View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16697_high_28 (Length: 265)

Name: NF16697_high_28
Description: NF16697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16697_high_28
NF16697_high_28
[»] chr1 (40 HSPs)
chr1 (20-248)||(31235911-31236135)
chr1 (20-248)||(17359174-17359398)
chr1 (20-248)||(12208613-12208838)
chr1 (22-225)||(25405516-25405715)
chr1 (45-248)||(9401542-9401742)
chr1 (20-232)||(15543845-15544053)
chr1 (20-248)||(17610118-17610343)
chr1 (24-159)||(13345282-13345419)
chr1 (20-225)||(16179019-16179220)
chr1 (24-106)||(17837533-17837615)
chr1 (20-209)||(14779577-14779763)
chr1 (22-123)||(21666590-21666693)
chr1 (20-123)||(24281289-24281391)
chr1 (31-123)||(29242542-29242636)
chr1 (20-245)||(33190689-33190909)
chr1 (20-106)||(3591654-3591740)
chr1 (166-239)||(21987865-21987938)
chr1 (20-232)||(22664218-22664427)
chr1 (33-165)||(51473816-51473950)
chr1 (20-108)||(16787725-16787813)
chr1 (20-108)||(21449101-21449189)
chr1 (22-106)||(24306307-24306390)
chr1 (19-109)||(22622901-22622991)
chr1 (20-106)||(34480981-34481067)
chr1 (20-108)||(18736239-18736327)
chr1 (20-128)||(23037991-23038098)
chr1 (143-239)||(16916817-16916909)
chr1 (31-123)||(147654-147745)
chr1 (163-239)||(16069433-16069508)
chr1 (20-104)||(21847646-21847729)
chr1 (20-108)||(21987981-21988069)
chr1 (166-241)||(14781735-14781810)
chr1 (20-157)||(15813104-15813241)
chr1 (31-110)||(22620285-22620364)
chr1 (166-241)||(22623046-22623120)
chr1 (144-232)||(29242644-29242727)
chr1 (166-228)||(25403973-25404035)
chr1 (166-239)||(18736123-18736196)
chr1 (20-104)||(12012803-12012887)
chr1 (20-56)||(27117769-27117805)
[»] chr2 (38 HSPs)
chr2 (20-245)||(29719097-29719318)
chr2 (20-248)||(15339250-15339475)
chr2 (20-248)||(17349369-17349585)
chr2 (24-218)||(31804791-31804983)
chr2 (26-218)||(25618574-25618762)
chr2 (20-232)||(17743355-17743563)
chr2 (20-248)||(27908981-27909206)
chr2 (20-227)||(11382636-11382840)
chr2 (20-248)||(17675491-17675717)
chr2 (20-248)||(17635637-17635862)
chr2 (20-165)||(20174575-20174722)
chr2 (20-108)||(45621880-45621968)
chr2 (24-245)||(32085479-32085695)
chr2 (20-219)||(13776351-13776545)
chr2 (19-122)||(25196021-25196127)
chr2 (20-165)||(29027508-29027655)
chr2 (132-248)||(25887766-25887877)
chr2 (26-237)||(28925539-28925747)
chr2 (143-239)||(29143086-29143177)
chr2 (144-224)||(30411804-30411880)
chr2 (166-227)||(12953227-12953288)
chr2 (20-108)||(30411690-30411778)
chr2 (20-107)||(25885460-25885546)
chr2 (24-116)||(25888216-25888303)
chr2 (144-248)||(26603223-26603321)
chr2 (31-113)||(12953288-12953370)
chr2 (20-106)||(45553142-45553228)
chr2 (31-108)||(25535297-25535374)
chr2 (26-109)||(9774333-9774414)
chr2 (31-107)||(27418389-27418465)
chr2 (189-239)||(17198034-17198084)
chr2 (181-239)||(26667464-26667522)
chr2 (25-106)||(23011764-23011844)
chr2 (31-108)||(24090925-24091002)
chr2 (166-239)||(25196166-25196238)
chr2 (31-108)||(25530470-25530547)
chr2 (143-237)||(25920389-25920479)
chr2 (166-242)||(17890093-17890167)
[»] chr6 (40 HSPs)
chr6 (20-232)||(27737567-27737776)
chr6 (24-200)||(22410238-22410410)
chr6 (20-224)||(23844351-23844552)
chr6 (20-159)||(23143734-23143874)
chr6 (81-248)||(14079320-14079483)
chr6 (22-237)||(17826969-17827177)
chr6 (34-232)||(28933539-28933733)
chr6 (20-141)||(9516797-9516919)
chr6 (20-237)||(27124368-27124579)
chr6 (20-237)||(21907444-21907660)
chr6 (20-257)||(12183185-12183418)
chr6 (20-165)||(21679790-21679938)
chr6 (20-106)||(9726034-9726120)
chr6 (19-244)||(11176961-11177183)
chr6 (20-100)||(17729164-17729244)
chr6 (20-165)||(21672374-21672522)
chr6 (20-245)||(23645633-23645854)
chr6 (34-107)||(4339761-4339834)
chr6 (23-108)||(23231982-23232067)
chr6 (20-232)||(5624652-5624861)
chr6 (20-87)||(20005899-20005966)
chr6 (94-248)||(6630554-6630705)
chr6 (24-128)||(18075367-18075471)
chr6 (25-106)||(22566163-22566244)
chr6 (131-239)||(20005789-20005894)
chr6 (19-107)||(21688795-21688883)
chr6 (20-106)||(17299832-17299918)
chr6 (74-157)||(20002338-20002423)
chr6 (22-103)||(24251530-24251611)
chr6 (20-165)||(8241289-8241434)
chr6 (169-248)||(14637026-14637104)
chr6 (21-87)||(19244598-19244664)
chr6 (23-105)||(25927305-25927387)
chr6 (32-107)||(9838380-9838455)
chr6 (190-233)||(18075288-18075331)
chr6 (144-248)||(25781915-25782014)
chr6 (20-79)||(28586058-28586117)
chr6 (31-108)||(22413048-22413125)
chr6 (20-80)||(17382157-17382217)
chr6 (166-218)||(17382224-17382275)
[»] chr8 (33 HSPs)
chr8 (25-237)||(13314865-13315074)
chr8 (20-229)||(18448423-18448629)
chr8 (24-248)||(24114146-24114365)
chr8 (20-227)||(29382244-29382448)
chr8 (96-157)||(14626118-14626179)
chr8 (20-165)||(14528161-14528308)
chr8 (31-123)||(27659468-27659562)
chr8 (32-164)||(6884982-6885115)
chr8 (19-209)||(17509257-17509442)
chr8 (20-236)||(19786743-19786956)
chr8 (20-165)||(34497127-34497275)
chr8 (25-232)||(25182306-25182510)
chr8 (20-106)||(24904645-24904731)
chr8 (20-159)||(30806438-30806584)
chr8 (25-248)||(24269615-24269833)
chr8 (31-106)||(30122156-30122230)
chr8 (20-106)||(5850953-5851039)
chr8 (26-254)||(21314641-21314865)
chr8 (166-248)||(26394562-26394642)
chr8 (31-107)||(2637621-2637697)
chr8 (50-165)||(13697897-13698014)
chr8 (20-123)||(17101875-17101980)
chr8 (20-106)||(44011025-44011110)
chr8 (31-108)||(23893200-23893277)
chr8 (25-106)||(24644855-24644935)
chr8 (96-128)||(26394661-26394693)
chr8 (20-76)||(30783772-30783828)
chr8 (166-209)||(17101806-17101849)
chr8 (31-106)||(17976642-17976717)
chr8 (20-87)||(24110675-24110742)
chr8 (166-232)||(18569210-18569275)
chr8 (24-105)||(15238815-15238896)
chr8 (20-109)||(25226148-25226237)
[»] chr3 (39 HSPs)
chr3 (20-232)||(21301930-21302140)
chr3 (26-254)||(17438287-17438512)
chr3 (22-248)||(16245593-16245814)
chr3 (20-232)||(41508379-41508587)
chr3 (54-154)||(7478288-7478388)
chr3 (24-209)||(20429726-20429908)
chr3 (24-209)||(3116321-3116501)
chr3 (20-245)||(21303220-21303441)
chr3 (17-239)||(932751-932970)
chr3 (20-165)||(12805830-12805977)
chr3 (19-237)||(4650242-4650451)
chr3 (31-227)||(19925505-19925699)
chr3 (24-123)||(19171816-19171917)
chr3 (31-209)||(5508359-5508532)
chr3 (26-165)||(2167557-2167698)
chr3 (73-154)||(7495048-7495129)
chr3 (24-165)||(21325356-21325500)
chr3 (20-108)||(22349421-22349509)
chr3 (161-237)||(12754796-12754872)
chr3 (143-232)||(16229832-16229917)
chr3 (166-237)||(8765261-8765331)
chr3 (31-102)||(28728967-28729038)
chr3 (20-106)||(821515-821601)
chr3 (20-62)||(6289915-6289957)
chr3 (26-108)||(12411169-12411251)
chr3 (19-108)||(8770030-8770119)
chr3 (166-239)||(8770163-8770235)
chr3 (19-123)||(8319050-8319153)
chr3 (20-232)||(19908319-19908528)
chr3 (24-79)||(12759403-12759458)
chr3 (20-107)||(18736672-18736758)
chr3 (32-106)||(8557130-8557204)
chr3 (20-106)||(10917930-10918016)
chr3 (20-106)||(21825870-21825955)
chr3 (169-227)||(27413780-27413838)
chr3 (166-239)||(8170026-8170099)
chr3 (31-108)||(8889151-8889228)
chr3 (20-57)||(10744914-10744951)
chr3 (181-237)||(19909846-19909902)
[»] chr7 (60 HSPs)
chr7 (20-248)||(16365717-16365942)
chr7 (25-248)||(5108583-5108801)
chr7 (25-225)||(3329542-3329740)
chr7 (20-209)||(2563830-2564016)
chr7 (21-245)||(7318286-7318507)
chr7 (20-248)||(15869607-15869831)
chr7 (20-248)||(8978868-8979093)
chr7 (24-248)||(39273038-39273258)
chr7 (20-128)||(12329694-12329802)
chr7 (32-209)||(7492164-7492338)
chr7 (20-219)||(9731518-9731714)
chr7 (26-248)||(4785854-4786077)
chr7 (31-232)||(1848106-1848303)
chr7 (20-237)||(10586897-10587111)
chr7 (25-245)||(3734613-3734829)
chr7 (20-108)||(13759859-13759947)
chr7 (24-232)||(17153032-17153237)
chr7 (24-106)||(9864327-9864409)
chr7 (20-209)||(19153310-19153493)
chr7 (20-209)||(20752709-20752892)
chr7 (20-159)||(2350692-2350834)
chr7 (20-182)||(1587693-1587854)
chr7 (20-247)||(8053926-8054145)
chr7 (20-106)||(18662453-18662539)
chr7 (26-123)||(4818854-4818950)
chr7 (31-108)||(11803103-11803180)
chr7 (20-123)||(9574419-9574521)
chr7 (20-107)||(31492942-31493029)
chr7 (20-106)||(4579110-4579195)
chr7 (20-123)||(8054471-8054576)
chr7 (24-232)||(18368857-18369063)
chr7 (19-128)||(1584555-1584662)
chr7 (20-108)||(11221163-11221251)
chr7 (20-123)||(3191044-3191146)
chr7 (20-164)||(4986567-4986713)
chr7 (20-164)||(4990665-4990811)
chr7 (20-237)||(6042473-6042676)
chr7 (20-156)||(12181620-12181759)
chr7 (166-239)||(16058904-16058977)
chr7 (20-232)||(20582271-20582476)
chr7 (20-93)||(23099966-23100039)
chr7 (31-247)||(8877444-8877657)
chr7 (187-242)||(7397317-7397372)
chr7 (20-107)||(10648590-10648677)
chr7 (20-106)||(10584487-10584573)
chr7 (134-232)||(9131038-9131131)
chr7 (144-246)||(13418659-13418756)
chr7 (39-245)||(6013624-6013825)
chr7 (20-79)||(10937614-10937673)
chr7 (31-106)||(16306717-16306792)
chr7 (20-106)||(9245193-9245279)
chr7 (20-66)||(21227191-21227237)
chr7 (31-108)||(4449003-4449080)
chr7 (190-239)||(4449146-4449195)
chr7 (166-239)||(11803224-11803296)
chr7 (31-108)||(17203047-17203123)
chr7 (26-79)||(21102321-21102374)
chr7 (37-106)||(22339312-22339381)
chr7 (190-242)||(10584349-10584401)
chr7 (19-123)||(13418544-13418651)
[»] chr4 (36 HSPs)
