402 gagttgtcgagaactctttctctcttctccctccagcttgtgttaa 447  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  24672779 gagttgtcgagaactatttctctcttctccctctagcttgtgttaa 24672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 31448785 - 31448897
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  31448785 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaacacacacattagtagtgtttatatagt 31448884  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  31448885 gggggtgtacctc 31448897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 445
Target Start/End: Complemental strand, 2966268 - 2966228
Alignment:
Q  405 ttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  2966268 ttgtcgagaattctttctctcttctccctccagcttgtgtt 2966228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 14036170 - 14036106
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||| ||||| | |||||||||||||||| | ||||||||| |||||||||||||| |||||    
T  14036170 aattactcgttcccaaagtttctcacatattaatcgtgaattttttctataaatagagagctcac 14036106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 371
Target Start/End: Complemental strand, 37772406 - 37772358
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  37772406 agtttctcacttattagttgtgaactttctctataaatagagagctcac 37772358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 17953422 - 17953457
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccct 433  Q
    ||||||||||||||||||||||||||||||||||||    
T  17953422 tattgagttgtcgagaactctttctctcttctccct 17953457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 23548066 - 23548129
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||||||| ||| |||||| ||||    
T  23548066 tattgagtggtcgagaactctttctatcttctctctccaacttgtgttgacgagctattcttct 23548129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 21827335 - 21827393
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||||| |||  ||||||||||||||||||||||  |||||||||    
T  21827335 gtttctcacttattagttgtaaatgatctctataaatagagaactcacacagtgcattc 21827393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 25367365 - 25367423
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    ||||||||| ||| | |||||||||| || |||||||||| ||||||||||||||||||    
T  25367365 aattacttgatcccaaagtttctcacttactagttgtgaactttctctataaatagaga 25367423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 445
Target Start/End: Complemental strand, 26779760 - 26779714
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccctccagcttgtgtt 445  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  26779760 attgagttgtcgataactctttctctcttctccatccggcttgtgtt 26779714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 34818085 - 34818143
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    ||||||||| ||| | |||||||||  ||||||||||||| ||||||||||||||||||    
T  34818085 aattacttgctccgaaagtttctcagttattagttgtgaactttctctataaatagaga 34818143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 4237262 - 4237373
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  4237262 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacacattagtagtgtttatatagt 4237360  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  4237361 gggggtgtacctc 4237373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 4242001 - 4242112
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  4242001 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacacattagtagtgtttatatagt 4242099  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  4242100 gggggtgtacctc 4242112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 28864009 - 28863964
Alignment:
Q  416 tctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||||    
T  28864009 tctttctctcttgtccctccagcttgtgttaacgagctattcttct 28863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 31449181 - 31449262
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||| ||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  31449181 gtactcgatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 31449262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 22104443 - 22104392
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 270  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  22104443 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 22104392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 449
Target Start/End: Original strand, 22714444 - 22714494
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacg 449  Q
    ||||||||||||||||||||||||  | || |||||||||||||||||||||    
T  22714444 tattgagttgtcgagaactctttcgttatt-tccctccagcttgtgttaacg 22714494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 25367293 - 25367372
Alignment:
Q  210 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 288  Q
    |||| ||| ||||||||||| |||||| |||  |||| ||  ||||||||||| |||||||||||||||| |||||||||    
T  25367293 atatattttgtactcaatattatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattactt 25367372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 15951002 - 15951036
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  15951002 attgagttgtcgggaactctttctctcttctccct 15951036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 33417176 - 33417142
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  33417176 attgagttgtcgggaactctttctctcttctccct 33417142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 38181692 - 38181726
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  38181692 attgagttgtcgggaactctttctctcttctccct 38181726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 40125345 - 40125379
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  40125345 attgagttgtcgggaactctttctctcttctccct 40125379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 43302002 - 43302081
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| ||||| |||||||||| ||||||||| |||| |||||    
T  43302002 gtactcaatatgatatattttg--actcaatttgagatatttttgtactaaatctaatatgagaattacttgctcccaaagt 43302081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 8330679 - 8330760
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||| ||||||| |||  |||| ||  ||||||||||| ||||| |||||||||| ||||||||| |||| |||||    
