View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16697_high_1 (Length: 881)

Name: NF16697_high_1
Description: NF16697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16697_high_1
NF16697_high_1
[»] chr2 (50 HSPs)
chr2 (4-869)||(30411040-30411903)
chr2 (625-859)||(27908992-27909237)
chr2 (649-858)||(17349362-17349573)
chr2 (629-855)||(17743354-17743590)
chr2 (669-858)||(29142986-29143174)
chr2 (669-860)||(25530472-25530662)
chr2 (629-858)||(28925507-28925746)
chr2 (669-869)||(26603223-26603424)
chr2 (669-860)||(25535299-25535488)
chr2 (645-858)||(29719106-29719329)
chr2 (681-858)||(25920303-25920478)
chr2 (629-869)||(17675491-17675744)
chr2 (629-869)||(17635637-17635889)
chr2 (645-858)||(15339239-15339463)
chr2 (669-858)||(24090813-24091000)
chr2 (669-859)||(25618581-25618781)
chr2 (670-840)||(31804791-31804973)
chr2 (656-852)||(25196022-25196229)
chr2 (681-858)||(17197906-17198081)
chr2 (646-744)||(45621880-45621978)
chr2 (771-859)||(25887777-25887864)
chr2 (771-866)||(23933412-23933505)
chr2 (646-728)||(20174650-20174732)
chr2 (771-844)||(32085602-32085673)
chr2 (645-744)||(12953293-12953392)
chr2 (786-851)||(12953225-12953290)
chr2 (669-858)||(26667342-26667519)
chr2 (629-725)||(32085448-32085544)
chr2 (771-866)||(45553268-45553360)
chr2 (671-744)||(9774334-9774405)
chr2 (649-743)||(25885460-25885553)
chr2 (645-742)||(8503071-8503168)
chr2 (645-726)||(19200152-19200232)
chr2 (645-742)||(23011764-23011860)
chr2 (645-743)||(25888224-25888318)
chr2 (644-744)||(11382752-11382852)
chr2 (771-831)||(13776476-13776536)
chr2 (645-728)||(45553131-45553214)
chr2 (629-726)||(13776324-13776420)
chr2 (629-742)||(17889922-17890034)
chr2 (770-859)||(17890075-17890162)
chr2 (771-831)||(11382654-11382713)
chr2 (648-728)||(28770458-28770538)
chr2 (684-742)||(21078627-21078685)
chr2 (669-743)||(27418391-27418465)
chr2 (645-714)||(8447079-8447147)
chr2 (629-716)||(12557736-12557823)
chr2 (775-814)||(45621799-45621838)
chr2 (681-742)||(5777253-5777314)
chr2 (682-743)||(28606178-28606239)
[»] chr1 (65 HSPs)
chr1 (645-869)||(21449090-21449314)
chr1 (629-858)||(18736126-18736354)
chr1 (629-859)||(17610129-17610370)
chr1 (629-845)||(29242504-29242718)
chr1 (635-846)||(21987880-21988090)
chr1 (629-860)||(15543839-15544080)
chr1 (629-859)||(12208586-12208827)
chr1 (669-858)||(16916820-16917008)
chr1 (640-846)||(25405517-25405733)
chr1 (669-858)||(727492-727680)
chr1 (669-854)||(16069440-16069625)
chr1 (669-858)||(18825680-18825868)
chr1 (647-846)||(16179010-16179219)
chr1 (669-855)||(24054004-24054188)
chr1 (669-857)||(18830506-18830693)
chr1 (669-858)||(23179822-23180009)
chr1 (669-858)||(14781740-14781927)
chr1 (647-858)||(9401511-9401730)
chr1 (669-858)||(21666483-21666682)
chr1 (629-764)||(14779550-14779684)
chr1 (645-858)||(17359163-17359386)
chr1 (646-846)||(31235935-31236145)
chr1 (771-858)||(18100888-18100973)
chr1 (645-742)||(13345337-13345434)
chr1 (669-859)||(21334591-21334793)
chr1 (771-858)||(22623029-22623115)
chr1 (631-742)||(24306307-24306417)
chr1 (669-744)||(51473875-51473950)
chr1 (629-742)||(3591654-3591767)
chr1 (669-745)||(16787724-16787800)
chr1 (773-860)||(21973077-21973164)
chr1 (645-743)||(23038012-23038109)
chr1 (629-742)||(17837502-17837615)
chr1 (771-844)||(22664346-22664417)
chr1 (771-855)||(17121378-17121460)
chr1 (629-741)||(27117720-27117832)
chr1 (771-855)||(28008244-28008326)
chr1 (774-845)||(18529079-18529149)
chr1 (645-728)||(21847635-21847717)
chr1 (787-846)||(25403977-25404036)
chr1 (771-858)||(32382883-32382968)
chr1 (649-743)||(24281282-24281376)
chr1 (771-858)||(15807895-15807980)
chr1 (771-842)||(9787769-9787839)
chr1 (629-743)||(15813155-15813268)
chr1 (649-743)||(22664211-22664305)
chr1 (629-723)||(44795354-44795447)
chr1 (645-726)||(9787896-9787977)
chr1 (771-860)||(12012686-12012773)
chr1 (774-859)||(23037884-23037969)
chr1 (669-744)||(22620287-22620362)
chr1 (669-744)||(22622915-22622990)
chr1 (775-846)||(33190820-33190889)
chr1 (669-743)||(24214569-24214643)
chr1 (629-742)||(26540880-26540993)
chr1 (822-859)||(13345211-13345248)
chr1 (769-834)||(14779702-14779766)
chr1 (812-860)||(15813415-15813463)
chr1 (643-743)||(26648971-26649070)
chr1 (771-834)||(16360010-16360071)
chr1 (813-860)||(25961038-25961085)
chr1 (669-743)||(147656-147730)
chr1 (671-744)||(15813523-15813597)
chr1 (629-743)||(33190662-33190776)
chr1 (645-694)||(32383047-32383096)
[»] chr4 (64 HSPs)
chr4 (629-859)||(19492585-19492814)
chr4 (629-860)||(13908839-13909081)
chr4 (629-860)||(15164752-15164992)
chr4 (645-856)||(13692557-13692767)
chr4 (628-858)||(7582281-7582522)
chr4 (681-858)||(17026218-17026394)
chr4 (629-869)||(17216802-17217058)
chr4 (629-816)||(16730316-16730513)
chr4 (645-858)||(19562049-19562276)
chr4 (645-858)||(17709758-17709978)
chr4 (669-860)||(17337007-17337209)
chr4 (629-742)||(19882625-19882738)
chr4 (669-856)||(25097859-25098044)
chr4 (645-837)||(13128768-13128972)
chr4 (645-742)||(20315001-20315098)
chr4 (629-745)||(21323873-21323989)
chr4 (766-866)||(25121093-25121191)
chr4 (681-858)||(12406577-12406753)
chr4 (778-857)||(24639336-24639415)
chr4 (669-858)||(25094592-25094779)
chr4 (669-743)||(11490557-11490631)
chr4 (645-743)||(12578266-12578364)
chr4 (627-743)||(17671985-17672101)
chr4 (774-869)||(14649036-14649130)
chr4 (643-743)||(5679204-5679304)
chr4 (771-866)||(26115772-26115865)
chr4 (774-869)||(40227917-40228011)
chr4 (629-733)||(9737514-9737623)
chr4 (669-730)||(24639467-24639528)
chr4 (629-742)||(25121227-25121339)
chr4 (628-716)||(14648879-14648966)
chr4 (771-846)||(17672141-17672214)
chr4 (646-728)||(13992891-13992973)
chr4 (774-828)||(19929579-19929632)
chr4 (645-719)||(19929699-19929773)
chr4 (771-840)||(17951189-17951256)
chr4 (643-743)||(8969722-8969821)
chr4 (646-726)||(15047130-15047210)
chr4 (646-726)||(15107214-15107294)
chr4 (771-859)||(22357405-22357492)
chr4 (624-743)||(9052654-9052772)
chr4 (669-728)||(19636601-19636660)
chr4 (629-719)||(17951320-17951410)
chr4 (771-837)||(17955044-17955108)
chr4 (629-719)||(17955172-17955262)
chr4 (645-743)||(20829739-20829836)
chr4 (645-735)||(22175970-22176060)
chr4 (669-726)||(19092320-19092377)
chr4 (629-742)||(23080326-23080439)
chr4 (646-742)||(19374814-19374909)
chr4 (670-742)||(22526390-22526462)
chr4 (771-814)||(9264923-9264966)
chr4 (656-743)||(11933431-11933517)
chr4 (670-716)||(11521218-11521264)
chr4 (669-714)||(10589737-10589781)
chr4 (629-730)||(11700583-11700683)
chr4 (813-858)||(11935237-11935282)
chr4 (774-831)||(20829640-20829696)
chr4 (646-716)||(22357559-22357632)
chr4 (774-804)||(12578193-12578223)
chr4 (771-804)||(5679344-5679377)
chr4 (628-716)||(11093947-11094036)
chr4 (631-692)||(12318420-12318481)
chr4 (771-844)||(19092434-19092505)
[»] chr8 (49 HSPs)
chr8 (629-869)||(17101768-17102007)
chr8 (645-869)||(29382224-29382459)
chr8 (645-859)||(24114157-24114380)
chr8 (669-840)||(27659470-27659642)
chr8 (645-859)||(24269599-24269822)
chr8 (669-857)||(23893089-23893275)
chr8 (684-858)||(16403952-16404125)
chr8 (639-860)||(25226131-25226362)
chr8 (669-858)||(19264067-19264256)
chr8 (646-858)||(13314866-13315089)
chr8 (646-846)||(18448428-18448639)
chr8 (685-855)||(18569107-18569276)
chr8 (778-859)||(24110543-24110623)
chr8 (786-869)||(26394562-26394644)
chr8 (629-743)||(30806492-30806611)
chr8 (771-858)||(44010898-44010984)
chr8 (649-742)||(14075599-14075692)
chr8 (627-743)||(14528132-14528248)
chr8 (771-875)||(21314761-21314865)
chr8 (771-859)||(25182301-25182388)
chr8 (632-743)||(6884946-6885056)
chr8 (645-728)||(24904634-24904717)
chr8 (669-743)||(2637623-2637697)
chr8 (629-727)||(5850926-5851024)
chr8 (629-726)||(19786716-19786813)
chr8 (770-846)||(14626166-14626242)
chr8 (669-836)||(17509271-17509447)
chr8 (669-744)||(21314648-21314723)
chr8 (645-711)||(26008024-26008090)
chr8 (625-741)||(15238780-15238896)
chr8 (655-727)||(34497126-34497198)
chr8 (628-743)||(25182428-25182543)
chr8 (771-866)||(34497255-34497348)
chr8 (771-860)||(7983720-7983807)
chr8 (771-860)||(13697994-13698080)
chr8 (682-743)||(13697893-13697954)
chr8 (771-840)||(14528288-14528355)
chr8 (775-828)||(19786874-19786926)
chr8 (650-719)||(44011048-44011116)
chr8 (624-719)||(17976599-17976694)
chr8 (649-712)||(30783772-30783835)
chr8 (772-866)||(9642018-9642110)
chr8 (777-835)||(24644984-24645042)
chr8 (771-841)||(30122046-30122114)
chr8 (645-726)||(24110672-24110753)
chr8 (669-742)||(30122156-30122228)
chr8 (771-831)||(6885096-6885155)
chr8 (646-716)||(31288360-31288429)
chr8 (645-698)||(5052966-5053019)
[»] chr7 (100 HSPs)
chr7 (656-858)||(11803092-11803293)
chr7 (669-858)||(16058907-16059096)
chr7 (669-860)||(1848100-1848301)
chr7 (633-856)||(13418523-13418744)
chr7 (628-846)||(8978892-8979121)
chr7 (661-855)||(39273053-39273257)
chr7 (669-846)||(3329543-3329732)
chr7 (643-858)||(6042460-6042675)
chr7 (670-843)||(17077154-17077325)
chr7 (645-869)||(2563819-2564054)
chr7 (669-858)||(4449005-4449192)
chr7 (630-765)||(13759838-13759973)
chr7 (669-858)||(13277528-13277716)
chr7 (774-869)||(5108706-5108801)
chr7 (639-857)||(20582254-20582479)
chr7 (645-858)||(8053937-8054156)
chr7 (645-768)||(8054465-8054587)
chr7 (645-744)||(11221163-11221262)
chr7 (645-862)||(18368849-18369078)
chr7 (629-743)||(31492915-31493029)
chr7 (625-742)||(9864327-9864444)
chr7 (669-846)||(17191100-17191276)
chr7 (645-726)||(10587041-10587122)
chr7 (669-857)||(13289294-13289482)
chr7 (777-857)||(4785985-4786064)
chr7 (771-859)||(9131049-9131136)
chr7 (771-854)||(7397280-7397362)
chr7 (645-744)||(9731626-9731725)
chr7 (629-855)||(16365690-16365927)
chr7 (771-860)||(18662579-18662666)
chr7 (629-725)||(7318258-7318354)
chr7 (669-832)||(7492163-7492337)
chr7 (771-858)||(8877559-8877646)
chr7 (627-742)||(16306677-16306792)
chr7 (776-859)||(17153027-17153109)
chr7 (645-728)||(23099967-23100050)
chr7 (646-743)||(3734598-3734695)
chr7 (629-742)||(18495358-18495471)
chr7 (673-742)||(18662470-18662539)
chr7 (650-726)||(8313412-8313488)
chr7 (645-728)||(5108567-5108649)
chr7 (771-858)||(10586898-10586984)
chr7 (771-842)||(16297724-16297794)
chr7 (624-743)||(17153154-17153273)
chr7 (629-743)||(1584530-1584642)
chr7 (628-742)||(5530005-5530119)
chr7 (669-745)||(17203049-17203124)
chr7 (669-744)||(4785861-4785936)
chr7 (669-744)||(4818861-4818936)
chr7 (645-724)||(9574408-9574487)
chr7 (771-859)||(19153434-19153522)
chr7 (771-859)||(20752833-20752921)
chr7 (771-860)||(7318412-7318501)
chr7 (771-857)||(9731502-9731587)
chr7 (629-742)||(9916550-9916664)
chr7 (629-742)||(9924462-9924576)
chr7 (771-844)||(3734735-3734806)
chr7 (645-742)||(4579099-4579195)
chr7 (645-742)||(9500445-9500542)
chr7 (775-860)||(17829712-17829795)
chr7 (669-742)||(18467476-18467549)
chr7 (670-742)||(18466031-18466103)
chr7 (669-844)||(22067128-22067300)
chr7 (643-742)||(10584487-10584586)
chr7 (645-716)||(10937603-10937674)
chr7 (645-728)||(16297835-16297918)
chr7 (629-743)||(1587666-1587780)
chr7 (645-723)||(2350767-2350845)
chr7 (629-742)||(18449226-18449340)
chr7 (771-860)||(8313265-8313352)
chr7 (771-860)||(14195845-14195932)
chr7 (629-726)||(14755147-14755244)
chr7 (673-742)||(22339312-22339381)
chr7 (772-853)||(31493066-31493145)
chr7 (788-857)||(4818995-4819065)
chr7 (643-719)||(4986554-4986630)
chr7 (643-719)||(4990652-4990728)
chr7 (628-744)||(12329666-12329782)
chr7 (670-742)||(21230338-21230410)
chr7 (669-728)||(3191074-3191133)
chr7 (778-853)||(6006084-6006157)
chr7 (775-846)||(8293928-8293997)
chr7 (771-826)||(10648717-10648770)
chr7 (669-743)||(12181633-12181708)
chr7 (643-714)||(15303650-15303720)
chr7 (645-716)||(23093311-23093381)
chr7 (771-857)||(140255-140339)
chr7 (771-838)||(1587821-1587884)
chr7 (645-743)||(6013594-6013692)
chr7 (645-743)||(15869596-15869694)
chr7 (670-716)||(21912507-21912553)
chr7 (629-742)||(5797496-5797609)
chr7 (778-859)||(15869740-15869820)
chr7 (649-698)||(21227184-21227233)
chr7 (655-743)||(10648589-10648677)
chr7 (669-728)||(8877446-8877505)
chr7 (643-714)||(20174571-20174641)
chr7 (777-841)||(6013739-6013800)
chr7 (646-715)||(7397198-7397266)
chr7 (645-742)||(14195974-14196070)
[»] chr6 (72 HSPs)
chr6 (629-869)||(23844327-23844579)
chr6 (639-858)||(25781790-25782002)
chr6 (645-856)||(27737565-27737787)
chr6 (669-858)||(24657343-24657529)
chr6 (649-855)||(5624645-5624862)
chr6 (680-858)||(11135943-11136122)
chr6 (627-869)||(17826959-17827208)
chr6 (630-768)||(9516771-9516908)
chr6 (669-854)||(22412940-22413123)
chr6 (669-858)||(21841574-21841762)
chr6 (673-858)||(23009282-23009464)
chr6 (673-858)||(23778900-23779082)
chr6 (629-742)||(9726007-9726120)
chr6 (629-858)||(27124369-27124606)
chr6 (669-846)||(22813607-22813783)
chr6 (669-858)||(23231859-23232057)
chr6 (771-858)||(20005792-20005879)
chr6 (628-723)||(20005899-20005994)
chr6 (777-869)||(14637012-14637104)
chr6 (649-745)||(23645765-23645861)
chr6 (771-858)||(20144996-20145083)
chr6 (771-858)||(22187756-22187843)
chr6 (669-826)||(22410234-22410401)
chr6 (645-728)||(23143723-23143806)
chr6 (778-840)||(17382214-17382275)
chr6 (768-869)||(24475191-24475292)
chr6 (770-859)||(14079331-14079420)
chr6 (771-878)||(12183185-12183290)
chr6 (655-742)||(17299832-17299919)
chr6 (646-733)||(17729154-17729241)
chr6 (645-728)||(21679866-21679949)
chr6 (645-743)||(12183331-12183429)
chr6 (629-723)||(21907417-21907511)
chr6 (670-743)||(28933660-28933733)
chr6 (629-741)||(25927305-25927417)
chr6 (645-728)||(21672450-21672533)
chr6 (645-743)||(15466371-15466468)
chr6 (646-727)||(18075404-18075485)
chr6 (646-743)||(21688795-21688892)
chr6 (766-855)||(22566039-22566127)
chr6 (771-856)||(23645644-23645727)
chr6 (771-859)||(28933534-28933620)
chr6 (780-855)||(1635110-1635183)
chr6 (775-860)||(9838499-9838582)
chr6 (630-715)||(17382131-17382216)
chr6 (669-726)||(19244610-19244667)
chr6 (771-860)||(8241414-8241499)
chr6 (629-743)||(11176935-11177049)
chr6 (629-743)||(22567825-22567939)
chr6 (670-743)||(4339761-4339834)
chr6 (771-842)||(15466509-15466577)
chr6 (669-742)||(22566163-22566236)
chr6 (669-741)||(7542962-7543034)
chr6 (629-716)||(28586057-28586145)
chr6 (645-728)||(8241278-8241359)
chr6 (649-748)||(17883780-17883878)
chr6 (775-858)||(21907577-21907659)
chr6 (669-743)||(9838381-9838455)
chr6 (803-869)||(17883705-17883771)
chr6 (775-832)||(24252131-24252186)
chr6 (628-743)||(9898958-9899074)
chr6 (700-764)||(14636923-14636987)
chr6 (685-745)||(24252227-24252287)
chr6 (645-696)||(14079491-14079542)
chr6 (771-846)||(25927192-25927265)
chr6 (768-846)||(9516921-9516998)
chr6 (812-846)||(18075297-18075331)
chr6 (645-695)||(21932100-21932150)
chr6 (669-739)||(24251541-24251611)
chr6 (771-844)||(11177089-11177161)
chr6 (771-844)||(21672323-21672394)
chr6 (771-844)||(21679739-21679810)
[»] chr5 (50 HSPs)
chr5 (627-869)||(15375758-15375999)
chr5 (629-854)||(17431868-17432103)
chr5 (669-855)||(20563969-20564155)
chr5 (632-869)||(24245407-24245655)
chr5 (669-858)||(23388724-23388912)
chr5 (669-858)||(28664799-28664986)
chr5 (637-806)||(19004153-19004332)
chr5 (669-857)||(20858710-20858896)
chr5 (681-858)||(16523677-16523852)
chr5 (656-857)||(20315305-20315517)
chr5 (669-858)||(17314987-17315174)
chr5 (712-869)||(20744532-20744699)
chr5 (656-856)||(24140454-24140658)
chr5 (681-858)||(20549592-20549766)
chr5 (629-860)||(34128622-34128862)
chr5 (643-728)||(17185462-17185547)
chr5 (629-728)||(18208264-18208362)
chr5 (645-728)||(25550519-25550602)
chr5 (629-743)||(18937733-18937846)
chr5 (646-743)||(17171553-17171650)
chr5 (641-855)||(39434460-39434676)
chr5 (629-728)||(22755506-22755605)
chr5 (629-743)||(19283855-19283969)
chr5 (627-728)||(15469919-15470020)
chr5 (774-831)||(18937889-18937945)
chr5 (644-745)||(36175134-36175234)
chr5 (779-857)||(26835796-26835872)
chr5 (670-744)||(15690803-15690877)
chr5 (645-743)||(24266955-24267052)
chr5 (645-743)||(24343586-24343683)
chr5 (646-743)||(34487640-34487736)
chr5 (675-743)||(25402337-25402405)
chr5 (775-859)||(26121197-26121280)
chr5 (646-765)||(19051551-19051669)
chr5 (628-742)||(24852173-24852287)
chr5 (771-860)||(15690916-15691002)
chr5 (768-860)||(18208123-18208212)
chr5 (771-844)||(24265364-24265435)
chr5 (771-844)||(24341995-24342066)
chr5 (771-855)||(36175272-36175354)
chr5 (629-688)||(20744866-20744925)
chr5 (771-846)||(24260655-24260728)
chr5 (646-745)||(26120867-26120965)
chr5 (771-829)||(34487777-34487832)
chr5 (646-727)||(24167600-24167681)
chr5 (628-692)||(19086230-19086294)
chr5 (629-744)||(26121323-26121437)
chr5 (774-804)||(22755664-22755694)
chr5 (688-745)||(24260560-24260617)
chr5 (771-860)||(25402209-25402297)
[»] scaffold0056 (2 HSPs)
scaffold0056 (669-857)||(21301-21488)
scaffold0056 (673-858)||(25015-25199)
[»] chr3 (61 HSPs)
chr3 (669-855)||(16229831-16230016)
chr3 (645-863)||(21301919-21302149)
chr3 (669-858)||(8770044-8770232)
chr3 (670-858)||(8765143-8765330)
chr3 (674-858)||(12754797-12754981)
chr3 (672-858)||(17438305-17438502)
chr3 (629-857)||(19908292-19908531)
chr3 (645-857)||(22349410-22349615)
chr3 (629-859)||(12411136-12411373)
chr3 (656-854)||(932754-932963)
chr3 (669-858)||(20023427-20023615)
chr3 (669-851)||(27413778-27413957)
chr3 (683-858)||(19909847-19910020)
chr3 (656-858)||(4650243-4650450)
chr3 (629-743)||(12805890-12806004)
chr3 (669-858)||(8169910-8170096)
chr3 (643-869)||(16245593-16245829)
chr3 (686-846)||(19576107-19576265)
chr3 (771-859)||(21303228-21303314)
chr3 (669-846)||(19925508-19925697)
chr3 (685-857)||(19167452-19167620)
chr3 (645-869)||(41508368-41508602)
chr3 (669-765)||(8889130-8889226)
chr3 (669-775)||(19171803-19171908)
chr3 (628-742)||(31286017-31286129)
chr3 (761-858)||(8882997-8883094)
chr3 (645-743)||(3116419-3116516)
chr3 (669-742)||(8557130-8557203)
chr3 (629-843)||(20429695-20429920)
chr3 (771-857)||(12805766-12805850)
chr3 (645-743)||(21325341-21325439)
chr3 (645-726)||(10744903-10744984)
chr3 (775-860)||(5508477-5508562)
chr3 (645-725)||(10917919-10917999)
chr3 (643-743)||(18736672-18736771)
chr3 (771-869)||(2167481-2167577)
chr3 (655-728)||(821529-821602)
chr3 (643-728)||(2167632-2167716)
chr3 (771-860)||(10745040-10745127)
chr3 (643-716)||(12759386-12759459)
chr3 (771-858)||(17155931-17156015)
chr3 (669-738)||(28728969-28729038)
chr3 (771-831)||(3116321-3116380)
chr3 (646-742)||(21825870-21825965)
chr3 (771-858)||(21325480-21325565)
chr3 (645-743)||(5508337-5508434)
chr3 (645-743)||(21303354-21303452)
chr3 (802-858)||(7494989-7495045)
chr3 (656-728)||(8319051-8319123)
chr3 (775-841)||(2723727-2723790)
chr3 (771-866)||(8445960-8446053)
chr3 (775-846)||(18736559-18736628)
chr3 (628-718)||(6289887-6289977)
chr3 (646-716)||(13908253-13908322)
chr3 (771-832)||(21825770-21825829)
chr3 (643-698)||(18458469-18458524)
chr3 (800-855)||(19171744-19171799)
chr3 (785-859)||(8143767-8143838)
chr3 (669-723)||(8445848-8445901)
chr3 (647-725)||(10923150-10923228)
chr3 (687-744)||(7495094-7495151)
[»] scaffold0638 (1 HSPs)
scaffold0638 (669-858)||(696-897)
[»] scaffold0035 (1 HSPs)
scaffold0035 (645-846)||(69914-70125)
[»] scaffold0671 (1 HSPs)
scaffold0671 (684-858)||(482-655)
[»] scaffold0016 (1 HSPs)
scaffold0016 (669-858)||(3556-3744)
[»] scaffold0034 (1 HSPs)
scaffold0034 (669-858)||(76442-76629)
[»] scaffold0386 (2 HSPs)
scaffold0386 (682-858)||(6589-6764)
scaffold0386 (738-858)||(5979-6098)
[»] scaffold0054 (1 HSPs)
scaffold0054 (771-858)||(72148-72235)
[»] scaffold0622 (2 HSPs)
scaffold0622 (645-727)||(729-811)
scaffold0622 (774-860)||(871-954)
[»] scaffold1869 (1 HSPs)
scaffold1869 (669-858)||(263-463)
[»] scaffold0008 (4 HSPs)
scaffold0008 (669-793)||(234366-234490)
scaffold0008 (629-768)||(48169-48304)
scaffold0008 (629-743)||(54845-54960)
scaffold0008 (774-869)||(55003-55097)
[»] scaffold0263 (1 HSPs)
scaffold0263 (771-858)||(15785-15871)
[»] scaffold0155 (1 HSPs)
scaffold0155 (650-869)||(35857-36088)
[»] scaffold0024 (2 HSPs)
scaffold0024 (771-859)||(39724-39810)
scaffold0024 (645-723)||(39585-39663)
[»] scaffold0957 (1 HSPs)
scaffold0957 (645-859)||(3154-3370)
[»] scaffold0005 (2 HSPs)
scaffold0005 (774-869)||(168162-168256)
scaffold0005 (628-716)||(168326-168413)
[»] scaffold0111 (1 HSPs)
scaffold0111 (770-860)||(3771-3861)
[»] scaffold0001 (3 HSPs)
scaffold0001 (771-846)||(69218-69293)
scaffold0001 (669-744)||(69106-69181)
scaffold0001 (645-728)||(81488-81570)
[»] scaffold0062 (2 HSPs)
scaffold0062 (771-869)||(43090-43187)
scaffold0062 (669-725)||(43245-43301)
[»] scaffold0650 (1 HSPs)
scaffold0650 (645-742)||(6288-6385)
[»] scaffold0941 (1 HSPs)
scaffold0941 (309-393)||(1518-1606)
[»] scaffold0838 (1 HSPs)
scaffold0838 (645-743)||(2371-2469)
[»] scaffold0832 (1 HSPs)
scaffold0832 (645-743)||(2402-2500)
[»] scaffold0102 (2 HSPs)
scaffold0102 (669-743)||(35562-35636)
scaffold0102 (771-858)||(35677-35762)
[»] scaffold0043 (2 HSPs)
scaffold0043 (629-743)||(89854-89967)
scaffold0043 (775-844)||(89742-89809)
[»] scaffold0019 (2 HSPs)
scaffold0019 (670-742)||(11266-11338)
scaffold0019 (644-723)||(181726-181804)
[»] scaffold0136 (1 HSPs)
scaffold0136 (628-714)||(15494-15580)
[»] scaffold0002 (1 HSPs)
scaffold0002 (775-844)||(114631-114699)
[»] scaffold0351 (1 HSPs)
scaffold0351 (771-855)||(5641-5724)
[»] scaffold0672 (1 HSPs)
scaffold0672 (669-728)||(1759-1818)
[»] scaffold0427 (1 HSPs)
scaffold0427 (680-743)||(2818-2881)
[»] scaffold0042 (1 HSPs)
scaffold0042 (646-744)||(29909-30006)
[»] scaffold0090 (1 HSPs)
scaffold0090 (669-728)||(7427-7486)
[»] scaffold0098 (1 HSPs)
scaffold0098 (309-393)||(36512-36600)