chr4 (20-219)||(17216829-17217027)
chr4 (20-232)||(13908866-13909075)
chr4 (20-209)||(13128774-13128961)
chr4 (32-248)||(17336997-17337210)
chr4 (20-232)||(14648907-14649115)
chr4 (20-209)||(15164779-15164963)
chr4 (20-248)||(7582309-7582534)
chr4 (26-248)||(24639324-24639535)
chr4 (20-239)||(19562046-19562265)
chr4 (20-108)||(13692668-13692756)
chr4 (20-194)||(16730316-16730486)
chr4 (20-106)||(20315012-20315098)
chr4 (20-248)||(19492574-19492787)
chr4 (20-123)||(12578251-12578353)
chr4 (20-182)||(17672014-17672174)
chr4 (20-164)||(5679217-5679363)
chr4 (20-106)||(19882652-19882738)
chr4 (20-236)||(19929549-19929762)
chr4 (20-108)||(21323874-21323962)
chr4 (20-209)||(20829640-20829825)
chr4 (20-106)||(25121227-25121312)
chr4 (31-107)||(11490555-11490631)
chr4 (24-104)||(13992879-13992959)
chr4 (31-159)||(19092318-19092448)
chr4 (108-156)||(13992029-13992077)
chr4 (26-143)||(19636548-19636667)
chr4 (25-159)||(8969674-8969803)
chr4 (159-238)||(12406575-12406654)
chr4 (20-209)||(17709769-17709951)
chr4 (20-79)||(15047140-15047199)
chr4 (20-79)||(15107225-15107284)
chr4 (166-237)||(17026217-17026288)
chr4 (20-157)||(22175911-22176049)
chr4 (191-247)||(11935237-11935293)
chr4 (173-209)||(13692582-13692618)
chr4 (82-248)||(40227849-40228011)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-232)||(168177-168385)
[»] scaffold0155 (1 HSPs)
scaffold0155 (20-248)||(35857-36082)
[»] chr5 (34 HSPs)
chr5 (20-248)||(17431895-17432119)
chr5 (20-165)||(19004168-19004313)
chr5 (20-232)||(24245422-24245631)
chr5 (20-123)||(25550487-25550591)
chr5 (20-245)||(22755533-22755755)
chr5 (19-209)||(20315331-20315518)
chr5 (19-109)||(39434473-39434563)
chr5 (39-164)||(25402278-25402405)
chr5 (24-159)||(34487654-34487791)
chr5 (20-107)||(24266955-24267041)
chr5 (20-107)||(24343586-24343672)
chr5 (20-123)||(15375864-15375969)
chr5 (19-109)||(24140453-24140543)
chr5 (76-232)||(20744548-20744699)
chr5 (20-157)||(15690790-15690928)
chr5 (142-209)||(20563993-20564056)
chr5 (19-232)||(34128647-34128856)
chr5 (20-107)||(18208249-18208335)
chr5 (20-123)||(19283840-19283942)
chr5 (166-232)||(15375773-15375839)
chr5 (20-106)||(17185475-17185561)
chr5 (143-241)||(16523672-16523766)
chr5 (190-239)||(17314984-17315033)
chr5 (20-105)||(19086181-19086266)
chr5 (31-108)||(23388837-23388914)
chr5 (166-239)||(28664917-28664989)
chr5 (31-107)||(17171553-17171629)
chr5 (20-79)||(24167612-24167671)
chr5 (20-106)||(24852173-24852259)
chr5 (31-108)||(20858708-20858785)
chr5 (171-227)||(24140596-24140651)
chr5 (52-108)||(24260560-24260616)
chr5 (24-108)||(26120881-26120964)
chr5 (20-108)||(36175146-36175233)
[»] scaffold0638 (1 HSPs)
scaffold0638 (26-248)||(684-904)
[»] scaffold0035 (1 HSPs)
scaffold0035 (20-227)||(69925-70128)
[»] scaffold0001 (1 HSPs)
scaffold0001 (26-254)||(69099-69323)
[»] scaffold0008 (2 HSPs)
scaffold0008 (20-248)||(54872-55097)
scaffold0008 (20-64)||(48233-48277)
[»] scaffold0024 (1 HSPs)
scaffold0024 (25-245)||(39601-39818)
[»] scaffold0062 (1 HSPs)
scaffold0062 (31-232)||(43105-43303)
[»] scaffold0102 (1 HSPs)
scaffold0102 (20-245)||(35549-35771)
[»] scaffold0622 (1 HSPs)
scaffold0622 (20-123)||(740-843)
[»] scaffold0043 (1 HSPs)
scaffold0043 (20-107)||(89854-89940)
[»] scaffold0111 (1 HSPs)
scaffold0111 (122-227)||(3749-3850)
[»] scaffold1869 (1 HSPs)
scaffold1869 (21-181)||(317-475)
[»] scaffold0650 (1 HSPs)
scaffold0650 (20-106)||(6299-6385)
[»] scaffold0056 (2 HSPs)
scaffold0056 (19-108)||(21287-21376)
scaffold0056 (166-227)||(25130-25190)
[»] scaffold0019 (2 HSPs)
scaffold0019 (26-107)||(181706-181786)
scaffold0019 (34-106)||(11266-11338)
[»] scaffold0016 (1 HSPs)
scaffold0016 (31-108)||(3554-3631)
[»] scaffold0671 (1 HSPs)
scaffold0671 (143-239)||(567-658)
[»] scaffold0653 (1 HSPs)
scaffold0653 (20-106)||(4484-4570)
[»] scaffold0386 (1 HSPs)
scaffold0386 (142-237)||(5978-6069)
[»] scaffold0351 (2 HSPs)
scaffold0351 (182-232)||(5642-5692)
scaffold0351 (188-232)||(152-196)
[»] scaffold0128 (1 HSPs)
scaffold0128 (36-106)||(592-662)
[»] scaffold0090 (1 HSPs)
scaffold0090 (20-94)||(7425-7499)
[»] scaffold0054 (1 HSPs)
scaffold0054 (166-248)||(72165-72247)
[»] scaffold0002 (1 HSPs)
scaffold0002 (182-232)||(114659-114709)


Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 31236135 - 31235911
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31236135 aatcgtttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 31236036  T
Q  120 ataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    |||||||||||||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31236035 ataataaaatataagggttagagagttgcaatttttatctct----ttgcaacagagcaagtttacttgtttttggttgcataaaagtaagcaacggtta 31235940  T
Q  220 agattctttgaattccctctatttatatt 248  Q
    |||||||||||||||||||||||||||||    
T  31235939 agattctttgaattccctctatttatatt 31235911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 17359174 - 17359398
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||||||||  |||||||||||| | || ||||||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  17359174 aatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataattctcgttacttatttttaggttgacgat 17359273  T
Q  120 ataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    ||||||||| |||||||||||||||||||||||||||||    |||| |||||| ||||| ||||| |||||||||||||||||||||||    ||||||    
T  17359274 ataataaaagataagggttagagagttgcaatttttatc----tgctggcaacatagcaaatttacctgtttttggttgcataaaagtaagatgcggtta 17359369  T
Q  220 agattctttgaattccctctatttatatt 248  Q
     ||||||| |||| |||||||||||||||    
T  17359370 ggattcttcgaatcccctctatttatatt 17359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 12208613 - 12208838
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||| ||| ||||||||| |||  ||||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  12208613 aatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttatttttgtaagttgacg 12208712  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |||||| || ||| |||||||||| | ||| || |||| |||    || |||||||||||||||||||| || |||| | |||| |||||||| || |||    
T  12208713 atataa-aagataaaagggttagaaaggtttcagttttaatc----tgtttgcaacagagcaagtttacctg-ttttagctgcagaaaagtaagcagcgg 12208806  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| ||||||| |||| ||| |||||||||||    
T  12208807 ttaggattcttcgaatcccccctatttatatt 12208838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 225
Target Start/End: Complemental strand, 25405715 - 25405516
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgat 119  Q
    |||||||| |||||||||||||||||| | |||||| |||| |||| ||||||||||| ||||||| | ||| |||||||||||||  ||||||||||||    
T  25405715 tcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttatttttgtaagttgacgat 25405616  T
Q  120 ataataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    |||  ||| | ||||||||||| || ||||||||||||    |||| |||||||||||||||||||||||||||||||||||  ||||||| || |||||    
T  25405615 ata--aaagtttaagggttagaaagcttgcaattttta----tttgtttgcaacagagcaagtttacttgtttttggttgca-gaaagtaagcagcggtt 25405523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 248
Target Start/End: Original strand, 9401542 - 9401742
Alignment:
Q  45 taagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacgatataataaaatataagggttagag 142  Q
    |||| |||||||| |||| |||   |||||||||| ||||||| ||||||||||||||||||||  ||||||  |||||||||||| |||| ||||||||    
T  9401542 taagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttttgtaagttgttgatataataaaagataacggttagag 9401641  T
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatt 242  Q
    ||||||||||||||||    || ||||||||||| |||||||| || |||||||| || ||||||||  | |||||| ||||||| |||| |||||||||    
T  9401642 agttgcaatttttatc----tgtttgcaacagagtaagtttacctg-ttttggttacaaaaaagtaagtagcggttaggattcttcgaatcccctctatt 9401736  T
Q  243 tatatt 248  Q
    ||||||    
T  9401737 tatatt 9401742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 15544053 - 15543845
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactta--tttttaagttgacg 117  Q
    |||||||||| |||||||||||||||||| |||||||| |||| ||    |||||||||| ||||||| |||||| ||||||||  ||||||| ||||||    
T  15544053 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttatttttttaatttgacg 15543954  T
Q  118 atataataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||   |||||| ||||||||| | ||||||||||||||||    |||| |||||||| || |||||||| ||||||| |||||| |||||||| ||||||    
T  15543953 at---ataaaagataagggttaaaagagttgcaattttta----tttgtttgcaacatagtaagtttacctgttttttgttgcagaaaagtaagcaacgg 15543861  T
Q  217 ttaagattctttgaat 232  Q
    ||| ||||||| ||||    
T  15543860 ttaggattcttcgaat 15543845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 17610343 - 17610118
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||||||||| |||||||||||| ||||| |||||||| |||| |||  ||||||||||| ||||||| ||||| |||||||||||||  |||| |||||    
T  17610343 aatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgac 17610244  T
Q  117 gatataataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    |||   ||||||  ||| ||||||| || ||| ||||||||    | || |||||||||||||||||||| |||||||||||||| |||||||| || ||    