T  8330679 gtactcaataagatatattttgagactcaatttgagatatttttgtactatatctaatatgagaattacttgctcccaaagt 8330760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 17153283 - 17153246
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  17153283 gagatatttttgtactaaatctaatatgtgaattactt 17153246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 34818022 - 34818103
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||| ||||||| |||  |||| ||  ||||| ||||| |||||||||||||||| ||||||||| |||| |||||    
T  34818022 gtactcaataagatatattttgagactcaatttgagatgtttttgtactagatctaatatgagaattacttgctccgaaagt 34818103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 358
Target Start/End: Complemental strand, 10933964 - 10933904
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataa 358  Q
    |||||||| ||||||||||| | | ||||||||||||||||| |||| ||||| |||||||    
T  10933964 taatatgtgaattacttgttaccaaagtttctcacatattagctgtggattttttctataa 10933904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 15197331 - 15197295
Alignment:
Q  329 tcacatattagttgtgaattttctctataaatagaga 365  Q
    ||||||||||||||||||||| | |||||||||||||    
T  15197331 tcacatattagttgtgaatttacactataaatagaga 15197295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 430
Target Start/End: Complemental strand, 17794122 - 17794090
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctc 430  Q
    ||||||||| |||||||||||||||||||||||    
T  17794122 tattgagttatcgagaactctttctctcttctc 17794090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 19393057 - 19393105
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatacta 267  Q
    |||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  19393057 gtactcaatatgatatattttggtactcaattgagatatttttgtacta 19393105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 25361679 - 25361750
Alignment:
Q  39 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacct 111  Q
    ||||||||||| ||| || ||||||||  ||||||||||||| |||| || ||||||||||| || |||||||    
T  25361679 gaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtagtatttatatagtggggatgtacct 25361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 37772824 - 37772780
Alignment:
Q  68 gatggatcacacactagtggtgtttatatagtgaggttgtacctc 112  Q
    ||||||||||||| |||| |||||||||||||| || ||||||||    
T  37772824 gatggatcacacattagtagtgtttatatagtgggggtgtacctc 37772780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 51; Significance: 5e-20; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 9259 - 9341
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  9259 aattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 9341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 8802 - 8914
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  8802 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaaatcccacatcggatggaacacacacattagtagtgtttatatagt 8901  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  8902 gggggtgtacctc 8914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 9229 - 9277
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  9229 gagatatttttgtactagatctaatatgagaattacttgctcctaaagt 9277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 3726 - 3790
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  3726 aattacttgttcctaaagtttctcacctattagttgtgaagtttctctataaatagagagctcac 3790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 19601 - 19665
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  19601 aattacttgttcctaaagtttctcacttattagttgtgaagtttctctataaatagagagctcac 19665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 8e-19; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 3666637 - 3666553
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||| ||||||||||||  | |||||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||    
T  3666637 taatatgtgaattacttgttctcaaagtttctcacttattagttgtgaattttctctataaatagagagctcacgcagggcattc 3666553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 456
Target Start/End: Original strand, 1429584 - 1429697
Alignment:
Q  347 ttttctctataaatagagaactcacgtagtgcattccagacac--aagggttatattgagttgtcgagaactctttctc--tcttctccctccagcttgt 442  Q
    |||| |||||||||||||| ||||| |||||||||| | || |  ||| ||| ||| |||||||||| |||||||||||  |||||||||||||||||||    
T  1429584 ttttttctataaatagagagctcacatagtgcattctacacgccaaagagttctatcgagttgtcgataactctttctctctcttctccctccagcttgt 1429683  T
Q  443 gttaacgtgctatt 456  Q
    ||||||| ||||||    
T  1429684 gttaacgagctatt 1429697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 16115678 - 16115745
Alignment:
Q  394 gttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| | |||||||||    
T  16115678 gttatattgagttgttaagaactctttctctcatctccctccagcttgtgttaacgagttatttttct 16115745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 36936890 - 36936972
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  36936890 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 36936972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 36941644 - 36941726
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  36941644 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccatacac 36941726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 41997379 - 41997297
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  41997379 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 41997297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 42002148 - 42002066
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  42002148 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 42002066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 36949509 - 36949425
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||| ||||||||||||| | |||||||||| |||||||| |||||||| |||||||||||||| |||||  |||||||||    
T  36949509 taatatgtgaattacttgttcccaaagtttctcacttattagttatgaattttttctataaatagagagctcacacagtgcattc 36949425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 13300406 - 13300553
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || |||||||| |||||||||||||| |||| ||||||||||||||     
T  13300406 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcagatggatcacacattagtagtgtttatatagtgg 13300505  T