Alignment Details
Target: chr2 (Bit Score: 795; Significance: 0; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 795; E-Value: 0
Query Start/End: Original strand, 4 - 869
Target Start/End: Original strand, 30411040 - 30411903
Alignment:
Q  4 caagcagtcctgcaacaagatatctagttcttaaaagagtcatggtccaaccttgttgagatggagccaatgatggtgactttgaacaagatctcaatgc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30411040 caagcagtcctgcaacaagatatctagttcttaaaagagtcatggtccaaccttgttgagatgaagccaatgatggtgactttgaacaagatctcaatgc 30411139  T
Q  104 tgtcaagtaacaggtcaggaggtaaatacagctagaaacttgattggtaagttacctgcagaaacatctttttccaaagaagcagatgctcttaaccttg 203  Q
    ||||||   ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30411140 tgtcaat--acaggtcaggaggcaaatacatctagaaacttgattggtaagttacctgcagaaacatctttgtccaaagaagcagatgctcttaaccttg 30411237  T
Q  204 atgttgatgaacaagggtttcagattgttactagcaaatcaacaaaagaaagcttcaaagaaatctagtactcagaggatctcaaagtcaaaaccttatc 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30411238 atgttgatgaacaagggtttcagattgttactagcaaatcaacaaaagaaagcttcaaagaaatctagtactcagaggatctcaaagtcaaaaccttatc 30411337  T
Q  304 ttgccagatcaaaggttggtcctcccaaaccttttagatgagtgctattggaacttcagaggtttatctaatactcccacaaaattagctttaaagaaac 403  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30411338 ttgccagatcaaaggttggtcctcccaaaccttttagatgagtgctattggaacttcagaggtttagctaatactcccacaaaattagctttaaagaaac 30411437  T
Q  404 ttcttattaaatataagcatgatatatgttttacctatgaaccctagatgtctattaacaatcattcccatagatggctccataaccttggaagaagaag 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30411438 ttcttattaaatataagcatgatatatgttttacctatgaaccctagatgtctattaacaatcattcccctagatggctccataaccttggaagaagaag 30411537  T
Q  504 aaccctttggtctgtcatctctaatatccaaacccaatacaaaatcccttggagttgtgttggtgatttcaatacaatattgggatcaaatgaacacaaa 603  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30411538 aaccctttggtctgtcatctctaatatccaaacccaatacaaaatcccttggagttgtgttggtgatttcaatacaatattgggatcaaatgaacacaaa 30411637  T
Q  604 ggtattcatgaacctactaagttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacag 703  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  30411638 ggtattcatgaacctactaggttactgatggtcggatatgacaagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtatcaacag 30411737  T
Q  704 ggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagt 803  Q
    |||||||| |||||||| |||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  30411738 ggattgtcatttcgtcccaacaatttgcgttacttatttttgtaattttgacagtataaaagataggttgcaatttttatctgtttgcaacagagcaagt 30411837  T
Q  804 ttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30411838 ttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 30411903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 625 - 859
Target Start/End: Complemental strand, 27909237 - 27908992
Alignment:
Q  625 ttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaac 724  Q
    |||||||||||| |||||| ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| || || | ||||| |||||||    
T  27909237 ttactgatggtcagatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaac 27909138  T
Q  725 aatttgcgtaacttatttttgtaattttgacgatataaaagat------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtt 812  Q
    ||||  ||| |||||||||||||| |||||||||||||||| |            | |||||||||||||||||||||||||||||||||||||| || |    
T  27909137 aattcacgttacttatttttgtaagtttgacgatataaaagttaaaagggttagaacgttgcaatttttatctgtttgcaacagagcaagtttacctg-t 27909039  T
Q  813 tttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  27909038 tttggttgcagaaaattaagcagcggttaggattcttcgaatccccc 27908992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 649 - 858
Target Start/End: Original strand, 17349362 - 17349573
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa 748  Q
    ||||| ||||| ||||| | ||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||| || |||| ||||||||| ||||    
T  17349362 tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttatttt-gtaa 17349459  T
Q  749 ttttgacgatataa---aagata--ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 843  Q
     || ||||||||||   ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||     
T  17349460 gtt-gacgatataataaaagataagggttgcaatttttatctgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagcagcggtcaga 17349558  T
Q  844 atttttcgaatcccc 858  Q
    ||| |||||||||||    
T  17349559 attcttcgaatcccc 17349573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 629 - 855
Target Start/End: Complemental strand, 17743590 - 17743354
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||| ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  17743590 tgatggtcggatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaatt 17743491  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggt 818  Q
     | || ||||||||||| || ||| |||||||||||| ||           |||||||||||||||| ||||||||  ||||||||||| ||||||||||    
T  17743490 cgtgttacttatttttgcaagtttaacgatataaaagttaagggttagagagttgcaatttttatctttttgcaactaagcaagtttacctgtttttggt 17743391  T
Q  819 tgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    || ||||||| |||| |||||||||||| || |||||    
T  17743390 tgtagaaaaggaagccgcggttaggattatttgaatc 17743354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 29142986 - 29143174
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||||  ||||||||||||| |||||| ||| ||||||||  ||||| | ||||||| |||| |||||||||||||| ||||||| |||||||| |     
T  29142986 gtaataaaacgataagtagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttatttttgtaagtttgacggtataaaagttt 29143085  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
     |||||||||||||||||||||||||||||||||||||| |  ||||||||| |||||||||| ||||||||| |||| |||||||||||    
T  29143086 agttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgtagaaaagtaaacagcggttaagattcttcgaatcccc 29143174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 669 - 860
Target Start/End: Original strand, 25530472 - 25530662
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgt-aattttgacgatataaaagat 767  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||  | ||||  | | |||||||||||| | |||||| | |||||||| |    
T  25530472 gtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgtaaaattctcattacttatttttgtgagttttgatggtataaaag-t 25530570  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    | |||||||||||||||||||||||||||||| | ||||| || ||||||||||| || |||||||||||||||||||| |||||||||||||    
T  25530571 aagttgcaatttttatctgtttgcaacagagcgaatttacctg-ttttggttgcaaaatagtaagcagcggttaggattcttcgaatccccct 25530662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 629 - 858
Target Start/End: Original strand, 28925507 - 28925746
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||| ||||||||| ||||| || || | |||||||||||||||||||||  | ||||| ||  |||||||||||||||||||||||||    
T  28925507 tgatggtcggatatggcaagtgtactaaatcgtt-accaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaatt 28925605  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagat------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 816  Q
       || | |||||||||||| ||||||||||||||||||            || ||||||||||||| ||||||||||| ||||||||||| || |||||    
T  28925606 catgttatttatttttgtaagtttgacgatataaaagataaagggttagaaagcttgcaatttttatttgtttgcaacatagcaagtttacctg-ttttg 28925704  T
Q  817 gttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  28925705 gttgcagaaaagtaagcagaggttaggattcttcgaatcccc 28925746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 669 - 869
Target Start/End: Complemental strand, 26603424 - 26603223
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatat---aaaag 765  Q
    |||| ||||||||||||||||||||||||  | | |||||||| |||||| |||||||||  ||| |||||||||||    ||||||| |||   |||||    
T  26603424 gtaaaaaagtgataagtagagtatcgtatttatatggattgtcttttcgtgcaaacaattgacgttacttatttttgg---tttgacggtatgataaaag 26603328  T
Q  766 atag--gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgtt 863  Q
    ||||  ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||    
T  26603327 atagatgttgcaatttttatctgtttgcaacagagca-gtttacctgtttttggttgtagaaaagtaagcagcggttaggattcttcgaatccccctatt 26603229  T
Q  864 catatt 869  Q
     |||||    
T  26603228 tatatt 26603223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 669 - 860
Target Start/End: Original strand, 25535299 - 25535488
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgt-aattttgacgatataaaagat 767  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||   || |||||||||||| || ||||||| | |||||| |    
T  25535299 gtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttgtgaactttgacggt-taaaag-t 25535396  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    | |||||||||||||||| |||||||||| |  | ||||| || ||||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  25535397 aagttgcaatttttatctatttgcaacagcgtgaatttacctg-ttttggttgcaaaaaagtaagcagcggttgggattcttcgaatccccct 25535488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 645 - 858
Target Start/End: Complemental strand, 29719329 - 29719106
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  29719329 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgttacttattttt 29719230  T
Q  745 gtaattttgacgatataaaaga----------tag---gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
       | ||||||| ||||| | |          |||   |||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  29719229 ---agtttgacggtataataaaatataagggttagagagttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttggttgcagaaaagtaa 29719133  T
Q  832 gcagcggttaggatttttcgaatcccc 858  Q
    ||||| ||||||||| |||||||||||    
T  29719132 gcagcagttaggattcttcgaatcccc 29719106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 681 - 858
Target Start/End: Original strand, 25920303 - 25920478
Alignment:
Q  681 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 780  Q
    |||||||||||||||||| ||| |||||||| |||||||| |||||||  ||| |||||||||||||| || |||  |||||||| ||| ||||||||||    
T  25920303 taagtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttatttttgtaagtt-gacattataaaagttag-ttgcaatttt 25920400  T
Q  781 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||| ||||| | ||| |||| || ||||||||    
T  25920401 tatctgtttgcaacagagcgattttacctgtttttggttgcagaaaagtgagcagtgattatgattctttgaatcccc 25920478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 629 - 869
Target Start/End: Complemental strand, 17675744 - 17675491
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||| ||| ||||  ||||| ||||| | ||||||||| || |||||||| ||| ||||||||| ||||||||||||||| ||| ||      
T  17675744 tgatggtcggatatggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgtttcgtcaaaaaaaac 17675645  T
Q  729 tg-cgtaacttatttttgtaattttgacgatataaaagata-------------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 814  Q
    |  ||| |||||||||||||| || |||||| |||||||||             ||||||||||||||||||||||||||||||||||||||| || |||    
T  17675644 tcacgttacttatttttgtaagtt-gacgatgtaaaagataaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttt 17675547  T
Q  815 tggttgcagaaaagtaagcagcggttaggatttttcgaa-tccccctgttcatatt 869  Q
    ||||||||||||| ||| |||||||||| |||||||||| |||||||||| |||||    
T  17675546 tggttgcagaaaaataaacagcggttagaatttttcgaattccccctgtttatatt 17675491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 629 - 869
Target Start/End: Complemental strand, 17635889 - 17635637
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||| ||| ||||  ||||| ||||| | ||||||||| || |||||||| ||| |||| |||| ||||||||||||||| ||| || |    
T  17635889 tgatggtcggatatggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaact 17635790  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagata-------------ggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 815  Q
      ||| |||||||||||||| || |||||| |||||||||             ||||||||||||||||||||||||||||||||||||||| || ||||    
T  17635789 cacgttacttatttttgtaagtt-gacgatgtaaaagataaaagggttagaaaggttgcaatttttatctgtttgcaacagagcaagtttacctg-tttt 17635692  T
Q  816 ggttgcagaaaagtaagcagcggttaggatttttcgaa-tccccctgttcatatt 869  Q
    ||||||||| || ||| |||| ||||| |||||||||| |||||||||| |||||    
T  17635691 ggttgcagataaataaacagcagttagaatttttcgaattccccctgtttatatt 17635637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 645 - 858
Target Start/End: Original strand, 15339239 - 15339463
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | |||||||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||| |||| ||||| |||     
T  15339239 caagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgttacttacttt- 15339337  T
Q  745 gtaattttgacgatataa---aagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    |||| ||  | |||||||   |||||| |          ||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||    
T  15339338 gtaagtta-aggatataataaaagataagggttagagagttgcaatttttatttgtttgcaacagagcaagtttatctgttttttgttgcagaaaagtaa 15339436  T
Q  832 gcagcggttaggatttttcgaatcccc 858  Q
    ||||| ||||||||| ||| |||||||    
T  15339437 gcagcagttaggattcttcaaatcccc 15339463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 24091000 - 24090813
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||||   || |||||||||||||| ||||||| |||||||   |    
T  24091000 gtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttatttttgtaagtttgacggtataaaa-tga 24090902  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
     |||||||||||||| | ||||||| |  || | ||||| || |||||||||||||||||||||||| |||||||||  |||||||||||    
T  24090901 agttgcaatttttatatttttgcaaaactgcgaatttacctg-ttttggttgcagaaaagtaagcagtggttaggatgcttcgaatcccc 24090813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 669 - 859
Target Start/End: Original strand, 25618581 - 25618781
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa------ 762  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||| |||||||||||||||      ||||||||||||          
T  25618581 gtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgtaacttatttttag----ttgacgatataataaaag 25618676  T
Q  763 ------aagatagg---ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaa 853  Q
          ||| |||    |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| | ||| ||||||    
T  25618677 agtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtttacctg-ttttggttgcagaaaagtaagcagcggttcgaattcttcgaa 25618775  T
Q  854 tccccc 859  Q
    ||||||    
T  25618776 tccccc 25618781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 670 - 840
Target Start/End: Complemental strand, 31804973 - 31804791
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa---aaga 766  Q
    ||||||||||||||||||||||| ||||| |||| ||||| |||||||||||| |||| || || |||||||||||||| || ||||||||||   ||||    
T  31804973 taataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatctgtgttacttatttttgtaagtt-gacgatataataaaaga 31804875  T
Q  767 tagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 840  Q
    || |          ||||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||    
T  31804874 taagggttagagagttgcaatttttatttgtttgcaataaagcaaatttacctgtttttggttgcagaaaagtaagcagcggtt 31804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 656 - 852
Target Start/End: Original strand, 25196022 - 25196229
Alignment:
Q  656 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 755  Q
    |||| ||||| | ||||||||||||||||||||||||| |||| |||||| ||||| ||||||||||||||||  ||| |||||||||| | |  |||||    
T  25196022 aatcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttatttttattaagttgac 25196121  T
Q  756 gatataaaagata--gg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 843  Q
    |||||| ||| ||  ||          ||| ||||||||| ||||||||||| ||||||||||| || ||||||||||| |||||||||||| |||||||    
T  25196122 gatatataagttaatggttaaaaagacttgaaatttttatatgtttgcaacatagcaagtttacctg-ttttggttgcaaaaaagtaagcagtggttagg 25196220  T
Q  844 atttttcga 852  Q
    ||| |||||    
T  25196221 attcttcga 25196229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 681 - 858
Target Start/End: Original strand, 17197906 - 17198081
Alignment:
Q  681 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 780  Q
    |||||||||||| ||||| || | ||||||| |||||||| |||||||  |||  ||||||||||||| || |||  ||||||||  || |||||| |||    
T  17197906 taagtagagtattgtatccacggagattgtcctttcgtccgaacaattctcgtttcttatttttgtaagtt-gacagtataaaagtgag-ttgcaacttt 17198003  T
Q  781 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||| ||||||| |||||| | || || | ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  17198004 tatcagtttgcagcagagcgaattcacctatttttggttgcagaaaagtaagcagcggttaagattcttcgaatcccc 17198081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 646 - 744
Target Start/End: Complemental strand, 45621978 - 45621880
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    |||||||| ||||| ||||| | |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| | || ||||||||||    
T  45621978 aagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttattttt 45621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 771 - 859
Target Start/End: Complemental strand, 25887864 - 25887777
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||| ||| |||| ||| ||||||||    
T  25887864 ttgcaatttttatctgtttgcaacagagcaag-ttacctatttttggttgcagaaaagtaaccagcgattatgattcttcaaatccccc 25887777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 771 - 866
Target Start/End: Complemental strand, 23933505 - 23933412
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 866  Q
    |||||||||||||||||||||||||||||||||| || || ||| |||| || ||||||||||||||||||||||| || |||||||||| |||||    
T  23933505 ttgcaatttttatctgtttgcaacagagcaagtt-acttggttt-ggtttcacaaaagtaagcagcggttaggattctttgaatccccctattcat 23933412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 646 - 728
Target Start/End: Complemental strand, 20174732 - 20174650
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||||| ||||| ||||| | ||||||||||||||||||||||||| | || ||| |||||||||||||||||||||||||    
T  20174732 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaatt 20174650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 771 - 844
Target Start/End: Original strand, 32085602 - 32085673
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    |||||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||    
T  32085602 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-gtttggttgcagaaaagtaagcagcggttagga 32085673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 645 - 744
Target Start/End: Complemental strand, 12953392 - 12953293
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||  | |||||||||| ||||||||||||| || || ||| |||||||||||||||| |||||||| |||| ||||||||||    
T  12953392 caagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttacttattttt 12953293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 786 - 851
Target Start/End: Complemental strand, 12953290 - 12953225
Alignment:
Q  786 gtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcg 851  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  12953290 gtttgcaacatagcaagtttacatgtttttggttgcagaaaagtaagcaacgattacgattcttcg 12953225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 26667342 - 26667519
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | |||||||||||||||||| ||||||||| || |||||| | |||||||  ||| |||||||||||||| || |||| ||| ||||      
T  26667342 gtaataaagttagtaagtagagtatcgtatccacagggattttcctttcgtacgaacaattctcgttacttatttttgtaagtt-gacggtatcaaagt- 26667439  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
     |||||||||||           ||||| ||| | ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||    
T  26667440 -ggttgcaatttc----------caacatagcgattttacctgttttcggttgcagaaaagtaaacagcggttaggattcttcgaatcccc 26667519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 629 - 725
Target Start/End: Original strand, 32085448 - 32085544
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 725  Q
    ||||||||||||  |  |||||||| ||||  ||||| | ||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||    
T  32085448 tgatggtcggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaaca 32085544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 771 - 866
Target Start/End: Original strand, 45553268 - 45553360
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 866  Q
    ||||||||||||||||||||||||| |||||| |||| || |||||||||||| || || |||||||||||||||| || |||||||||| |||||    
T  45553268 ttgcaatttttatctgtttgcaacatagcaag-ttacctg-ttttggttgcag-aacgttagcagcggttaggattctttgaatccccctattcat 45553360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 671 - 744
Target Start/End: Complemental strand, 9774405 - 9774334
Alignment:
Q  671 aataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    |||||||||||  ||||||||||||||| ||| |||||||||||| |||||| |||||||||| ||||||||||    
T  9774405 aataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttattttt 9774334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 649 - 743
Target Start/End: Complemental strand, 25885553 - 25885460
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||| ||||| ||||| | ||||||| |||||||| | ||||||||||| ||| | ||||||||||||||||||||||||| || |||||||||    
T  25885553 tgtaccaaatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttatttt 25885460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 742
Target Start/End: Complemental strand, 8503168 - 8503071
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||| ||||| ||||| | ||||||| ||||||||||||| ||| |||| ||| |||||||| ||||  ||||||||||||||| ||| ||||    
T  8503168 caagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatttgcgttactaattt 8503071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 726
Target Start/End: Complemental strand, 19200232 - 19200152
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||| ||||||||||| |  |||||| ||||||||| |||||||||||| ||| ||||||||||||| |||||||||    
T  19200232 caagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtttcatccaaacaa 19200152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 742
Target Start/End: Complemental strand, 23011860 - 23011764
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||| |||| |||||| | ||||||||||| |||||||| ||| ||||| ||| |||||||||||| ||| ||||||||||||| | ||||||    
T  23011860 caagtgtaccaaattttttaccaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttttgtctaaacaatttgcgttatttattt 23011764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 743
Target Start/End: Complemental strand, 25888318 - 25888224
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||  ||||| | |||||||||||||||||| ||||||||||| ||| ||||||||||||    ||||||||| |||| |||||||||    
T  25888318 caagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgttt----caaacaattcgcgttacttatttt 25888224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 644 - 744
Target Start/End: Complemental strand, 11382852 - 11382752
Alignment:
Q  644 acaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||||  ||||| ||||| || |||||||||||||||||||||||| |||| ||| | |||||  |||| |||||| |||| |||| |||||||||    
T  11382852 acaagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataattcgcgttacttatttt 11382753  T
Q  744 t 744  Q
    |    
T  11382752 t 11382752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 771 - 831
Target Start/End: Original strand, 13776476 - 13776536
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||||||||||    
T  13776476 ttgcaatttttatctgtttgcaacagagtaagattacctgttttttgttccagaaaagtaa 13776536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 45553131 - 45553214
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||||| ||||  | |||||||||||||||||| | ||||||||  |||||||||||||||| |||||| |||||    
T  45553131 caagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaatt 45553214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 629 - 726
Target Start/End: Original strand, 13776324 - 13776420
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||| ||  ||||||||||  ||||| |||| ||  |||||||||||||||| |||||||||||| |||  ||||||| ||||||||||||||    
T  13776324 tgatggtcgaattagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaa 13776420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 17889922 - 17890034
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||   |||||||||| ||||| |||||||  ||||| |||| ||||||| ||||| |||  | ||||||||||||||||  |||||||||    
T  17889922 tgatggtcggattatacaagtgtaccaaatcgtttactaaataatacagtg-taagtagggtatcatattcatagggattgtcgtttcgatcaaacaatt 17890020  T
Q  729 tgcgtaacttattt 742  Q
    ||||| | ||||||    
T  17890021 tgcgttaattattt 17890034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 770 - 859
Target Start/End: Original strand, 17890075 - 17890162
Alignment:
Q  770 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||||||||| |||||||||||||||||| |||| || ||||||||||||||| ||||||| || ||| |||| ||  ||||||||    
T  17890075 gttgcaatttttatatgtttgcaacagagcaag-ttacctg-ttttggttgcagaaatgtaagcaacgattaagattctttcaatccccc 17890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 771 - 831
Target Start/End: Complemental strand, 11382713 - 11382654
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  11382713 ttgcaaattttatctgtttgcaacagagcaag-ttacttgttttttgttgtagaaaagtaa 11382654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 648 - 728
Target Start/End: Complemental strand, 28770538 - 28770458
Alignment:
Q  648 gtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||| ||||| ||||| |  ||||||||||||||||||||||||||||| | ||| | |||| |||| |||||||||||    
T  28770538 gtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaatt 28770458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 684 - 742
Target Start/End: Complemental strand, 21078685 - 21078627
Alignment:
Q  684 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||| |||  |||||||    
T  21078685 gtagagtatcgcatccacaaggattgtcgtttcgtccaaacaatttacgttgcttattt 21078627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 743
Target Start/End: Original strand, 27418391 - 27418465
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||||||||||||||||||| |||| ||| ||||| || ||||  |||||||||| | || |||||||||    
T  27418391 gtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttatttt 27418465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 714
Target Start/End: Complemental strand, 8447147 - 8447079
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 714  Q
    ||||||||| ||||| ||||| | |||||||||| ||||||||| ||||||||| ||| |||||||||||    
T  8447147 caagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccacatggattgtcgtt 8447079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 629 - 716
Target Start/End: Complemental strand, 12557823 - 12557736
Alignment:
Q  629 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    |||||||||||| | | ||||||||| ||||||||||| | ||||||||||| |||||||| ||||| ||| ||| |||||| ||||||    
T  12557823 tgatggtcggatttaggcaagtgtaccaaatcttttaccaagtaataaagtg-taagtagaatatcgaatccacaaggattgccgtttc 12557736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 814
Target Start/End: Complemental strand, 45621838 - 45621799
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttt 814  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  45621838 aatttttatctgtttgcaacatagcaagtttacttgtttt 45621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 742
Target Start/End: Original strand, 5777253 - 5777314
Alignment:
Q  681 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    |||||| ||||||| ||| | | |||||||||||||||||||||||||  ||| ||||||||    
T  5777253 taagtaaagtatcgaatctatatggattgtcgtttcgtccaaacaattcacgttacttattt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 743
Target Start/End: Complemental strand, 28606239 - 28606178
Alignment:
Q  682 aagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||||||||||| ||  |||||||||||||||| |||||  | |||| |||||||||    
T  28606239 aagtagagtatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttatttt 28606178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 1e-71; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 645 - 869
Target Start/End: Original strand, 21449090 - 21449314
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||  || ||||||||||    
T  21449090 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgttacttattttt 21449189  T
Q  745 gtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  21449190 gtaagtttgacggtataaaagataggtt-caatttttatctgtttgcaacatagcaagtttaactgtttttggatgcagaaaagtaagcagcggttagga 21449288  T
Q  845 tttttcgaatccc-cctgttcatatt 869  Q
    || |||||||||| |||||| |||||    
T  21449289 ttcttcgaatccctcctgtttatatt 21449314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 629 - 858
Target Start/End: Complemental strand, 18736354 - 18736126
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||| ||||||||| ||||| ||||  | ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  18736354 tgatggtcggatatggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatt 18736255  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 828  Q
    | ||| |||||||||||| |  |||||| |||||||  |||||||||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  18736254 tccgttacttatttttgt-aggttgacggtataaaatttaggttgcaaattttatctgtttgcaatagagcaagtttacctatttttggttgcagaaaag 18736156  T
Q  829 taagcagcggttaggatttttcgaatcccc 858  Q
    || |||||||| |||||| |||||||||||    
T  18736155 taggcagcggtaaggattcttcgaatcccc 18736126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 629 - 859
Target Start/End: Complemental strand, 17610370 - 17610129
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||||||||||||| ||||| ||||| | |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  17610370 tgatggtcggatatgacaagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatt 17610271  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaa-----------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 817  Q
      ||| |||||||||||||| ||||||||||||||           ||| || ||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  17610270 cacgttacttatttttgtaagtttgacgatataaaagttaaaggttagaaagcttgtaatttttatatgtttgcaacagagcaagtttacctgtttttgg 17610171  T
Q  818 ttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    ||||||||||||||||||||||||||||| || ||| |||||    
T  17610170 ttgcagaaaagtaagcagcggttaggattctttgaaaccccc 17610129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 629 - 845
Target Start/End: Original strand, 29242504 - 29242718
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||| ||||||||| ||||  ||||  | |||||||||||||||||||||||||||||| | || |||||||||||| |||||||||||    
T  29242504 tgatggtcggatatggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaatt 29242603  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 828  Q
     |||| || |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  29242604 cgcgttacatatttttgtaa-gttgacgatataaaagttaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaag 29242701  T
Q  829 taagcagcggttaggat 845  Q
    |||| ||||||||||||    
T  29242702 taagaagcggttaggat 29242718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 635 - 846
Target Start/End: Complemental strand, 21988090 - 21987880
Alignment:
Q  635 tcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgta 734  Q
    ||||||||| ||||||||| ||||| ||||| |  |||||||||||||||||||||||||||||  | | ||||||| |||||||||| ||||| ||||     
T  21988090 tcggatatggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgtt 21987991  T
Q  735 acttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca 834  Q
    ||||||||||||||  | |||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  21987990 acttatttttgtaagct-gacggtataaaagttaggttgcaatttttatatgtttgcaacagagcaactttacctgtttttggttgcataaaagtaagca 21987892  T
Q  835 gcggttaggatt 846  Q
    ||||| ||||||    
T  21987891 gcggtaaggatt 21987880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 629 - 860
Target Start/End: Complemental strand, 15544080 - 15543839
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||| ||| |||||| ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||    
T  15544080 tgattgtcagatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaatt 15543981  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagata-----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 817  Q
     | || |||||||||| ||| |||||||||||||||||||            |||||||||||||| ||||||||||| || |||||||| ||||||| |    
T  15543980 cgtgttacttatttttttaa-tttgacgatataaaagataagggttaaaagagttgcaatttttatttgtttgcaacatagtaagtttacctgttttttg 15543882  T
Q  818 ttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  15543881 ttgcagaaaagtaagcaacggttaggattcttcgaatccccct 15543839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 629 - 859
Target Start/End: Original strand, 12208586 - 12208827
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||||| |||||| ||||||||| ||||| ||||| | |||||||||||||||||||| |||| |||| ||| |||||||||||||||||||||||||    
T  12208586 tgatggtcagatatggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaatt 12208685  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagat-------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 815  Q
     |||| ||||||||||||||  |||||||||||||||||             ||||| || |||| |||||||||||||||||||||||||| || ||||    
T  12208686 cgcgttacttatttttgtaa-gttgacgatataaaagataaaagggttagaaaggtttcagttttaatctgtttgcaacagagcaagtttacctg-tttt 12208783  T
Q  816 ggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
     | |||||||||||||||||||||||||||| ||||||||||||    
T  12208784 agctgcagaaaagtaagcagcggttaggattcttcgaatccccc 12208827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 16917008 - 16916820
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | |||||||||||||||||| |||||||||||| |||||||| |||||||  ||| |||||||||| ||  || |||| |||||||| |    
T  16917008 gtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttatttttataggtt-gacggtataaaagtt 16916910  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    || ||||||||||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  16916909 ag-ttgcaatttttatctctttgcaacagagcgaatttacctgtttttggttgcagaaaagtaagcagcgggtaggattcttcgaatcccc 16916820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 640 - 846
Target Start/End: Complemental strand, 25405733 - 25405517
Alignment:
Q  640 tatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactta 739  Q
    |||| ||||||||| || || ||||| | |||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||| ||  ||| |||||    
T  25405733 tatggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttactta 25405634  T
Q  740 tttttgtaattttgacgatataaa------------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaa 827  Q
    |||||||||  |||||||||||||            ||| || ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||    
T  25405633 tttttgtaa-gttgacgatataaaagtttaagggttagaaagcttgcaatttttatttgtttgcaacagagcaagtttacttgtttttggttgcag-aaa 25405536  T
Q  828 gtaagcagcggttaggatt 846  Q
    |||||||||||||||||||    
T  25405535 gtaagcagcggttaggatt 25405517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 727492 - 727680
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||||||||||| ||| ||| |||||    |||||||| |||||||   || |||||||||||| | |||||||||||||||||||    
T  727492 gtaataaagtgataagtagagtatcgcatccacaaggattactctttcgtccgaacaattcttgttacttatttttgttagtttgacgatataaaagata 727591  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||| ||||||||||| || || ||||| || |||||||||||||||   |||||||||||| |||| |||||||||||    
T  727592 ggttgcaatttttatttgtttgcaacatagaaaatttacctg-ttttggttgcagaaagtaaagcagcggttaagattcttcgaatcccc 727680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 669 - 854
Target Start/End: Complemental strand, 16069625 - 16069440
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||| | |||| |||  |||||||||||||||||||   |||||||   || |||||||||||||| |||| || ||||||||  |    
T  16069625 gtaataaagtgataagtaaaatatcatatacacagggattgtcgtttcgtttgaacaattcttgttacttatttttgtaagtttggcggtataaaagtaa 16069526  T
Q  769 ggttgcaa-tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaat 854  Q
    |||||||| |||||||||| |||||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||| |||||||    
T  16069525 ggttgcaaatttttatctgcttgcaacagagcaagtttacctg-ttttggttgtagaaaagtaagcagcagttaggattcttcgaat 16069440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 18825680 - 18825868
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||| ||||||||||| ||| || ||||| ||| || | |||||||| ||| ||||| |||| ||| |||||||||| ||||| ||    
T  18825680 gtaataaagtgataagtaaagtatcgtatccacaagggttgtcctttagttcgaacaattttcgttacttaattttataagtttgacgatacaaaagtta 18825779  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
     |||||||||||||||||||| ||||| ||||| ||||| || ||||||||| |||||||||||||||| | |||||| || ||||||||    
T  18825780 agttgcaatttttatctgtttacaacaaagcaaatttacttg-ttttggttgtagaaaagtaagcagcgataaggattctttgaatcccc 18825868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 647 - 846
Target Start/End: Original strand, 16179010 - 16179219
Alignment:
Q  647 agtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgt 746  Q
    ||||||| ||||| ||||  | |||||||| ||||||||||||||||||||| | | |||  ||||||||||||||||||||   || ||||||||||||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttgt 16179109  T
Q  747 aattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcag 835  Q
    || || |||||||||||| ||| |           |||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  16179110 aagtt-gacgatataaaatataagggttagatgtcttgcaatttttatctgattgcaacagagcaagtttacctatttttggttgcagaaaagtaagcag 16179208  T
Q  836 cggttaggatt 846  Q
    |||||||||||    
T  16179209 cggttaggatt 16179219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 669 - 855
Target Start/End: Original strand, 24054004 - 24054188
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||| |||||||||||||| |||| |||||||||||| |||||||  ||||||||  || |||||||| ||||| ||||||| |||||||||||    
T  24054004 gtaataaagtaataagtagagtatc-tatccacagggattgtcctttcgtctcaacaatttttgttacttatttatgtaagtttgacggtataaaagata 24054102  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    | || |||||||||||||||||||||||||| | ||||| || |||||||||  |||||| ||||  | ||||||||| ||||||||    
T  24054103 gatttcaatttttatctgtttgcaacagagcgaatttacttg-ttttggttgttgaaaagaaagcgacagttaggattcttcgaatc 24054188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 669 - 857
Target Start/End: Original strand, 18830506 - 18830693
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||| |||||||||  || | ||||||||| |||||||||||| ||||||||||||||||    | |||||||||| ||||||||||| |||||||| ||    
T  18830506 gtaacaaagtgatacttaaattatcgtatccacagggattgtcctttcgtccaaacaattctttttacttatttttttaattttgacggtataaaagtta 18830605  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
     |||||||||| |||||||||||||||||| || ||||| || ||||||||||| ||||||||||| |  ||| ||||||| |||||||    
T  18830606 agttgcaatttctatctgtttgcaacagagaaattttacctg-ttttggttgcataaaagtaagcaacatttatgattttttgaatccc 18830693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 23179822 - 23180009
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | ||| ||||||||| |||| |||||||||||| |||||||| |||||||  ||| | |||||||||||| ||||||| |||||||| |    
T  23179822 gtaataaagttagtaaatagagtatcatatccacagggattgtcctttcgtccgaacaattctcgttatttatttttgtaagtttgacggtataaaag-t 23179920  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    | |||||||||||||||||||| ||| | | ||| ||||| | |||||||||| |||||||||||||||||| |||||| |||||||||||    
T  23179921 a-gttgcaatttttatctgtttacaaaataacaattttacct-tttttggttggagaaaagtaagcagcggtaaggattattcgaatcccc 23180009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 14781927 - 14781740
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||||||  |||||||||||||||||| ||| | |||||| |||||||| || ||||   |  |||||||||||||| |||||| | | ||||| ||    
T  14781927 gtaataaagtagtaagtagagtatcgtatccacaagaattgtcctttcgtccgaaaaattctagatacttatttttgtaagtttgacaagaaaaaag-ta 14781829  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    | ||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||| | |||| ||||||||| |||||||||||    
T  14781828 g-ttgcaatttttatatgtttgcatcagagcaaatttacctgtttttggttgcagaaaagtgatcagcagttaggattcttcgaatcccc 14781740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 647 - 858
Target Start/End: Original strand, 9401511 - 9401730
Alignment:
Q  647 agtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgt 746  Q
    ||||||| ||||  ||||| ||||||||||||   ||||||||||||||||| ||| | ||||||||||||||||||||||| |||| ||||||||||||    
T  9401511 agtgtaccaaatagtttaccaggtaataaagt---aagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttttgt 9401607  T
Q  747 aattt--tgacgatataaaagatag----------gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca 834  Q
    || ||  |||    ||||||||||           ||||||||||||||||||||||||||||| |||||||| || |||||||| || ||||||||| |    
T  9401608 aagttgttgatataataaaagataacggttagagagttgcaatttttatctgtttgcaacagagtaagtttacctg-ttttggttacaaaaaagtaagta 9401706  T
Q  835 gcggttaggatttttcgaatcccc 858  Q
    |||||||||||| |||||||||||    
T  9401707 gcggttaggattcttcgaatcccc 9401730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 21666682 - 21666483
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||  ||| |||||||||| |||  ||||||||||||||||||    
T  21666682 gtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataa-gttgacgatataaaagata 21666584  T
Q  769 --ggtt----------gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcc 856  Q
      ||||          | ||||||||||||||||||| | | ||||||||| || ||||||||| |||||||||||||  |||||||||| |||||||||    
T  21666583 agggttaaaaagactagtaatttttatctgtttgcaagacaacaagtttacctg-ttttggttgtagaaaagtaagcaatggttaggattcttcgaatcc 21666485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 629 - 764
Target Start/End: Original strand, 14779550 - 14779684
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||| ||||||||| ||||| ||||| | ||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||  |    
T  14779550 tgatggtcggatatggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatat 14779649  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaa 764  Q
     |||| | ||||||||||||  ||||||||||||||    
T  14779650 cgcgttatttatttttgtaa-gttgacgatataaaa 14779684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 645 - 858
Target Start/End: Original strand, 17359163 - 17359386
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | ||||||||||||||||| ||||||| |||| | |  ||||||||||||||||||| ||||  ||| ||||||||||    
T  17359163 caagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataattctcgttacttattttt 17359262  T
Q  745 gtaattttgacgatataa---aagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
       |  ||||||||||||   |||||| |          |||||||||||||||| | |||||| ||||| ||||| |||||||||||||| ||||||||    
T  17359263 ---aggttgacgatataataaaagataagggttagagagttgcaatttttatctgctggcaacatagcaaatttacctgtttttggttgcataaaagtaa 17359359  T
Q  832 gcagcggttaggatttttcgaatcccc 858  Q
    |  |||||||||||| |||||||||||    
T  17359360 gatgcggttaggattcttcgaatcccc 17359386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 646 - 846
Target Start/End: Complemental strand, 31236145 - 31235935
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    ||||||||  |||| ||||||| |||||||||||||||| |||||||  |||| |||  ||||||||||| ||||||| |||| |||| ||||||||||     
T  31236145 aagtgtaccgaatcgtttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgttacttattttt- 31236047  T
Q  746 taattttgacgatataaaaga----------tag---gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 832  Q
      |  |||||||||||| | |          |||   |||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||    
T  31236046 --aagttgacgatataataaaatataagggttagagagttgcaatttttatctctttgcaacagagcaagtttacttgtttttggttgcataaaagtaag 31235949  T
Q  833 cagcggttaggatt 846  Q
    || |||||| ||||    
T  31235948 caacggttaagatt 31235935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 771 - 858
Target Start/End: Complemental strand, 18100973 - 18100888
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||| || ||||||||    
T  18100973 ttgcaatttttatctgtttgcaacatagcaagtt-acatgtttt-ggttgcagaaaagtaagcagcggttatgattatttgaatcccc 18100888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 645 - 742
Target Start/End: Complemental strand, 13345434 - 13345337
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||| ||||  ||||| | ||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||||||| |||| ||||||||    
T  13345434 caagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttattt 13345337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 669 - 859
Target Start/End: Complemental strand, 21334793 - 21334591
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||| |||||||||||   ||| |||||| |||| |||||||||||  ||| |||||||||| ||| || ||||||||||||||||    
T  21334793 gtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttatttttttaagtt-gacgatataaaagata 21334695  T
Q  769 ----ggttgcaa----------tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaat 854  Q
        | ||| ||          ||||||||||||||||| | |||||||| || | |||||||||| |||||||||| |||||||||||||| |||||||    
T  21334694 aatggtttgaaagtcttacaattttttatctgtttgcaaaatagcaagtt-acctatttttggttgaagaaaagtaaacagcggttaggattcttcgaat 21334596  T
Q  855 ccccc 859  Q
    |||||    
T  21334595 ccccc 21334591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 771 - 858
Target Start/End: Original strand, 22623029 - 22623115
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||| |||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||| |||||||    
T  22623029 ttgccatttttatatatttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcagctgttaggattcttcaaatcccc 22623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 631 - 742
Target Start/End: Complemental strand, 24306417 - 24306307
Alignment:
Q  631 atggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttg 730  Q
    |||||||||| || ||||||||| || || ||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||  ||||| |||| |    
T  24306417 atggtcggatttggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcg 24306319  T
Q  731 cgtaacttattt 742  Q
    ||| ||||||||    
T  24306318 cgttacttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 669 - 744
Target Start/End: Complemental strand, 51473950 - 51473875
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    |||||||||||||||||||||||||||||| | | |||||||||||| ||||||||||||||||| |||| |||||    
T  51473950 gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgttttt 51473875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 629 - 742
Target Start/End: Complemental strand, 3591767 - 3591654
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||| ||||  | ||||||||||||||| |||||||||||||| |||  ||||||||||| ||||||||||||    
T  3591767 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaatt 3591668  T
Q  729 tgcgtaacttattt 742  Q
     || | ||||||||    
T  3591667 cgccttacttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 669 - 745
Target Start/End: Complemental strand, 16787800 - 16787724
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    |||||||||||||||||||||||||||||  |||  ||||||||||| | ||||||||||||||| |||||||||||    
T  16787800 gtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttacttatttttg 16787724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 773 - 860
Target Start/End: Complemental strand, 21973164 - 21973077
Alignment:
Q  773 gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccct 860  Q
    ||||||||||||||||||||||| | |||||| || ||||||||||||||||||||||| ||||||||  |||||| |||||||||||||    
T  21973164 gcaatttttatctgtttgcaacataacaagtt-acctgtttttggttgcagaaaagtaa-cagcggttagaggattcttcgaatccccct 21973077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 743
Target Start/End: Complemental strand, 23038109 - 23038012
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||| | ||||||||||||||||| |||||||||||| ||| |||||||||||||||| |||||| |  ||| |||||||||    
T  23038109 caagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttacttatttt 23038012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 17837502 - 17837615
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||  ||||| | |||||||||| |||||||||||||| |||| ||| |||||||| ||| ||| ||||||||    
T  17837502 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaatt 17837601  T
Q  729 tgcgtaacttattt 742  Q
     |||| ||||||||    
T  17837602 cgcgttacttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 771 - 844
Target Start/End: Original strand, 22664346 - 22664417
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  22664346 ttgcaatttttatttgtttgtaacagagcaagtt-acatgtttt-ggttgcagaaaagtaagtagcggttagga 22664417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 771 - 855
Target Start/End: Complemental strand, 17121460 - 17121378
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    ||||| |||| || ||||||||| |||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  17121460 ttgcatttttcatttgtttgcaatagagcaagtt-acttgtttt-ggttgcagaaaagtaagcagcggttaggattcttcgaatc 17121378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 629 - 741
Target Start/End: Complemental strand, 27117832 - 27117720
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||| ||| ||||| ||||| | |||||||||||||||||||||||| ||||  ||| | |||||||||||  |||||||||     
T  27117832 tgatggtcggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaatc 27117733  T
Q  729 tgcgtaacttatt 741  Q
    ||||| |||||||    
T  27117732 tgcgttacttatt 27117720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 771 - 855
Target Start/End: Original strand, 28008244 - 28008326
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    ||||||||||||||||||| ||| ||||||| || || |||||| ||||||||||||||||||||||||||||||| || |||||    
T  28008244 ttgcaatttttatctgtttccaatagagcaaatt-acttgtttt-ggttgcagaaaagtaagcagcggttaggattctttgaatc 28008326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 774 - 845
Target Start/End: Complemental strand, 18529149 - 18529079
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggat 845  Q
    |||||||||||  ||||||||||||||||||||| || ||||||||| |||||||||||||| |||||||||    
T  18529149 caatttttatcaatttgcaacagagcaagtttacctg-ttttggttgtagaaaagtaagcagtggttaggat 18529079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 21847635 - 21847717
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||||| ||||| | ||||||||||  |||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  21847635 caagtgtaccaaatcgtttaccaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtccaaacaatt 21847717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 787 - 846
Target Start/End: Complemental strand, 25404036 - 25403977