T  17610243 gat---ataaaagttaaaggttagaaagcttgtaattttta----tatgtttgcaacagagcaagtttacctgtttttggttgcagaaaagtaagcagcg 17610151  T
Q  216 gttaagattctttgaattccctctatttatatt 248  Q
    |||| |||||||||||  ||| || ||||||||    
T  17610150 gttaggattctttgaaacccccctttttatatt 17610118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 13345419 - 13345282
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||||| |||||||||||||||||| ||||||||||||| |||  ||||||||||||||||||| |||||||||||||||||| ||  ||||||||| ||    
T  13345419 gtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaa 13345320  T
Q  124 taaaata--taagggttagagagttgcaatttttatct 159  Q
    ||||| |  ||| ||||| ||| ||||| |||||||||    
T  13345319 taaaagagttaaaggttaaagatttgcagtttttatct 13345282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 16179019 - 16179220
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacg 117  Q
    |||||||||  |||||||||| ||||||| |||||||| |||| | || ||  ||||||| ||||||| |||||  |||||||||||||  |||||||||    
T  16179019 aatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttgtaagttgacg 16179118  T
Q  118 atataataaaatataagggttaga-gagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||||||   ||||||||||||||| |  |||||||||||||||    | |||||||||||||||||||| | |||||||||||| |||||||| || |||    
T  16179119 atataa---aatataagggttagatgtcttgcaatttttatct----gattgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcgg 16179211  T
Q  217 ttaagattc 225  Q
    ||| |||||    
T  16179212 ttaggattc 16179220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 17837533 - 17837615
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||| |||||||||||| ||||| ||||||||||||| |||| ||||||| ||||||| ||| ||||||||||||||||||    
T  17837533 gtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgttacttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 14779577 - 14779763
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||| ||||| ||||||||| |||||||  ||||||||||||| |||  ||||||||||| ||||||| |  |||||||| |||||||  ||||||||||    
T  14779577 aatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttatttttgtaagttgacg 14779676  T
Q  118 atataataaaatataagggttag-agagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||| |||| | || |||||| || |||||||||||||    |||| || ||||| | |||||||||||| ||||||||| | ||||||||    
T  14779677 atataa-aaaagaaaaaggttagaagggttgcaattttta----tttgtttacaacatatcaagtttacttg-ttttggttgaagaaaagtaa 14779763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 21666693 - 21666590
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgat 119  Q
    ||||| || |||||||||||||||||| |||||||| |||| |||  ||||||| ||| ||||||| ||||| |||||||||||||  ||||||||||||    
T  21666693 tcgttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataagttgacgat 21666594  T
Q  120 ataa 123  Q
    ||||    
T  21666593 ataa 21666590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 24281289 - 24281391
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| ||| ||||||||| |||  |||| ||||||| ||| || |||| |||||||||| |||||||||||| ||    
T  24281289 aatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttactta-ttttaagttgacaat 24281387  T
Q  120 ataa 123  Q
    ||||    
T  24281388 ataa 24281391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 29242542 - 29242636
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgatataa 123  Q
    |||||||||||||||||| |||||||| |||| | | ||||||||||||  |||||| |||||||||||| ||||||  ||||||||||||||||    
T  29242542 aagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatatttttgtaagttgacgatataa 29242636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 33190689 - 33190909
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  |||||||||| ||||||| ||||||| ||||| ||||  ||||||||||  || ||| || ||| |||||||| |||||||||||||||    
T  33190689 aatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaactcgtgttactta-ttttaagttgacgat 33190787  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  |||||||||  ||||| ||||||| ||| ||||||||    |||| ||||||||| |||||||  || |  |||| ||||| |||||||| || ||    
T  33190788 ataaaataaaatagttaaggtttagaga-ttgtaattttta----tttgtttgcaacagtgcaagttacctgg--tttgattgcagaaaagtaagcagcg 33190880  T
Q  216 gttaagattctttgaattccctctatttat 245  Q
    |||| ||||||||| | |||||||||||||    
T  33190881 gttaggattctttgga-tccctctatttat 33190909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 3591740 - 3591654
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||  |||||||||||||||||  |||||||| |||| |||  ||||||||||||||||||| ||||||| ||||||||||    
T  3591740 aatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaattcgccttacttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 21987938 - 21987865
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| || |||| | |||||||||||| ||||||    
T  21987938 ttgcaacagagcaactttacctgtttttggttgcataaaagtaagcagcggtaaggattctttgaataccctct 21987865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 22664218 - 22664427
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| ||   |||| || ||| ||| ||| || ||||||| |||| |||||||||||||||    
T  22664218 aatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgctta-ttttaagttgacgat 22664316  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | |||||||||||  | ||||||||||||    |||| ||| ||||||||||| |||| || ||||||||||| ||||||||  | ||    
T  22664317 ataaaataaaagagataagggttagtaaattgcaattttta----tttgtttgtaacagagcaag-ttacatg-ttttggttgcagaaaagtaagtagcg 22664410  T
Q  216 gttaagattctttgaat 232  Q
    |||| || |||||||||    
T  22664411 gttaggactctttgaat 22664427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 165
Target Start/End: Complemental strand, 51473950 - 51473816
Alignment:
Q  33 gtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaa---t 129  Q
    |||||||||||||||| |||||||| |||| | |  ||||||||||||||||||| |||| ||||||||| ||||| ||| ||| ||| |||||||   |    
T  51473950 gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgttttt-agtcgacaataaaataaaagagt 51473852  T
Q  130 ataagggttagagagttgcaatttttatctttttgc 165  Q
      || ||||||||| ||||||||||||||| |||||    
T  51473851 taaaaggttagagatttgcaatttttatctgtttgc 51473816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 16787813 - 16787725
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||  |||||||||||||||||| |||||||| |||  |||  ||||||||||||| ||||| |||| |||||||||||||||    
T  16787813 aatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttacttattttt 16787725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 21449101 - 21449189
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||| ||||||||||| | ||||| ||||   |||||||||||||    
T  21449101 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgttacttattttt 21449189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 24306390 - 24306307
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||| |||||||||||||||||| |||||||| |||| |||  ||||| |||||   ||||||||||||||||||||||||    
T  24306390 tcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcgcgttacttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 22622901 - 22622991
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    |||||||| || ||||||||||||||| || |||||||||||||   |  ||||||| ||| ||||||| ||||||||||||||| |||||    
T  22622901 caatcgttgaccaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgttacttaatttta 22622991  T

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Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 34480981 - 34481067
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| ||| ||| ||||| ||||||| |||| |||  ||||||  ||||| |||||||||||    
T  34480981 aatcgtttaccaagtaataaagtgataagtagaatattatatccacaatgactgtcatttcatccaaaacattcgtgttacttattt 34481067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 18736327 - 18736239
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||  |||||||||||||||||| || ||||| |||| |||  ||||||||||| || |||| ||||  ||||||||||||||    
T  18736327 aatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttattttt 18736239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 23038098 - 23037991
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||||||||  ||||||| |||| |||  ||||||||||| ||| ||| || || ||||||||||||| |  |||| |||    
T  23038098 aatcgtttaccaagtaataaagtgataag-tgagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttacttattttaagtttgatgat 23038000  T
Q  120 ataataaaa 128  Q
    | |||||||    
T  23037999 aaaataaaa 23037991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 16916909 - 16916817
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||||||||| |||||    |||||||| | ||||| |||||||||||||| |||||||| || ||| || ||||||| |||| ||||||    
T  16916909 agttgcaatttttatctctttgc----aacagagcgaatttacctgtttttggttgcagaaaagtaagcagcgggtaggattcttcgaatcccctct 16916817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 147654 - 147745
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    ||||||||||||||||||  |||||||||||  |||  ||||||| ||| ||| ||| |  |||||||||||| |||||| ||||||||||||    
T  147654 aagtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcgttactta-ttttaatttgacgatataa 147745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 16069508 - 16069433