Q  102 ggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 144  Q
    || |||||||| |||     ||| | |||||||| |||||||||||||    
T  13300506 gggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 13300553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 557395 - 557329
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  557395 agtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 557329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 10754164 - 10754090
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  10754164 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 10754090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 13300869 - 13300951
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||  ||||| ||||| ||||    
T  13300869 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacac 13300951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 23976966 - 23977048
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||| ||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  23976966 aattacttgctcccaaagtttctcacttattagtagtgaactttctctataaatagagagctcacacagtgcattccatacac 23977048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 32460923 - 32461005
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||||| |||||||||| ||||||||||||| ||| |||||||||||||| |||||  | ||||||||| ||||    
T  32460923 aattacttgctcctaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacaatgcattccatacac 32461005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 2859941 - 2859994
Alignment:
Q  395 ttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaac 448  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  2859941 ttatattgagttgtcgaaaactttttctctcttctccctccaacttgtgttaac 2859994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 21826938 - 21826874
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| |||||| |||||| |||||||||||||||||| |||||    
T  21826938 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcac 21826874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 26869693 - 26869757
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| |||||| |||||| |||||||||||||||||| |||||    
T  26869693 aattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcac 26869757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 31732252 - 31732188
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  31732252 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 31732188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 21322957 - 21323104
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||||||||     
T  21322957 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacattagtagtgtttatatagtgg 21323056  T
Q  102 ggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 144  Q
    || |||||||| |||     ||| | |||||||| |||||||||||||    
T  21323057 gggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 21323104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 23757264 - 23757327
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| |||| ||| |||||| ||||    
T  23757264 tattgagttgtcgagaactctttttctcttctccctctagcttatgttgacgagctattcttct 23757327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 23822720 - 23822783
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| |||| ||| |||||| ||||    
T  23822720 tattgagttgtcgagaactctttttctcttctccctctagcttatgttgacgagctattcttct 23822783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 562167 - 562101
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||| || ||||||||||||| |||||||||||||||||| |||||  ||||||||||| ||||    
T  562167 agtttcttacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacac 562101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 562639 - 562530
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||||| |||| ||||||||||||||     
T  562639 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacattagtagtgtttatatagtgg 562541  T
Q  102 ggttgtacctc 112  Q
    || ||||||||    
T  562540 gggtgtacctc 562530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 36936827 - 36936908
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  36936827 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 36936908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 36941581 - 36941662
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  36941581 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 36941662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 36949562 - 36949493
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||  |||||| |||| |||| ||  |||||||||| ||||||||||||||||||||||||||    
T  36949562 gtactcaataaaatatattttggtactcaattaagatatttttgtactagatctaatatgtgaattactt 36949493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 15395235 - 15395283
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  15395235 agttactcacttattagttgtgaattttctctataaatagagagctcac 15395283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 21323371 - 21323419
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  21323371 agtttctcacttattagttgtgaactttctctataaatagagagctcac 21323419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 2848104 - 2848151
Alignment:
Q  401 tgagttgtcgagaactctttctctcttctccctccagcttgtgttaac 448  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  2848104 tgagttgtcgaaaactttttctctcttctccctccaacttgtgttaac 2848151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 15414346 - 15414394
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaac 448  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  15414346 tattcagttgtcgagaactct--ctctcttctccctccagcttgtgttaac 15414394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 32460863 - 32460941
Alignment:
Q  222 ctcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  32460863 ctcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcctaaagt 32460941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 557869 - 557758
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  557869 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacacattagtagtgtttatatagt 557771  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  557770 gggggtgtacctc 557758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 371