Alignment:
Q  787 tttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||| |||||||||||||    
T  25404036 tttgcaacagagcaactttacctgtttttggttccagaaaagtaagtagcggttaggatt 25403977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 771 - 858
Target Start/End: Complemental strand, 32382968 - 32382883
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||||||||||||||||||||||  |||| || ||||||||||||||| || |||||| ||||||||| || ||||||||    
T  32382968 ttgcaatttttatctgtttgcaacagagcaa-attacctg-ttttggttgcagaaatgttagcagccgttaggattctttgaatcccc 32382883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 649 - 743
Target Start/End: Original strand, 24281282 - 24281376
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||| ||||| ||||| | |||||||||||||||||||| |||| |||| ||| ||||| ||||||  ||| |||||||||||| |||||||||    
T  24281282 tgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttacttatttt 24281376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 771 - 858
Target Start/End: Complemental strand, 15807980 - 15807895
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||| ||||||||||||||||||||  ||   ||||||||| |||||| ||||||||| |||||||| || ||||||||    
T  15807980 ttgcaatttttatttgtttgcaacagagcaagttacca--gttttggttgtagaaaaataagcagcgattaggattctttgaatcccc 15807895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 771 - 842
Target Start/End: Complemental strand, 9787839 - 9787769
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttag 842  Q
    |||||||||| | ||||||||||||||||||||  || ||||||||||||||||||||||||  ||||||||    
T  9787839 ttgcaattttgaactgtttgcaacagagcaagtg-acctgtttttggttgcagaaaagtaagttgcggttag 9787769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 743
Target Start/End: Complemental strand, 15813268 - 15813155
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||| ||||  | ||||||||||||||||| || ||||||||| ||| ||||| ||||| ||||||||||| |    
T  15813268 tgatggtcggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaact 15813170  T
Q  729 tgcgtaacttatttt 743  Q
      ||| |||||||||    
T  15813169 ctcgttacttatttt 15813155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 649 - 743
Target Start/End: Original strand, 22664211 - 22664305
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||| ||||| ||||| | ||||||||||||||||||||||||| |||| || |||||| || ||||||| |||||| | ||||  ||||||||    
T  22664211 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgcttatttt 22664305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 723
Target Start/End: Original strand, 44795354 - 44795447
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    |||| |||||||  |||||||||||  || | ||||| | ||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||||    
T  44795354 tgatagtcggattagacaagtgtaccgaagcatttaccaagtaataaagagataagt-gagtatcgtatccacatggattgtcgtttcgtccaaa 44795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 645 - 726
Target Start/End: Complemental strand, 9787977 - 9787896
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||| ||||| ||||  | |||||||||||||||||||||||||||||| | |   |||||||||||||| ||||||    
T  9787977 caagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaa 9787896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 771 - 860
Target Start/End: Complemental strand, 12012773 - 12012686
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||| ||||||||||| ||| |||| || |||||| ||||||| |||||||| || || |||||||| |||||||||||||    
T  12012773 ttgcaatttttatttgtttgcaacatagcgagtt-acctgtttt-ggttgcacaaaagtaaacaacgattaggattcttcgaatccccct 12012686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 774 - 859
Target Start/End: Complemental strand, 23037969 - 23037884
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccc 859  Q
    |||||||| ||||||||||||| |||||| |||| |||||||||||||||||| |||| ||| ||||  |||||| ||||||||||||    
T  23037969 caatttttttctgtttgcaacatagcaag-ttacttgtttttggttgcagaaatgtaa-cagtggttagaggattcttcgaatccccc 23037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 669 - 744
Target Start/End: Original strand, 22620287 - 22620362
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||||||||| |||||||||||||| | ||| |||||| ||||||| ||| ||||  ||| ||||||||||    
T  22620287 gtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttacttattttt 22620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 669 - 744
Target Start/End: Original strand, 22622915 - 22622990
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||||||| ||||||||||| ||||   |||||||||| ||||||||||| |||| |||| ||||| ||||    
T  22622915 gtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgttacttaatttt 22622990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 775 - 846
Target Start/End: Original strand, 33190820 - 33190889
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    ||||||||| |||||||||||| ||||||| || || ||| | |||||||||||||||||||||||||||||    
T  33190820 aatttttatttgtttgcaacagtgcaagtt-acctggttt-gattgcagaaaagtaagcagcggttaggatt 33190889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 743
Target Start/End: Original strand, 24214569 - 24214643
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||||||||||||| ||||  ||||| ||| ||||||| |||||||| |||||| || ||| |||||||||    
T  24214569 gtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaacttacgttacttatttt 24214643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 26540880 - 26540993
Alignment:
Q  629 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||||||| | | ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||| || || |  | | |||||    
T  26540880 tgatggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattccaactagacaat 26540978  T
Q  728 ttgcgtaacttattt 742  Q
    |||||| ||||||||    
T  26540979 ttgcgttacttattt 26540993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 822 - 859
Target Start/End: Complemental strand, 13345248 - 13345211
Alignment:
Q  822 agaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13345248 agaaaagtaaacagcggttaggatttttcgaatccccc 13345211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 769 - 834
Target Start/End: Original strand, 14779702 - 14779766
Alignment:
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca 834  Q
    ||||||||||||||| ||||| ||||| | ||||||||| || ||||||||| |||||||||||||    
T  14779702 ggttgcaatttttatttgtttacaacatatcaagtttacttg-ttttggttgaagaaaagtaagca 14779766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 860
Target Start/End: Complemental strand, 15813463 - 15813415
Alignment:
Q  812 ttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||||||||||||| ||||| ||| || ||||||||||    
T  15813463 ttttggttgcagaaaagtaagcagcagttagtattcttagaatccccct 15813415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 643 - 743
Target Start/End: Complemental strand, 26649070 - 26648971
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||  ||||| ||||| | |||||||| |||||||| || ||| ||||| ||| ||||| ||||||||||||||||| | |||| | ||||||    
T  26649070 gacaagtgtatcaaatcgtttaccaagtaataaaatgataagt-gaatattgtatccacatggattatcgtttcgtccaaacaactcgcgttatttattt 26648972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 771 - 834
Target Start/End: Original strand, 16360010 - 16360071
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca 834  Q
    ||||||||||||| ||||||||||| |||||| |||| || ||||||||||||||||| |||||    
T  16360010 ttgcaatttttatttgtttgcaacaaagcaag-ttacctg-ttttggttgcagaaaagaaagca 16360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 813 - 860
Target Start/End: Complemental strand, 25961085 - 25961038
Alignment:
Q  813 tttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    |||||||||||||||||||| ||||||||||| | || ||||||||||    
T  25961085 tttggttgcagaaaagtaagaagcggttaggactctttgaatccccct 25961038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 669 - 743
Target Start/End: Original strand, 147656 - 147730
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||||||||||| ||||||| |||  ||| |||||||| ||||||| |||||  | |||| |||||||||    
T  147656 gtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcgttacttatttt 147730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 671 - 744
Target Start/End: Complemental strand, 15813597 - 15813523
Alignment:
Q  671 aataaagtgataa-gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||||||| ||||||||| ||||| ||| ||||||||||||| |  |||||||| | || ||||||||||    
T  15813597 aataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaacaattcgtgttacttattttt 15813523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 629 - 743
Target Start/End: Original strand, 33190662 - 33190776
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  |||| |||||| ||||| ||||  | |||||||| |||||||||||||||  |||| |||   ||||||||||| || |||||| |    
T  33190662 tgatggtcggattagacaggtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaact 33190761  T
Q  729 tgcgtaacttatttt 743  Q
     | || |||||||||    
T  33190762 cgtgttacttatttt 33190776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 32383096 - 32383047
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcg 694  Q
    ||||||||| ||||| ||||| | ||||||||||||||| ||||||||||    
T  32383096 caagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatcg 32383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 7e-70; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 629 - 859
Target Start/End: Complemental strand, 19492814 - 19492585
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||  ||||||||| ||||| ||||| | ||||||||| |||||||||||||||||||| ||| | ||||||||||| |||||||||||    
T  19492814 tgatggtcggatatatcaagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaatt 19492715  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 828  Q
     |||| |||||||||||||  || ||| ||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  19492714 cgcgttacttatttttgtaggtt-gacaatataaaagttaggttgcaatatttatttgtttgcaacacagcaagtttacatgtttttggttgcagaaaag 19492616  T
Q  829 taagcagcggttaggatttttcgaatccccc 859  Q
    ||||| |||||||||||| ||||||||||||    
T  19492615 taagcggcggttaggattcttcgaatccccc 19492585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 629 - 860
Target Start/End: Original strand, 13908839 - 13909081
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||||  ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  13908839 tgatggtcgaatatagcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 13908938  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaag-atagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 817  Q
     | || ||||||||||||||||||||||||||||||| | |||          ||||||||||||||||||||||||||||||||||||| |||||||||    
T  13908939 cgtgttacttatttttgtaattttgacgatataaaagtaaaggttagaaagtcttgcaatttttatctgtttgcaacagagcaagtttacctgtttttgg 13909038  T
Q  818 ttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||| ||||||||||||||||||||||| || ||||||||||    
T  13909039 ttgcaaaaaagtaagcagcggttaggattctttgaatccccct 13909081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 629 - 860
Target Start/End: Original strand, 15164752 - 15164992
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||||||||||||| ||||| ||||| | ||||| || | ||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  15164752 tgatggtcggatatgacaagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatt 15164851  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggt 818  Q
    ||||| |||||||||||||| |||||||||||||||| ||           |||||||||||||| ||||||||||||||||||||||| || |||||||    
T  15164852 tgcgttacttatttttgtaagtttgacgatataaaagttaagggttagagagttgcaatttttatttgtttgcaacagagcaagtttacctg-ttttggt 15164950  T
Q  819 tgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||  | ||||||  || |||||||||||||    
T  15164951 tgcagaaaagtaagtggaggttagttttcttcgaatccccct 15164992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 645 - 856
Target Start/End: Complemental strand, 13692767 - 13692557
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | ||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||| | || ||||||||||    
T  13692767 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttacttattttt 13692668  T
Q  745 gtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    |||  || || | ||||||| ||||||||||||||||||  ||||| || ||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  13692667 gtaggtt-gaaggtataaaatataggttgcaatttttattagtttgtaaaagagcaagtttacctgtttttggttgcagaaaagtaagcagtagttagga 13692569  T
Q  845 tttttcgaatcc 856  Q
    || |||||||||    
T  13692568 ttcttcgaatcc 13692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 628 - 858
Target Start/End: Original strand, 7582281 - 7582522
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    ||||||||||||||||  |||||||| ||||| ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||    
T  7582281 ctgatggtcggatatggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaat 7582380  T
Q  728 ttgcgtaacttatttttgtaattttgacgatataaaagat---agg--------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 816  Q
     ||| | ||||||||| |||| ||||||||||||||||||   |||        |||||||||| |||||||||||| ||| ||||||||| ||||||||    
T  7582381 ctgcattacttattttggtaagtttgacgatataaaagataaaaggcttaggatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttg 7582480  T
Q  817 gttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||| ||||||| |||||||||| || ||||||||    
T  7582481 gttgcagaaaaataagcagtggttaggattctttgaatcccc 7582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 681 - 858
Target Start/End: Complemental strand, 17026394 - 17026218
Alignment:
Q  681 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 780  Q
    |||||||||||||||||  ||| |||||||| ||||||   |||||||   || |||||||||||||| ||||||  ||||||||  || ||||| ||||    
T  17026394 taagtagagtatcgtattcacatggattgtcctttcgtgggaacaattctagttacttatttttgtaagtttgacagtataaaagtgag-ttgcagtttt 17026296  T
Q  781 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  17026295 tatctgtttgcaacagagtaaatttacctgtttttggttgcagacaagtaagcagcggttaggattcttcgaatcccc 17026218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 629 - 869
Target Start/End: Original strand, 17216802 - 17217058
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||||| |||||| ||| ||||| ||||| ||||| | | ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  17216802 tgatggtcagatatggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaatt 17216901  T
Q  729 tgcgtaacttatttttgtaattttgacgatataa---aagatag------------gttgcaatttttatctgtttgcaacagagcaagtttacatgttt 813  Q
      ||| |||||| ||||||| || || |||||||   ||||||             ||||||||||||||||||||||||||||||||||||||||| ||    
T  17216902 ctcgttacttatatttgtaagtt-gatgatataatacaagataaaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacatg-tt 17216999  T
Q  814 ttggttgcagaaaagtaagcagcggttag---gatttttcgaatccccctgttcatatt 869  Q
    ||||||| ||||||||||||| |||||||   |||| ||||||| |||||||| |||||    
T  17217000 ttggttgtagaaaagtaagcaacggttaggatgattcttcgaattcccctgtttatatt 17217058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 629 - 816
Target Start/End: Complemental strand, 16730513 - 16730316
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||| || |||||| |||||  |||| | | || ||||||||||||||||||||||||| | | ||||| ||||||||||||||||| |    
T  16730513 tgatggtcggatatggcatgtgtactaaatcgcttacgaagaaagaaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaact 16730414  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagat----------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 816  Q
     |||| |||||||||||||| |||||| ||||||||| |          | |||||||||||||||||||||||||||||||||||||| ||||||||    
T  16730413 cgcgttacttatttttgtaagtttgacaatataaaagttaagggttagaaagttgcaatttttatctgtttgcaacagagcaagtttacctgtttttg 16730316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 645 - 858
Target Start/End: Complemental strand, 19562276 - 19562049
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | |||||||||||||||||| |||||||| || ||| | ||||||||||| |||||||||||||  | ||||||||||    
T  19562276 caagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatttgtattacttattttt 19562177  T
Q  745 gtaattttgacgatataa---aagata----ggtt--------gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagt 829  Q
     ||| ||||||  |||||   ||||||    ||||        ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  19562176 -taagtttgacattataataaaagataaaagggttatttaattgcaatttttatctctttgcaacagagcaagtttacctgtttttggttgcagaaaagt 19562078  T
Q  830 aagcagcggttaggatttttcgaatcccc 858  Q
    || |||||||||| ||| |||||||||||    
T  19562077 aatcagcggttagaattcttcgaatcccc 19562049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 645 - 858
Target Start/End: Original strand, 17709758 - 17709978
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||| | |||||||||  ||| |||   ||||||  ||| ||||||||||    
T  17709758 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgttcttttgtc---acaattctcgttacttattttt 17709854  T
Q  745 gtaattttgacgatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 832  Q
     |||||| |||||||||||||||| |            ||| ||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||    
T  17709855 ataattt-gacgatataaaagataagggttaaaaagacttgaaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaagtaag 17709952  T
Q  833 cagcggttaggatttttcgaatcccc 858  Q
     ||| ||||||||| |||||||||||    
T  17709953 tagctgttaggattcttcgaatcccc 17709978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 669 - 860
Target Start/End: Complemental strand, 17337209 - 17337007
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataa---aag 765  Q
    ||||||| |||||||||||||||||||||| | || ||||||| ||||||||||||||||||||| ||||||||||      ||||||||||||   |||    
T  17337209 gtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttatttttag----ttgacgatataataaaag 17337114  T
Q  766 at---agg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaa 853  Q
    |    |||         ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| | ||| |||| ||||||    
T  17337113 agtaaagggtttgagatttgcaatttttatctgtttacaacagagcaagtttacctgtttttggttgcataaaagtaagcagagattatgattcttcgaa 17337014  T
Q  854 tccccct 860  Q
    |||||||    
T  17337013 tccccct 17337007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 19882625 - 19882738
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||| ||||  | ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  19882625 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaatt 19882724  T
Q  729 tgcgtaacttattt 742  Q
     |||| ||||||||    
T  19882725 cgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 669 - 856
Target Start/End: Original strand, 25097859 - 25098044
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | |||||||||||||||||| ||| |||||||  ||| |||| || ||||   || |||||||||| ||   ||||| |||| |||| |    
T  25097859 gtaataaagttagtaagtagagtatcgtatccacatggattgttcttttgtccgaaaaattcatgttacttatttttata--gttgacaatattaaagtt 25097956  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcc 856  Q
    | ||||||||||||||||||| |||||| ||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||    
T  25097957 a-gttgcaatttttatctgttggcaacaaagcaaatttacctgtttttggttgttgaaaagtatgcagcggttaggattcttcgaatcc 25098044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 645 - 837
Target Start/End: Complemental strand, 13128972 - 13128768
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||||| | |||| ||||||||||    
T  13128972 caagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttacttattttt 13128873  T
Q  745 gtaattttgacgat---ataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt-ggttgcagaaaagta 830  Q
     ||   ||||| ||   ||||||||||           |||||||||||||| |||||| ||||||| |||||| | ||||||| |||||||||||||||    
T  13128872 tta--gttgaccatataataaaagataagggttagagagttgcaatttttatttgtttggaacagagtaagtttgcctgtttttcggttgcagaaaagta 13128775  T
Q  831 agcagcg 837  Q
    |||||||    
T  13128774 agcagcg 13128768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 645 - 742
Target Start/End: Original strand, 20315001 - 20315098
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||| ||||| ||||| | |||||||| ||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  20315001 caagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 629 - 745
Target Start/End: Complemental strand, 21323989 - 21323873
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||| ||||| |  |||||| ||||| |||||||||||||||| |||  ||||||||||||||||||||||||    
T  21323989 tgatggtcggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 21323890  T
Q  729 tgcgtaacttatttttg 745  Q
     |||| |||||||||||    
T  21323889 cgcgttacttatttttg 21323873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 766 - 866
Target Start/End: Complemental strand, 25121191 - 25121093
Alignment:
Q  766 ataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttca 865  Q
    |||| ||||||||| |||||||||||||||||||||||| ||  ||||| | ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  25121191 atagattgcaatttctatctgtttgcaacagagcaagtt-acccgtttt-gattgcagaaaagtaagcagcggttaggattcttcgaatccccctattca 25121094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 681 - 858
Target Start/End: Complemental strand, 12406753 - 12406577
Alignment:
Q  681 taagtagagtatcgtatcaacagggattgt-cgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaatt 778  Q
    |||||||| |||||| |  ||| ||||||| | |||||||| |||||||   || |||||||||||||| |||||||||||||||||  || ||| ||||    
T  12406753 taagtagaatatcgtttgcacatggattgttcttttcgtccgaacaattcttgttacttatttttgtaagttttgacgatataaaagtgag-ttg-aatt 12406656  T
Q  779 tttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||| | ||||||||| ||||| | ||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  12406655 ttttt-tgtttgcaatagagcgaatttacctgtttttggttgcaggaaagtaaacagcggttaggattcttcgaatcccc 12406577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 778 - 857
Target Start/End: Complemental strand, 24639415 - 24639336
Alignment:
Q  778 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||| || |||||||    
T  24639415 ttttatttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaagcagtggttaggattctttgaatccc 24639336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 25094592 - 25094779
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | ||||||||||||| |||| ||| |||||||  ||||||||||||||||   || ||||| ||||||| ||   ||| |||||||| |    
T  25094592 gtaataaagttagtaagtagagtatcatatccacatggattgttctttcgtccaaacaattcttgttacttaattttgtagtta--acggtataaaagtt 25094689  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    || ||||||||||||||||||||||||| ||| | ||||| |  |||||| || ||||||  ||||||||||||||||| || ||||||||    
T  25094690 ag-ttgcaatttttatctgtttgcaacaaagcgaatttacctagttttggatgtagaaaatcaagcagcggttaggattcttagaatcccc 25094779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 669 - 743
Target Start/End: Original strand, 11490557 - 11490631
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||| |||||||||    
T  11490557 gtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttacttatttt 11490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 645 - 743
Target Start/End: Complemental strand, 12578364 - 12578266
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||| |  |||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||||||||||  ||||||||    
T  12578364 caagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttcttatttt 12578266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 627 - 743
Target Start/End: Original strand, 17671985 - 17672101
Alignment:
Q  627 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    |||||||| |||||  | ||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||| ||| ||||||| |||||||| ||||||    
T  17671985 actgatggccggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaa 17672084  T
Q  727 tttgcgtaacttatttt 743  Q
     | |||| |||||||||    
T  17672085 ctcgcgttacttatttt 17672101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 774 - 869
Target Start/End: Original strand, 14649036 - 14649130
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| || || ||||||||| | || ||||||||||||| |||||    
T  14649036 caatttttatctgtttgcaacagagcaag-ttacttgtttttggttgtagaaaaggaaacaacggttaggactctttgaatccccctgtttatatt 14649130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 643 - 743
Target Start/End: Original strand, 5679204 - 5679304
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||| ||||| ||||| | ||||||||||||| |||||||||||||||| ||| | | | | ||||||||||||||||| |||| ||||||||    
T  5679204 gacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttacttattt 5679303  T
Q  743 t 743  Q
    |    
T  5679304 t 5679304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 771 - 866
Target Start/End: Complemental strand, 26115865 - 26115772
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 866  Q
    |||||||||||||||||||||||||||| ||||| || |||||| ||||||| ||| || |||||||||||||||| ||| ||||||||| |||||    
T  26115865 ttgcaatttttatctgtttgcaacagagtaagtt-acctgtttt-ggttgcataaatgttagcagcggttaggattcttcaaatccccctattcat 26115772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 774 - 869
Target Start/End: Original strand, 40227917 - 40228011
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||||||||||||||||| ||| |||||||| | ||||| ||||| ||||| |||||||||||||||||| || |||||||||| || |||||    
T  40227917 caatttttatctgtttgcaacggagtaagtttacctattttttgttgccgaaaaataagcagcggttaggattctt-gaatccccctatttatatt 40228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 629 - 733
Target Start/End: Complemental strand, 9737623 - 9737514
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgat-----aagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    ||||||||||||  | ||||||||| ||||| ||||| | |||||||||||||     ||||||||||||||||| ||| ||||||| |||||||| |||    
T  9737623 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtctaaa 9737524  T
Q  724 caatttgcgt 733  Q
    ||||||||||    
T  9737523 caatttgcgt 9737514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 669 - 730
Target Start/End: Complemental strand, 24639528 - 24639467
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttg 730  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||    
T  24639528 gtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatttg 24639467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 629 - 742
Target Start/End: Complemental strand, 25121339 - 25121227
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  |  |||||| | ||||| ||||| | ||||||||||| |||||| ||||||||||| ||| ||||||| |||||||||||||||||    
T  25121339 tgatggtcggattaggaaagtgttccaaatcgtttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaatt 25121241  T
Q  729 tgcgtaacttattt 742  Q
     |||| ||||||||    
T  25121240 cgcgttacttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 628 - 716
Target Start/End: Original strand, 14648879 - 14648966
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    ||||||||| |||  | ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  14648879 ctgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttc 14648966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 771 - 846
Target Start/End: Original strand, 17672141 - 17672214
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    |||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||| ||| |||||||||    
T  17672141 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-gtttggttgcagaaaagtaagaagcagttaggatt 17672214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 646 - 728
Target Start/End: Complemental strand, 13992973 - 13992891
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||||| ||||  ||||| | ||||||||||| |||||||||||||||||| ||| ||||| |||||| ||||||||||||    
T  13992973 aagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaatt 13992891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 774 - 828
Target Start/End: Complemental strand, 19929632 - 19929579
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 828  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  19929632 caatttttatctgtttgcaacagagcaa-attacatgtttttggttgcagaaaag 19929579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 645 - 719
Target Start/End: Complemental strand, 19929773 - 19929699
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 719  Q
    ||||||||| ||||| ||||| | |||| |||||||||| |||||||||||||| ||| ||||||||||||||||    
T  19929773 caagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtc 19929699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 771 - 840
Target Start/End: Complemental strand, 17951256 - 17951189
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 840  Q
    |||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||| |||||||||||    
T  17951256 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-atttggttgcagaaaagcaagcagcggtt 17951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 643 - 743
Target Start/End: Complemental strand, 8969821 - 8969722
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||| ||||  ||||| | ||||||||||| ||||||||| | |||||| || | |||||||||||||||||||||||| | || ||||||||    
T  8969821 gacaagtgtaccaaattatttacaaagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttacttattt 8969723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 646 - 726
Target Start/End: Original strand, 15047130 - 15047210
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    |||||| | ||||| ||||| | ||||||||||||||||||||| |||||||| ||| ||||| |||||||||| ||||||    
T  15047130 aagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaa 15047210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 646 - 726
Target Start/End: Complemental strand, 15107294 - 15107214
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    |||||| | ||||| ||||| | ||||||||||||||||||||| |||||||| ||| ||||| |||||||||| ||||||    
T  15107294 aagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtctaaacaa 15107214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 771 - 859
Target Start/End: Complemental strand, 22357492 - 22357405
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    ||||||||||||| ||||||||| | |||||||| || |||||||| ||||||||||| ||||| || |||||| |||| |||||||||    
T  22357492 ttgcaatttttatttgtttgcaatatagcaagtt-acttgtttttgattgcagaaaaggaagcatcgtttaggactttttgaatccccc 22357405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 743
Target Start/End: Original strand, 9052654 - 9052772
Alignment:
Q  624 gttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    |||||||||||||||||  | ||||||||| ||||| ||||| | |||||||| || ||||||||||||||||||  ||  |||||| |||||  |||||    
T  9052654 gttactgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatccgcaaagattgttgtttcaaccaaa 9052752  T
Q  724 caatttgcgtaacttatttt 743  Q
    |||||  ||| |||||||||    
T  9052753 caattcacgttacttatttt 9052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 669 - 728
Target Start/End: Complemental strand, 19636660 - 19636601
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||| |||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  19636660 gtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaatt 19636601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 719
Target Start/End: Complemental strand, 17951410 - 17951320
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 719  Q
    ||||||||||||  ||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||||||| |  ||  |||||||||||||    
T  17951410 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtc 17951320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 771 - 837
Target Start/End: Complemental strand, 17955108 - 17955044
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcg 837  Q
    |||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||| ||||||||    
T  17955108 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-atttggttgcagaaaagcaagcagcg 17955044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 719
Target Start/End: Complemental strand, 17955262 - 17955172
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 719  Q
    ||||||||||||  ||||||||||| ||||| ||||| | ||| |||||||||||||| ||||||||||| |  ||  |||||||||||||    
T  17955262 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtc 17955172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 743
Target Start/End: Complemental strand, 20829836 - 20829739
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||| | ||||||||||||||| | |||||| ||||| ||| ||||||| ||||||| |||| ||||||| | |||||||||    
T  20829836 caagtgtaccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggattgttgtttcgttcaaaaaatttgcattacttatttt 20829739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 735
Target Start/End: Complemental strand, 22176060 - 22175970
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaa 735  Q
    ||||||||| ||||| ||||  | |||||||||||||||||||||||| ||||| | || ||||||| |||  ||||||||||| ||||||    
T  22176060 caagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcgtaa 22175970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 669 - 726
Target Start/End: Original strand, 19092320 - 19092377
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    |||||||||||||||| ||||||||| ||  ||| |||||||||||||||||||||||    
T  19092320 gtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaa 19092377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 23080326 - 23080439
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||| ||||  || |||||||| ||||  ||||| |  |||||| |||||||||||| ||| ||||  ||| |||||||||||||  ||||||||||    
T  23080326 tgatggttggattagataagtgtactaaataatttaccaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatt 23080425  T
Q  729 tgcgtaacttattt 742  Q
    ||||| ||||||||    
T  23080426 tgcgttacttattt 23080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 742
Target Start/End: Complemental strand, 19374909 - 19374814
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    |||||||| ||||| ||||  | |||||||| || |||||||||||||||||| || | ||||||||||| |||||||||||||   ||||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatg-taagtagagtatcgtatccactgagattgtcgttttgtccaaacaatttatataacttattt 19374814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 742
Target Start/End: Original strand, 22526390 - 22526462
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||||||||||||||||||||| ||| | |||||||||||  |||||| || || || ||||||||    
T  22526390 taataaagtgataagtagagtatcgtatccacatgaattgtcgtttcaaccaaaccatctgtgttacttattt 22526462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 771 - 814
Target Start/End: Complemental strand, 9264966 - 9264923
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 814  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  9264966 ttgcaatttttatctgtttgcaacagagaaagtttacgtgtttt 9264923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 656 - 743
Target Start/End: Original strand, 11933431 - 11933517
Alignment:
Q  656 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||| ||||| | ||||| ||||||||||| |||||||||  | ||| ||||||||||||||||||||||| | |||| |||||||||    
T  11933431 aatcgtttaccaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttacttatttt 11933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 716
Target Start/End: Complemental strand, 11521264 - 11521218
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    ||||||||||||||||||||||||||||  ||| |||||||||||||    
T  11521264 taataaagtgataagtagagtatcgtatacacatggattgtcgtttc 11521218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 669 - 714
Target Start/End: Original strand, 10589737 - 10589781
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 714  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||    
T  10589737 gtaataaagtgataagt-gagtgtcgtatcaacagggattgtcgtt 10589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 730
Target Start/End: Complemental strand, 11700683 - 11700583
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||| ||||  ||||||||||| ||||  ||||| | |||||||| |||||| |||||||||||||| |||  ||||||| ||||||  ||||||||    
T  11700683 tgatggttggattagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca-agattgtcttttcgtttaaacaatt 11700585  T
Q  729 tg 730  Q
    ||    
T  11700584 tg 11700583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 813 - 858
Target Start/End: Original strand, 11935237 - 11935282
Alignment:
Q  813 tttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||    
T  11935237 tttggttgcagaaaagtaatcagtggttaggattcttcgaatcccc 11935282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 774 - 831
Target Start/End: Complemental strand, 20829696 - 20829640
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||||||||||| ||||    
T  20829696 caatttttatctgtttgcgacatagcaag-ttacttgtttttggttgcagaaatgtaa 20829640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 716
Target Start/End: Complemental strand, 22357632 - 22357559
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagag---tatcgtatcaacagggattgtcgtttc 716  Q
    |||||||| ||||| ||||| | |||||||||||||||||| ||   ||||||||| ||| |||||||||||||    
T  22357632 aagtgtactaaatcatttaccaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttc 22357559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 804
Target Start/End: Complemental strand, 12578223 - 12578193
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtt 804  Q
    |||||||||||||||||||||||||||||||    
T  12578223 caatttttatctgtttgcaacagagcaagtt 12578193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 771 - 804
Target Start/End: Original strand, 5679344 - 5679377
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtt 804  Q
    |||||||||||||||||||| |||||||||||||    
T  5679344 ttgcaatttttatctgtttgtaacagagcaagtt 5679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 716
Target Start/End: Original strand, 11093947 - 11094036
Alignment:
Q  628 ctgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    ||||||||||||| | || |||||||  ||||| ||||| | |||||||| ||||| ||||||| || |||| |||| ||||||||||||    
T  11093947 ctgatggtcggatttagataagtgtatcaaatcgtttaccaagtaataaaatgataggtagagtgtcatatccacagagattgtcgtttc 11094036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 692
Target Start/End: Original strand, 12318420 - 12318481
Alignment:
Q  631 atggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtat 692  Q
    ||||||||||  | ||||||||| ||||| || || | ||||||||||||||||||||||||    
T  12318420 atggtcggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 771 - 844
Target Start/End: Original strand, 19092434 - 19092505
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||||||||||||||||||| |||||||| ||  |||| || |||||||| |||||||||||  |||||||||||    
T  19092434 ttgcaatttttatctgtttacaacagagtaa-attacctg-ttttggttacagaaaagtaaatagcggttagga 19092505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 3e-66; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 629 - 869
Target Start/End: Complemental strand, 17102007 - 17101768
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||||||||||||  |||||||  ||||| ||||| | |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||     
T  17102007 tgatggtcggatatggaaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaata 17101908  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 828  Q
    || || |||||| ||||||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  17101907 tgtgttacttatatttgtaagtt-gacggtataaaagataggttccaatttttatctgtttgcaacagagcaagtttacctgtttttgattgcaaaaaag 17101809  T
Q  829 taagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||| ||||||||||  || ||||||| |||| |||||    
T  17101808 taagcagtggttaggattcatcaaatccccatgtttatatt 17101768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 645 - 869
Target Start/End: Complemental strand, 29382459 - 29382224
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  29382459 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttacttattttt 29382360  T
Q  745 gtaattttgacgatataaa-----------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 833  Q
    |||| ||||||||||||||           ||| || ||||||||||||||||||||||||| ||||||| ||| | |||||||||||||||||||||||    
T  29382359 gtaagtttgacgatataaaagttaatggttagaaagcttgcaatttttatctgtttgcaacatagcaagtgtacctatttttggttgcagaaaagtaagc 29382260  T
Q  834 agcggttaggatttttcgaatccccctgttcatatt 869  Q
    || |||||||||| ||| || ||||||||| |||||    
T  29382259 agtggttaggattcttcaaacccccctgtttatatt 29382224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 645 - 859
Target Start/End: Complemental strand, 24114380 - 24114157
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||  ||||| | |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||||||||    
T  24114380 caagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgttacttattttt 24114281  T
Q  745 gtaattttgacgatataaaagat-----------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 833  Q
    ||||  |||||||||||||||||           ||||||||||||||||||||||||| |||||||||||||| || |||||||  | |||||||||||    
T  24114280 gtaa-gttgacgatataaaagataagggttataaaggttgcaatttttatctgtttgcagcagagcaagtttacctg-ttttggtatctgaaaagtaagc 24114183  T
Q  834 agcggttaggatttttcgaatccccc 859  Q
    ||||||||||||| ||||||||||||    
T  24114182 agcggttaggattcttcgaatccccc 24114157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 669 - 840
Target Start/End: Original strand, 27659470 - 27659642
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |  | || ||||||||||||||  ||||||||||||||||||    
T  27659470 gtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttgtaa-gttgacgatataaaagata 27659568  T
Q  769 --ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 840  Q
      |||||||||||| |||| ||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  27659569 agggttgcaattttaatctatttgcaaaagagcaagtttacctgttttttgttgcagaaaattaagcagcggtt 27659642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 645 - 859
Target Start/End: Original strand, 24269599 - 24269822
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||  ||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||  | | | ||||||||    
T  24269599 caagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatttattttt 24269697  T
Q  745 gtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 833  Q
    |||| ||||||| ||||||| ||| |           ||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  24269698 gtaagtttgacggtataaaaaataagagtttgaatagttgcaatctttatctgtttgcaacagagta-gtttacctgtttttggttgcagaaaagtaagc 24269796  T
Q  834 agcggttaggatttttcgaatccccc 859  Q
    ||||||||||||| ||||||||||||    
T  24269797 agcggttaggattcttcgaatccccc 24269822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 669 - 857
Target Start/End: Complemental strand, 23893275 - 23893089
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||| ||||||||||||||||||| ||||||||  ||||||  ||| |||| |||||||   || |||||||||||||| ||||||| |||||||||||    
T  23893275 gtaatgaagtgataagtagagtatcatatcaacatagattgttcttttgtccgaacaattcttgttacttatttttgtaagtttgacggtataaaagata 23893176  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
     |||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||  ||  ||||||||| || |||||||    
T  23893175 -gttgcaatttttatctgtttgcaacaaagcaaatttacctg-ttttggttgcagaaaagtaactagtagttaggattctttgaatccc 23893089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 684 - 858
Target Start/End: Original strand, 16403952 - 16404125
Alignment:
Q  684 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaattttta 782  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||   || |||||||||||||| |||| ||| ||||||||  || ||||||||||||    
T  16403952 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagttttcacggtataaaagtgag-ttgcaattttta 16404050  T
Q  783 tctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    | ||||||||||||||| | ||||| | |||| || ||||||||| |||||||||||||||||| |||||||||||    
T  16404051 tttgtttgcaacagagcgaatttacctatttt-ggctgcagaaaaataagcagcggttaggattcttcgaatcccc 16404125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 639 - 860
Target Start/End: Original strand, 25226131 - 25226362
Alignment:
Q  639 atatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactt 738  Q
    ||||||||||||||| ||||| ||||  | ||||||||||||||||| |||||||||||  ||||||||| | ||||| |||||||||||||||| || |    
T  25226131 atatgacaagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacat 25226230  T
Q  739 atttttgtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaa 827  Q
    |||||| ||| ||||| ||||||||||  |||           || |||||||||| ||||||||| |||||||||||||||| | ||||||| | ||||    
T  25226231 atttttataagtttgaagatataaaagtaagggttagaaagtcttccaatttttatatgtttgcaatagagcaagtttacatg-tcttggttgtaaaaaa 25226329  T
Q  828 gtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||| |||  |||||||| || ||||||||||    
T  25226330 gtaagtagcaattaggattgtttgaatccccct 25226362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 19264067 - 19264256
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||  ||||||||||  | | |||||||  |||| || ||  ||||  ||| |||||||||||||| ||||| | |||||||| ||    
T  19264067 gtaataaagtgataagttaagtatcgtattcatatggattgttctttcatcaaattaattctcgttacttatttttgtaagtttgatgttataaaagtta 19264166  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
     |||| ||||||||||| ||||||||||||||||||||  | |||||||||| | ||| |||||||||||| ||| ||||||||||||||    
T  19264167 agttgtaatttttatctttttgcaacagagcaagtttatctatttttggttgaaaaaaggtaagcagcggtaaggctttttcgaatcccc 19264256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 646 - 858
Target Start/End: Complemental strand, 13315089 - 13314866
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    |||||||| | ||| ||||| | |||||||||||||||||| ||||||||||| ||| ||||| | ||||||||||||||||| |||| |||||||||      
T  13315089 aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttatttta- 13314991  T
Q  746 taattttgacgatataa---aagatag----------gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 832  Q
    ||| || ||||||||||   ||||||           |||||||||||||| |||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  13314990 taagtt-gacgatataataaaagataaacgttagagagttgcaatttttatatgtttgcaactgaacaaatttacctgtttttggttgcagaaaagtaag 13314892  T
Q  833 cagcggttaggatttttcgaatcccc 858  Q
    || |||||| |||| |||||||||||    
T  13314891 caacggttaagattcttcgaatcccc 13314866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 646 - 846
Target Start/End: Complemental strand, 18448639 - 18448428
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    |||||||| ||||| ||||| | |||||||||| |||| ||||| |||||||||| || ||||||||||| ||||||||||||  ||| ||||||||||     
T  18448639 aagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttattttta 18448540  T
Q  746 taattttgacgatataaaagata---gg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 832  Q
    |||  ||||||||||||||||||   ||          ||||| |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  18448539 taa-gttgacgatataaaagataaatggttagaaagtcttgcagtttttatctgtttgcaacagagcaag-ttacctgtttttggttgcataaaagtaag 18448442  T
Q  833 cagcggttaggatt 846  Q
    || |||||| ||||    
T  18448441 caacggttatgatt 18448428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 685 - 855
Target Start/End: Original strand, 18569107 - 18569276
Alignment:
Q  685 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaatttttat 783  Q
    ||||||||| |||| | |||||||||| |||||||  || ||||   || |||||||||||||| |||||||| ||||||||  || |||| ||||||||    
T  18569107 tagagtatcatatccatagggattgtcctttcgtcttaaaaattcttgttacttatttttgtaagttttgacggtataaaagtgag-ttgctatttttat 18569205  T
Q  784 ctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    |||||||||||| ||| ||||||| |||||| |||||||||||||||||||||||||| ||||||| |||||    
T  18569206 ctgtttgcaacatagcgagtttacttgtttt-ggttgcagaaaagtaagcagcggttacgattttttgaatc 18569276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 778 - 859
Target Start/End: Complemental strand, 24110623 - 24110543
Alignment:
Q  778 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    ||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  24110623 ttttatctgtttgcaacagaggaagtttatctgtttt-ggttgcagaaaagtaagcaggggttaggattattcgaatccccc 24110543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 786 - 869
Target Start/End: Complemental strand, 26394644 - 26394562
Alignment:
Q  786 gtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||| ||||||||||||| || |||||    
T  26394644 gtttgcaacaaagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattcttcgaatccccctatttatatt 26394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 743
Target Start/End: Complemental strand, 30806611 - 30806492
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgta-----tcaacagggattgtcgtttcgtccaaa 723  Q
    ||||||||||||  | ||||||||  ||||| |||| || ||||||||||||||||||||||||||||     || ||| ||||||||||||| ||||||    
T  30806611 tgatggtcggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaa 30806512  T
Q  724 caatttgcgtaacttatttt 743  Q
    |||||||||| |||||||||    
T  30806511 caatttgcgttacttatttt 30806492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 771 - 858
Target Start/End: Complemental strand, 44010984 - 44010898
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||||| |||||||| |||| |||||| ||||    
T  44010984 ttgcaatttttatatgtttgcaacagaacaagtt-acatgtttttggttgcagaagagtaagtagcggttaagattcttcgaaccccc 44010898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 649 - 742
Target Start/End: Original strand, 14075599 - 14075692
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||| ||||||||||| | |||| ||||||||||||||| ||||||||| ||| |||||||||||||  ||||||||| ||||| ||||||||    
T  14075599 tgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgttacttattt 14075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 743
Target Start/End: Original strand, 14528132 - 14528248
Alignment:
Q  627 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    |||||| |||||||  | ||||||| | ||||| ||||| | |||||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||    
T  14528132 actgatagtcggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaa 14528231  T
Q  727 tttgcgtaacttatttt 743  Q
     |  ||| |||||||||    
T  14528232 ctcacgttacttatttt 14528248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 771 - 875
Target Start/End: Original strand, 21314761 - 21314865
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatattc 870  Q
    ||||||| |||||||| || ||| ||||||||||| | ||||||| ||| || ||||||||| ||||||||||| | ||||||||||||| || ||||||    
T  21314761 ttgcaatatttatctgcttacaatagagcaagtttgcctgtttttagttacataaaagtaagtagcggttaggagtattcgaatccccctattgatattc 21314860  T
Q  871 ttcga 875  Q
    |||||    