Alignment:
Q  163 tgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||||||||||||||| || ||||||||| | |||||||| || | |||| ||||||| |||| ||||||    
T  16069508 tgcttgcaacagagcaagtttacctg-ttttggttgtagaaaagtaagcagcagttaggattcttcgaataccctct 16069433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 21847646 - 21847729
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttat 104  Q
    |||||||||| ||||||||||||  |||| |||||||  |||| |||  ||||||||||| ||||||| ||||| ||||||||||    
T  21847646 aatcgtttaccaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtccaaacaattcacgttacttat 21847729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 21988069 - 21987981
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||| ||||| || ||||||||||||||| |||||||| ||||  |   ||||||| ||| ||||||  ||||||||||||||||||||    
T  21988069 aatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttattttt 21987981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 14781810 - 14781735
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctat 241  Q
    ||||| |||||||| ||||| |||||||||||||| |||||| | || | |||| ||||||| |||| ||||||||    
T  14781810 ttgcatcagagcaaatttacctgtttttggttgcagaaaagtgatcagcagttaggattcttcgaatcccctctat 14781735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 15813241 - 15813104
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  | ||||||||||||||||  || |||| |||| |||| |||| |||||  ||||||| || || ||||||||| |||||| ||||||||    
T  15813241 aatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaactctcgttactta-ttttaatttgacgat 15813144  T
Q  120 ataataaa-atataagggtt-agagagttgcaatttttat 157  Q
    | |||||| | ||||||||| ||||  |||||||||||||    
T  15813143 aaaataaagagataagggttaagaggtttgcaatttttat 15813104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 22620285 - 22620364
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaa 110  Q
    |||||||||||||||||  |||||||| |||| | |   |||||| ||| ||| ||||||||| ||||||||||||||||    
T  22620285 aagtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttacttatttttaa 22620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 22623046 - 22623120
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctat 241  Q
    |||||||||||||||||||| || ||||||||||| |||||||| || | |||| |||||||  ||| ||||||||    
T  22623046 ttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagctgttaggattcttcaaatcccctctat 22623120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 29242644 - 29242727
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||||||||||||||| |||||    |||||||||||||||| || ||||||||||| ||||||||  | |||||| ||| ||||||||    
T  29242644 gttgcaatttttatctgtttgc----aacagagcaagtttacctg-ttttggttgcaaaaaagtaagaagcggttaggatactttgaat 29242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 25404035 - 25403973
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattcttt 228  Q
    |||||||||||||| ||||| ||||||||||| || ||||||||  | |||||| ||||||||    
T  25404035 ttgcaacagagcaactttacctgtttttggttccagaaaagtaagtagcggttaggattcttt 25403973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 18736196 - 18736123
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||| ||||||||||||| | |||||||||||| |||||||  || |||| | ||||||| |||| ||||||    
T  18736196 ttgcaatagagcaagtttacctatttttggttgcagaaaagtaggcagcggtaaggattcttcgaatcccctct 18736123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 12012887 - 12012803
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttat 104  Q
    |||||||||  ||||| |||||||||||| |||||||  |||| |||   ||||||||||| || |||  |||||||||||||||    
T  12012887 aatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttttatctaaactattcgcgttacttat 12012803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 27117805 - 27117769
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtat 56  Q
    |||||||||| |||||||||||||||||| |||||||    
T  27117805 aatcgtttaccaagtaataaagtgataagtagagtat 27117769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 29719318 - 29719097
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| ||| |||| |||| |||| ||||||||||| || |||| |||||||||||||||||||||  |||||| |    
T  29719318 aatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgttacttatttttagtttgacggt 29719219  T
Q  120 ataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    |||||||||||||||||||||||||||||||||||||    | ||  ||||||||||||||||||| ||| |||||||||| |||||||| || | ||||    
T  29719218 ataataaaatataagggttagagagttgcaattttta----tatgtatgcaacagagcaagtttacctgtgtttggttgcagaaaagtaagcagcagtta 29719123  T
Q  220 agattctttgaattccctctatttat 245  Q
     ||||||| |||| ||||||||||||    
T  29719122 ggattcttcgaatcccctctatttat 29719097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 15339250 - 15339475
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactta-tttttaagttgacga 118  Q
    |||| ||||| |||||||||||||| ||| ||||||||||||| |||  ||||||||||| ||||||| |||| |||||||||| ||| |||||| | ||    
T  15339250 aatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgttacttactttgtaagttaagga 15339349  T
Q  119 tataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    |||||||||| |||||||||||||||||||||||||||    |||| |||||||||||||||||||  ||||||| |||||| |||||||| || | |||    
T  15339350 tataataaaagataagggttagagagttgcaattttta----tttgtttgcaacagagcaagtttatctgttttttgttgcagaaaagtaagcagcagtt 15339445  T
Q  219 aagattctttgaattccctctatttatatt 248  Q
    | |||||||  ||| |||||||||||||||    
T  15339446 aggattcttcaaatcccctctatttatatt 15339475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 17349369 - 17349585
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt-taagttgacga 118  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||| ||||||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  17349369 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttattttgtaagttgacga 17349467  T
Q  119 tataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    |||||||||| ||||||        |||||||||||||||    || ||||||||||||||||||||||||||||||||||| |||||||| || ||||     
T  17349468 tataataaaagataagg--------gttgcaatttttatc----tgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagcagcggtc 17349555  T
Q  219 aagattctttgaattccctctatttatatt 248  Q
    |  |||||| |||| |||||||||||||||    
T  17349556 agaattcttcgaatcccctctatttatatt 17349585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 31804983 - 31804791
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacgatat 121  Q
    |||||| || ||||||||||||||| |||||||  |||| |||  ||||| ||||| ||||||  |||  | |||||||||||||  |||||||||||||    
T  31804983 gtttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatctgtgttacttatttttgtaagttgacgatat 31804884  T
Q  122 aataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    ||||||| |||||||||||||||||||||||||||    |||| |||||| | ||||| ||||| |||||||||||||| |||||||| || |||||    
T  31804883 aataaaagataagggttagagagttgcaattttta----tttgtttgcaataaagcaaatttacctgtttttggttgcagaaaagtaagcagcggtt 31804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 25618574 - 25618762
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| |||||||||||||||||| ||||||||||||| |||  ||||||||||| ||| ||| ||||||||| |||||||||| ||||||||||||||||    
T  25618574 ttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgtaacttattttt-agttgacgatataata 25618672  T
Q  126 aaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    ||| |   ||  |||||||| ||||||||||||||    || ||||||||||| |||||||| || ||||||||||| |||||||| || |||||    
T  25618673 aaagagtgaaaagttagagatttgcaatttttatc----tgtttgcaacagagaaagtttacctg-ttttggttgcagaaaagtaagcagcggtt 25618762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 17743563 - 17743355
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aag-ttgac 116  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||| |||||| ||||||| |||||| |||||||||||||  ||| || ||    
T  17743563 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttatttttgcaagtttaac 17743464  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |||   ||||||  |||||||||||||||||||||||||||||||    |||||||  ||||||||||| |||||||||||| | ||||| || |  |||    
T  17743463 gat---ataaaagttaagggttagagagttgcaatttttatcttt----ttgcaactaagcaagtttacctgtttttggttgtagaaaaggaagccgcgg 17743371  T
Q  217 ttaagattctttgaat 232  Q
    ||| |||| |||||||    
T  17743370 ttaggattatttgaat 17743355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 27909206 - 27908981
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  | || | ||||  |||||| ||||| |||||||||||||  |||| |||||    
T  27909206 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttatttttgtaagtttgac 27909107  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||||||| ||  || ||||||||||  |||||||||||||||    || |||||||||||||||||||| || ||||||||||| |||| ||| || |||    
T  27909106 gatataa-aagttaaaagggttagaacgttgcaatttttatc----tgtttgcaacagagcaagtttacctg-ttttggttgcagaaaattaagcagcgg 27909013  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| ||||||| |||| ||| |||||||||||    
T  27909012 ttaggattcttcgaatcccccctatttatatt 27908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 11382840 - 11382636