Target Start/End: Complemental strand, 8770931 - 8770894
Alignment:
Q  334 tattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||||||||||||||||||||||||| |||||    
T  8770931 tattagttgtgaattttctctataaatagagagctcac 8770894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 12044052 - 12044152
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| |||||| |||| |||  |||||| |||||||  |||| |||||||||||||    
T  12044052 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtgaaagtccctcatcggatggaacacacacattagtagtgtttatatagt 12044151  T
Q  100 g 100  Q
    |    
T  12044152 g 12044152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 41099245 - 41099188
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | ||||| |||| ||||||||| ||| |||||||||||||||||    
T  41099245 aattacttgttcccaaagtttatcacctattagttgggaagtttctctataaatagag 41099188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 41997442 - 41997361
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| || ||||||||||||| ||||||||| |||| |||||    
T  41997442 gtactcaatatgatatattttgagactcaatttgagatatttttgtattagatctaatatgagaattacttgctcccaaagt 41997361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 42002211 - 42002130
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| || ||||||||||||| ||||||||| |||| |||||    
T  42002211 gtactcaatatgatatattttgagactcaatttgagatatttttgtattagatctaatatgagaattacttgctcccaaagt 42002130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 12044509 - 12044573
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | ||||| |||| |||||||||||||||||||||| ||| ||||| |||||    
T  12044509 aattacttgctcccaaagtttttcacttattagttgtgaattttctctagaaaaagagagctcac 12044573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 31732282 - 31732234
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  31732282 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 31732234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 32460466 - 32460577
Alignment:
Q  3 cacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagtg 100  Q
    ||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || | ||||||  |||||| |||||||  |||| ||||||||||||||    
T  32460466 cacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtaccacatcggatggaacacacacattagtagtgtttatatagtg 32460565  T
Q  101 aggttgtacctc 112  Q
     || ||||||||    
T  32460566 ggggtgtacctc 32460577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 21826991 - 21826940
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 270  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  21826991 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 21826940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 299
Target Start/End: Original strand, 23976937 - 23976984
Alignment:
Q  252 agatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  23976937 agatatttttgtactagatctaatatgagaattacttgctcccaaagt 23976984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 26869640 - 26869691
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagat 270  Q
    |||||||||||||||||| |||| |||| || ||||||||||| ||||||||    
T  26869640 gtactcaatatgatatattttggtactcaattgagatatttttgtactagat 26869691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 376
Target Start/End: Complemental strand, 27425171 - 27425136
Alignment:
Q  341 tgtgaattttctctataaatagagaactcacgtagt 376  Q
    |||||||||||||| |||||||||||||||||||||    
T  27425171 tgtgaattttctctttaaatagagaactcacgtagt 27425136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 39519041 - 39519006
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccct 433  Q
    ||||||||||||| ||||||||||||||||||||||    
T  39519041 tattgagttgtcgggaactctttctctcttctccct 39519006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 3666655 - 3666621
Alignment:
Q  254 atatttttatactagatctaatatgtgaattactt 288  Q
    |||||||| ||||||||||||||||||||||||||    
T  3666655 atatttttgtactagatctaatatgtgaattactt 3666621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 4872546 - 4872512
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  4872546 attgagttgtcgggaactctttctctcttctccct 4872512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 24435503 - 24435569
Alignment:
Q  222 ctcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    |||||||| | |||| |||| |||| || ||||||||||| ||||||||||||||| ||| ||||||    
T  24435503 ctcaatataacatattttggtactcaattgagatatttttgtactagatctaatatatgagttactt 24435569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 41997816 - 41997719
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatata 97  Q
    |||||||||| || || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||    
T  41997816 acacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaacacacacattagtagtgtttatata 41997719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 42002607 - 42002498
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    ||||||||||  | || ||| |||| |||||||||  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| ||||||||||| |    
T  42002607 acacaaattcatatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccacatcggatggaacacacacattagtagtgtttatatatt 42002508  T
Q  100 gaggttgtac 109  Q
    |||| |||||    
T  42002507 gagggtgtac 42002498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 557473 - 557408
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaat 283  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||    
T  557473 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaat 557408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 562245 - 562180
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaat 283  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||    
T  562245 gtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaat 562180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 1429496 - 1429561
Alignment:
Q  223 tcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||| |||||| |||| |||| || ||||||||||| ||| |||||||| ||||| |||||||    
T  1429496 tcaatataatatattttggtactcaattgagatatttttgtaccagatctaacatgtgtattactt 1429561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 8771021 - 8770952