T  21314861 ttcga 21314865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 771 - 859
Target Start/End: Complemental strand, 25182388 - 25182301
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||| || ||| |||||||| | || |||||||||    
T  25182388 ttgcaatttttatctatttgcaacagagcaag-ttacctgtttttggttgcagaaaaggaaacagtggttaggactctttgaatccccc 25182301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 632 - 743
Target Start/End: Original strand, 6884946 - 6885056
Alignment:
Q  632 tggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgc 731  Q
    |||||||||  | ||||||||| ||||| | |||   ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| ||||    
T  6884946 tggtcggattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaaacaacttgc 6885044  T
Q  732 gtaacttatttt 743  Q
    |  |||||||||    
T  6885045 gctacttatttt 6885056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 24904634 - 24904717
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||||| ||||| |  |||||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||    
T  24904634 caagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaatt 24904717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 669 - 743
Target Start/End: Original strand, 2637623 - 2637697
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |  ||| |||||||||    
T  2637623 gtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 727
Target Start/End: Original strand, 5850926 - 5851024
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    ||||||||||||  | |||||||||  |||| ||||| | |||||||||||||||||||||||||||||| |||  ||||||||||||  |||||||||    
T  5850926 tgatggtcggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaat 5851024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 629 - 726
Target Start/End: Original strand, 19786716 - 19786813
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||||||  ||||||| ||| ||||| ||||| | |||||||||||| ||||| |||||| |||| | ||||| |||||||||||||||||||    
T  19786716 tgatggtcggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaa 19786813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 770 - 846
Target Start/End: Original strand, 14626166 - 14626242
Alignment:
Q  770 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    |||||||||||||| |||||| |  |||||| |||||| | |||||||||||||||||||||||||| |||||||||    
T  14626166 gttgcaatttttatgtgtttggattagagcatgtttacctttttttggttgcagaaaagtaagcagcagttaggatt 14626242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 669 - 836
Target Start/End: Original strand, 17509271 - 17509447
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||||||||||||||||||||| |||| ||| |||||||  ||||||||||||||||  | | |||||||||| |||  |||||| |||||||  ||    
T  17509271 gtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttatttttataa-gttgacggtataaaaatta 17509369  T
Q  769 gg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagc 836  Q
     |           |||||||||| | |||||||||| ||||||||||||| ||||||| |||||| |||||||||||||    
T  17509370 agggttaaaagacttgcaattttcacctgtttgcaatagagcaagtttacctgttttt-gttgcaaaaaagtaagcagc 17509447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 669 - 744
Target Start/End: Original strand, 21314648 - 21314723
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||   ||| ||||||||||    
T  21314648 gtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttattttt 21314723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 645 - 711
Target Start/End: Original strand, 26008024 - 26008090
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtc 711  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||||| ||||||||||    
T  26008024 caagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatcaagagggattgtc 26008090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 625 - 741
Target Start/End: Original strand, 15238780 - 15238896
Alignment:
Q  625 ttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaac 724  Q
    ||||||||||||| ||  | ||||||||  ||||  ||||| | |||| ||| ||||||||||| ||||||||| ||| | |||||||||||||| ||||    
T  15238780 ttactgatggtcgaattaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaac 15238879  T
Q  725 aatttgcgtaacttatt 741  Q
    |||| |||| |||||||    
T  15238880 aattcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 655 - 727
Target Start/End: Original strand, 34497126 - 34497198
Alignment:
Q  655 aaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    ||||| ||||| | ||||||||||||| |||||||||||||||| | || || ||||||||||||||||||||    
T  34497126 aaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaat 34497198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 743
Target Start/End: Complemental strand, 25182543 - 25182428
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||||||||  |||||||| || ||||  ||||| |  ||||||||||| ||||||||||||||||  ||| |||||||| ||||||| ||||       
T  25182543 ctgatggtcggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgc 25182444  T
Q  728 ttgcgtaacttatttt 743  Q
    |||||| |||||||||    
T  25182443 ttgcgttacttatttt 25182428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 771 - 866
Target Start/End: Original strand, 34497255 - 34497348
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 866  Q
    ||||||||||||||| ||||||||| |||| | |||| ||  |||| |||||||||||||||||||||||||||||  | |||||||||| |||||    
T  34497255 ttgcaatttttatctttttgcaacatagcatg-ttacctg-gtttgcttgcagaaaagtaagcagcggttaggattccttgaatccccctattcat 34497348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 771 - 860
Target Start/End: Original strand, 7983720 - 7983807
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||||||||| ||| ||||||||  |  ||||  ||||||||||||||||||| ||| ||||||| || ||||||||||    
T  7983720 ttgcaatttttatctgtttgcgacatagcaagttgcctggttt--ggttgcagaaaagtaagcaacgggtaggattctttgaatccccct 7983807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 771 - 860
Target Start/End: Original strand, 13697994 - 13698080
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||| |||||||||||||||| |||| ||  ||||||||||||||||||||||| | ||| || | || ||||||||||    
T  13697994 ttgcaatttttatctctttgcaacagagcaag-ttacctg--tttggttgcagaaaagtaagcagtgattatgactctttgaatccccct 13698080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 682 - 743
Target Start/End: Original strand, 13697893 - 13697954
Alignment:
Q  682 aagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||  ||||| |||||||||    
T  13697893 aagtagagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttatttt 13697954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 771 - 840
Target Start/End: Original strand, 14528288 - 14528355
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 840  Q
    |||||||||||| |||||||||||| |||||||| || || ||| |||||||||||||||||||||||||    
T  14528288 ttgcaatttttagctgtttgcaacaaagcaagtt-acctggttt-ggttgcagaaaagtaagcagcggtt 14528355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 775 - 828
Target Start/End: Original strand, 19786874 - 19786926
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 828  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  19786874 aatttttatctgtttgcaacagagcaag-ttacatgtttttgattgtagaaaag 19786926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 650 - 719
Target Start/End: Complemental strand, 44011116 - 44011048
Alignment:
Q  650 gtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 719  Q
    |||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  44011116 gtaccaaatcgtttacgaagtaataaagtg-taagtagagtatcgtatccacatggattgtcgtttcgtc 44011048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 624 - 719
Target Start/End: Original strand, 17976599 - 17976694
Alignment:
Q  624 gttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 719  Q
    |||| |||| |||||||  | ||||||| | ||||| ||||  | |||||||||||||||||||||||||||||| |||  |||| ||||||||||    
T  17976599 gttattgattgtcggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtc 17976694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 649 - 712
Target Start/End: Complemental strand, 30783835 - 30783772
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcg 712  Q
    ||||| ||||| ||||| | |||||||||||||||||||||||||||||| |||  ||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 772 - 866
Target Start/End: Original strand, 9642018 - 9642110
Alignment:
Q  772 tgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 866  Q
    ||||||||||||||| ||||||||||||||  |||| || |||| |||||||||| || |||||||||||  ||| || |||||||||| |||||    
T  9642018 tgcaatttttatctgcttgcaacagagcaa-attacttg-ttttagttgcagaaatgttagcagcggttaaaattctttgaatccccctattcat 9642110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 777 - 835
Target Start/End: Original strand, 24644984 - 24645042
Alignment:
Q  777 tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcag 835  Q
    ||||||||| ||||||||| | |||  |||| |||||||||||||||||||||||||||    
T  24644984 tttttatctatttgcaacataacaaagttacctgtttttggttgcagaaaagtaagcag 24645042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 771 - 841
Target Start/End: Complemental strand, 30122114 - 30122046
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtta 841  Q
    |||||||||||||||||||| ||||||| ||||| || | |||| |||||||||||||||||||| |||||    
T  30122114 ttgcaatttttatctgtttgtaacagagtaagtt-acctatttt-ggttgcagaaaagtaagcagtggtta 30122046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 726
Target Start/End: Complemental strand, 24110753 - 24110672
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||  ||||| ||||| | |||||||| ||||||||||||||||||||| |||  |||| || ||| ||||||||||    
T  24110753 caagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccacaacgattttcattttgtccaaacaa 24110672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 669 - 742
Target Start/End: Complemental strand, 30122228 - 30122156
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||| ||||||||||||| |||| ||| |||||||| ||| |||||||||||| || | ||||||||    
T  30122228 gtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcattacttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 771 - 831
Target Start/End: Original strand, 6885096 - 6885155
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    |||||||||||||||||||| || |||| ||| |||| |||||||||||||||||| ||||    
T  6885096 ttgcaatttttatctgtttgtaatagagtaag-ttacctgtttttggttgcagaaatgtaa 6885155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 646 - 716
Target Start/End: Original strand, 31288360 - 31288429
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    |||||||| ||||| ||||| | ||||||||||| |||||| ||||||||||| | |||||||||| ||||    
T  31288360 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatccatagggattgtcttttc 31288429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 698
Target Start/End: Complemental strand, 5053019 - 5052966
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatc 698  Q
    ||||||||| ||||| |||||  |||||||||||| |||||||||||| |||||    
T  5053019 caagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatc 5052966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 1e-62; HSPs: 100)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 656 - 858
Target Start/End: Original strand, 11803092 - 11803293
Alignment:
Q  656 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 755  Q
    ||||||| || | |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||| ||||||    
T  11803092 aatctttaacaaagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttatttttgtaagtttgac 11803191  T
Q  756 gatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
      |||||||| ||||||| ||||||||  ||||||||||||||||||||||| || ||||||||||||| |||||| |||||||||||||| ||||||||    
T  11803192 agtataaaagttaggttgaaatttttagttgtttgcaacagagcaagtttacctg-ttttggttgcagagaagtaaccagcggttaggattattcgaatc 11803290  T
Q  856 ccc 858  Q
    |||    
T  11803291 ccc 11803293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 16059096 - 16058907
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | |||||||||||||||||| ||| |||||||| |||||||||||||||||  || |||||||||||||| ||||||| ||||||||      
T  16059096 gtaataaagttagtaagtagagtatcgtatccacatggattgtcctttcgtccaaacaattttagttacttatttttgtaagtttgacggtataaaagtg 16058997  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    || || |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  16058996 agttt-caatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagtaaagtaagcagctgttaggattcttcgaatcccc 16058907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 669 - 860
Target Start/End: Complemental strand, 1848301 - 1848100
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaa----- 763  Q
    |||||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||         
T  1848301 gtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttttgtaagtttgacgatataaaaatta 1848202  T
Q  764 ------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
          ||| || |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||| |||| |||||||| |    
T  1848201 agggttagagagcttgcaatttttatctgtttgaaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagcggttatgattcttcgaatctc 1848103  T
Q  858 cct 860  Q
    |||    
T  1848102 cct 1848100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 633 - 856
Target Start/End: Original strand, 13418523 - 13418744
Alignment:
Q  633 ggtcggatatgacaagtgtacgaaatcttttactaggtaataaa-gtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgc 731  Q
    ||||||||||| ||||||||| || || || || | |||||||| |||||||||||||||||||||| | |||||||||| ||||||||||||| ||  |    
T  13418523 ggtcggatatggcaagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtc 13418621  T
Q  732 gtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    || |||||||||| ||| || |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| |||||||    
T  13418622 gttacttatttttttaagtt-gacggtataaaagttaggttgcaatttttatctgtttgcaacagagcaagtttacctg-ttttgattgcagcaaagtaa 13418719  T
Q  832 gcagcggttaggatttttcgaatcc 856  Q
    ||||||||||||||| || ||||||    
T  13418720 gcagcggttaggattctttgaatcc 13418744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 628 - 846
Target Start/End: Complemental strand, 8979121 - 8978892
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    ||||||||||||||||  |||||||| ||||| ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||    
T  8979121 ctgatggtcggatatggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaat 8979022  T
Q  728 ttgcgtaacttatttttgtaattttgacgatataaaagat---agg--------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 816  Q
    | || | ||||||||| |||| |||||| |||||||||||   |||        |||||||||| |||||||||||| ||| ||||||||| ||||||||    
T  8979021 tcgcattacttattttggtaagtttgacaatataaaagataaaagggttaggatttgcaattttcatctgtttgcaatagaacaagtttacctgtttttg 8978922  T
Q  817 gttgcagaaaagtaagcagcggttaggatt 846  Q
    ||||||||||| |||||||| |||||||||    
T  8978921 gttgcagaaaaataagcagcagttaggatt 8978892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 661 - 855
Target Start/End: Complemental strand, 39273257 - 39273053
Alignment:
Q  661 tttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatat 760  Q
    ||||||| |||||||||||||||||||||||||||||  | | |||||||||||||||||||| |||||| || |||||||||||||| |||||||||||    
T  39273257 tttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgtaagtttgacgatat 39273158  T
Q  761 aaaagat----------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttc 850  Q
    ||||| |          | ||||||| ||| |||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||    
T  39273157 aaaagttaagggttataaagttgcaaatttaatctatttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttaggatccttc 39273058  T
Q  851 gaatc 855  Q
    |||||    
T  39273057 gaatc 39273053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 669 - 846
Target Start/End: Complemental strand, 3329732 - 3329543
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacg-ata-taaaaga 766  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||| |||||||||||||| ||| ||| ||| | |||||    
T  3329732 gtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgttacttatttttgtaagtttaacgtataatgaaaga 3329633  T
Q  767 tagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    || |          ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3329632 taagggttagagagttgcaatttttatctgtttgcaacatagcaagtttacttgtttttggttgcagaaaagtaagcagcggttaggatt 3329543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 643 - 858
Target Start/End: Original strand, 6042460 - 6042675
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||  ||||| ||||| | |||||||| || |||||||||||||||||| |||| | |||||||||||| |||||||||||||| ||||||||    
T  6042460 gacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgttacttattt 6042558  T
Q  743 ttgtaattttgacgatataa---aagatag--gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcg 837  Q
    ||   | ||||||| |||||   |||||||  |||||||||||||| |||||||||||||| |||||||| | ||||||||||||||||| |||||||||    
T  6042559 tt---agtttgacggtataataaaagatagatgttgcaatttttatatgtttgcaacagag-aagtttacctttttttggttgcagaaaaataagcagcg 6042654  T
Q  838 gttaggatttttcgaatcccc 858  Q
    ||||||||| || ||||||||    
T  6042655 gttaggattctttgaatcccc 6042675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 670 - 843
Target Start/End: Original strand, 17077154 - 17077325
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagatag 769  Q
    ||||||||||||| ||||||||| ||||| |  ||||||||||||||||||||||||||   || ||||||||||||||  |||||| |||||||| | |    
T  17077154 taataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgttacttatttttgtaa-gttgacggtataaaagttgg 17077252  T
Q  770 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 843  Q
    |||||||||||||||||||||||| |||| |||||||| || ||||| ||||||||||||||||||||||||||    
T  17077253 gttgcaatttttatctgtttgcaatagagtaagtttacctg-ttttgtttgcagaaaagtaagcagcggttagg 17077325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 645 - 869
Target Start/End: Original strand, 2563819 - 2564054
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||| |    
T  2563819 caagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttatttct 2563917  T
Q  745 gtaattttgacgatataa---aagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    |||| ||  |||||||||   |||||| |          ||| ||||||||||||||||||||||||||||||||| || ||| | ||||||||||||||    
T  2563918 gtaagttc-acgatataataaaagataagggttagagagttgaaatttttatctgtttgcaacagagcaagtttacctgctttagtttgcagaaaagtaa 2564016  T
Q  832 gcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    | ||||||||||||  |||||||||||||||| |||||    
T  2564017 gtagcggttaggatccttcgaatccccctgtttatatt 2564054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 4449005 - 4449192
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||| ||||| ||||| ||||||| |||| ||| ||||||||||||   || |||||||||||||| ||||||| |||||||| ||    
T  4449005 gtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaattcttgttacttatttttgtaagtttgacggtataaaag-ta 4449103  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||| |||||||||||||||||| |||||| | ||||| |  ||||||||||| |||||||| |||||||||| ||| || ||||||||    
T  4449104 ggttgaaatttttatctgtttgcagcagagcgaatttacct-attttggttgcaaaaaagtaaacagcggttagaattctttgaatcccc 4449192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 630 - 765
Target Start/End: Complemental strand, 13759973 - 13759838
Alignment:
Q  630 gatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaattt 729  Q
    ||||||||||||||  |||||||| ||||| ||||| |  |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| ||     
T  13759973 gatggtcggatatggtaagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttc 13759874  T
Q  730 gcgtaacttatttttgtaattttgacgatataaaag 765  Q
    |||| |||||||||||||| ||||||||||||||||    
T  13759873 gcgttacttatttttgtaagtttgacgatataaaag 13759838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 13277528 - 13277716
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||| |||||||| |||||||||||||| ||| |||||||| |||||||| |||||||   || | |||||||||||| ||| ||| |||||||| ||    
T  13277528 gtaatacagtgataaatagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttgtaagtttaacggtataaaagtta 13277627  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||||||| | ||||| | || || || ||||||||| ||||||||||| |||| |||||||| || ||||||||    
T  13277628 ggttgcaatttttatctgtttgctatagagcgaattgacctg-ttttggttgtagaaaagtaagtagcgattaggattctttgaatcccc 13277716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 774 - 869
Target Start/End: Original strand, 5108706 - 5108801
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||||||| || |||||    
T  5108706 caatttttatctgtttgcaagagagcaagtttacttgattttggttgcagaaaagtaagcagcggttaggattctttgaatccccctatttatatt 5108801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 639 - 857
Target Start/End: Original strand, 20582254 - 20582479
Alignment:
Q  639 atatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactt 738  Q
    ||||| |||| |||| ||||| ||||| |  ||||||||||||||||   |||||||||| |||||||| |||||||| |||| ||||||  ||| ||||    
T  20582254 atatggcaagggtaccaaatcgtttaccaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttcttccatacaattctcgttactt 20582350  T
Q  739 atttttgtaattttgacgatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaa 826  Q
    | |||| ||| || ||||||||||||| || |            ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  20582351 aattttataagtt-gacgatataaaaggtaagggttaaaaagatttgcaatttttatctatttgcaacagagcaagtttacctgtttt-ggttgcagaaa 20582448  T
Q  827 agtaagcagcggttaggatttttcgaatccc 857  Q
    |||||||||| ||||||||| ||||||||||    
T  20582449 agtaagcagcagttaggattcttcgaatccc 20582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 645 - 858
Target Start/End: Complemental strand, 8054156 - 8053937
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | ||||||||||||||| |||||||||||||| ||| | |||||||||   |||||||||||  | | ||||||||||    
T  8054156 caagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttattttt 8054060  T
Q  745 gtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 833  Q
    ||||  |||||||||||||||||| |           ||| || |||||||| ||||||| | ||||||||||| || ||||||||||||||||||||||    
T  8054059 gtaa-gttgacgatataaaagataagagttaaaagacttgtaaattttatctatttgcaatatagcaagtttacctg-ttttggttgcagaaaagtaagc 8053962  T
Q  834 agcggttaggatttttcgaatcccc 858  Q
    ||| ||||||||| || ||||||||    
T  8053961 agcagttaggattctttgaatcccc 8053937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 645 - 768
Target Start/End: Complemental strand, 8054587 - 8054465
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||   || ||||||||||    
T  8054587 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattttt 8054488  T
Q  745 gtaattttgacgatataaaagata 768  Q
    ||||  ||||||||||||||||||    
T  8054487 gtaa-gttgacgatataaaagata 8054465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 645 - 744
Target Start/End: Complemental strand, 11221262 - 11221163
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||  ||||||||||||| ||||||||||    
T  11221262 caagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattttt 11221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 645 - 862
Target Start/End: Complemental strand, 18369078 - 18368849
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||  ||||| | |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||   || ||||||||||    
T  18369078 caagtgtactaaatagtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattttt 18368979  T
Q  745 gtaattttgac-gatataaaagata---ggt----------tgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagta 830  Q
     |||  |||||  ||||||||||||   |||          |||||||||||||||||||||||| |||||| |||| || ||||||||| |||||||||    
T  18368978 ataa-gttgacaaatataaaagataaagggttagaaagtcgtgcaatttttatctgtttgcaacaaagcaag-ttacctgcttttggttgtagaaaagta 18368881  T
Q  831 agcagcggttaggatttttcgaatccccctgt 862  Q
    || | |||||||||||  | ||||||||||||    
T  18368880 agaaacggttaggattccttgaatccccctgt 18368849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 629 - 743
Target Start/End: Original strand, 31492915 - 31493029
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||  ||||| ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  31492915 tgatggtcggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatt 31493014  T
Q  729 tgcgtaacttatttt 743  Q
    ||  | |||||||||    
T  31493015 tgttttacttatttt 31493029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 625 - 742
Target Start/End: Complemental strand, 9864444 - 9864327
Alignment:
Q  625 ttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaac 724  Q
    ||||| ||||||||||  | ||||||||| ||||  ||||| | ||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||    
T  9864444 ttactcatggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaac 9864345  T
Q  725 aatttgcgtaacttattt 742  Q
    ||||||||| ||||||||    
T  9864344 aatttgcgttacttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 669 - 846
Target Start/End: Complemental strand, 17191276 - 17191100
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | |||||||||||||||||| | |||| ||||| |||| ||| ||| |||  ||| || ||||||| ||| ||||| | |||||||| |    
T  17191276 gtaataaagttagtaagtagagtatcgtatccataggggttgtcctttcatccgaacgattctcgttacgtatttttttaagtttgatggtataaaag-t 17191178  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    || ||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||| ||| || | ||||||||    
T  17191177 ag-ttgcaatttttatctgtttccaacagagcgattttacctgtttttggttgcagaaaagaaagtagtgattaggatt 17191100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 645 - 726
Target Start/End: Complemental strand, 10587122 - 10587041
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  10587122 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaa 10587041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 669 - 857
Target Start/End: Complemental strand, 13289482 - 13289294
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | |||||| | ||| ||||| ||| |||||||| |||| ||| |||||||    | | |||||||||||| ||||||| |||||||||     
T  13289482 gtaataaagttagtaagtataatattgtatccacatggattgtcctttcctccgaacaattctaattaattatttttgtaagtttgacggtataaaagaa 13289383  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
    || ||||||||||| ||||||||||| || || | ||||| ||||||||||||||||||| |||  ||||||||| ||| ||||||||||    
T  13289382 ag-ttgcaatttttttctgtttgcaatagtgcgaatttacctgtttttggttgcagaaaattaataagcggttagaattcttcgaatccc 13289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 777 - 857
Target Start/End: Original strand, 4785985 - 4786064
Alignment:
Q  777 tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
    ||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4785985 tttttatctatttgcaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcggttaggattcttcgaatccc 4786064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 771 - 859
Target Start/End: Original strand, 9131049 - 9131136
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    ||||||||||||| ||||||||| |||||||||| || |||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  9131049 ttgcaatttttatttgtttgcaatagagcaagttaac-tgtttttggttgcaaaaaagtaagctgcggttaggattcttcgaatccccc 9131136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 771 - 854
Target Start/End: Original strand, 7397280 - 7397362
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaat 854  Q
    ||||||||||||||||||||||||| | ||||||  | |||||||||||||||||||||||||||||||||||||| |||||||    
T  7397280 ttgcaatttttatctgtttgcaacaaaacaagttatc-tgtttttggttgcagaaaagtaagcagcggttaggattcttcgaat 7397362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 645 - 744
Target Start/End: Complemental strand, 9731725 - 9731626
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||  | ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| |||| ||||||||||    
T  9731725 caagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttacttattttt 9731626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 629 - 855
Target Start/End: Original strand, 16365690 - 16365927
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||| |||||||  || |||||||| ||||| ||||| | |||||||||| | ||||||||||||||||| ||| |||||||||||| || |||||||||    
T  16365690 tgatagtcggattagaaaagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaatt 16365789  T
Q  729 tgcgtaacttatttttgtaattttgacgat---ataaaaga---------tag---gttgcaatttttatctgtttgcaacagagcaagtttacatgttt 813  Q
     |||| ||||||||||   |  ||||||||   ||||||||         |||    || ||||||| |||| |||||| | ||||||| ||||||||||    
T  16365790 cgcgttacttattttt---aagttgacgatataataaaagagttaaggtttagagattttcaattttgatctatttgcatctgagcaag-ttacatgttt 16365885  T
Q  814 ttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    ||||||||| ||||||||||||||||||||||| ||||||||    
T  16365886 ttggttgcaaaaaagtaagcagcggttaggattcttcgaatc 16365927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 771 - 860
Target Start/End: Original strand, 18662579 - 18662666
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||| |||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| | |||||||||||||    
T  18662579 ttgcaatttttatttgtttgcaacagagcaagtt-acctgtttt-ggttgcagaaatgtaagcagcggttaggactcttcgaatccccct 18662666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 629 - 725
Target Start/End: Original strand, 7318258 - 7318354
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 725  Q
    ||||||||||||  | ||||||||| | ||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  7318258 tgatggtcggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaaca 7318354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 669 - 832
Target Start/End: Complemental strand, 7492337 - 7492163
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgat---ataaaag 765  Q
    |||||||| ||||||||||||||||||||| ||| ||||||| ||||||| |||||||||||| | ||||||||||   ||||||| |||   |||||||    
T  7492337 gtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttattttt---attttgatgatataataaaag 7492241  T
Q  766 a---------tag---gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 832  Q
    |         |||    |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  7492240 agttaagggttagagatttgcaatttttaactgtttgcaacagagcaag-ttacctgtttttggttgcagaaaagtaag 7492163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 771 - 858
Target Start/End: Original strand, 8877559 - 8877646
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaa-agtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||||||||||||||||||||| |  ||||||||||| ||| |||||||||||||||||||| || ||||||||    
T  8877559 ttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgcaaaaatagtaagcagcggttaggattctttgaatcccc 8877646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 627 - 742
Target Start/End: Original strand, 16306677 - 16306792
Alignment:
Q  627 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||||||||  ||||||||||  ||||| ||||  | |||||||||||||||||||||||||||||| ||| ||||| || |||| || ||||||    
T  16306677 actgatggtcggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaa 16306776  T
Q  727 tttgcgtaacttattt 742  Q
    ||||| | ||||||||    
T  16306777 tttgcattacttattt 16306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 776 - 859
Target Start/End: Complemental strand, 17153109 - 17153027
Alignment:
Q  776 atttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| || | || |||||||||    
T  17153109 atttttatctgtttgcaacaaagcaagtt-acctgtttttggttgcagaaaagtaagcagcggttatgactctttgaatccccc 17153027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 645 - 728
Target Start/End: Complemental strand, 23100050 - 23099967
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  23100050 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 23099967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 646 - 743
Target Start/End: Original strand, 3734598 - 3734695
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||| |||| |||||| | |||||||||||||||||||||||||||||| ||| | ||||| |||| ||||||||||||  ||| |||||||||    
T  3734598 aagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttacttatttt 3734695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 18495358 - 18495471
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||  ||||||| |||||||||||||||||| ||||  ||||| |  ||||||||||||||||| ||||||||    
T  18495358 tgatggtcggattagtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaatgtatccatggggattgtcgtttcgtctaaacaatt 18495457  T
Q  729 tgcgtaacttattt 742  Q
    || || ||||||||    
T  18495458 tgtgttacttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 673 - 742
Target Start/End: Original strand, 18662470 - 18662539
Alignment:
Q  673 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  ||| ||||||||    
T  18662470 taaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 650 - 726
Target Start/End: Complemental strand, 8313488 - 8313412
Alignment:
Q  650 gtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    |||| ||||| ||||| | |||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaa 8313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 5108567 - 5108649
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||||  ||||| | ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  5108567 caagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 5108649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 771 - 858
Target Start/End: Complemental strand, 10586984 - 10586898
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||| ||||| || | || ||||||||    
T  10586984 ttgcaatttttatctgtttgcaacagagcaag-atacatgtttctggttgcaaaaaagtaagcagtggttaagactctttgaatcccc 10586898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 771 - 842
Target Start/End: Complemental strand, 16297794 - 16297724
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttag 842  Q
    ||||||||||||| |||||||||||||| ||||| || | ||||||||||||||||||||||||||||||||    
T  16297794 ttgcaatttttatatgtttgcaacagagtaagtt-acctatttttggttgcagaaaagtaagcagcggttag 16297724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 624 - 743
Target Start/End: Complemental strand, 17153273 - 17153154
Alignment:
Q  624 gttactgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    |||||||||||||||||  || |||||||  ||||  ||||| | |||| ||||||||||||||||||||||||| |||  ||||||||||||||| |||    
T  17153273 gttactgatggtcggattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaa 17153174  T
Q  724 caatttgcgtaacttatttt 743  Q
    ||  | |||| |||||||||    
T  17153173 cagctcgcgttacttatttt 17153154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 743
Target Start/End: Original strand, 1584530 - 1584642
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| || || ||||| | ||||||||||||||||| |||||||||||| ||||||||||| |||||||| |||||| |    
T  1584530 tgatggtcggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtctaaacaaat 1584627  T
Q  729 tgcgtaacttatttt 743  Q
     |||| |||||||||    
T  1584628 cgcgttacttatttt 1584642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 628 - 742
Target Start/End: Original strand, 5530005 - 5530119
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||||||||  | || |||||| ||||  ||||| | |||||||| ||||||||| || |||||||| |||| |||| ||||||||||||||||||    
T  5530005 ctgatggtcggattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaat 5530104  T
Q  728 ttgcgtaacttattt 742  Q
    ||| || ||||||||    
T  5530105 ttgtgttacttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 669 - 745
Target Start/End: Original strand, 17203049 - 17203124
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    |||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||  |||| |||||||||||    
T  17203049 gtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttatttttg 17203124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 669 - 744
Target Start/End: Original strand, 4785861 - 4785936
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||||| || ||  ||| ||||||||||    
T  4785861 gtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt 4785936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 669 - 744
Target Start/End: Original strand, 4818861 - 4818936
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||||| || ||  ||| ||||||||||    
T  4818861 gtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt 4818936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 724
Target Start/End: Original strand, 9574408 - 9574487
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaac 724  Q
    ||||||||| ||||| ||||| | | |||||||||||||||||||||||||||| |||| |||||| |||||||| ||||    
T  9574408 caagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaac 9574487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 771 - 859
Target Start/End: Original strand, 19153434 - 19153522
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccc 859  Q
    ||||||||||||||||||||||||| | |||| |||| ||||||||||||||||||||||| || |||||  |||||| ||||||||||||    
T  19153434 ttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcagaaaagtaa-catcggttagaggattcttcgaatccccc 19153522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 771 - 859
Target Start/End: Original strand, 20752833 - 20752921
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccc 859  Q
    ||||||||||||||||||||||||| | |||| |||| ||||||||||||||||||||||| || |||||  |||||| ||||||||||||    
T  20752833 ttgcaatttttatctgtttgcaacataacaag-ttacctgtttttggttgcagaaaagtaa-catcggttagaggattcttcgaatccccc 20752921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 771 - 860
Target Start/End: Original strand, 7318412 - 7318501
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga-tttttcgaatccccct 860  Q
    |||||||||||||||||||||||||||||||| |||| | |||||||||||||||||| || || || |||||| | ||| ||||||||||    
T  7318412 ttgcaatttttatctgtttgcaacagagcaag-ttacttctttttggttgcagaaaaggaaacaacgattaggactcttttgaatccccct 7318501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 771 - 857
Target Start/End: Complemental strand, 9731587 - 9731502
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
    ||||||||||||||| | || |||| |||||||| || |||||||||||||| |||||||||||||||||||| ||  |||||||||    
T  9731587 ttgcaatttttatctatgtgtaacatagcaagtt-acctgtttttggttgcataaaagtaagcagcggttagggttgatcgaatccc 9731502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 9916550 - 9916664
Alignment:
Q  629 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||||||| | | ||||| ||| ||||| ||||| | |||||||||| ||||||||||||||||||| ||| ||||||| |||||  |||||||||    
T  9916550 tgatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaat 9916649  T
Q  728 ttgcgtaacttattt 742  Q
     || || ||||||||    
T  9916650 atgtgttacttattt 9916664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 9924462 - 9924576
Alignment:
Q  629 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||||||| | | ||||| ||| ||||| ||||| | |||||||||| ||||||||||||||||||| ||| ||||||| |||||  |||||||||    
T  9924462 tgatggtcggatttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttcaaccaaacaat 9924561  T
Q  728 ttgcgtaacttattt 742  Q
     || || ||||||||    
T  9924562 atgtgttacttattt 9924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 771 - 844
Target Start/End: Original strand, 3734735 - 3734806
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    |||||| ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||  ||||||||    
T  3734735 ttgcaaattttatctgtttgcaacagagcaag-ttacctg-ttttggttgcagaaaagtaagcaatggttagga 3734806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 742
Target Start/End: Original strand, 4579099 - 4579195
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||| | ||||| ||||||| ||||||| |||||||||||||||||||||| | || ||||||| ||| |||||||||||| | || ||||||||    
T  4579099 caagtgttccaaatcgtttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgttacttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 742
Target Start/End: Original strand, 9500445 - 9500542
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||| ||||| ||||| | ||||||| ||||| | |||||||||||||| ||| ||||||| |||||||| |||||||| || | ||||||||    
T  9500445 caagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattacttattt 9500542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 775 - 860
Target Start/End: Original strand, 17829712 - 17829795
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||||||||||| |||||| || |||||| ||||| |||||| ||||||| ||||| |||| |||||||||||||    
T  17829712 aatttttatctgtttgcaacagaacaagttaac-tgtttt-ggttggagaaaattaagcagtggttaagattcttcgaatccccct 17829795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 669 - 742
Target Start/End: Original strand, 18467476 - 18467549
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    |||||||||||||||||| ||||| ||||| ||| |||||||||||||||| |||||||||  || ||||||||    
T  18467476 gtaataaagtgataagtaaagtattgtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 670 - 742
Target Start/End: Original strand, 18466031 - 18466103
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    |||||||||||||||||||||| |||||| | ||||||| |||||||  |||||||||||| || ||||||||    
T  18466031 taataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttacttattt 18466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 669 - 844
Target Start/End: Complemental strand, 22067300 - 22067128
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt-gtaattttgacgatataaaaga 766  Q
    |||||||||| | ||||||||||||| |||| | |||||||||| |||||||| | |||||   || | || ||||| |||| ||| ||||||||||||     
T  22067300 gtaataaagttagtaagtagagtatcatatccatagggattgtcctttcgtccgatcaattctagttagttttttttggtaagtttaacgatataaaagt 22067201  T
Q  767 taggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||    ||||||||||| ||| ||||||| ||  | ||||| || ||||||||||||||||||||||| |||||||||    
T  22067200 ta----gcaatttttatatgtctgcaacaaagagaatttacctg-ttttggttgcagaaaagtaagcaacggttagga 22067128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 742
Target Start/End: Complemental strand, 10584586 - 10584487
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||| ||||| ||||  | |||||||||||||||| | ||||||||||| ||| ||||||||||||| |  |||||||| | || ||||||||    
T  10584586 gacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 716
Target Start/End: Original strand, 10937603 - 10937674
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    ||||||||  ||||| ||||| | |||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  10937603 caagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 10937674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 728
Target Start/End: Complemental strand, 16297918 - 16297835
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||||  ||||| | ||||||| |||||||||||| ||||||||  ||| |||||||| ||||||||||||||||    
T  16297918 caagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaatt 16297835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 743
Target Start/End: Original strand, 1587666 - 1587780
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||| ||||| ||||| ||||||| ||| ||||||||||| ||||||||| |||| |||  ||| || ||||| |||||||||||    
T  1587666 tgatggtcggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaatt 1587765  T
Q  729 tgcgtaacttatttt 743  Q
     |||| || ||||||    
T  1587766 cgcgttacctatttt 1587780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 723
Target Start/End: Complemental strand, 2350845 - 2350767
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    ||||||||| ||||| ||||| | |||||||| || |||||||| ||||||||| ||| |||||||||||| |||||||    
T  2350845 caagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaa 2350767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 18449226 - 18449340
Alignment:
Q  629 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||||||| | | ||||||||  ||||  ||||| | |||||||||||| ||||| | ||||||||| | |||||||||||||||  |||||||||    
T  18449226 tgatggtcggatttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaat 18449325  T
Q  728 ttgcgtaacttattt 742  Q
    | |||| ||||||||    
T  18449326 tggcgttacttattt 18449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 771 - 860
Target Start/End: Complemental strand, 8313352 - 8313265
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||||||| |||||||||||| |||| |  ||||||||||||||||||||||| |  |||||| | || ||||||||||    
T  8313352 ttgcaatttttatctgttttcaacagagcaag-ttacct-attttggttgcagaaaagtaagcaacatttaggactcttggaatccccct 8313265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 771 - 860
Target Start/End: Complemental strand, 14195932 - 14195845
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    |||||||||||||||||||||||||||||||| |||  || ||||| ||||||||| ||||||| |  ||| |||| |||||||||||||    
T  14195932 ttgcaatttttatctgtttgcaacagagcaag-ttatctg-ttttgattgcagaaatgtaagcaacaattaagattcttcgaatccccct 14195845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 629 - 726
Target Start/End: Complemental strand, 14755244 - 14755147
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||||||  ||||||||||| ||||| ||||  | ||| |||||||| |||||||||||| |||| ||| | ||||| |||||||| ||||||    
T  14755244 tgatggtcggattagacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccacaagtattgttgtttcgtctaaacaa 14755147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 673 - 742
Target Start/End: Complemental strand, 22339381 - 22339312
Alignment:
Q  673 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    |||||||||||||| ||||||| |||  || ||||||||||||||||||||||||| || | ||||||||    
T  22339381 taaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgccttacttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 772 - 853
Target Start/End: Original strand, 31493066 - 31493145
Alignment:
Q  772 tgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaa 853  Q
    |||||||||||||||||||||||||||  || |||| || ||||||||| ||||| ||||||| ||||||||||| ||||||    
T  31493066 tgcaatttttatctgtttgcaacagagtcag-ttacttg-ttttggttgtagaaatgtaagcaacggttaggattcttcgaa 31493145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 788 - 857
Target Start/End: Original strand, 4818995 - 4819065
Alignment:
Q  788 ttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca--gcggttaggatttttcgaatccc 857  Q
    |||||| |||||||||| || | ||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  4818995 ttgcaatagagcaagtt-acctatttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 4819065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 719
Target Start/End: Original strand, 4986554 - 4986630
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 719  Q
    ||||||||||| ||||| ||||| | ||||||||||| | |||||||||| ||| | ||| ||||||||||||||||    
T  4986554 gacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtc 4986630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 719
Target Start/End: Original strand, 4990652 - 4990728
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtc 719  Q
    ||||||||||| ||||| ||||| | ||||||||||| | |||||||||| ||| | ||| ||||||||||||||||    
T  4990652 gacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtc 4990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 744
Target Start/End: Original strand, 12329666 - 12329782
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||||||||  | ||| ||||| ||||| ||||| | |||| ||| |||||| |||||||| ||||| ||| |||||||||||| | ||||| |||    
T  12329666 ctgatggtcggattaggcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttttgcccaaataat 12329765  T
Q  728 ttgcgtaacttattttt 744  Q
      |||| ||||||||||    
T  12329766 ccgcgttacttattttt 12329782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 742
Target Start/End: Original strand, 21230338 - 21230410
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||| ||||||||||||||||||||  | ||||||| |||||||||| || ||||||| || ||||||||    
T  21230338 taataaaatgataagtagagtatcgtattcatagggattatcgtttcgtctaagcaatttgtgttacttattt 21230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 669 - 728
Target Start/End: Complemental strand, 3191133 - 3191074
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||||||||| ||||| |||||  |||| | |||||||||||||||||||||||||||    
T  3191133 gtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaatt 3191074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 778 - 853
Target Start/End: Original strand, 6006084 - 6006157
Alignment:
Q  778 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaa 853  Q
    ||||||||||||||||||||| ||||| || |||||| ||| ||||||||||||| |||||||| |||| ||||||    
T  6006084 ttttatctgtttgcaacagagtaagtt-acctgtttt-ggtggcagaaaagtaagtagcggttaagattgttcgaa 6006157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 775 - 846
Target Start/End: Complemental strand, 8293997 - 8293928
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||| ||  |||| ||||||||||    
T  8293997 aatttttatctgtttgcaacagagcaag-ttacctg-ttttggttgcagaaatgttcgcagtggttaggatt 8293928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 771 - 826
Target Start/End: Original strand, 10648717 - 10648770
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaa 826  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  10648717 ttgcaatttttatctgtttgcaacaaagcaag-ttacatg-ttttggttgcagaaa 10648770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 669 - 743
Target Start/End: Original strand, 12181633 - 12181708
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgt-ccaaacaatttgcgtaacttatttt 743  Q
    |||||||||||| |||||||||| |||||| ||| | ||||||||||||| |||||||||| | || |||||||||    
T  12181633 gtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaattcgagttacttatttt 12181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 643 - 714
Target Start/End: Complemental strand, 15303720 - 15303650
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 714  Q
    ||||||||||| ||||| ||||| ||||||||||||| |||||| ||||||||||| ||| | |||||||||    
T  15303720 gacaagtgtaccaaatcgtttaccaggtaataaagtg-taagtaaagtatcgtatctacacgaattgtcgtt 15303650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 645 - 716
Target Start/End: Original strand, 23093311 - 23093381
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    ||||||||| ||||| ||||||| ||||||||||| |||||||||||| ||||| ||  |||||||||||||    
T  23093311 caagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtattgtatctacgtggattgtcgtttc 23093381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 771 - 857
Target Start/End: Original strand, 140255 - 140339
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
    |||| ||||||||||||||||||||||||||| |||| || |||| |||||||||| || || |||||| |||||| || |||||||    
T  140255 ttgccatttttatctgtttgcaacagagcaag-ttacctg-ttttagttgcagaaatgttagtagcggtcaggattctttgaatccc 140339  T