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |  ||||||||||||||| ||||||||||||| |||   |||||  |||  ||||||||||||||||||||||||||||  ||||||||    
T  11382840 aatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataattcgcgttacttatttttagtttgacgat 11382741  T
Q  120 ataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    |  |||||| |  |||  |||||||| |||||| |||||||    || ||||||||||||||| |||||||||||| |||| | ||||||||||||  ||    
T  11382740 aagataaaagagttaaaagttagagatttgcaaattttatc----tgtttgcaacagagcaag-ttacttgttttttgttgtagaaaagtaaacaattgt 11382646  T
Q  218 taagattctt 227  Q
    || |||||||    
T  11382645 tatgattctt 11382636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 17675717 - 17675491
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtc-caaataattcgcgttacttatttt--taagttgac 116  Q
    |||||||||| ||||||||||| || ||| |||| |||||||| |||  ||||||||||| |||  ||| || || |||||||||||||  |||||||||    
T  17675717 aatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgtttcgtcaaaaaaaactcacgttacttatttttgtaagttgac 17675618  T
Q  117 gatataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||| ||| || ||| |||||||||| | |||||||||||||||    || |||||||||||||||||||| || ||||||||||| |||| |||||| ||    
T  17675617 gatgtaa-aagataaaagggttagaaaggttgcaatttttatc----tgtttgcaacagagcaagtttacctg-ttttggttgcagaaaaataaacagcg 17675524  T
Q  216 gttaagattctttgaattccctctatttatatt 248  Q
    ||||  ||| || |||||||| || ||||||||    
T  17675523 gttagaatttttcgaattccccctgtttatatt 17675491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 17635862 - 17635637
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| ||||||||||| || ||| |||| |||||||| |||  ||||||||||| ||| ||| || || |||||||||||||  ||||||||||    
T  17635862 aatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaactcacgttacttatttttgtaagttgacg 17635763  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    || ||| || ||| |||||||||| | |||||||||||||||    || |||||||||||||||||||| || ||||||||||| | || |||||| | |    
T  17635762 atgtaa-aagataaaagggttagaaaggttgcaatttttatc----tgtttgcaacagagcaagtttacctg-ttttggttgcagataaataaacagcag 17635669  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    |||  ||| || |||||||| || ||||||||    
T  17635668 ttagaatttttcgaattccccctgtttatatt 17635637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 20174722 - 20174575
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||||| || |||  ||||||||||| ||||||| |||||  |||||||| ||||||||||| |||    
T  20174722 aatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttactta-ttttaagttgatgat 20174624  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttatctttttgc 165  Q
    ||  |||||||||  ||||||||||||| ||| ||||||||||| |||||    
T  20174623 ataaaataaaatagttaagggttagaga-ttggaatttttatctgtttgc 20174575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 45621968 - 45621880
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| |||||||||||||| ||| |||||||| ||||||||| ||||||||||| ||||||| |||||| |||||||||||||    
T  45621968 aatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttattttt 45621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 245
Target Start/End: Original strand, 32085479 - 32085695
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat-- 121  Q
    |||||| |||||||||||||||||| ||||||||||||| |||  ||||||||||| ||| ||| |  ||| |||||||| |||||||||||||||||      
T  32085479 gtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagctcgtgttactta-ttttaagttgacgatataa 32085577  T
Q  122 aataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    ||||||| |  |||| |||||||| ||||||||||||||    || |||||||||||||||||  || |  |||||||||| |||||||| || ||||||    
T  32085578 aataaaagagttaagagttagaga-ttgcaatttttatc----tgtttgcaacagagcaagttacctgg--tttggttgcagaaaagtaagcagcggtta 32085670  T
Q  220 agattctttgaattccctctatttat 245  Q
     || ||||| || |||| ||||||||    
T  32085671 ggactcttt-aaatccccctatttat 32085695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 13776351 - 13776545
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    ||||||||| ||| |||||||||||||||  ||||||| |||| |||  ||||||| ||| ||||||| ||  | ||||||||| |||||||||||||||    
T  13776351 aatcgtttattaaataataaagtgataag-tgagtatcgtatccacatagattgtcatttcgtccaaacaacccacgttactta-ttttaagttgacgat 13776448  T
Q  120 ataataaa-atataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    | |||||| | ||||||||| ||||| ||||||||||||||    || ||||||||||| ||| |||| ||||||| ||| || |||||| |||||||||    
T  13776449 aaaataaagagataagggttaagagatttgcaatttttatc----tgtttgcaacagagtaagattacctgttttttgttccagaaaagt-aacaacggt 13776543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 25196021 - 25196127
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt---ttaagttga 115  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |||  | ||||| ||| ||||||| ||||| ||||||||||||   |||||||||    
T  25196021 caatcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttatttttattaagttga 25196120  T
Q  116 cgatata 122  Q
    |||||||    
T  25196121 cgatata 25196127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 29027508 - 29027655
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| || |||||||||||| ||||||||||  |||  |||   ||||| ||||||| ||||||||| |||||||||| |||||||||| ||||    
T  29027508 aatcgtttaccaaataataaagtgatgagcagagtattgtattcacatgaattgttgttttgtgcaaataatttgcgttactta-ttttaagttgccgat 29027606  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgc 165  Q
    ||  ||||||  | |||||||||||||| ||||||||||||||| |||||    
T  29027607 attaaataaaagagataagggttagaga-ttgcaatttttatctgtttgc 29027655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 25887877 - 25887766
Alignment:
Q  132 aagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaa 231  Q
    |||||||||||| ||||||||||||||    || ||||||||||||||| |||| | |||||||||||| |||||||| || || ||| |||||||  ||    
T  25887877 aagggttagagatttgcaatttttatc----tgtttgcaacagagcaag-ttacctatttttggttgcagaaaagtaaccagcgattatgattcttcaaa 25887783  T
Q  232 ttccctctatttatatt 248  Q
    | ||| |||||||||||    
T  25887782 tcccccctatttatatt 25887766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 28925539 - 28925747
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgacgatata 122  Q
    |||| |||||||||||||||||| ||||  |  |||| ||   ||||||||||| ||||||| |||||  |||| |||||||  |||| |||||||||||    
T  28925539 ttaccaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaattcatgttatttatttttgtaagtttgacgatata 28925638  T
Q  123 ataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaag 221  Q
    | || ||| |||||||||| || ||||||||||||    |||| |||||||| ||||||||||| || ||||||||||| |||||||| ||  ||||| |    
T  28925639 a-aagata-aagggttagaaagcttgcaattttta----tttgtttgcaacatagcaagtttacctg-ttttggttgcagaaaagtaagcagaggttagg 28925731  T
Q  222 attctttgaattccct 237  Q
    |||||| |||| ||||    
T  28925732 attcttcgaatcccct 28925747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 29143086 - 29143177
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||||||||| |||||    |||||||||||||||| | |||| ||||| | ||||||||||| |||||||||||||| |||| ||||||    
T  29143086 agttgcaatttttatctgtttgc----aacagagcaagtttacctatttt-ggttgtagaaaagtaaacagcggttaagattcttcgaatcccctct 29143177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 30411804 - 30411880
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagatt 224  Q
    |||||||||||||||| |||||    |||||||||||||||| |||||||||||||| |||||||| || |||||| ||||    
T  30411804 gttgcaatttttatctgtttgc----aacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 30411880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 12953288 - 12953227
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctt 227  Q
    |||||||| ||||||||||| |||||||||||||| |||||||| ||||| ||| |||||||    
T  12953288 ttgcaacatagcaagtttacatgtttttggttgcagaaaagtaagcaacgattacgattctt 12953227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 30411690 - 30411778
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||| ||||| | |||||||||||||||| |||||||| |||| |||  ||||||| ||| |||| || |||| |||||||||||||||    
T  30411690 aatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttattttt 30411778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 25885546 - 25885460
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||| |||||||| | |||||| |||| ||||  |||||||||| ||||||| |||| | ||||||||||||    
T  25885546 aatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttatttt 25885460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 25888303 - 25888216
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgac 116  Q
    |||||| |||||||||||||||||| | |||||| |||| |||  |||||||||||    |||| ||||||||||||||| ||||||||||||    
T  25888303 gtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgttt----caaacaattcgcgttactta-ttttaagttgac 25888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 26603321 - 26603223
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctattt 243  Q
    |||||||||||||||| |||||    ||||||||| |||||| |||||||||||| | |||||||| || |||||| ||||||| ||| |||| ||||||    
T  26603321 gttgcaatttttatctgtttgc----aacagagca-gtttacctgtttttggttgtagaaaagtaagcagcggttaggattcttcgaa-tccccctattt 26603228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 12953370 - 12953288