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||| |||||||||||| || | || | || || |||||||| |||||||||| |||||||||||||||    
T  8771021 gtacttaatatgatatatttttgtacacaattgaaatatttttgtactagatctgatatgtgaattactt 8770952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 382
Target Start/End: Original strand, 24435564 - 24435637
Alignment:
Q  309 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||||||| ||| | |||| ||||||| | ||| |||||||||||||||||| ||| |  |||||||||    
T  24435564 ttacttgttcctaaagtctttcacttattagtagagaactttctctataaatagagagctctcacagtgcattc 24435637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 31732687 - 31732615
Alignment:
Q  39 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacctc 112  Q
    |||||||||||  || || ||||||||  ||||||||||||| |||| |||||||||||||| || ||||||||    
T  31732687 gaattgaaaaaaatggaagtcccacatc-gatggatcacacattagtagtgtttatatagtgggggtgtacctc 31732615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 36941185 - 36941296
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacac--tagtggtgtttatatagt 99  Q
    |||||||||| || || ||| |||| ||||||| |  ||||||||||| ||| || ||||||||  |||||| |||||||  |||| |||||||||||||    
T  36941185 acacaaattcccatgttgggtagaactagtgttctgtgaattgaaaaa-gtggaagtcccacatcggatggaacacacacattagtagtgtttatatagt 36941283  T
Q  100 gaggttgtacctc 112  Q
    | || ||||||||    
T  36941284 gggggtgtacctc 36941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 23976422 - 23976466
Alignment:
Q  68 gatggatcacacactagtggtgtttatatagtgaggttgtacctc 112  Q
    ||||||||||||| ||||  |||||||||||||||| ||||||||    
T  23976422 gatggatcacacattagtaatgtttatatagtgagggtgtacctc 23976466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 24675 - 24739
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  24675 aattacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcac 24739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 24622 - 24670
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatacta 267  Q
    |||||||||||||||||| |||| |||| || ||||||||||| |||||    
T  24622 gtactcaatatgatatattttggtactcaattgagatatttttgtacta 24670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 49363 - 49427
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  49363 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcac 49427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 48895 - 48970
Alignment:
Q  19 gggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttat 94  Q
    |||||||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||    
T  48895 gggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacattagtagtgtttat 48970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 49333 - 49381
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||| |||||    
T  49333 gagatatttttgtactagatttaatatgagaattacttgctcccaaagt 49381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 30399 - 30335
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  30399 aattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcac 30335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 149271 - 149207
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  149271 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcac 149207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 149739 - 149664
Alignment:
Q  19 gggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttat 94  Q
    |||||||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| |||| ||||||||    
T  149739 gggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacattagtagtgtttat 149664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 149301 - 149253
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||| |||||    
T  149301 gagatatttttgtactagatttaatatgagaattacttgctcccaaagt 149253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 10356 - 10430
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  10356 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 10430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 10806 - 10880
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  10806 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 10880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 30982 - 30900
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||||| | | |||||||||| ||||||||||||| |||||||||||||||||| |||||  | ||||||| ||||||    
T  30982 aattacttgtttccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattcaagacac 30900  T

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Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 31965 - 32039
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  31965 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 32039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 7591 - 7517
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  7591 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 7517  T

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Target: scaffold0141 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 13392 - 13466
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  13392 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 13466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 21366 - 21440
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  21366 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 21440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 6)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 59141 - 59059
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| ||||| || ||| ||||| ||||    
T  59141 aattacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacataatgctttccatacac 59059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 365
Target Start/End: Complemental strand, 63343 - 63285
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagaga 365  Q
    ||||||||| ||| | |||||||||| ||||||||||||| ||||||||||||||||||    
T  63343 aattacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagaga 63285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 59213 - 59134
Alignment:
Q  210 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 288  Q