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Target: chr7; HSP #88
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 771 - 838
Target Start/End: Original strand, 1587821 - 1587884
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcgg 838  Q
    ||||||||||||| ||||||||||||||||||||  |    | |||||||||||||||||||||||||    
T  1587821 ttgcaatttttatttgtttgcaacagagcaagttacc----tcttggttgcagaaaagtaagcagcgg 1587884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 743
Target Start/End: Original strand, 6013594 - 6013692
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||  | ||| | |||||||||||||||||||||||| ||| ||||| || |||  ||||||||||| || | |||||||||    
T  6013594 caagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttacttatttt 6013692  T

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Target: chr7; HSP #90
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 743
Target Start/End: Original strand, 15869596 - 15869694
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||  ||||| ||||| | ||||||||||||||||||||||||||||||  || ||||| | |||| ||| ||| | | ||||| |||||||||    
T  15869596 caagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtctgcgttacttatttt 15869694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 716
Target Start/End: Complemental strand, 21912553 - 21912507
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||    
T  21912553 taataaagtgataagttgagtatcgtatctacggggattgtcgtttc 21912507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 5797496 - 5797609
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||  |||||  |||| | |||||||||| ||||||||||||||||||| ||| | ||||||   ||  ||||||||||    
T  5797496 tgatggtcggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccacatgaattgtcaaatcaaccaaacaatt 5797595  T
Q  729 tgcgtaacttattt 742  Q
    || || ||||||||    
T  5797596 tgtgttacttattt 5797609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 778 - 859
Target Start/End: Original strand, 15869740 - 15869820
Alignment:
Q  778 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||||||||||| |||  ||||| || |||||||||||||| |||||||| || ||||||||| | || |||||||||    
T  15869740 ttttatctgtttgcaatagaaaaagtt-acctgtttttggttgcataaaagtaaacaacggttaggactctttgaatccccc 15869820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 649 - 698
Target Start/End: Original strand, 21227184 - 21227233
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatc 698  Q
    ||||| ||||| ||||| | ||||||||||||||||||||||||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 655 - 743
Target Start/End: Original strand, 10648589 - 10648677
Alignment:
Q  655 aaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||| ||||| | ||||||||||||||| ||||||||| |||   || ||||||||||||| || |||||||| | || |||||||||    
T  10648589 aaatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttt 10648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 728
Target Start/End: Original strand, 8877446 - 8877505
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||| |||||||||||||||||||||| ||| |||||| | ||| ||| ||||||||    
T  8877446 gtaataaggtgataagtagagtatcgtatccacatggattgcccttttgtcgaaacaatt 8877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 714
Target Start/End: Original strand, 20174571 - 20174641
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 714  Q
    ||||||| ||| ||||| ||||||||||||||||||| ||| |||||||||| || |||| ||||| |||||    
T  20174571 gacaagtataccaaatcgtttactaggtaataaagtg-taactagagtatcgcattaacatggattttcgtt 20174641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 777 - 841
Target Start/End: Original strand, 6013739 - 6013800
Alignment:
Q  777 tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtta 841  Q
    ||||||| ||||||||||| ||||| |||||||||||  |||||||||||||| |||| ||||||    
T  6013739 tttttatttgtttgcaacaaagcaa-tttacatgttt--ggttgcagaaaagtgagcaacggtta 6013800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 715
Target Start/End: Original strand, 7397198 - 7397266
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgttt 715  Q
    |||||||| ||| | ||||| | ||||||||||| ||| |||||||||||||| ||| ||||||||||||    
T  7397198 aagtgtaccaaaccgtttaccaagtaataaagtg-taactagagtatcgtatccacatggattgtcgttt 7397266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 742
Target Start/End: Complemental strand, 14196070 - 14195974
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||| ||||| ||||  |  |||||||||| |||||| |||| |||||| ||| | ||| | ||||||||||||||||| |||| ||||||||    
T  14196070 caagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccacaagaattattgtttcgtccaaacaattcgcgttacttattt 14195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 1e-55; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 629 - 869
Target Start/End: Complemental strand, 23844579 - 23844327
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||||||||||||| |||||||| ||||| ||||| | |||||||| |||||||||||||||| |||| | ||||||||||||||||||||||||| |    
T  23844579 tgatggtcggatatgataagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaact 23844480  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagat-------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 815  Q
     |||| ||||||||||||||  |||||||||||||||||             | |||||||||||||||||||||||| ||| ||||||||| || ||||    
T  23844479 cgcgttacttatttttgtaa-gttgacgatataaaagataaaagggttagaaatgttgcaatttttatctgtttgcaatagaccaagtttacctg-tttt 23844382  T
Q  816 ggttgcagaaaagtaagcagcggttaggatttttcgaatccc-cctgttcatatt 869  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  23844381 ggttgcataaaagtaagcagcggttaggatttttcgaatccctcctgtttatatt 23844327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 639 - 858
Target Start/End: Original strand, 25781790 - 25782002
Alignment:
Q  639 atatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactt 738  Q
    ||||||||||||||| ||||| ||||||  |||||||| |||||| |||| ||||||||     || |||||||||||||||||||||||  ||| ||||    
T  25781790 atatgacaagtgtaccaaatcgtttactgagtaataaaatgataaatagaatatcgtat-----ggaattgtcgtttcgtccaaacaattcacgttactt 25781884  T
Q  739 atttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcgg 838  Q
    |||||||||| || || | |||||||| ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| |||  |    
T  25781885 atttttgtaagtt-gatggtataaaagttaggttgcaatttttatctgtttgcaacagagcaagtttacct-attttggttgcagaaaagtaaacagtag 25781982  T
Q  839 ttaggatttttcgaatcccc 858  Q
    |||||||| |||||||||||    
T  25781983 ttaggattcttcgaatcccc 25782002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 645 - 856
Target Start/End: Complemental strand, 27737787 - 27737565
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | ||||||||||||||||||||||||| || | ||| ||||||| ||||||||||||||||| |||| ||||||||||    
T  27737787 caagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttacttattttt 27737688  T
Q  745 gtaattttgacgatataa---aagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    |||| || ||||||| ||   |||||| |          ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  27737687 gtaagtt-gacgataaaatgaaagataagggttagagagttgcaatttttatctgtttgcaacagagcaagtttacctgttttt-gttgcaaaaaagtaa 27737590  T
Q  832 gcagcggttaggatttttcgaatcc 856  Q
    ||||||||||||||| |||||||||    
T  27737589 gcagcggttaggattcttcgaatcc 27737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 24657529 - 24657343
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||| |||||||| |||||||||||| |||||||||||  |||||||| |||||||   || |||||||||||||| ||||||| ||||||   ||    
T  24657529 gtaataaaatgataagtcgagtatcgtatccacagggattgttttttcgtccgaacaattcttgttacttatttttgtaagtttgacggtataaa--gta 24657432  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
     |||| ||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  24657431 agttgaaatttttatctgtttgcaacagagcgaatttacctg-ttttggttgcagaaaagtaagcagcggttagaattcttcgaatcccc 24657343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 649 - 855
Target Start/End: Original strand, 5624645 - 5624862
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtat-caacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgta 747  Q
    ||||| ||||| ||||| | ||||||||||||||||||||||||| ||| ||| || ||||||||||| || |||||||||||||| |||||||||||||    
T  5624645 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatacaatagagattgtcgttttgtgcaaacaatttgcgttacttatttttgta 5624744  T
Q  748 attttgacgatataaa-----------agataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagc 836  Q
    | |||||||||| |||           ||| ||||||||||||||||||||||| || ||||| |||||||  | |||||||||||||||||||||||||    
T  5624745 agtttgacgatagaaaagttaagggttagaaaggttgcaatttttatctgtttgtaatagagc-agtttaccggcttttggttgcagaaaagtaagcagc 5624843  T
Q  837 ggttaggatttttcgaatc 855  Q
    |||||||||| ||||||||    
T  5624844 ggttaggattcttcgaatc 5624862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 680 - 858
Target Start/End: Original strand, 11135943 - 11136122
Alignment:
Q  680 ataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaattt 779  Q
    ||||||||||||||||||| |||| ||||||| |||||||  || ||||   || | |||||||||||| ||||||| |||||||| |||||||||||||    
T  11135943 ataagtagagtatcgtatccacagagattgtcctttcgtctgaataattattgttaattatttttgtaagtttgacggtataaaagttaggttgcaattt 11136042  T
Q  780 ttatctgtttgcaacagagcaagtttacatgtttttggttgc-agaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||||||||||| |  |||| ||||||||||||| | ||||||||| ||||||||||||| |||||||||||    
T  11136043 ttatctgtttgcaacagagcgaacttacctgtttttggttgcaaaaaaagtaagaagcggttaggattcttcgaatcccc 11136122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 627 - 869
Target Start/End: Complemental strand, 17827208 - 17826959
Alignment:
Q  627 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||| ||||||| ||||||||| || || |||| || |||||||||| |||| |||||||||||||| ||| ||||||||||||| |||||||||    
T  17827208 actgatggttggatatggcaagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaa 17827109  T
Q  727 tttgcgtaacttatttttgtaattttgacgatataaaagata-----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgttttt 815  Q
    || |||| ||||||||||    ||||||| ||||||||||||            |||||||||||||| ||||||||||| ||| ||||||| |||||||    
T  17827108 ttcgcgttacttattttt---tttttgacaatataaaagataagggttaaaagagttgcaatttttatatgtttgcaacatagc-agtttacttgttttt 17827013  T
Q  816 ggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||||||||||||||| ||||||| ||| || |||| ||| |||| |||||    
T  17827012 ggttgcagaaaagtaagcaacggttagaattctttgaattcccttgtttatatt 17826959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 630 - 768
Target Start/End: Original strand, 9516771 - 9516908
Alignment:
Q  630 gatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaattt 729  Q
    ||||||| |||||||||||||||| ||||| |||||   |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |     
T  9516771 gatggtcagatatgacaagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactc 9516870  T
Q  730 gcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||| ||||||||||||||  ||||||||||||||||||    
T  9516871 gcgttacttatttttgtaa-gttgacgatataaaagata 9516908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 669 - 854
Target Start/End: Complemental strand, 22413123 - 22412940
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||| ||||||||||||||||||| ||| |||||||  |||||||| |||||||   || |||||||||||||| ||||||| |||||||| ||    
T  22413123 gtaataaagttataagtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtataaaag-ta 22413025  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaat 854  Q
     ||||||| ||||||||||||| |||||||| | ||||| || |||||||| ||| |||||||| ||||||||||||| |||||||    
T  22413024 tgttgcaacttttatctgtttgtaacagagcgaatttacctg-ttttggttacaggaaagtaagtagcggttaggattcttcgaat 22412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 21841762 - 21841574
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||||| |||||||||||| | | ||| ||| |||||||| |||||||| |||| ||   || |||||||||||||| ||||||| |||||||| ||    
T  21841762 gtaataaagagataagtagagttttgaatccacatggattgtcctttcgtccgaacatttcttgttacttatttttgtaagtttgacggtataaaagtta 21841663  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||||||||| |||||||| ||||||||||| || |||||||||||  |||  ||| || |||||||||| |||||||||||    
T  21841662 ggttgcaatttttatctgattgcaacaaagcaagtttacttg-ttttggttgcaagaaatgaagtagtggttaggattcttcgaatcccc 21841574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 673 - 858
Target Start/End: Complemental strand, 23009464 - 23009282
Alignment:
Q  673 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggtt 772  Q
    ||||||||||||||||| |||||||| |||||||||||| |||| |||||| ||||   || |||||||||||||| |||||||||||||||| || |||    
T  23009464 taaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataaaag-taagtt 23009367  T
Q  773 gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||| ||||||| ||||||||||||||||| ||||| || ||||||||| |||  ||||| ||||| |||||| | |||||||||||    
T  23009366 gcagtttttatttgtttgcaacagagcaaatttacctg-ttttggttgaagacgagtaaacagcgattaggactcttcgaatcccc 23009282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 673 - 858
Target Start/End: Original strand, 23778900 - 23779082
Alignment:
Q  673 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggtt 772  Q
    ||||||||||||||||| |||||||| |||||||||||| |||| |||||| ||||   || |||||||||||||| |||||||||||||||| || |||    
T  23778900 taaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa-aattcttgttacttatttttgtaagtttgacgatataaaag-taagtt 23778997  T
Q  773 gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||| ||||||| ||||||||||||||||| ||||| || ||||||||| |||  ||||| ||||| |||||| | |||||||||||    
T  23778998 gcagtttttatttgtttgcaacagagcaaatttacctg-ttttggttgaagacgagtaaacagcgattaggactcttcgaatcccc 23779082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 629 - 742
Target Start/End: Original strand, 9726007 - 9726120
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  9726007 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatt 9726106  T
Q  729 tgcgtaacttattt 742  Q
    ||||| ||||||||    
T  9726107 tgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 629 - 858
Target Start/End: Complemental strand, 27124606 - 27124369
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| |||||  |||||||| ||||| ||||| | ||||||||||||||| || | ||||||||| ||| ||||||||||||||  |||||||||    
T  27124606 tgatggtcgaatatggaaagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaatt 27124507  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 817  Q
      ||| ||||||||||| | ||  |||||||||||| ||| |           || |||||||||| ||||||||||||||||||||||| ||| || ||    
T  27124506 ctcgttacttatttttgaactt--gacgatataaaacataagggttaaaagacttccaatttttatatgtttgcaacagagcaagtttacctgtctt-gg 27124410  T
Q  818 ttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||||||||||||||| |||| || ||||||||    
T  27124409 ttgcagaaaagtaagcagcggttaagattctttgaatcccc 27124369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 669 - 846
Target Start/End: Complemental strand, 22813783 - 22813607
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||| |||||||||||  |||| ||||| | |||||||||| |||| ||| |||||||   || ||||||||||||   ||||||  |||||||| ||    
T  22813783 gtaatatagtgataagtaatgtattgtatctatagggattgtcctttcatccgaacaattcttgttacttatttttgtcggtttgacagtataaaagtta 22813684  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    || |||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||| |||||||| ||||    
T  22813683 ggatgcaatttttatttgtttgcaacaaagcaagtttacctg-ttttggttgcagaaaagtaagtagcggttatgatt 22813607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 23232057 - 23231859
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||||||||||||||| ||||| |||| | | | ||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||| ||    
T  23232057 gtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttatttttgtaagtttgacgatataaaagtta 23231958  T
Q  769 --gg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
      ||         |||||| |||||||||||||||||||||||| ||||| || ||||||||  ||||||||||||| || |||||||| ||||||||||    
T  23231957 acggttagaagtcttgcaa-ttttatctgtttgcaacagagcaaatttacttg-ttttggttatagaaaagtaagcaacgtttaggattcttcgaatccc 23231860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 771 - 858
Target Start/End: Complemental strand, 20005879 - 20005792
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  20005879 ttgcaatttttatttgtttgcaacagagcgagtttacctgtttttggttgcagaaaggtatgcagcggttaagattcttcgaatcccc 20005792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 628 - 723
Target Start/End: Complemental strand, 20005994 - 20005899
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    |||||||||||||| ||||||||||| ||||| ||||| | |||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||    
T  20005994 ctgatggtcggatacgacaagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaaa 20005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 777 - 869
Target Start/End: Original strand, 14637012 - 14637104
Alignment:
Q  777 tttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    |||||||||  || ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||| || |||||    
T  14637012 tttttatcttattacaacagagcaagtttacctgtttttggttgcagaaaagtaagcagcgaataggattcttcgaatccccctatttatatt 14637104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 649 - 745
Target Start/End: Complemental strand, 23645861 - 23645765
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    ||||| ||||| ||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||  ||| | |||||||||    
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttg 23645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 771 - 858
Target Start/End: Complemental strand, 20145083 - 20144996
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||| |||||||||||| |||||||||| |||||| |||||||||||    
T  20145083 ttgcaatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggtaaggattcttcgaatcccc 20144996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 771 - 858
Target Start/End: Original strand, 22187756 - 22187843
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||| |||||||||||| |||||||||| |||||| |||||||||||    
T  22187756 ttgcaatttttatatgtttgcaacagagaaagtttacgtatttttagttgcagaaaagcaagcagcggtaaggattcttcgaatcccc 22187843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 669 - 826
Target Start/End: Complemental strand, 22410401 - 22410234
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgat---ataaaag 765  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||  ||| ||||||||||   |  ||||||||   |||||||    
T  22410401 gtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttattttt---aagttgacgatataataaaag 22410305  T
Q  766 atagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaa 826  Q
    ||| |          ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||    
T  22410304 ataagggttagaatcttgcaatttttatctgtttgcaacagagcaagttttcctatttttggttgcagaaa 22410234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 23143723 - 23143806
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||||| ||||| |  |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  23143723 caagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaatt 23143806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 778 - 840
Target Start/End: Original strand, 17382214 - 17382275
Alignment:
Q  778 ttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt 840  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17382214 ttttatctgtttgcaacagagcaagtttacatg-ttttggttgcagaaaagtaagcagcggtt 17382275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 768 - 869
Target Start/End: Original strand, 24475191 - 24475292
Alignment:
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc-cccctgttcat 866  Q
    |||||||||| ||||||||||||||||| | ||||||||| |||||| ||||||||||||||||| || |||||||||| |||||||| |||||||| ||    
T  24475191 aggttgcaatctttatctgtttgcaacaaaacaagtttacctgtttt-ggttgcagaaaagtaagtagtggttaggattcttcgaatctcccctgtttat 24475289  T
Q  867 att 869  Q
    |||    
T  24475290 att 24475292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 770 - 859
Target Start/End: Complemental strand, 14079420 - 14079331
Alignment:
Q  770 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||||||||||||||||||||| || |||||| | | ||||||||| |||||||||||||||||||||| ||| ||||||| ||||    
T  14079420 gttgcaatttttatctgtttgcaacaaaggaagttttcctatttttggttacagaaaagtaagcagcggttagaattcttcgaattcccc 14079331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 771 - 878
Target Start/End: Complemental strand, 12183290 - 12183185
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatattc 870  Q
    ||||||| ||||||||||||||||| |||||||| || |||||| |||| |||||||||||||| ||||||||||| ||||||||||||| || |||||     
T  12183290 ttgcaatgtttatctgtttgcaacatagcaagtt-acctgtttt-ggttacagaaaagtaagcaacggttaggattcttcgaatccccctatttatattg 12183193  T
Q  871 ttcgacat 878  Q
    || |||||    
T  12183192 ttggacat 12183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 655 - 742
Target Start/End: Complemental strand, 17299919 - 17299832
Alignment:
Q  655 aaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||| ||||| | |||||||||||||||||||||||||||||  |  ||||||||||||| ||||||||||||||||| ||||||||    
T  17299919 aaatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 646 - 733
Target Start/End: Original strand, 17729154 - 17729241
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgt 733  Q
    |||||||| ||||| ||||| | |||||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||| ||||    
T  17729154 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgt 17729241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 645 - 728
Target Start/End: Complemental strand, 21679949 - 21679866
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||| || ||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||    
T  21679949 caagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21679866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 645 - 743
Target Start/End: Complemental strand, 12183429 - 12183331
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||| | |||||||||||||||||| ||||||||||| ||| |||||||| |||||||| |||||||  ||| |||||||||    
T  12183429 caagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaattcacgttacttatttt 12183331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 629 - 723
Target Start/End: Original strand, 21907417 - 21907511
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    ||||||||||||  | ||||| ||| ||||| ||||| | |||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  21907417 tgatggtcggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaa 21907511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 670 - 743
Target Start/End: Complemental strand, 28933733 - 28933660
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||  ||||||||    
T  28933733 taataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgcttatttt 28933660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 629 - 741
Target Start/End: Complemental strand, 25927417 - 25927305
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||| | ||||| | |||||||||||||||||||| ||||||||| ||| ||||| | |||||||||||||||||    
T  25927417 tgatggtcggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaatt 25927318  T
Q  729 tgcgtaacttatt 741  Q
      ||| |||||||    
T  25927317 cacgttacttatt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 645 - 728
Target Start/End: Complemental strand, 21672533 - 21672450
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||| || ||||| ||||| | |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||    
T  21672533 caagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaatt 21672450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 743
Target Start/End: Original strand, 15466371 - 15466468
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||| | ||||||||||| || ||||||||||||||||| |||||||||| ||||||| |||||||| |||| | |||||||    
T  15466371 caagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgttagttatttt 15466468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 646 - 727
Target Start/End: Complemental strand, 18075485 - 18075404
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||||||||  ||||| | |||||||||||||||| ||||||||||||| ||  |||||||||||| |||||||||||    
T  18075485 aagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaat 18075404  T