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagtt 113  Q
    |||||||||||| ||||| |||||||  | || |||  ||||||||||| ||| ||| |||||||||||||||||||| ||||    
T  12953370 aagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttacttattttttagtt 12953288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 45553142 - 45553228
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||  |||||||||||||||||| | | |||| ||| ||||  ||||||||||||||||||  |||||| |||| ||||||    
T  45553142 aatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaattcgtgttaattattt 45553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 25535297 - 25535374
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| |||| || |||||  |||||||||||||    
T  25535297 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttattttt 25535374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 9774414 - 9774333
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    |||| ||| |||||||||||  | |||||||| |||| |||  ||||||||||||||||||  |||| ||||||||||||||||    
T  9774414 ttaccaaggaataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttattttta 9774333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 27418389 - 27418465
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||||||||||| ||||||||||||| |||  |||| || |||   ||||| |||||| ||||||||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttatttt 27418465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 17198034 - 17198084
Alignment:
Q  189 tttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||| |||||||| || |||||||||||||| |||| ||||||    
T  17198034 tttttggttgcagaaaagtaagcagcggttaagattcttcgaatcccctct 17198084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 26667464 - 26667522
Alignment:
Q  181 tttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||| |||||| ||||||| ||||||||||| |||||| ||||||| |||| ||||||    
T  26667464 tttacctgttttcggttgcagaaaagtaaacagcggttaggattcttcgaatcccctct 26667522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 23011844 - 23011764
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||| ||||||||||||| |||| ||| |||  |||| |||| ||||||||||||||| ||| |||| |||||| ||||||    
T  23011844 tttaccaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttttgtctaaacaatttgcgttatttattt 23011764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 24091002 - 24090925
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||  ||| |||| |||| |||  ||||||| ||| ||||||| |||||  |||||||||||||    
T  24091002 aagtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttattttt 24090925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 25196166 - 25196238
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||| ||||||||||| |||||| ||||||| |||||||| ||  ||||| ||||||| || ||||||||    
T  25196166 ttgcaacatagcaagtttacctgtttt-ggttgcaaaaaagtaagcagtggttaggattcttcgatttccctct 25196238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 25530470 - 25530547
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| ||||  | ||||| | ||||||||||||    
T  25530470 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgtaaaattctcattacttattttt 25530547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 25920389 - 25920479
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    ||||||||||||||||| |||||    |||||||| | ||||| |||||||||||||| |||||| | ||  | ||| |||||||||||| ||||    
T  25920389 agttgcaatttttatctgtttgc----aacagagcgattttacctgtttttggttgcagaaaagtgagcagtgattatgattctttgaatcccct 25920479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 17890093 - 17890167
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatt 242  Q
    ||||||||||||||||| || |||||| ||||||| ||| |||| ||||| |||||||||||| ||| ||| |||||    
T  17890093 ttgcaacagagcaagtt-acctgtttt-ggttgcagaaatgtaagcaacgattaagattctttcaatcccccctatt 17890167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 27737776 - 27737567
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||| ||||||||||| | |||| |||||| |||| ||||||| |||||||||||||||||||  ||||||||||    
T  27737776 aatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttacttatttttgtaagttgacg 27737677  T
Q  118 atataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    ||| ||| ||| |||||||||||||||||||||||||||||    || |||||||||||||||||||| ||||||| |||||| |||||||| || ||||    
T  27737676 ataaaatgaaagataagggttagagagttgcaatttttatc----tgtttgcaacagagcaagtttacctgttttt-gttgcaaaaaagtaagcagcggt 27737582  T
Q  218 taagattctttgaat 232  Q
    || ||||||| ||||    
T  27737581 taggattcttcgaat 27737567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 22410410 - 22410238
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||||| |||||||||| ||||||| |||||||| |||| |||  |||||||||||  | |||| ||||| |||||||||||||||||||||||||||||    
T  22410410 gtttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttttaagttgacgatataa 22410311  T
Q  124 taaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgca 200  Q
    ||||| ||||||||||||   ||||||||||||||    || |||||||||||||||||| | | ||||||||||||    
T  22410310 taaaagataagggttagaatcttgcaatttttatc----tgtttgcaacagagcaagttttcctatttttggttgca 22410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 23844552 - 23844351
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||| |  ||||||||||| ||||||| || ||||||||||||||||  ||||||||||    
T  23844552 aatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaagttgacg 23844453  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |||||| || ||| |||||||||| | |||||||||||||||    || |||||| ||| ||||||||| || |||||||||||||||||||| || |||    
T  23844452 atataa-aagataaaagggttagaaatgttgcaatttttatc----tgtttgcaatagaccaagtttacctg-ttttggttgcataaaagtaagcagcgg 23844359  T
Q  217 ttaagatt 224  Q
    ||| ||||    
T  23844358 ttaggatt 23844351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 23143734 - 23143874
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt-taagttgacga 118  Q
    |||| ||||| || ||||||||||||||| ||||||||||||| |||  ||||||||||| ||||||| |||||  |||||||||||| |||||||||||    
T  23143734 aatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaattcatgttacttattttgtaagttgacga 23143833  T
Q  119 tataataaaatataagggttagagagttgcaatttttatct 159  Q
    |||||||||| |||| |||||||||||| ||||||||||||    
T  23143834 tataataaaagataaaggttagagagtttcaatttttatct 23143874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 248
Target Start/End: Complemental strand, 14079483 - 14079320
Alignment:
Q  81 gtccaaataattcgcgttacttatttttaagttgacgatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaag 180  Q
    ||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    || |||||||| || |||    
T  14079483 gtccaaaaaatccgcgttacttatttttaagttgacgatatgctaaaatataagggctagagagttgcaatttttatc----tgtttgcaacaaaggaag 14079388  T
Q  181 tttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    ||| | | ||||||||| || |||||||| || ||||||  |||||| |||||||| |||||||||||    
T  14079387 ttttcctatttttggttacagaaaagtaagcagcggttagaattcttcgaattccccctatttatatt 14079320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 17827177 - 17826969
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat 121  Q
    ||||||| ||||||||||||| ||||  |||||||| |||| |||  |||||||||||  |||||| ||||||||||||||||||||   ||||| ||      
T  17827177 tcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattttttttttgacaat-- 17827080  T
Q  122 aataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
     |||||| ||||||||| | ||||||||||||||||    | || |||||||| ||| |||||||||||||||||||||| |||||||| |||||||||     
T  17827079 -ataaaagataagggttaaaagagttgcaattttta----tatgtttgcaacatagc-agtttacttgtttttggttgcagaaaagtaagcaacggttag 17826986  T
Q  221 gattctttgaattccct 237  Q
     ||||||||||||||||    
T  17826985 aattctttgaattccct 17826969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 232
Target Start/End: Complemental strand, 28933733 - 28933539
Alignment:
Q  34 taataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aataaa--at 129  Q
    ||||||||||||||| |||||||| |||| |||| |||| |||||| ||||||| |||| | ||| |||| ||||||||||| |||||  ||||||  |     
T  28933733 taataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgctta-ttttaagttgatgatataaaataaaagag 28933635  T
Q  130 ataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttg 229  Q
    |||||||||||||| ||||||||||||||    || ||||||||||||||| ||||||||| ||||||||| ||||| ||||| |||||| || ||||||    
T  28933634 ataagggttagaga-ttgcaatttttatc----tgtttgcaacagagcaag-ttacttgttcttggttgca-aaaaggaaacagcggttaggactctttg 28933542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 9516797 - 9516919
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||  ||||||||||| ||||||| || ||||||||||||||||  ||||||||||    
T  9516797 aatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaagttgacg 9516896  T
Q  118 atataataaaatataagggttaga 141  Q
    |||||| || ||| ||||||||||    
T  9516897 atataa-aagataaaagggttaga 9516919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 27124579 - 27124368
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt-aagttgacga 118  Q