    |||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| |||||||||    
T  59213 atatattttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattactt 59134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 63415 - 63336
Alignment:
Q  210 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattactt 288  Q
    |||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| |||||||||    
T  63415 atatattttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattactt 63336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 59581 - 59472
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| ||||  |||||||||||||     
T  59581 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaaatcccacatcggatggatcacacattagtaatgtttatatagtgg 59483  T
Q  102 ggttgtacctc 112  Q
    || ||||||||    
T  59482 gggtgtacctc 59472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 63783 - 63674
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||||  ||||||||||||| ||||  |||||||||||||     
T  63783 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaa-gtggaaatcccacatcggatggatcacacattagtaatgtttatatagtgg 63685  T
Q  102 ggttgtacctc 112  Q
    || ||||||||    
T  63684 gggtgtacctc 63674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 121280 - 121206
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  121280 attacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 121206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 193646 - 193703
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||||||||||    
T  193646 aattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagag 193703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 187961 - 188014
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaata 361  Q
    ||||||||||||| | |||||||||| ||| ||||||||| ||||||||||||||    
T  187961 aattacttgttccaa-agtttctcacctatcagttgtgaagtttctctataaata 188014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 581 - 517
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| || | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  581 aattacttgtccccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcac 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0932 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 389
Target Start/End: Original strand, 1020 - 1100
Alignment:
Q  309 ttacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattccagacac 389  Q
    ||||||||||| | ||||||||||||||||||| ||| ||||||||||||||||  |  ||||||||| ||||||| ||||    
T  1020 ttacttgttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacgtagttcattccacacac 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 5921 - 5985
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 362  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||  ||||||||||||||||    
T  5921 taatatgtgaattacttgttccgaaagtttctcacatattagttgtgctttttctctataaatag 5985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 5900 - 5937
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  5900 gagatatttttgtactagatctaatatgtgaattactt 5937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 8311 - 8247
Alignment:
Q  299 taatatgt-aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatag 362  Q
    |||||||| ||||||||||||| | ||||||||||||||||||| ||| ||||||||||||||||    
T  8311 taatatgtgaattacttgttcccaaagtttctcacatattagttatgatttttctctataaatag 8247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 8332 - 8295
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  8332 gagatatttttgtactagatctaatatgtgaattactt 8295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 288
Target Start/End: Complemental strand, 2951 - 2917
Alignment:
Q  254 atatttttatactagatctaatatgtgaattactt 288  Q
    |||||||| ||||||||||||||||||||||||||    
T  2951 atatttttgtactagatctaatatgtgaattactt 2917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 5)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 47352 - 47416
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  47352 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 47416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 52296 - 52360
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||||||||| |||||    
T  52296 aattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcac 52360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 47322 - 47370
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  47322 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 47370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 52266 - 52314
Alignment:
Q  251 gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  52266 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 52314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 51832 - 51979
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| ||||||||||| ||  ||||||||||| ||| || || ||| |  ||||||||||||| |||| |||||||||||||      
T  51832 acacaaattcccacaatgggtagaattagtgtagtgtgaattgaaaaaagtggaagtcacacgtcggatggatcacacattagtagtgtttatatagtag 51931  T
Q  102 ggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 144  Q
    || |||||||| |||     ||| | |||||||| |||||||||||||    
T  51932 gggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 51979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 12348 - 12422
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  12348 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 12422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 14857 - 14931
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  14857 attacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 14931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 382
Target Start/End: Complemental strand, 1186 - 1128
Alignment:
Q  324 gtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||  |||||||||    
T  1186 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattc 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 395 - 461
Target Start/End: Complemental strand, 4620 - 4555
Alignment:
Q  395 ttatattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||||||| |||||||||||||||||||||| |||||| |||||||| ||| |||||| ||||    