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Target: chr6; HSP #39
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 646 - 743
Target Start/End: Complemental strand, 21688892 - 21688795
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||  |||| ||||||| ||||| |||||||||||||||||| ||||| | ||||||||||||| | |||||| |||| |||| |||||||||    
T  21688892 aagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttacttatttt 21688795  T

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Target: chr6; HSP #40
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 766 - 855
Target Start/End: Complemental strand, 22566127 - 22566039
Alignment:
Q  766 ataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    |||| |||||||||||||||||||||||||   |||||| || | |||||| ||| |||||||||||||||||||||||||||| |||||    
T  22566127 atagattgcaatttttatctgtttgcaacactacaagtt-acctatttttgattgtagaaaagtaagcagcggttaggattttttgaatc 22566039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 771 - 856
Target Start/End: Complemental strand, 23645727 - 23645644
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcc 856  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||| || || ||||||    
T  23645727 ttgcaatttttatttgtttgcaacagagcaag-ttacatg-ttttggttgcataaaagtaagcagtggttaggcttctttgaatcc 23645644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 771 - 859
Target Start/End: Complemental strand, 28933620 - 28933534
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||| || |||||||||||| | || |||||||||    
T  28933620 ttgcaatttttatctgtttgcaacagagcaag-ttacttgttcttggttgca-aaaaggaaacagcggttaggactctttgaatccccc 28933534  T

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Target: chr6; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 780 - 855
Target Start/End: Original strand, 1635110 - 1635183
Alignment:
Q  780 ttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    |||||||||||||||| |||||||| ||||||||| ||||| |||||||||| |||||||||||||| ||||||||    
T  1635110 ttatctgtttgcaacaaagcaagtt-acatgtttt-ggttgtagaaaagtaaacagcggttaggattcttcgaatc 1635183  T

