View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16697_high_11 (Length: 439)
Name: NF16697_high_11
Description: NF16697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16697_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 4 - 383
Target Start/End: Original strand, 15570457 - 15570836
Alignment:
| Q |
4 |
gtgagaagaaatttgatgcatctatgaataaacttgaaagaccttcaccaagaagagggccatctcatcatgctgaaagaatgagtcctatgattagtac |
103 |
Q |
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| T |
15570457 |
gtgaaaagaaatttgatgcatctatgaataaacttgaaagaccttcaccaagaagagggccatctcttcatgctgaaagaatgagtcctatgattagtac |
15570556 |
T |
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| Q |
104 |
tggtactatggcacaaggtagaggttcaccatttggataaaaattagttatctaatgtctttagattatttgataattaattatgtttatgtaattgttc |
203 |
Q |
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| T |
15570557 |
tggtactatggcacaaggtagaggttcaccatttggataaaaattagttatctaatgtctttagattatttgataattaattatgtttatgtaattgttc |
15570656 |
T |
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| Q |
204 |
ctttgttgtgaaactctcttaggtatgatatctagggttttaaatttggtcttggaaattatcatgttcttatgaggtataatgccttgcatggcaaacc |
303 |
Q |
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| T |
15570657 |
ctttgttgtgaaactctcttaggtatgatatctagggttttaaatttggtcttggaaattatcatgttcttatgaggtataatgccttgcatggcaaacc |
15570756 |
T |
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| Q |
304 |
aaagtttcaattattctaactatgatataattaaagcactttaaatgtgcctagttaatgtgagcattctcacttgtatg |
383 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15570757 |
aaagtttcaattattctaactatgatataattaaagcactttaaatgtgcctagttaatgtgagcattctcacttgtatg |
15570836 |
T |
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