    |||||||||| |||||||||||||||||  | | |||| |||| |||  ||||||||||| |  |||| ||||| |||||||||||||| || |||||||    
T  27124579 aatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttatttttgaacttgacga 27124480  T
Q  119 tataataaaatataagggttaga-gagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    |||||   || |||||||||| | || || |||||||||| | |||||    |||||||||||||||| ||| || ||||||| |||||||| || ||||    
T  27124479 tataa---aacataagggttaaaagacttccaatttttatatgtttgc----aacagagcaagtttacctgtctt-ggttgcagaaaagtaagcagcggt 27124388  T
Q  218 taagattctttgaattccct 237  Q
    ||||||||||||||| ||||    
T  27124387 taagattctttgaatcccct 27124368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 21907444 - 21907660
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| | |||||| |||| |||| ||||||||||| ||||||| || ||||||||||||  |||||||||| |||    
T  21907444 aatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaaaaagtcgcgttactta-atttaagttgatgat 21907542  T
Q  120 at--aataaa--atataagggttagagagttgc--aatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaa 213  Q
    ||  ||||||  | |||||||||||| | || |  ||||||||||    || ||||||||||||||| |||  | |||||||||||| ||||| |||||     
T  21907543 ataaaataaaagagataagggttaga-aattacataatttttatc----tgtttgcaacagagcaag-ttagctatttttggttgcaaaaaaggaaacag 21907636  T
Q  214 cggttaagattctttgaattccct 237  Q
    |||||| || ||||||||| ||||    
T  21907637 cggttacgactctttgaatcccct 21907660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 257
Target Start/End: Complemental strand, 12183418 - 12183185
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| | |||||| |||| |||  ||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||    
T  12183418 aatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaattcacgttactta-ttttaaggtgacgat 12183320  T
Q  120 at--aataaaa---tataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    ||  |||||||   | ||| ||||||||| ||||||| ||||||    || |||||||| |||||| |||| || |||||||| || |||||||| ||||    
T  12183319 ataaaataaaagagtttaaaggttagaga-ttgcaatgtttatc----tgtttgcaacatagcaag-ttacctg-ttttggttacagaaaagtaagcaac 12183227  T
Q  215 ggttaagattctttgaattccctctatttatattcttcgacat 257  Q
    ||||| ||||||| ||| |||| ||||||||||| || |||||    
T  12183226 ggttaggattcttcgaa-tccccctatttatattgttggacat 12183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 21679938 - 21679790
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||  |||| || ||| ||||||| |||||| ||||||| ||||| ||||||||||    
T  21679938 aatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttactt-ttttttagttgacgat 21679840  T
Q  120 ataataa----aatataagggttagagagttgcaatttttatctttttgc 165  Q
    | |||||    | |  |||| ||||||| ||||||||||||||| |||||    
T  21679839 aaaataataagagttaaaggattagagatttgcaatttttatctatttgc 21679790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 9726034 - 9726120
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  ||||||||||| ||||||| |||| |||||||||||||    
T  9726034 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 11176961 - 11177183
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacga 118  Q
    |||||||||||  |||| |||||||||||| |||||||| |||| |||  | |||||||||  || |||||||||| |||||||| |||||| |||||||    
T  11176961 caatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataattcgtgttactta-ttttaaattgacga 11177059  T
Q  119 tat--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    |||  ||||||  | |||||||||||| | ||||||||||||    |  | |||||||| |||||| |||| ||||||| ||| |||||||| ||||| |    
T  11177060 tataaaataaaagagataagggttaga-aattgcaattttta----taagtttgcaacatagcaag-ttacctgttttttgttacataaaaggaaacagc 11177153  T
Q  215 ggttaagattctttgaattccctctattta 244  Q
    ||||| || ||||| ||| |||||||||||    
T  11177154 ggttaggactctttaaatcccctctattta 11177183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 17729164 - 17729244
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttac 100  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||| ||||||||||| |||||||  |||||||||||    
T  17729164 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgttac 17729244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 21672522 - 21672374
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||| || ||| ||||||| |||||| ||||||| ||||| ||||||||||    
T  21672522 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttactt-ttttttagttgacgat 21672424  T
Q  120 ataataa----aatataagggttagagagttgcaatttttatctttttgc 165  Q
    | |||||    | |  |||| ||||||| ||||||||||||||| |||||    
T  21672423 aaaataataagagttaaaggattagagatttgcaatttttatctatttgc 21672374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 23645854 - 23645633
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| | |  ||||||||||| ||||||| ||||  ||||| |||||||| |    || ||    
T  23645854 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttga----acaat 23645759  T
Q  120 ataataaaata-------taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaaca 212  Q
    | |||||||||       | ||||||||||| ||||||||||||    |||| ||||||||||||||| |||| || |||||||||||||||||||| ||    
T  23645758 aaaataaaataaaagagttgagggttagaga-ttgcaattttta----tttgtttgcaacagagcaag-ttacatg-ttttggttgcataaaagtaagca 23645666  T
Q  213 acggttaagattctttgaattccctctatttat 245  Q
      ||||| | |||||||||| | ||||||||||    
T  23645665 gtggttaggcttctttgaatccgctctatttat 23645633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 4339761 - 4339834
Alignment:
Q  34 taataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||||||||||  ||||||| |||||||||||    
T  4339761 taataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcattacttatttt 4339834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 23232067 - 23231982
Alignment:
Q  23 cgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    ||||||| |||||||||||||||||| || |||||||||| | ||  ||||||| || ||||||| ||||||||||||||||||||    
T  23232067 cgtttaccaagtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttattttt 23231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 5624652 - 5624861
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaat---gattgtcgttttgtccaaataattcgcgttacttatttt--taag-tt 113  Q
    |||||||||| |||||||||||||||||| |||||||| ||  ||||||   |||||||||||||| |||| |||| ||||||||||||||  |||| ||    
T  5624652 aatcgtttaccaagtaataaagtgataagtagagtatctta--tacaatagagattgtcgttttgtgcaaacaatttgcgttacttatttttgtaagttt 5624749  T
Q  114 gacgatataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaaca 212  Q
    ||||||   | ||||  ||||||||||| | |||||||||||||||    || ||| || ||||| |||||||  | ||||||||||| |||||||| ||    
T  5624750 gacgat---agaaaagttaagggttagaaaggttgcaatttttatc----tgtttgtaatagagc-agtttaccggcttttggttgcagaaaagtaagca 5624841  T
Q  213 acggttaagattctttgaat 232  Q
     |||||| ||||||| ||||    
T  5624842 gcggttaggattcttcgaat 5624861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 20005966 - 20005899
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaa 87  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||  |||| |||||| |||||||    
T  20005966 aatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaaa 20005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 248
Target Start/End: Complemental strand, 6630705 - 6630554
Alignment:
Q  94 gcgttacttatttttaagttgacgatataa--taaaa--tataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgt 189  Q
    |||||||||||||| |||||||| ||||||  |||||  ||||| ||||||||| ||||||||||||| |||||   |||||||||||||||| || |||    
T  6630705 gcgttacttatttt-aagttgacaatataaaataaaagatataaaggttagaga-ttgcaatttttattttttt---tgcaacagagcaagtt-acctgt 6630612  T
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    ||||||||||| ||| | ||| | |||||| || ||||||||| ||| |||||||||||    
T  6630611 ttttggttgcaaaaatggaaatagcggttaggactctttgaataccc-ctatttatatt 6630554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 18075471 - 18075367
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcg-ttacttatttttaagttgacgatata 122  Q
    |||||| ||||||||||||||||||||||||||| |||| ||   ||||||||||||||||||| |||  | | |||||||||||| ||||||| ||| |    
T  18075471 gtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaatctgagtttacttattttt-agttgacaataaa 18075373  T
Q  123 ataaaa 128  Q
    ||||||    
T  18075372 ataaaa 18075367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 22566244 - 22566163
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||  ||||||| || ||| ||  ||||||||||||||||||    
T  22566244 tttaccaagtaataaagtgataagtagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttacttattt 22566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 20005894 - 20005789
Alignment:
Q  131 taagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttg 229  Q
    ||||||||||| || |||||||||||||    ||| |||||||||||| ||||||| |||||||||||||| ||| |||  || |||||||||||||| |    
T  20005894 taagggttagaaagcttgcaatttttat----ttgtttgcaacagagcgagtttacctgtttttggttgcagaaaggtatgcagcggttaagattcttcg 20005799  T
Q  230 aattccctct 239  Q
    ||| ||||||    
T  20005798 aatcccctct 20005789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 21688883 - 21688795
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    ||||||||||||||||||| |||||||||| |||||||  |||| | |  ||||||||||   |||||| |||||||||||||||||||    