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Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 775 - 860
Target Start/End: Original strand, 9838499 - 9838582
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||||||| |||||||||| ||  ||||| |||||||||||||||||||  |||||||||| ||| |||||||||    
T  9838499 aatttttatctgtttgcaaaagagcaagtt-acccgtttt-ggttgcagaaaagtaagcaatggttaggattcttcaaatccccct 9838582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 630 - 715
Target Start/End: Original strand, 17382131 - 17382216
Alignment:
Q  630 gatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgttt 715  Q
    |||||| ||||||| ||| ||||| ||||| ||||| |   ||||||||||| |||||||||||||||| ||||||||||||||||    
T  17382131 gatggtaggatatggcaaatgtactaaatcgtttaccaatgaataaagtgatgagtagagtatcgtatctacagggattgtcgttt 17382216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 669 - 726
Target Start/End: Original strand, 19244610 - 19244667
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||    
T  19244610 gtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaacaa 19244667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 771 - 860
Target Start/End: Original strand, 8241414 - 8241499
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||||||||||||| |||||| |||| ||  |||||||| ||||||||||||||| |||| || |||| ||||||||||    
T  8241414 ttgcaatttttatctgtttgcaacatagcaag-ttacctg--tttggttgtagaaaagtaagcagcagtta-gactttttgaatccccct 8241499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 743
Target Start/End: Original strand, 11176935 - 11177049
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | |||||||||  |||| |||||   ||| |||||||||||||||||||||||||| ||| || |||||||||| || ||| ||||    
T  11176935 tgatggtcggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataatt 11177034  T
Q  729 tgcgtaacttatttt 743  Q
     | || |||||||||    
T  11177035 cgtgttacttatttt 11177049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 743
Target Start/End: Original strand, 22567825 - 22567939
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||  ||||| | ||||||| |||| ||||| ||||| ||||| ||| ||||||| ||||||||||||||| |    
T  22567825 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaact 22567924  T
Q  729 tgcgtaacttatttt 743  Q
      ||| |||||||||    
T  22567925 cacgttacttatttt 22567939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 670 - 743
Target Start/End: Original strand, 4339761 - 4339834
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||||||||||||||||| ||||| |||  ||||||||||| |||||| ||||| || | |||||||||    
T  4339761 taataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcattacttatttt 4339834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 771 - 842
Target Start/End: Original strand, 15466509 - 15466577
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttag 842  Q
    |||||| |||||||||||||||||||||||||||   |  | ||||||||||||||||||| ||||||||||    
T  15466509 ttgcaaattttatctgtttgcaacagagcaagtt---acctatttggttgcagaaaagtaaacagcggttag 15466577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 669 - 742
Target Start/End: Complemental strand, 22566236 - 22566163
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||||||||||||||||| |||| ||| | ||||||| |||||| || ||||| |||| ||||||||    
T  22566236 gtaataaagtgataagtagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttacttattt 22566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 669 - 741
Target Start/End: Complemental strand, 7543034 - 7542962
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatt 741  Q
    |||||||||||||||||| |||||||||||||   ||| ||| ||||| ||||||||||| |||| |||||||    
T  7543034 gtaataaagtgataagtaaagtatcgtatcaatgtggactgtagtttcatccaaacaattcgcgttacttatt 7542962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 629 - 716
Target Start/End: Complemental strand, 28586145 - 28586057
Alignment:
Q  629 tgatggtcggatat-gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    |||||||||||| | ||||||| ||| ||||| |||||   |||||||| |||||||||||||||| |||| ||| |||||||||||||    
T  28586145 tgatggtcggatttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttc 28586057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 8241278 - 8241359
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||||| ||||| | |||| ||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||    
T  8241278 caagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaatt 8241359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 649 - 748
Target Start/End: Complemental strand, 17883878 - 17883780
Alignment:
Q  649 tgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa 748  Q
    ||||| ||||| ||||| | ||||||| ||| | ||||||| |||| ||| |||||||||||| |||||||||||||||| | || ||||| ||||||||    
T  17883878 tgtaccaaatcgtttaccaagtaataacgtg-tgagtagaggatcgcatcgacagggattgtcctttcgtccaaacaattcgtgttacttacttttgtaa 17883780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 775 - 858
Target Start/End: Original strand, 21907577 - 21907659
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||||||||||||||||||| |||  | |||||||||||| ||||| || ||||||||| || | || ||||||||    
T  21907577 aatttttatctgtttgcaacagagcaag-ttagctatttttggttgcaaaaaaggaaacagcggttacgactctttgaatcccc 21907659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 669 - 743
Target Start/End: Original strand, 9838381 - 9838455
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||||||||||||||||||| ||||| ||| |||||||| ||| ||  |||||| | |||| |||||||||    
T  9838381 gtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttatttt 9838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 803 - 869
Target Start/End: Complemental strand, 17883771 - 17883705
Alignment:
Q  803 tttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||| |||||||||||| |||||||||||||||| ||| |||| ||| |||||||| ||| |||||    
T  17883771 tttacctgtttttggttggagaaaagtaagcagcgtttatgattcttcaaatcccccagtttatatt 17883705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 775 - 832
Target Start/End: Complemental strand, 24252186 - 24252131
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 832  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||||||| |||||    
T  24252186 aatttttatctgtttgcaacagagcaagttt-cgtg-ttttggttgcagaaatgtaag 24252131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 743
Target Start/End: Complemental strand, 9899074 - 9898958
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtg-ataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||||||||| |  ||||||||||| ||||  ||||| | ||||||||||  | ||||||||||| ||||| || |||||||| ||||||| ||||| |    
T  9899074 ctgatggtcgggttagacaagtgtaccaaattgtttaccaagtaataaagtctaaaagtagagtattgtatccacggggattgttgtttcgttcaaacca 9898975  T
Q  727 tttgcgtaacttatttt 743  Q
    ||  ||| |||||||||    
T  9898974 ttcacgttacttatttt 9898958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 700 - 764
Target Start/End: Original strand, 14636923 - 14636987
Alignment:
Q  700 acagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaa 764  Q
    ||||| ||||||||| |||| |||||||| | || |||||||||| ||| |||||||||||||||    
T  14636923 acaggaattgtcgttccgtctaaacaattcgtgttacttatttttataagtttgacgatataaaa 14636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 685 - 745
Target Start/End: Complemental strand, 24252287 - 24252227
Alignment:
Q  685 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||   || |||||||||||    
T  24252287 tagagtatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttatttttg 24252227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 696
Target Start/End: Complemental strand, 14079542 - 14079491
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgta 696  Q
    ||||||||| ||||| ||||| | || |||||||||||||||||||||||||    
T  14079542 caagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 771 - 846
Target Start/End: Complemental strand, 25927265 - 25927192
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    ||||||||||||||||||||||| |||||||| |||| || |||||||| || ||| || || |||||||||||||    
T  25927265 ttgcaatttttatctgtttgcaatagagcaag-ttacctg-ttttggtttcataaatgttagtagcggttaggatt 25927192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 846
Target Start/End: Original strand, 9516921 - 9516998
Alignment:
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    |||||| || ||||||||||| |||||| ||||||||||| |  ||||| |||||||||| ||||||||  ||||||||    
T  9516921 aggttgtaagttttatctgttagcaacatagcaagtttacct-attttgattgcagaaaattaagcagccattaggatt 9516998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 812 - 846
Target Start/End: Complemental strand, 18075331 - 18075297
Alignment:
Q  812 ttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    |||||||||||||||||||||||||||||| ||||    
T  18075331 ttttggttgcagaaaagtaagcagcggttaagatt 18075297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 645 - 695
Target Start/End: Complemental strand, 21932150 - 21932100
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgt 695  Q
    ||||||||| ||||  ||||| | |||||||||||||||||||||||||||    
T  21932150 caagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 669 - 739
Target Start/End: Original strand, 24251541 - 24251611
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactta 739  Q
    |||||||||| ||||| |||| |||| ||| |||||| ||||||| | |||||||||||| |||| |||||    
T  24251541 gtaataaagtcataagcagaggatcgcatccacagggtttgtcgtcttgtccaaacaattcgcgttactta 24251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 771 - 844
Target Start/End: Original strand, 11177089 - 11177161
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    |||||||||||||  |||||||||| |||||| |||| ||||||| ||| || ||||| || ||||||||||||    
T  11177089 ttgcaatttttataagtttgcaacatagcaag-ttacctgttttttgttacataaaaggaaacagcggttagga 11177161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 771 - 844
Target Start/End: Complemental strand, 21672394 - 21672323
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||||||||||||||| |||||||| ||||||| |||| || |||| |||||| |||||||||  ||||||||||    
T  21672394 ttgcaatttttatctatttgcaactgagcaag-ttacctg-ttttcgttgcataaaagtaagtggcggttagga 21672323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 771 - 844
Target Start/End: Complemental strand, 21679810 - 21679739
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||||||||||||||| |||||||| ||||||| |||| || |||| |||||| |||||||||  ||||||||||    
T  21679810 ttgcaatttttatctatttgcaactgagcaag-ttacctg-ttttcgttgcataaaagtaagtggcggttagga 21679739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 9e-54; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 627 - 869
Target Start/End: Complemental strand, 15375999 - 15375758
Alignment:
Q  627 actgatggtcggat-atgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 725  Q
    |||||||||||||| ||| ||||||||| ||||| ||||| |  ||||||| |||||||||||||||| |||| |||||||||||||||||||||||| |    
T  15375999 actgatggtcggattatggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaa 15375900  T
Q  726 atttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaa 825  Q
    |||||| | ||||||||||| ||  |||||| |||||||  ||| ||||||||||||| ||||||||||||||||||||  | | |||||||||||| ||    
T  15375899 atttgcattacttatttttgcaa-gttgacggtataaaa-ttagattgcaatttttatttgtttgcaacagagcaagttcgcctatttttggttgcataa 15375802  T
Q  826 aagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||| | ||||||||||| ||||||||||||| | ||||||    
T  15375801 aagtaagtaacggttaggattcttcgaatccccctatacatatt 15375758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 629 - 854
Target Start/End: Original strand, 17431868 - 17432103
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||||||||||||| ||||| ||||| | |||||||||||  ||||||||||||||||| |||| |||||||||||| ||||||||| |    
T  17431868 tgatggtcggatatgacaagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaact 17431967  T
Q  729 tgcgtaacttatttttgtaa-ttttgacgatataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 817  Q
      ||  |||||||||| ||| ||||| |||||||||| |||           |||| ||||||| ||||||||||||||||||||||||| || ||||||    
T  17431968 cacgctacttatttttataagttttggcgatataaaatataagggttaaagagttgtaatttttttctgtttgcaacagagcaagtttacttg-ttttgg 17432066  T
Q  818 ttgcagaaaagtaagcagcggttaggatttttcgaat 854  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17432067 ttgcagaaaagtaagcagcggttaggattcttcgaat 17432103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 669 - 855
Target Start/End: Complemental strand, 20564155 - 20563969
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | |||||||||||||||||| ||| |||||||  ||||||||||||  ||   || |||||||||||||| ||||||| ||||||||      
T  20564155 gtaataaagttagtaagtagagtatcgtatccacatggattgttctttcgtccaaacgcttctagttacttatttttgtaagtttgacggtataaaagtg 20564056  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    || ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  20564055 ag-ttgcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagaaaagtaagaagcagttaggattcttcgaatc 20563969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 632 - 869
Target Start/End: Complemental strand, 24245655 - 24245407
Alignment:
Q  632 tggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgc 731  Q
    |||||||||||| |||||||   |||||  |||| | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||    
T  24245655 tggtcggatatgtcaagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgc 24245556  T
Q  732 gtaacttatttttgtaattttgacgatataaaagat-------------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggt 818  Q
    || ||||||||||||||  ||||  |||||||||||             ||||| | |||||||| ||||| ||||| ||||||||||| || |||| ||    
T  24245555 gttacttatttttgtaa-gttgagaatataaaagataaaagggttagaaaggtttcgatttttatttgtttccaacaaagcaagtttacctg-ttttagt 24245458  T
Q  819 tgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    |||||||||||||||| ||||||||||| |||||||||||||||| |||||    
T  24245457 tgcagaaaagtaagcaacggttaggattcttcgaatccccctgtttatatt 24245407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 23388912 - 23388724
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||   || |||||||||||||| ||||||| | |||||| ||    
T  23388912 gtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtgtaaaagtta 23388813  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||| |||||||||||||||||| | ||||| ||  |||| ||| |||||   ||||||| ||||||||| |||||||||||    
T  23388812 ggttgcaattttcatctgtttgcaacagagcgaatttacctg-ctttgattggagaaagtaaagcagcagttaggattcttcgaatcccc 23388724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 28664799 - 28664986
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||||||||||||||  | ||||| |||| |||||| | |||||||  ||| ||||||||||| || ||||||| |||||||  ||    
T  28664799 gtaataaagtgataagtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttatttttgcaagtttgacggtataaaa-tta 28664897  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
     || ||||||||||||||||||||||||||| | ||||| || |||||||||||||||| |||||| |||||| |||| |||||||||||    
T  28664898 agtcgcaatttttatctgtttgcaacagagcgaatttacctg-ttttggttgcagaaaaataagcaacggttaagattcttcgaatcccc 28664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 637 - 806
Target Start/End: Complemental strand, 19004332 - 19004153
Alignment:
Q  637 ggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaac 736  Q
    ||||||| ||||||||| ||||| ||||| | ||||||||||||||||| |||||||||||| ||| |||||||| ||| ||||||||||||  ||| ||    
T  19004332 ggatatggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttac 19004233  T
Q  737 ttatttttgtaattttgacgatataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagttta 806  Q
    |||||||||||| |||||||||||||||||||           ||||||||||||||||||||||||||| |||||||||    
T  19004232 ttatttttgtaagtttgacgatataaaagataagggttaaatagttgcaatttttatctgtttgcaacagggcaagttta 19004153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 669 - 857
Target Start/End: Original strand, 20858710 - 20858896
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||| ||||||||||||||||||||| || | ||||||| ||| |||| |||||||   || |||||||||||||| ||||||| |||||||| ||    
T  20858710 gtaataaaatgataagtagagtatcgtatccacggagattgtccttttgtccgaacaattcttgttacttatttttgtaagtttgacggtataaaag-ta 20858808  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
     ||| ||||||||||| |||||||||| ||| | ||||| |  ||||||||||| |||||||||||||||||||||||  |||||||||    
T  20858809 agttacaatttttatcggtttgcaacaaagcgaatttacct-attttggttgcataaaagtaagcagcggttaggattcgtcgaatccc 20858896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 681 - 858
Target Start/End: Complemental strand, 16523852 - 16523677
Alignment:
Q  681 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 780  Q
    |||||||||||| ||||| |||||| ||||| |||||||| |||||||   || ||||| |||||||| ||||||  | |||||| ||| ||||||||||    
T  16523852 taagtagagtattgtatccacagggtttgtcctttcgtccgaacaattattgttacttagttttgtaagtttgacagtttaaaag-tag-ttgcaatttt 16523755  T
Q  781 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||| | ||||| ||||||| |||  ||||||||||||||||||||||||| || ||||||||    
T  16523754 tatctgtttgcaacagagcgaatttacctgttttttgttatagaaaagtaagcagcggttaggattctttgaatcccc 16523677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 656 - 857
Target Start/End: Complemental strand, 20315517 - 20315305
Alignment:
Q  656 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 755  Q
    |||| ||||| | ||||||| |||||||||||||||||||||| ||| ||||| || |||||||||||||||| ||||||||||||||| | |  |||||    
T  20315517 aatcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttatttttattaagttgac 20315418  T
Q  756 gatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 843  Q
    |||||||||  || |            ||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||| |||| |||||    
T  20315417 gatataaaatttaagggataaagaaacttgcaatttttatctgtttgcaacaaagcaagtttacatg-ttttggttgcaaaatagtaagaagcgattagg 20315319  T
Q  844 atttttcgaatccc 857  Q
     || ||||||||||    
T  20315318 gttcttcgaatccc 20315305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 17315174 - 17314987
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||| ||||||||||| ||| |||||||| |||| ||| |||||||   || |||||||||||||| ||||  | ||||||||| |    
T  17315174 gtaataaagtgataagtaaagtatcgtatccacatggattgtcctttcttccgaacaattctagttacttatttttgtaagtttgttggtataaaaga-a 17315076  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
     ||| |||||||||||| ||||||| ||||| |  |||| || ||||||||||| |||||||||||||||||| |||| || ||||||||    
T  17315075 agttacaatttttatctttttgcaatagagcgaagttacctg-ttttggttgcaaaaaagtaagcagcggttaagattctttgaatcccc 17314987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 712 - 869
Target Start/End: Complemental strand, 20744699 - 20744532
Alignment:
Q  712 gtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagatagg----------ttgcaatttttatctgtttgcaacagagcaa 801  Q
    |||||||||||||| ||  ||| |||||||||||||| |||||||||||||||| || |          ||||||||||||||||||||||||| |||||    
T  20744699 gtttcgtccaaacatttcacgttacttatttttgtaagtttgacgatataaaagttaagggttagagagttgcaatttttatctgtttgcaacatagcaa 20744600  T
Q  802 gtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc-cctgttcatatt 869  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||    
T  20744599 gtttacctgtttt-ggttgtagaaaagtaagcagcggttaggattcttcgaatcccacctgtttatatt 20744532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 656 - 856
Target Start/End: Original strand, 24140454 - 24140658
Alignment:
Q  656 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 755  Q
    |||| ||||| | |||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||||| |||| || ||||||| | |  || ||    
T  24140454 aatcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatatttttattaagttaac 24140553  T
Q  756 gatata------aaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggattttt 849  Q
    ||||||      ||||| |  || |||||||||||||| ||| ||||||||||||||| |  ||||||||||||||||||||||| ||||||||||| ||    
T  24140554 gatataagggttaaagaga-cttccaatttttatctgtgtgcgacagagcaagtttacct-attttggttgcagaaaagtaagcaacggttaggattctt 24140651  T
Q  850 cgaatcc 856  Q
    | |||||    
T  24140652 caaatcc 24140658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 681 - 858
Target Start/End: Complemental strand, 20549766 - 20549592
Alignment:
Q  681 taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttt 780  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||||   || |||||||||||||  ||  | | |||||||| ||| ||||||||||    
T  20549766 taagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttgtaggtta-atggtataaaag-tag-ttgcaatttt 20549670  T
Q  781 tatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    || |||||| ||||||||  | ||||| |||||||||||||||  ||||||||||||||||||||| |||||| ||||    
T  20549669 tacctgtttacaacagagtgattttacctgtttttggttgcaggcaagtaagcagcggttaggattcttcgaaacccc 20549592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 629 - 860
Target Start/End: Original strand, 34128622 - 34128862
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||| ||| ||||||||| || || || || | |||||||||||||||||||| ||||||||| ||||| |||||| ||||||||||| ||||    
T  34128622 tgatggtcggaaatggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaatt 34128720  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttg 816  Q
      |||  ||||||||| ||| || || | |||||||| || |            ||| |||||| |  ||||||||| ||||||||||||| |||||| |    
T  34128721 ctcgtttcttatttttataagtt-gaaggtataaaagttaagggttaaaaagacttgaaattttgacttgtttgcaatagagcaagtttacctgtttt-g 34128818  T
Q  817 gttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    |||||||||||||||||| ||||||||||| |||||||||||||    
T  34128819 gttgcagaaaagtaagcaacggttaggattcttcgaatccccct 34128862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 643 - 728
Target Start/End: Original strand, 17185462 - 17185547
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  17185462 gacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaatt 17185547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 728
Target Start/End: Complemental strand, 18208362 - 18208264
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  18208362 tgatggtcggattaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaatt 18208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 645 - 728
Target Start/End: Complemental strand, 25550602 - 25550519
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||  ||||| ||||| | ||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  25550602 caagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaatt 25550519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 629 - 743
Target Start/End: Original strand, 18937733 - 18937846
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||| |||| || |||||||||||||||||| ||||||||||  | ||||||||| |||||||||||||||||    
T  18937733 tgatggtcggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaacaatt 18937831  T
Q  729 tgcgtaacttatttt 743  Q
      ||| |||||||||    
T  18937832 cacgttacttatttt 18937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 646 - 743
Target Start/End: Complemental strand, 17171650 - 17171553
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||| ||||||||||  | ||||||||||||||||||||| |||||||| ||| |||||||||||||||| || ||||| |||| | |||||||    
T  17171650 aagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgttaattatttt 17171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 641 - 855
Target Start/End: Original strand, 39434460 - 39434676
Alignment:
Q  641 atgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttat 740  Q
    ||||||||||||| || || ||||| | |||||||| |||||||||||  |||||||| ||| |||||||| ||| |||||||||||| |||| ||||||    
T  39434460 atgacaagtgtaccaa-tcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttat 39434558  T
Q  741 ttttgtaattttgacgatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaag 828  Q
    |||| | |  ||||||||||||||| || |            |||||||||||||||||||||||        |||||| |||||| | |||||||||||    
T  39434559 ttttattaacttgacgatataaaagttaagggttaaaaagaattgcaatttttatctgtttgcaa--------gtttacctgtttt-gtttgcagaaaag 39434649  T
Q  829 taagcagcggttaggatttttcgaatc 855  Q
    |||||| ||||||||||| ||||||||    
T  39434650 taagcaacggttaggattcttcgaatc 39434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 629 - 728
Target Start/End: Original strand, 22755506 - 22755605
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  |||||||||||  |||| ||||| | ||||| ||| |||||||||||||||||||| | | ||||||||||||| |||||||||||    
T  22755506 tgatggtcggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaatt 22755605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 743
Target Start/End: Complemental strand, 19283969 - 19283855
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  |  ||||| || ||||| ||||| |  ||||||||||||||||||||||| ||||| ||| | |||  ||||||||||||||||||    
T  19283969 tgatggtcggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaatt 19283870  T
Q  729 tgcgtaacttatttt 743  Q
    ||| |||||||||||    
T  19283869 tgcttaacttatttt 19283855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 627 - 728
Target Start/End: Original strand, 15469919 - 15470020
Alignment:
Q  627 actgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||| ||||||||  | ||||||||| ||||| ||||| | |||||||||||||| || |||||||||||| ||| | |||||||||||||| ||||||    
T  15469919 actgacggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttcgtctaaacaa 15470018  T
Q  727 tt 728  Q
    ||    
T  15470019 tt 15470020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 774 - 831
Target Start/End: Original strand, 18937889 - 18937945
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  18937889 caatttttatctgtttgcaacagagcaag-ttacatgtttttggttgcagaaatgtaa 18937945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 644 - 745
Target Start/End: Original strand, 36175134 - 36175234
Alignment:
Q  644 acaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||||| ||||| ||||| | ||||||||||| |  ||||||||||||||| | | |||||||||||||||||||||||  ||||| |||||||||    
T  36175134 acaagtgtaccaaatcgtttaccaagtaataaagtgttt-gtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttacttatttt 36175232  T
Q  744 tg 745  Q
    ||    
T  36175233 tg 36175234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 779 - 857
Target Start/End: Original strand, 26835796 - 26835872
Alignment:
Q  779 tttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
    ||||||||||||||||||||| | ||||| ||||||  |||||||||||||| ||||| ||||||||| ||||||||||    
T  26835796 tttatctgtttgcaacagagcgaatttacctgtttt--gttgcagaaaagtatgcagcagttaggattcttcgaatccc 26835872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 670 - 744
Target Start/End: Original strand, 15690803 - 15690877
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||||||||||||||||||||||| ||  | ||||||||||||||||| |||||  ||| ||||||||||    
T  15690803 taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttacttattttt 15690877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 645 - 743
Target Start/End: Complemental strand, 24267052 - 24266955
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||| || ||| |||||||||||| | || |||||||||    
T  24267052 caagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttatttt 24266955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 645 - 743
Target Start/End: Complemental strand, 24343683 - 24343586
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||| ||| ||||| || ||| |||||||||||| | || |||||||||    
T  24343683 caagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttatttt 24343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 646 - 743
Target Start/End: Original strand, 34487640 - 34487736
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||| ||||  ||||| | ||||||||||| |||||||| |||| |||| ||| |||||||||||||||| |||||||| |||| |||||||||    
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttatttt 34487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 675 - 743
Target Start/End: Complemental strand, 25402405 - 25402337
Alignment:
Q  675 aagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||  ||| |||| |||||||||    
T  25402405 aagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttacttatttt 25402337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 775 - 859
Target Start/End: Complemental strand, 26121280 - 26121197
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    ||||||||||||||||||| ||||||||||  | | ||||||||| |||||||||||| || |||||||||| || |||||||||    
T  26121280 aatttttatctgtttgcaagagagcaagttatc-tatttttggttacagaaaagtaagtagtggttaggattctttgaatccccc 26121197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 765
Target Start/End: Original strand, 19051551 - 19051669
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    |||||||| ||||| ||||| | ||||||||||||||||| |||| |||||||  |||||||||| ||| | || ||||||||   || |||||||||||    
T  19051551 aagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatc-ccagggattgttgttccatctaaacaattcttgttacttatttttg 19051649  T
Q  746 taattttgacgatataaaag 765  Q
    ||| ||||| || |||||||    
T  19051650 taagtttgatgacataaaag 19051669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 742
Target Start/End: Complemental strand, 24852287 - 24852173
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||| ||||  | ||||| ||| |||||  |||| | |||||||| ||||||||| ||||||||||| ||| ||||||| |||||||| |||||||    
T  24852287 ctgatggttggattaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaat 24852188  T
Q  728 ttgcgtaacttattt 742  Q
    |  ||| ||||||||    
T  24852187 tcacgttacttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 771 - 860
Target Start/End: Original strand, 15690916 - 15691002
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||| |||| | |||||||||| || || |||||| ||||||||||||||||||||  ||||||||| |||||||||||||    
T  15690916 ttgcaatttttatttgttcgtaacagagcaaatt-acctgtttt-ggttgcagaaaagtaagcag-tgttaggattcttcgaatccccct 15691002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 768 - 860
Target Start/End: Complemental strand, 18208212 - 18208123
Alignment:
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    |||||||||||||||||||||||||  |||||||| |||| ||  |||||||||||||||||||| ||| ||||  | | |||||||||||||    
T  18208212 aggttgcaatttttatctgtttgcagtagagcaag-ttacctg--tttggttgcagaaaagtaagtagcagttacaactcttcgaatccccct 18208123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 771 - 844
Target Start/End: Complemental strand, 24265435 - 24265364
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||||||||||||||||||||||| | |||||||| || | | ||| ||||||||||||||||||||||||||||    
T  24265435 ttgcaatttttatctgtttgcaataaagcaagtt-acct-tatttagttgcagaaaagtaagcagcggttagga 24265364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 771 - 844
Target Start/End: Complemental strand, 24342066 - 24341995
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||||||||||||||||||||||| | |||||||| || | | ||| ||||||||||||||||||||||||||||    
T  24342066 ttgcaatttttatctgtttgcaataaagcaagtt-acct-tatttagttgcagaaaagtaagcagcggttagga 24341995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 771 - 855
Target Start/End: Original strand, 36175272 - 36175354
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    ||||||||||||||||||| ||||| |||||| |||| || ||||||||| ||||||||||| |||||||| |||| || |||||    
T  36175272 ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 36175354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 629 - 688
Target Start/End: Complemental strand, 20744925 - 20744866
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtaga 688  Q
    ||||||||||||||| ||||||||| ||||| ||||| | |||||||||||||| |||||    
T  20744925 tgatggtcggatatggcaagtgtaccaaatcatttaccaagtaataaagtgatatgtaga 20744866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 771 - 846
Target Start/End: Original strand, 24260655 - 24260728
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    |||||||||||||||||||||||||||||||| |||| |  ||||||||||||||| || || |||||||| ||||    
T  24260655 ttgcaatttttatctgtttgcaacagagcaag-ttacct-attttggttgcagaaatgttaggagcggttatgatt 24260728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 646 - 745
Target Start/End: Original strand, 26120867 - 26120965
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    |||||||| ||||  ||||| | ||||||||||  ||||||||||||| |||  | | ||||||||||||||||||||||||| || | |||||||||||    
T  26120867 aagtgtaccaaattgtttaccatgtaataaagtt-taagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattacttatttttg 26120965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 771 - 829
Target Start/End: Original strand, 34487777 - 34487832
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagt 829  Q
    ||||||||||||||||||| ||||||||||| ||||||||  |||||||||||||||||    
T  34487777 ttgcaatttttatctgttttcaacagagcaa-tttacatg--tttggttgcagaaaagt 34487832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 727
Target Start/End: Complemental strand, 24167681 - 24167600
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||  ||||| ||||| | ||||||||||  ||||||||||||| |||  ||| ||||||||||||| ||||||||||    
T  24167681 aagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtttcttccaaacaat 24167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 19086294 - 19086230
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtat 692  Q
    |||||| ||||||  || |||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  19086294 ctgatgatcggattagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtat 19086230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 744
Target Start/End: Complemental strand, 26121437 - 26121323
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||| ||||  | |||||||| || |||||||||||| ||||| ||||||||| | ||||| |||||  ||||    
T  26121437 tgatggtcggattaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatccacagggatttttgtttcatccaataaatt 26121339  T
Q  729 tgcgtaacttattttt 744  Q
    || || ||||| ||||    
T  26121338 tgtgttacttactttt 26121323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 774 - 804
Target Start/End: Original strand, 22755664 - 22755694
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtt 804  Q
    |||||||||||||||||||||||||||||||    
T  22755664 caatttttatctgtttgcaacagagcaagtt 22755694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 745
Target Start/End: Original strand, 24260560 - 24260617
Alignment:
Q  688 agtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttg 745  Q
    ||||||||||| ||| |||||||| ||||||||||| |||  |||| |||||||||||    
T  24260560 agtatcgtatccacaaggattgtcatttcgtccaaaaaatccgcgttacttatttttg 24260617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 771 - 860
Target Start/End: Complemental strand, 25402297 - 25402209
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    |||||||||||||||||||| || ||||  ||||| | | ||| |||||||||||||||| ||| |   ||||||||||||||| |||||    
T  25402297 ttgcaatttttatctgtttgtaatagaggtagtttcc-tatttctggttgcagaaaagtacgcaacatgtaggatttttcgaatgcccct 25402209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 101; Significance: 1e-49; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 669 - 857
Target Start/End: Original strand, 21301 - 21488
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||||||||||||||||||||| |||| |||||||||||| |||||||| |||||||   || || ||||||||||| ||||||| |||||||| ||    
T  21301 gtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaattcttgttacatatttttgtaagtttgacggtataaaagtta 21400  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
     |||||||||||||| |||||||||||||| |||||||| || |||||||| |||||||||||| |||| |||||||| ||||||||||    
T  21401 agttgcaatttttatttgtttgcaacagaggaagtttacctg-ttttggtttcagaaaagtaagtagcgattaggattcttcgaatccc 21488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 673 - 858
Target Start/End: Original strand, 25015 - 25199
Alignment:
Q  673 taaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggtt 772  Q
    |||| |||||||| |||||||||||  ||||| ||||||  |||||||||||||||   || |||||||||||||| ||||||| |||||||| || |||    
T  25015 taaaatgataagttgagtatcgtatacacaggaattgtctgttcgtccaaacaattattgttacttatttttgtaagtttgacggtataaaagttaagtt 25114  T
Q  773 gcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  25115 gcaatttttctctatttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcaacggttaggattcttcaaatcccc 25199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 2e-48; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 669 - 855
Target Start/End: Complemental strand, 16230016 - 16229831
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||||||  |||||||||||||||||| |||||||||||| ||| ||||  ||||||   || |||||||||||||| ||||| | |||||||| ||    
T  16230016 gtaataaagtagtaagtagagtatcgtatccacagggattgtccttttgtccttacaattctagttacttatttttgtaagtttgatggtataaaag-ta 16229918  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
     |||||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  16229917 agttgcaatttttatctgtttgcaacagagcgaatttacctgtttttggttgcaaaaaagtaagcagcggttaggattcttcgaatc 16229831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 645 - 863
Target Start/End: Original strand, 21301919 - 21302149
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || ||||||||||    
T  21301919 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagttacttattttt 21302018  T
Q  745 gtaattttgacgat---ataaaagata----------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    ||||  ||||||||   ||||||||||           |||| ||||||||||||||||||||||||||||||||| | |||||| |||||||||| |||    
T  21302019 gtaa-attgacgatataataaaagatatgggttagagtgttggaatttttatctgtttgcaacagagcaagtttacctttttttgattgcagaaaaataa 21302117  T
Q  832 gcagcggttaggatttttcgaatccccctgtt 863  Q
     |||||||||||||| ||||||||||||||||    
T  21302118 acagcggttaggattcttcgaatccccctgtt 21302149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 8770044 - 8770232
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||| |||||| |||| ||| |||||||| ||| |||  |||||||   || ||||| |||||||| ||||||  |||||||| ||    
T  8770044 gtaataaagtgataagtaaagtatcatatccacatggattgtccttttgtctgaacaattcttgttacttagttttgtaagtttgacagtataaaagtta 8770143  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  8770144 ggttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagcagttaggattcttcgaatcccc 8770232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 670 - 858
Target Start/End: Original strand, 8765143 - 8765330
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagatag 769  Q
    ||||||||||||||||| ||||||||||| ||| |||||||| ||| |||  |||||||   || ||||| |||||||| ||||||  |||||||| |||    
T  8765143 taataaagtgataagtaaagtatcgtatccacatggattgtccttttgtctgaacaattcttgttacttagttttgtaagtttgacagtataaaagttag 8765242  T
Q  770 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||| |||||||||||    
T  8765243 gttgcaatttttatatgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagcagttaagattcttcgaatcccc 8765330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 674 - 858
Target Start/End: Complemental strand, 12754981 - 12754797
Alignment:
Q  674 aaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttg 773  Q
    |||||||||| |||||||||||||| |||  ||||||| ||||||   |||||||  | | |||||||||||||| ||||||  |||||||| || |||     
T  12754981 aaagtgataattagagtatcgtatccacaatgattgtcctttcgtatgaacaattctctttacttatttttgtaactttgacagtataaaagttaagttt 12754882  T
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  12754881 caatttttatttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttaggattcttcgaatcccc 12754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 672 - 858
Target Start/End: Complemental strand, 17438502 - 17438305
Alignment:
Q  672 ataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata--- 768  Q
    ||||| |||||||||||||||| |||| ||| |||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||| | |||       
T  17438502 ataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgacgatataataaataaag 17438403  T
Q  769 ---------ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
             | ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  17438402 gtttagaaagcttgcaatttttatctgtttgcaacagagcaattttacctgtttt-ggttgcagaaaagtaagcaacggttaggattcttcgaatcccc 17438305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 629 - 857
Target Start/End: Original strand, 19908292 - 19908531
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||  ||||||||| ||||| ||||| |  ||||||| ||||||||| ||||||||||| ||| || | ||||||||||||||||||||    
T  19908292 tgatggtcggatattgcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaatt 19908391  T
Q  729 tgcgtaacttatttttgta-attttgacgatataaaagatagg----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 817  Q
      |||||| ||||||| |  | |||||||||||||||| || |          ||| ||||||||| | ||||||||| ||||||||||| | |||||||    
T  19908392 cacgtaacctattttttttcagtttgacgatataaaagttaagggttaaaagattggaatttttatttttttgcaacaaagcaagtttacctatttttgg 19908491  T
Q  818 ttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  19908492 ttgcagaaaagtaagcagcagttaggattcttcgaatccc 19908531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 645 - 857
Target Start/End: Original strand, 22349410 - 22349615
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||  | | ||||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattttt 22349509  T
Q  745 gtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||||  |||||  |||||||| |||||||||||||||||||||||||     ||||| ||||  |  |||| ||||||||||| ||| |||||||||| |    
T  22349510 gtaa-gttgacagtataaaagttaggttgcaatttttatctgtttgc-----agcaaatttatct-attttagttgcagaaaaataaacagcggttagaa 22349602  T
Q  845 tttttcgaatccc 857  Q
    |||||||||||||    
T  22349603 tttttcgaatccc 22349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 629 - 859
Target Start/End: Original strand, 12411136 - 12411373
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||| | ||||||||| |||||  |||| | ||||||||||||| |||||||||||||||| ||| ||||||||||||||| |||||||||    
T  12411136 tgatggtcggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatt 12411235  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagatagg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttgg 817  Q
    |  || |||||||||| ||| ||||| |||||||||| || |           ||||||||||||  ||||||||||| | ||||||||| ||  |||||    
T  12411236 taggttacttatttttctaagtttgatgatataaaagttaagggtttagaaatttgcaattttta--tgtttgcaacacaacaagtttacctg--tttgg 12411331  T
Q  818 ttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||| ||||||   ||||||||||| ||||||||||||    
T  12411332 ttgcagaacagtaagtgacggttaggattcttcgaatccccc 12411373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 656 - 854
Target Start/End: Original strand, 932754 - 932963
Alignment:
Q  656 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 755  Q
    |||| ||||||| |||||||| |||||| |||||||||||||| |||| ||||||| ||||||||||| ||||  | | |||||||||| ||| ||||||    
T  932754 aatcgtttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttatttttataagtttgac 932853  T
Q  756 gatataaaagata--ggttg----------caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 843  Q
    | |||||||| ||  ||||           |||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||     
T  932854 gttataaaagttaaaggtttaaaagacttacaatttttatttgtttgcaacagagcaagtttacttgtttt-ggttgcagaaaagtaagcagcggttagt 932952  T
Q  844 atttttcgaat 854  Q
    ||| |||||||    
T  932953 attcttcgaat 932963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 20023615 - 20023427
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaaga 766  Q
    |||||||||| | |||||| ||||| |||||||||||||||||| |||||||| |||||||    | |||||||||||||| |||||||| || |||||     
T  20023615 gtaataaagttagtaagtaaagtattgtatcaacagggattgtcctttcgtccgaacaattcttcttacttatttttgtaagttttgacggtacaaaagt 20023516  T
Q  767 taggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
     ||  |||||||||||||||||||||||||||| | |||||  | ||||||||||||||||||||| ||| ||||||||| || ||||||||    
T  20023515 gag--tgcaatttttatctgtttgcaacagagcgaatttaccag-ttttggttgcagaaaagtaagtagcagttaggattctttgaatcccc 20023427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 669 - 851
Target Start/End: Complemental strand, 27413957 - 27413778
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | ||||||||||||| |||| | |||||||||| ||||| |  |||||||   || ||||||||||||| ||| |||| |||||||| |    
T  27413957 gtaataaagttagtaagtagagtatcatatccaaagggattgtcctttcgactgaacaattcttgttacttatttttgtagttt-gacg-tataaaagtt 27413860  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcg 851  Q
      ||| |||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  27413859 --gttacaatttttatctgttttcaacagagcgattttacctgtttttggttgcagaaaagtaagcagcggttaggattcttcg 27413778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 683 - 858
Target Start/End: Complemental strand, 19910020 - 19909847
Alignment:
Q  683 agtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaattttta 782  Q
    |||||||||||||||| |||||||||||| |||| | | |||||||   || |||||||||||||| ||||||  |||||||| ||| ||||||||||||    
T  19910020 agtagagtatcgtatccacagggattgtcctttctttcgaacaattctagttacttatttttgtaagtttgaccgtataaaag-tag-ttgcaattttta 19909923  T
Q  783 tctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||| |||| || | |||   ||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||    
T  19909922 tctctttgtaaaaaagcgcatttacctgttttttgttgcagaaaagtaagcagcggttaggattctttgaatcccc 19909847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 656 - 858
Target Start/End: Original strand, 4650243 - 4650450
Alignment:
Q  656 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgac 755  Q
    |||| ||||| | ||||||||||||| |||| ||||||||||| |||||||||||| ||||| |||||||||| |||| |||||||      |  |||||    
T  4650243 aatcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt------aagttgac 4650336  T
Q  756 gatataaaagatagg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagg 843  Q
    |||| ||||| || |            |||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  4650337 gatacaaaagttaagggttaaaaagacttgcaatttttatctgtttgcaacggagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttagg 4650435  T
Q  844 atttttcgaatcccc 858  Q
    ||| |||||||||||    
T  4650436 attcttcgaatcccc 4650450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 629 - 743
Target Start/End: Complemental strand, 12806004 - 12805890
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | ||||||||| ||||| ||||| | ||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||||||    
T  12806004 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatt 12805905  T
Q  729 tgcgtaacttatttt 743  Q
    ||||| |||||||||    
T  12805904 tgcgttacttatttt 12805890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 8169910 - 8170096
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||||||  |||||| | ||||||||| |||| |||| |  |||||||| |||||||   || |||||||||||||| || |  | |||||||| ||    
T  8169910 gtaataaagtagtaagtaaaatatcgtatccacagagatttttctttcgtccgaacaattctagttacttatttttgtaagtt-gttggtataaaag-ta 8170007  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    | ||| ||||||||||||||||||||| ||| | ||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  8170008 g-ttgtaatttttatctgtttgcaacatagcgaatttacctgtttttggttgcagaaaagtatgcagcggttaggattcttcgaatcccc 8170096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 643 - 869
Target Start/End: Complemental strand, 16245829 - 16245593
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||| || || ||||| | ||||||||||||||||||||||||| |||| ||| ||||| || ||||||||||||||||  ||| ||||||||    
T  16245829 gacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaattctcgttacttattt 16245730  T
Q  743 ttgtaattttgacgata---taaaagat---agg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaa 827  Q
    | ||    ||||| |||   |||||||    |||         ||||||||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  16245729 tagt----ttgacaataaaataaaagagttaagggttagagatttgcaatttttatctatttgcaacagagcaagtt-acctgtttttggttgcagaaaa 16245635  T
Q  828 gtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||||||||||| ||| | ||||||||||| || |||||    
T  16245634 gtaagcagcggttagaattctccgaatccccctatttatatt 16245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 686 - 846
Target Start/End: Complemental strand, 19576265 - 19576107
Alignment:
Q  686 agagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatct 785  Q
    ||||||||||||| | | |||||||| |||||||| |||||||   || ||||| |||||||| ||| ||| |||||||| ||| |||||||||||||||    
T  19576265 agagtatcgtatccagatggattgtcctttcgtccgaacaattctagttacttacttttgtaagtttaacggtataaaag-tag-ttgcaatttttatct 19576168  T
Q  786 gtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    |||||||||| ||  | ||||| | |||||||||||||||||| |||||||||||||||||    
T  19576167 gtttgcaacaaagtgaatttacctatttttggttgcagaaaagcaagcagcggttaggatt 19576107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 771 - 859
Target Start/End: Complemental strand, 21303314 - 21303228
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  21303314 ttgcaatttttatctgtttgcaacagagcaagtt-acttgtttt-ggttgcagaaaagtaagcagcggttaggattatttgaatccccc 21303228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 669 - 846
Target Start/End: Complemental strand, 19925697 - 19925508
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    ||||||| |||||| ||||||||||||||| ||| |||||||| ||||||||||| |||| |||| |||||||||| | |  || |||||||||||  ||    
T  19925697 gtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttatttttattaagttaacgatataaaattta 19925598  T
Q  769 gg-------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
     |             |||||||||| || ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||    
T  19925597 agggttaaaagagacttgcaatttt-atatgtttgcaacagagcaagtttacctgttttggtttgcagaaaagtaagcagcggttaggatt 19925508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 685 - 857
Target Start/End: Original strand, 19167452 - 19167620
Alignment:
Q  685 tagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaatttttatc 784  Q
    |||||||||||||| ||| ||||| || |||||||| |||||||   || |||||||||||||| || |||  |||||||  | ||||||||||||||||    
T  19167452 tagagtatcgtatccacatggattatcctttcgtccgaacaattctagttacttatttttgtaagtt-gacagtataaaa--ttggttgcaatttttatc 19167548  T
Q  785 tgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
    ||||||||| | ||| | ||||| | ||||||||||||| |||||||||| ||||||||||| || |||||||    
T  19167549 tgtttgcaataaagcgaatttacctatttttggttgcag-aaagtaagcaacggttaggattatttgaatccc 19167620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 645 - 869
Target Start/End: Original strand, 41508368 - 41508602
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||  | |||||||||||||| ||||| |||||||||  | ||||||||||||| ||||||||||||||| | ||||||||||    
T  41508368 caagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcattacttattttt 41508467  T
Q  745 gtaattttgacgata---taaaagat---agg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagt 829  Q
       | ||||||||||   |||||||    |||         ||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  41508468 ---aatttgacgataaaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaagtt-acatgtttt-ggttgcagaaaagt 41508562  T
Q  830 aagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    || ||||||||| |||| || |||||||||| || |||||    
T  41508563 aaccagcggttaagattctttgaatccccctctttatatt 41508602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 669 - 765
Target Start/End: Complemental strand, 8889226 - 8889130
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaag 765  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||| | |||||||  ||| |||||||||||||| ||||||| ||||||||    
T  8889226 gtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttatttttgtaagtttgacggtataaaag 8889130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 669 - 775
Target Start/End: Complemental strand, 19171908 - 19171803
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||| |||| ||| |||  ||| |||||||||||||||||||||||||||| | |||||||||||| |  ||||||||||||||| ||    
T  19171908 gtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcattacttatttttgt-aggttgacgatataaaagtta 19171810  T
Q  769 ggttgca 775  Q
    |||||||    
T  19171809 ggttgca 19171803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 628 - 742
Target Start/End: Complemental strand, 31286129 - 31286017
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    |||||||||||||  ||||||||||| ||||| ||||| | ||||||||||| ||| |||| ||||||||| ||||||||||| ||||||||||||||||    
T  31286129 ctgatggtcggattagacaagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagggattgt-gtttcgtccaaacaat 31286032  T
Q  728 ttgcgtaacttattt 742  Q
    || ||| ||||||||    
T  31286031 ttccgttacttattt 31286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 761 - 858
Target Start/End: Complemental strand, 8883094 - 8882997
Alignment:
Q  761 aaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||| || |||||||||||||||||||||||||| ||| ||||||| | ||||| ||||||||||| ||||| || ||||||||| |||||||||||    
T  8883094 aaaagctaagttgcaatttttatctgtttgcaacatagcgagtttacctatttttagttgcagaaaattaagctgcagttaggattcttcgaatcccc 8882997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 645 - 743
Target Start/End: Complemental strand, 3116516 - 3116419
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||  ||||| | ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||  ||| |||||||||    
T  3116516 caagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttacttatttt 3116419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 669 - 742
Target Start/End: Complemental strand, 8557203 - 8557130
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||| |  ||||||||||||| ||||||||    
T  8557203 gtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 629 - 843
Target Start/End: Original strand, 20429695 - 20429920
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||  | || |||||| ||||  ||||| | |||||||| ||||||||||||||||||||| | | |||||||| |||| |||| ||||||    
T  20429695 tgatggtcggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaatt 20429794  T
Q  729 tgcgtaacttatttttgtaattttgacgat---ataaaaga-----------taggttgcaatttttatctgtttgcaacagagcaagtttacatgtttt 814  Q
     |||| |||||||||  ||| |||||||||   ||||||||            || ||||||||||||| ||||||||||||||||||||||  |  |||    
T  20429795 cgcgttacttatttt--taagtttgacgatataataaaagagtaagggttagaagtttgcaatttttatatgtttgcaacagagcaagtttatct-attt 20429891  T
Q  815 tggttgcagaaaagtaagcagcggttagg 843  Q
    ||||||||||||||||| ||| |||||||    
T  20429892 tggttgcagaaaagtaatcagtggttagg 20429920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 771 - 857
Target Start/End: Complemental strand, 12805850 - 12805766
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccc 857  Q
    |||||||||||||||||||||||||||| ||  |||| ||  ||||||||||||||||||||||| |||||||||| ||||||||||    
T  12805850 ttgcaatttttatctgtttgcaacagag-aaaattacctg-atttggttgcagaaaagtaagcaggggttaggattcttcgaatccc 12805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 743
Target Start/End: Original strand, 21325341 - 21325439
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||  ||||| | |||||||| ||||||||| ||||||||||| |||   ||||||||||||||||||||||||| || |||||||||    
T  21325341 caagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttacttatttt 21325439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 645 - 726
Target Start/End: Original strand, 10744903 - 10744984
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaa 726  Q
    ||||| ||| ||||| ||||| | ||||||||||||||||||||||||||| || | |||||||||||||||||| ||||||    
T  10744903 caagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtctaaacaa 10744984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 775 - 860
Target Start/End: Original strand, 5508477 - 5508562
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtt--aggatttttcgaatccccct 860  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||| ||| ||||  |||||| |||||||||||||    
T  5508477 aatttttatctgtttgcaatagagcaag-ttacatgttttttgttgcagaaaagtaa-cagtggttagaggattcttcgaatccccct 5508562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 645 - 725
Target Start/End: Original strand, 10917919 - 10917999
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 725  Q
    ||||||||| ||||| ||||| |  ||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||||    
T  10917919 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaaca 10917999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 643 - 743
Target Start/End: Complemental strand, 18736771 - 18736672
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||||| ||||| ||||| | |||||||||| ||||||||| ||||||||| |||||  ||||||||||||| |||||| | |||| ||||||||    
T  18736771 gacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttcgtctaaacaactcgcgttacttattt 18736673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 771 - 869
Target Start/End: Complemental strand, 2167577 - 2167481
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||||||||||||||||||||| | |||||| || |||||| |||||  |||||||||| || |||||||||| ||||||||||||| || |||||    
T  2167577 ttgcaatttttatctgtttgcaacataccaagtt-acctgtttt-ggttgtggaaaagtaagaagtggttaggattcttcgaatccccctatttatatt 2167481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 655 - 728
Target Start/End: Complemental strand, 821602 - 821529
Alignment:
Q  655 aaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||| ||||| | |||||||||||||||||||||||||||||| ||| ||||| |||||||||  ||||||||    
T  821602 aaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaatt 821529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 728
Target Start/End: Complemental strand, 2167716 - 2167632
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||| ||||| || || | |||||||||||||||||||||||||||||| |||   | |||||||||||||||||||||    
T  2167716 gacaagtgtaccaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaatt 2167632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 771 - 860
Target Start/End: Original strand, 10745040 - 10745127
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||| |||||||||||||||| |||| || ||||||||||||||| ||||||| | ||||  | |||||||||||||||    
T  10745040 ttgcaatttttatctatttgcaacagagcaag-ttacctg-ttttggttgcagaaatgtaagcaacagttaaaaattttcgaatccccct 10745127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 643 - 716
Target Start/End: Original strand, 12759386 - 12759459
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    ||||||||||| ||||  ||||| | |||||||||||||||||||||||||||||| ||| | |||||||||||    
T  12759386 gacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgtttc 12759459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 771 - 858
Target Start/End: Original strand, 17155931 - 17156015
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||||||||||||||||||   |  | |||||||||||||||||||| |||| |||||| | || ||||||||    
T  17155931 ttgcaatttttatctgtttgcaacagagcaagtt---acctatttggttgcagaaaagtaagtagcgattaggactatttgaatcccc 17156015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 669 - 738
Target Start/End: Original strand, 28728969 - 28729038
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaactt 738  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||  |||||||||| |||| ||||    
T  28728969 gtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttactt 28729038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 771 - 831
Target Start/End: Complemental strand, 3116380 - 3116321
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaa 831  Q
    ||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||    
T  3116380 ttgcaatttttatctgtttgcaacagagcaag-atacctggttttggttgcagaaaagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 646 - 742
Target Start/End: Complemental strand, 21825965 - 21825870
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    |||||||| ||||| |||||   ||||||||||| |||||||||||||||||| ||| ||||| | |||||||||||||| || |||| ||||||||    
T  21825965 aagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttacttattt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 771 - 858
Target Start/End: Original strand, 21325480 - 21325565
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||| |||||||||||||||| |||| |   |||||||||||||||||||| |||||||| |||| |||| ||||||    
T  21325480 ttgcaatttttatctatttgcaacagagcaag-ttacct-aatttggttgcagaaaagtaagtagcggttatgattcttcgcatcccc 21325565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 743
Target Start/End: Original strand, 5508337 - 5508434
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||| | | ||||||||||||||||| ||||||  |||| ||| ||||||||||||||||||||||  | |||| |||||||||    
T  5508337 caagtgtaccaaatcatttgccaagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatctcgcgttacttatttt 5508434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 743
Target Start/End: Complemental strand, 21303452 - 21303354
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||  ||||| ||||| |  ||||||| ||||||||||||||||||| | |||  |||||| ||||| |||||||||||| ||| |||||||||    
T  21303452 caagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttacttatttt 21303354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 802 - 858
Target Start/End: Complemental strand, 7495045 - 7494989
Alignment:
Q  802 gtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||| |||||||||||| |||||||||||||| | |||||||| |||||||||||    
T  7495045 gtttacctgtttttggttgtagaaaagtaagcagggattaggattattcgaatcccc 7494989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 656 - 728
Target Start/End: Original strand, 8319051 - 8319123
Alignment:
Q  656 aatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||| ||||| | ||||| |||||||||||||| ||| ||||| ||||||||| ||||||||| |||||||||    
T  8319051 aatcgtttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaatt 8319123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 775 - 841
Target Start/End: Complemental strand, 2723790 - 2723727
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggtta 841  Q
    ||||||||||||||||||||| |||||| |||| ||  |||||||||| ||||||||||||||||||    
T  2723790 aatttttatctgtttgcaacaaagcaag-ttacctg--tttggttgcaaaaaagtaagcagcggtta 2723727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 771 - 866
Target Start/End: Original strand, 8445960 - 8446053
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcat 866  Q
    |||||||||||||| |||||||||||| |||||| || |   || ||||||||||| |||||||| |||||||||| || |||||||||| |||||    
T  8445960 ttgcaatttttatcagtttgcaacagaacaagtt-acctccatt-ggttgcagaaatgtaagcagtggttaggattctttgaatccccctattcat 8446053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 775 - 846
Target Start/End: Complemental strand, 18736628 - 18736559
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    ||||||||| |||||||||| || |||||| || |||||| |||||||||||| ||||||||||||||||||    
T  18736628 aatttttatttgtttgcaaccgaacaagtt-acctgtttt-ggttgcagaaaaataagcagcggttaggatt 18736559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 718
Target Start/End: Original strand, 6289887 - 6289977
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgt 718  Q
    |||||||||||||  | ||| ||||  ||||| ||||| | ||||||||||||||||||||||||| |||| ||| ||||| || ||||||    
T  6289887 ctgatggtcggattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgt 6289977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 716
Target Start/End: Complemental strand, 13908322 - 13908253
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    |||||||| ||||||||| | || |||||||||||||||||||||||| |||| | ||||||| |||||||    
T  13908322 aagtgtaccaaatcttttccaag-taataaagtgataagtagagtatcatatccatagggattatcgtttc 13908253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 771 - 832
Target Start/End: Complemental strand, 21825829 - 21825770
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaag 832  Q
    |||||||||||||||||||| |||| |||||| |||| | ||||||||||||||||||||||    
T  21825829 ttgcaatttttatctgtttgtaacatagcaag-ttacct-tttttggttgcagaaaagtaag 21825770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 698
Target Start/End: Complemental strand, 18458524 - 18458469
Alignment:
Q  643 gacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatc 698  Q
    ||||||||||| ||||  ||||  | ||||||||||||||||||||||||||||||    
T  18458524 gacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatc 18458469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 800 - 855
Target Start/End: Complemental strand, 19171799 - 19171744
Alignment:
Q  800 aagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    |||||||  ||||||| |||||||||||||| |||| |||||||||| ||||||||    
T  19171799 aagtttatctgttttttgttgcagaaaagtatgcagtggttaggattcttcgaatc 19171744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 785 - 859
Target Start/End: Original strand, 8143767 - 8143838
Alignment:
Q  785 tgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    ||||||||||||| |||||| || |||||| ||||||||||| ||||||| ||||||||||| || |||||||||    
T  8143767 tgtttgcaacagaacaagtt-acctgtttt-ggttgcagaaa-gtaagcaacggttaggattcttggaatccccc 8143838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 669 - 723
Target Start/End: Original strand, 8445848 - 8445901
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    ||||||||||| |||||||||||| || || ||| ||||||||||||||||||||    
T  8445848 gtaataaagtg-taagtagagtattgtgtccacatggattgtcgtttcgtccaaa 8445901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 647 - 725
Target Start/End: Original strand, 10923150 - 10923228
Alignment:
Q  647 agtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 725  Q
    ||||||| ||||| ||||| | ||||||||||||||| || ||||||||||| ||  ||||||| ||||| || |||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatccacgaggattgttgtttcatctaaaca 10923228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 687 - 744
Target Start/End: Complemental strand, 7495151 - 7495094
Alignment:
Q  687 gagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    |||||||| ||| ||| |||| ||||||||||||||||||||  ||| ||||||||||    
T  7495151 gagtatcgaatccacatggatcgtcgtttcgtccaaacaattaacgttacttattttt 7495094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 93; Significance: 8e-45; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 897 - 696
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||||||||||||||| |  | |||||||||||||||||||||||   ||| |||||||||| ||| |||||||||||||||||||    
T  897 gtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttatttttataagtttgacgatataaaagata 798  T
Q  769 gg------------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcc 856  Q
     |            |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||| |||| |||||| ||    
T  797 agggtttagaaagattgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcagaaaagtaagaagcggttaagattcttcgaaccc 698  T
Q  857 cc 858  Q
    ||    
T  697 cc 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 645 - 846
Target Start/End: Original strand, 69914 - 70125
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||| ||||| ||||| | |||||||||||| ||||| ||||||||||  ||| |||||||||||||||||||||||||  ||| ||||||||||    
T  69914 caagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttattttt 70013  T
Q  745 gtaattttgacgatataaaagat-----------aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 833  Q
    || || |||| ||||||||||||           |||||||||||||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  70014 gt-atgttgatgatataaaagataaaggttagaaaggttgcaatttttatttgtttgcaatagagcaagtttacctgtttttggttgtagaaaagtaagc 70112  T
Q  834 agcggttaggatt 846  Q
    ||| |||||||||    
T  70113 agcagttaggatt 70125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 88; Significance: 8e-42; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 684 - 858
Target Start/End: Original strand, 482 - 655
Alignment:
Q  684 gtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaa-ttttgacgatataaaagataggttgcaattttta 782  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||   || | |||||||||||| |||||||  |||||||| || |||||||||||||    
T  482 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttgtaagttttgacagtataaaag-taagttgcaattttta 580  T
Q  783 tctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  581 tctgtttgcaacagagcgaatttacctgtttt-ggttgcagaaaagtaagcagcggttaggattcttcgaatcccc 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 3556 - 3744
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||   || |||||||||||||| ||||||| | |||||| ||    
T  3556 gtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttgtaagtttgacggtgtaaaagtta 3655  T
Q  769 ggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||| |||||||||||||||||| | ||||| ||  |||| ||| |||||   ||||||| ||||||||| |||||||||||    
T  3656 ggttgcaattttcatctgtttgcaacagagcgaatttacctg-ctttgattggagaaagtaaagcagcagttaggattcttcgaatcccc 3744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 68; Significance: 7e-30; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 76442 - 76629
Alignment:
Q  669 gtaataaagtga-taagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat 767  Q
    |||||||||| | ||||||||||||| |||| |||||||||||  |||||||| |||||||   || ||||||||||||| ||  || | |||||||| |    
T  76442 gtaataaagttagtaagtagagtatcatatccacagggattgttctttcgtccgaacaattcttgttacttatttttgtagtt--gagggtataaaagtt 76539  T
Q  768 aggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    || |||||| |||||| ||||| ||||| ||||| ||||| |||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  76540 ag-ttgcaaattttatatgtttacaacatagcaaatttacctgtttttggttgtagaaaagtaagcaccgattaggattcttcgaatcccc 76629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 682 - 858
Target Start/End: Complemental strand, 6764 - 6589
Alignment:
Q  682 aagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagataggttgcaattttt 781  Q
    |||||||||||| |||| ||||||| |||   ||||||| |||||||   || || || |||| ||| ||||| ||||||||||  || |||||||||||    
T  6764 aagtagagtatcatatccacagggactgttcattcgtccgaacaattctagttacctagttttataagtttgatgatataaaagtgag-ttgcaattttt 6666  T
Q  782 atctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    |||||||||||| ||||  | ||||| ||||||||||| || |||||||||||||||| |||||| |||||||||||    
T  6665 atctgtttgcaatagagtgaatttacttgtttttggtttcaaaaaagtaagcagcggtcaggattcttcgaatcccc 6589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 738 - 858
Target Start/End: Complemental strand, 6098 - 5979
Alignment:
Q  738 tatttttgtaattttgacgatataaaagataggttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcg 837  Q
    ||||||||||| ||||| | ||||||||  || ||||||||||||||||||||||| ||||| | ||||| |||||||||||| ||||||||||| | ||    
T  6098 tatttttgtaagtttgaaggtataaaagtgag-ttgcaatttttatctgtttgcaatagagcgaatttacttgtttttggttgtagaaaagtaagtaacg 6000  T
Q  838 gttaggatttttcgaatcccc 858  Q
    || |||||| |||||||||||    
T  5999 gtcaggattcttcgaatcccc 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 771 - 858
Target Start/End: Original strand, 72148 - 72235
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||  || |||||| |||||||||||    
T  72148 ttgcaatttttatctgtttgcaacagagcaagtttacgtatttttagttgcagaaaagtaagcagtagtaaggattcttcgaatcccc 72235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 645 - 727
Target Start/End: Original strand, 729 - 811
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaat 727  Q
    ||||||||| ||||| ||||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  729 caagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaat 811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 860
Target Start/End: Original strand, 871 - 954
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||| ||||||||||||||| |||  ||| ||  |||||||| |||||| |||||||||||||||| | || ||||||||||    
T  871 caatttttacctgtttgcaacagagtaag-atacctg--tttggttgtagaaaactaagcagcggttaggactctttgaatccccct 954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 669 - 858
Target Start/End: Complemental strand, 463 - 263
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagat- 767  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||| |  ||||| | |||  |||||||||||||||||     
T  463 gtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaattctcgttagatatttatataa-gttgacgatataaaagata 365  T
Q  768 -agg-----------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
     |||           |||||||||||||||| |||||| |||||||| | || |||||||||||  |||||  |||||||| ||||||||| ||||||||    
T  364 aagggttagaaagtcttgcaatttttatctgcttgcaatagagcaag-taacctgtttttggttttagaaatataagcagccgttaggattcttcgaatc 266  T
Q  856 ccc 858  Q
    |||    
T  265 ccc 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 669 - 793
Target Start/End: Original strand, 234366 - 234490
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
    |||||||||||||||||| ||||||||| | |||| ||||||| |||||||| |||||||   || |||||||||||||| ||| ||  |||||||| ||    
T  234366 gtaataaagtgataagtatagtatcgtacccacagagattgtcctttcgtccgaacaattcttgtcacttatttttgtaagtttaactctataaaagtta 234465  T
Q  769 ggttgcaatttttatctgtttgcaa 793  Q
      |||||||||||||||||||||||    
T  234466 tattgcaatttttatctgtttgcaa 234490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 629 - 768
Target Start/End: Complemental strand, 48304 - 48169
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||||||||| ||| ||||  ||||| ||||| | ||||||||||||||||||||||||||||||   | ||||||||  |||||||||||||||    
T  48304 tgatggtcggatatggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc--tatggattgtcaattcgtccaaacaatt 48207  T
Q  729 tgcgtaacttatttttgtaattttgacgatataaaagata 768  Q
      | | ||||||||||||||  |||||||| |||||||||    
T  48206 ctc-ttacttatttttgtaa-gttgacgatgtaaaagata 48169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 629 - 743
Target Start/End: Original strand, 54845 - 54960
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcg-tttcgtccaaacaat 727  Q
    ||||||||||||  |  |||||||| ||||| ||||| | |||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||| |      
T  54845 tgatggtcggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagc 54944  T
Q  728 ttgcgtaacttatttt 743  Q
    |||||| |||||||||    
T  54945 ttgcgttacttatttt 54960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 774 - 869
Target Start/End: Original strand, 55003 - 55097
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    |||||||||| ||||||| ||| |||||||| || |||||||||||||| ||||| || ||  |||||||| | || |||||||||| || |||||    
T  55003 caatttttatttgtttgcgacatagcaagtt-acctgtttttggttgcacaaaagaaaacactggttaggactctttgaatccccctatttatatt 55097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 771 - 858
Target Start/End: Original strand, 15785 - 15871
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||||  |||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  15785 ttgcaatttttatcaatttgcaacagagcaagtt-acctgtttttggttgcggaaaagtaagcagcggttagtattcttcgaatcccc 15871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 650 - 869
Target Start/End: Complemental strand, 36088 - 35857
Alignment:
Q  650 gtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttttgtaat 749  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||| |||||| |||| | || |||||||||   ||     
T  36088 gtactaaatcatttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttatttt---aag 35992  T
Q  750 tttgacgatataa---aagat----agg---------ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagc 833  Q
    |||||||||| ||   ||||     |||         ||||||||||||||| |||| |||| || ||||| || || ||||||||||||||||||||||    
T  35991 tttgacgataaaatataagagttaaagggttagagatttgcaatttttatctatttggaacaaagaaagtt-acctgattttggttgcagaaaagtaagc 35893  T
Q  834 agcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||||||||| || |||||||||| || |||||    
T  35892 agcggttaggattcttagaatccccctatttatatt 35857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 6e-21; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 771 - 859
Target Start/End: Original strand, 39724 - 39810
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccc 859  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| || | || |||||||||    
T  39724 ttgcaatttttatctgtttgcaacagagcaag-ttacctg-ttttggttgcagaaaagtaagcagcggttatgactctttgaatccccc 39810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 723
Target Start/End: Original strand, 39585 - 39663
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    ||||||||| ||||  ||||| | ||||||||||||||||||||| |||||||| |||  |||||| |||| |||||||    
T  39585 caagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaa 39663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 645 - 859
Target Start/End: Original strand, 3154 - 3370
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgta-acttatttt 743  Q
    ||||||||| ||||  ||||| | ||||||||||| || ||||||||||||||| ||| |||||||| |||| |||||| |||||| | | ||  |||||    
T  3154 caagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccacacggattgtcatttcatccaaaaaatttggggatacaaatttt 3252  T
Q  744 tgtaattttgacgatataaa----agatag--gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcg 837  Q
    ||    | ||||||||||||    |||| |  |||||||||||||| |||||| || ||||||| ||||| |||||||||||  ||||||||||||||||    
T  3253 tgg---tctgacgatataaataaaagatggaagttgcaatttttatttgtttgtaatagagcaa-tttacctgtttttggttatagaaaagtaagcagcg 3348  T
Q  838 gttaggatttttcgaatccccc 859  Q
    |||| ||||||| |||||||||    
T  3349 gttatgattttttgaatccccc 3370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 774 - 869
Target Start/End: Complemental strand, 168256 - 168162
Alignment:
Q  774 caatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||| || || ||||||||| | || ||||||||||||| |||||    
T  168256 caatttttatctgtttgcaacagagcaag-ttacttgtttttggttgtagaaaaggaaacaacggttaggactctttgaatccccctgtttatatt 168162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 628 - 716
Target Start/End: Complemental strand, 168413 - 168326
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttc 716  Q
    ||||||||| |||  | ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  168413 ctgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttc 168326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 770 - 860
Target Start/End: Original strand, 3771 - 3861
Alignment:
Q  770 gttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccct 860  Q
    ||||||||||||||||| | |||||| || |||||||| | |||||| |||||||||||||||| |||||||||||| ||| |||||||||    
T  3771 gttgcaatttttatctgctcgcaacatagaaagtttacctatttttgtttgcagaaaagtaagctgcggttaggattcttccaatccccct 3861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 6e-18; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 771 - 846
Target Start/End: Original strand, 69218 - 69293
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 846  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||   ||||||||| ||||||||||||||||||    
T  69218 ttgcaatttttatctgtttgcaacagagaaagtttacctgttcttacatgcagaaaaataagcagcggttaggatt 69293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 744
Target Start/End: Original strand, 69106 - 69181
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    ||||||||||||||||| ||| |||||||| ||| ||||||||  ||  |||||||||||||| |  |||||||||    
T  69106 gtaataaagtgataagttgagaatcgtatccacaaggattgtcactttctccaaacaatttgcattgcttattttt 69181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 81488 - 81570
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||| ||||||||| ||||| |  |||||||||||||||||| |||| ||||| ||| ||||||| |||||||| ||| ||||    
T  81488 caagtttacgaaatcgtttaccaaataataaagtgataagtag-gtattgtatccacatggattgtggtttcgtcaaaataatt 81570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 771 - 869
Target Start/End: Complemental strand, 43187 - 43090
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatccccctgttcatatt 869  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||  ||  |||||||| || | || ||||||||||||| |||||    
T  43187 ttgcaatttttatctgtttgcaacagagcaag-ttacctgtttttggttacagaaaacaaaatagcggttaagactctttgaatccccctgtttatatt 43090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 669 - 725
Target Start/End: Complemental strand, 43301 - 43245
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaaca 725  Q
    |||||||||||||||||| |||| |||||| ||| |||||||||||||||| |||||    
T  43301 gtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaaca 43245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 645 - 742
Target Start/End: Original strand, 6288 - 6385
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    ||||||||  ||||| ||||| | |||||||||| ||||||| ||||||||||| ||| ||||||| ||||||||||||||||| || | ||||||||    
T  6288 caagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattacttattt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0941 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0941
Description:

