View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16697_high_13 (Length: 430)
Name: NF16697_high_13
Description: NF16697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16697_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 412
Target Start/End: Complemental strand, 31836287 - 31835861
Alignment:
| Q |
1 |
acctagtttcaatatgtttgctcctatcatgagatacaggattcttcgctaaatttatcgttgacttgttatcaaataggagcttttataggccttttca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31836287 |
acctagtttcaatatgtttgctcctatcatgagatacaggattcttcgctaaatttatcgttgacttgttatcaaataggagcttttataggccttttca |
31836188 |
T |
|
| Q |
101 |
cttcaatcttcaattcctgcatcagtgaatctaaccaggcagcttgacaagctgcaagagatccttatgatgatcaccttttcg---------------t |
185 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
31836187 |
cttcaatcttcaattcctgcatcagtgaatctaaccaggcagcttgacaagctgcaagagatccttatgatgatcaccttttcgatcttatcttcctcgt |
31836088 |
T |
|
| Q |
186 |
gtcagtggtgatcattcatcttcttttcaatcacttagtatgttttcaatttctttcttggtttttggtttgtatttctaaaatgactcttgtaaaatgc |
285 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |
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| T |
31836087 |
gtcagtggtgatcattcatcttcttttcaatcacttagtatgttttcaatttctttcttggtttttggtttgtgtttctagaatgactcttgtaaattgc |
31835988 |
T |
|
| Q |
286 |
ttgaaaaattgaactctataaggtattttctattcttgagtttgttggttaacatcttggagaaagcttttggagcatgtatcaaaagactcttgtttgt |
385 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
31835987 |
ttgaaaaattgaactctataaggtattttctattcttgagtttgttggttaacatcttggagaaagcttttggagcatgtatcaaaagactctcgtttgt |
31835888 |
T |
|
| Q |
386 |
atttgtatggtttgttaatcctttagg |
412 |
Q |
| |
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||||| ||||||||||||||||||||| |
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|
| T |
31835887 |
atttgaatggtttgttaatcctttagg |
31835861 |
T |
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