T  4620 ttatattgagttttcgagaactctttctctcttct-cctccaacttgtgttgacgagctattcttct 4555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 547 - 637
Alignment:
Q  210 atatctttcgtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaagt 299  Q
    |||| ||| |||||||||||||||||| |||  |||| ||  ||||||||||| |||||||||||||||| ||||||||| |||| |||||    
T  547 atatattttgtactcaatatgatatattttgagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 64874 - 64818
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    |||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  64874 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagag 64818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 81272 - 81216
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagag 364  Q
    |||||||||||| | |||||||||| ||||||||| ||| |||||||||||||||||    
T  81272 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagag 81216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 461
Target Start/End: Complemental strand, 5874 - 5811
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccctccagcttgtgttaacgtgctatttttct 461  Q
    |||||||||||||| ||||||||||||||||||||| || |||||| | ||| |||||| ||||    
T  5874 tattgagttgtcgataactctttctctcttctccctgcatcttgtggtgacgagctattgttct 5811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 127102 - 127043
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  127102 agtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 127043  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 145871 - 145906
Alignment:
Q  398 tattgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||||| |||||||||||||||||||||    
T  145871 tattgagttgtcgataactctttctctcttctccct 145906  T

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Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 127180 - 127111
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatcgagatatttttatactagatctaatatgtgaattactt 288  Q
    ||||| ||||| |||||| ||||||||| || |||||||||   |||||||||||||| ||| |||||||    
T  127180 gtacttaatataatatattttggcactcaattgagatatttaagtactagatctaataggtgcattactt 127111  T

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Target: scaffold0628 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 7102 - 7028
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | ||||||| || |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  7102 attacttgtttccaaagtttctaacttattagttgtaaactatctctataaatagagaactcacacagtgcattc 7028  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Original strand, 35391 - 35465
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| |||||||||| ||   ||||||||||||||||||||||  |||||||||    
T  35391 attacttgtttccaaagtttctcacttattagttgtaaacaatctctataaatagagaactcacacagtgcattc 35465  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 22021 - 21947
Alignment:
Q  308 attacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||||| | | |||||||||| ||| |||||| || | ||||||||||||||||||||||  |||||||||    
T  22021 attacttgtttccaaagtttctcacttataagttgtaaactatctctataaatagagaactcacacagtgcattc 21947  T

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Target: scaffold0484 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 8051 - 7980
Alignment:
Q  39 gaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtgaggttgtacct 111  Q
    ||||||||||| ||| || ||||||||  ||||||||||||| ||||||| ||||||||||| || |||||||    
T  8051 gaattgaaaaa-gtggaagtcccacatcggatggatcacacattagtggtatttatatagtggggatgtacct 7980  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 35020 - 35100
Alignment:
Q  219 gtactcaatatgatatatcttggcactcgatc-gagatatttttatactagatctaatatgtgaattacttactccaaaag 298  Q
    |||||||||||||||||| |||  |||| ||  ||||||||||| ||||| |||||||||| ||||||||| |||| ||||    
T  35020 gtactcaatatgatatattttgagactcaatttgagatatttttgtactatatctaatatgagaattacttgctcccaaag 35100  T

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Target: scaffold0041; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 35083 - 35147
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    ||||||||| ||| | || || |||| ||||||||||||| |||||||||||||||||| |||||    
T  35083 aattacttgctcccaaagcttgtcacttattagttgtgaactttctctataaatagagagctcac 35147  T

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Target: scaffold0041; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 34641 - 34788
Alignment:
Q  2 acacaaattctcacgtagggaagaattagtgttgtccgaattgaaaaatgtgaaattcccacatgagatggatcacacactagtggtgtttatatagtga 101  Q
    |||||||||| |||   ||| |||| |||||| ||  ||||||||||| ||| || ||||||||   |||||||||||| || | ||||||||||||||     
T  34641 acacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcgtatggatcacacattaatagtgtttatatagtgg 34740  T
Q  102 ggttgtacctcaaat-----gggatgcataattaagtgaacgaagtaa 144  Q
    || |||||||| |||     ||| | |||||||| |||||||||||||    
T  34741 gggtgtacctctaattaatgggggtacataattatgtgaacgaagtaa 34788  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 199905 - 199841
Alignment:
Q  307 aattacttgttcctagagtttctcacatattagttgtgaattttctctataaatagagaactcac 371  Q
    |||||||||| || |  ||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  199905 aattacttgtccccaatgtttctcacctattagttgcgaagtttctctataaatagagagctcac 199841  T

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Target: scaffold0292 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 7866 - 7807
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcattc 382  Q
    |||||||| | |||||||||| || | ||||||||||||||||||||||  |||||||||    
T  7866 agtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattc 7807  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 4709 - 4675
Alignment:
Q  399 attgagttgtcgagaactctttctctcttctccct 433  Q
    |||||||||||| ||||||||||||||||||||||    
T  4709 attgagttgtcgggaactctttctctcttctccct 4675  T

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Target: scaffold0575 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 5276 - 5333
Alignment:
Q  323 agtttctcacatattagttgtgaattttctctataaatagagaactcacgtagtgcat 380  Q
    |||||||||| |||||||||| || | || |||||||||||||||||||  |||||||    
T  5276 agtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcat 5333  T

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