Target: scaffold0941; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 309 - 393
Target Start/End: Original strand, 1518 - 1606
Alignment:
Q  309 agatcaaaggttggtcctcccaaaccttttagatga-gtgc---tattggaacttcagaggtttatctaatactcccacaaaattagct 393  Q
    ||||||||||||||| ||||||| |||||||||||| ||||   ||||||||||| ||||||||| ||||| |||| ||||||||||||    
T  1518 agatcaaaggttggtgctcccaagccttttagatgaagtgcctttattggaacttaagaggtttagctaattctcctacaaaattagct 1606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 645 - 743
Target Start/End: Original strand, 2371 - 2469
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||| |  |||||||| |||||||||||||||||||| ||| |||||| | |||| ||||||||||| |||| | |||||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattatttt 2469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 645 - 743
Target Start/End: Original strand, 2402 - 2500
Alignment:
Q  645 caagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||| ||||| ||||| |  |||||||| |||||||||||||||||||| ||| |||||| | |||| ||||||||||| |||| | |||||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattatttt 2500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 669 - 743
Target Start/End: Original strand, 35562 - 35636
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    ||||||||||||||| |||||||| ||||| ||| ||||| ||||||||||||||||||| || | |||||||||    
T  35562 gtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttatttt 35636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 771 - 858
Target Start/End: Original strand, 35677 - 35762
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatcccc 858  Q
    ||||||||||||| ||| ||||||| |||||||| || |||||| ||||||||||| |||||||||||||| |||| ||| |||||||    
T  35677 ttgcaatttttatttgtctgcaacaaagcaagtt-acctgtttt-ggttgcagaaaggtaagcagcggttaagattcttcaaatcccc 35762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 629 - 743
Target Start/End: Complemental strand, 89967 - 89854
Alignment:
Q  629 tgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    ||||||||| ||  ||||||||||  ||||| ||||| | ||||||||||| ||||||||||||| |||| ||| | |||||||||||||| |||||| |    
T  89967 tgatggtcgaattagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttcgtctaaacaact 89869  T
Q  729 tgcgtaacttatttt 743  Q
     |||| |||||||||    
T  89868 cgcgttacttatttt 89854  T

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Target: scaffold0043; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 775 - 844
Target Start/End: Complemental strand, 89809 - 89742
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||||| |||||||||||||| || |||||| || |||||| |||||||||||| ||||||||||||||||    
T  89809 aatttctatctgtttgcaaccgaacaagtt-acctgtttt-ggttgcagaaaaataagcagcggttagga 89742  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 670 - 742
Target Start/End: Original strand, 11266 - 11338
Alignment:
Q  670 taataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattt 742  Q
    |||||||||||||||||||||||| |||| ||| ||||||| |||||  ||||||||||||| | ||||||||    
T  11266 taataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcattacttattt 11338  T

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Target: scaffold0019; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 723
Target Start/End: Complemental strand, 181804 - 181726
Alignment:
Q  644 acaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaa 723  Q
    |||||||||| |||||  |||| | ||||||||||||||| | |||||||||||| |||  ||||||||||| |||||||    
T  181804 acaagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttttgtccaaa 181726  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 714
Target Start/End: Complemental strand, 15580 - 15494
Alignment:
Q  628 ctgatggtcggatatgacaagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtt 714  Q
    |||||||||||||  | ||||||||  ||||| ||||| | |||||||||| ||| ||||||||||||||| ||| |||||||||||    
T  15580 ctgatggtcggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccacatggattgtcgtt 15494  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 775 - 844
Target Start/End: Original strand, 114631 - 114699
Alignment:
Q  775 aatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttagga 844  Q
    ||||||||||||||||||||||| ||| || || |||||||||||||||||||| || || |||||||||    
T  114631 aatttttatctgtttgcaacagaccaaatt-acctgtttttggttgcagaaaaggaaacaacggttagga 114699  T

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Target: scaffold0351 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 771 - 855
Target Start/End: Complemental strand, 5724 - 5641
Alignment:
Q  771 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc 855  Q
    ||||||||||||||||||||||| ||| ||| || || |||||||||||| ||||||| || || ||||||||||| || |||||    
T  5724 ttgcaatttttatctgtttgcaatagaccaaatt-acctgtttttggttgtagaaaaggaaacaacggttaggattctttgaatc 5641  T

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Target: scaffold0672 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 669 - 728
Target Start/End: Original strand, 1759 - 1818
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||||| ||  ||||||||    
T  1759 gtaaaaaagtgataagtagagtatcgtatccacaggaattgtcgttttgtgtaaacaatt 1818  T

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Target: scaffold0427 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 680 - 743
Target Start/End: Complemental strand, 2881 - 2818
Alignment:
Q  680 ataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttatttt 743  Q
    |||||| |||||||||||| ||| | ||||||||||||||||||||||| | || |||||||||    
T  2881 ataagttgagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttatttt 2818  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 744
Target Start/End: Original strand, 29909 - 30006
Alignment:
Q  646 aagtgtacgaaatcttttactaggtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatttgcgtaacttattttt 744  Q
    |||||||| ||||| ||||| | ||||||||||| |||||||||||| ||||| | || ||||||||| ||   |||||||||| ||| ||||||||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatggtatccatagagattgtcgtatctgtcaaacaatttacgttacttattttt 30006  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 728
Target Start/End: Complemental strand, 7486 - 7427
Alignment:
Q  669 gtaataaagtgataagtagagtatcgtatcaacagggattgtcgtttcgtccaaacaatt 728  Q
    |||||||||||||||||||||||| ||||  ||| | |||||||||| ||| ||||||||    
T  7486 gtaataaagtgataagtagagtattgtatttacaagaattgtcgtttggtctaaacaatt 7427  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 36600 - 36512
Alignment:
Q  309 agatcaaaggttggtcctcccaaaccttttagatga-gtgc---tattggaacttcagaggtttatctaatactcccacaaaattagct 393  Q
    |||||||||||| || ||||||| | ||||| |||| ||||   ||||||||||| ||||||||| ||||| |||| ||||||||||||    
T  36600 agatcaaaggttcgtgctcccaagcattttatatgaagtgcatttattggaacttaagaggtttagctaattctcctacaaaattagct 36512  T

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