T  21688883 caatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttacttatttt 21688795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 17299918 - 17299832
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| |||||||| |||  |    ||||||||||| ||||||| |||| |||||||||||||    
T  17299918 aatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 20002423 - 20002338
Alignment:
Q  74 tcgttttgtccaaataattcgcgttacttatttttaagttgacgatataat-aaaatataagggtt-agagagttgcaatttttat 157  Q
    |||||||||||||||||| ||||||||||||||| |  ||||||||| ||| |||| ||||||||| ||||| ||||||| |||||    
T  20002423 tcgttttgtccaaataatccgcgttacttattttaagtttgacgataaaataaaaagataagggttaagagatttgcaatatttat 20002338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 24251530 - 24251611
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactta 103  Q
    |||||||| |||||||||||| |||||||||| |||  ||| |||  | ||||||| ||||||||| |||||||||||||||    
T  24251530 tcgtttaccaagtaataaagtcataagcagaggatcgcatccacagggtttgtcgtcttgtccaaacaattcgcgttactta 24251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 8241289 - 8241434
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||| ||||||||||| |||||||| |||| |||| | ||| ||||||||||||| ||||| | ||||||||||| |  || |||||    
T  8241289 aatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaattcacattacttatttt-agtttcacgat 8241385  T
Q  120 ataa--taaaata--taagggttagagagttgcaatttttatctttttgc 165  Q
    ||||  ||||| |  |||| |||||||| ||||||||||||||| |||||    
T  8241386 ataaaataaaagagttaagagttagaga-ttgcaatttttatctgtttgc 8241434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 14637026 - 14637104
Alignment:
Q  169 caacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    ||||||||||||||||| |||||||||||||| |||||||| || ||  || ||||||| ||| |||| |||||||||||    
T  14637026 caacagagcaagtttacctgtttttggttgcagaaaagtaagcagcgaataggattcttcgaa-tccccctatttatatt 14637104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 19244598 - 19244664
Alignment:
Q  21 atcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaa 87  Q
    ||||||||| |||||||||||||||||| ||||||||  ||||| |  ||||||||||| |||||||    
T  19244598 atcgtttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaa 19244664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 25927387 - 25927305
Alignment:
Q  23 cgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatt 105  Q
    ||||||| |||||||||||||||||| ||| |||| |||| |||  |||| | |||| ||||||| ||||| |||||||||||    
T  25927387 cgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaattcacgttacttatt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 9838380 - 9838455
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    ||||||||||||||||| |||||||  |||| |||  ||||||| ||||||  ||| || ||||||||||||||||    
T  9838380 agtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttatttt 9838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 18075331 - 18075288
Alignment:
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaatt 233  Q
    ||||||||||| |||||||| || ||||||||||||||||||||    
T  18075331 ttttggttgcagaaaagtaagcagcggttaagattctttgaatt 18075288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 25781915 - 25782014
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctattt 243  Q
    |||||||||||||||| |||||    |||||||||||||||| | |||| ||||||| |||||||||||   |||| ||||||| |||| |||||| | |    
T  25781915 gttgcaatttttatctgtttgc----aacagagcaagtttacctatttt-ggttgcagaaaagtaaacagtagttaggattcttcgaatcccctctgtat 25782009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 28586117 - 28586058
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    ||||||||||  ||||||||| ||||||| ||||||||||||| |||  |||||||||||    
T  28586117 aatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgttt 28586058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 22413125 - 22413048
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||| ||||| |||||||| ||||||||  ||||||  ||| |||| || |||||  |||||||||||||    
T  22413125 aagtaataaagttataagtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttattttt 22413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 17382157 - 17382217
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgtttt 80  Q
    |||||||||| ||  ||||||||||| || |||||||| ||||||||  ||||||||||||    
T  17382157 aatcgtttaccaatgaataaagtgatgagtagagtatcgtatctacagggattgtcgtttt 17382217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 17382224 - 17382275
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    |||||||||||||||||||| || ||||||||||| |||||||| || |||||    
T  17382224 ttgcaacagagcaagtttacatg-ttttggttgcagaaaagtaagcagcggtt 17382275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 13315074 - 13314865
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt-taagttgacgatataa 123  Q
    ||||| |||||||||||||||||| | |||||| |||| |||  |||| | |||| ||||||| ||||||||||||||||||| ||||||||||||||||    
T  13315074 tttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttattttataagttgacgatataa 13314975  T
Q  124 taaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagat 223  Q
    ||||| ||||  |||||||||||||||||||||    | || ||||||| || ||| ||||| |||||||||||||| |||||||| |||||||||||||    
T  13314974 taaaagataaacgttagagagttgcaattttta----tatgtttgcaactgaacaaatttacctgtttttggttgcagaaaagtaagcaacggttaagat 13314879  T
Q  224 tctttgaattccct 237  Q
    |||| |||| ||||    
T  13314878 tcttcgaatcccct 13314865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 18448629 - 18448423
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agttgacg 117  Q
    |||| ||||| |||||||||||| ||||  |||| ||| |||| | |  ||||||||||||||||||| ||||| |||||||||||||||  ||||||||    
T  18448629 aatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttatttttataagttgacg 18448530  T
Q  118 atataataaaatataagggttagagagt--tgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    |||||| || ||| || ||||||| |||  |||| ||||||||| |||||    ||||||||||||| || ||||||||||||||||||||||| |||||    
T  18448529 atataa-aagata-aatggttagaaagtcttgcagtttttatctgtttgc----aacagagcaagtt-acctgtttttggttgcataaaagtaagcaacg 18448437  T
Q  216 gttaagattctttg 229  Q
    |||| |||||||||    
T  18448436 gttatgattctttg 18448423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 248
Target Start/End: Complemental strand, 24114365 - 24114146
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgatat 121  Q
    |||||| |||||||||| ||||||| |||||||| ||||  ||  ||||||||||| ||||||| || | ||||||||||||||  ||||||||||||      
T  24114365 gtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgttacttatttttgtaagttgacgat-- 24114268  T
Q  122 aataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
     |||||| |||||||||| | | |||||||||||||||    || ||||| |||||||||||||| || |||||||  |  |||||||| || ||||||     
T  24114267 -ataaaagataagggttataaaggttgcaatttttatc----tgtttgcagcagagcaagtttacctg-ttttggtatctgaaaagtaagcagcggttag 24114174  T
Q  221 gattctttgaattccctctatttatatt 248  Q
    ||||||| |||| ||| |||||||||||    
T  24114173 gattcttcgaatcccccctatttatatt 24114146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 29382448 - 29382244
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||||||||||  |||||| |||| ||||||||||||||  |||| |||||    
T  29382448 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttacttatttttgtaagtttgac 29382349  T
Q  117 gatataataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    |||   ||||||  ||| ||||||| || ||||||||||||||    || |||||||| ||||||| ||| | |||||||||||| |||||||| ||  |    
T  29382348 gat---ataaaagttaatggttagaaagcttgcaatttttatc----tgtttgcaacatagcaagtgtacctatttttggttgcagaaaagtaagcagtg 29382256  T
Q  216 gttaagattctt 227  Q
    |||| |||||||    
T  29382255 gttaggattctt 29382244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 14626118 - 14626179
Alignment:
Q  96 gttacttatttttaagttgacgatataataaaatataagggttagagagttgcaatttttat 157  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  14626118 gttacttattttttagttgaagatataataaaatataagggttagagagttgcaatttttat 14626179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 14528161 - 14528308
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||| | |||||||| |||| |||  ||||||||||| ||||||| || || ||||||||| ||||||  |||||||    
T  14528161 aatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgttactta-ttttaaactgacgat 14528259  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttatctttttgc 165  Q
    ||  |||||||||  ||||||||||||| |||||||||||| || |||||    
T  14528260 ataaaataaaatagttaagggttagaga-ttgcaatttttagctgtttgc 14528308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 27659468 - 27659562
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgatataa 123  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||| | | || ||||||||||||  ||||||||||||||||    
T  27659468 aagtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttgtaagttgacgatataa 27659562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 6884982 - 6885115
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaa-ata 130  Q
    |||||||||||||||||  ||||||| ||||||||  ||||||||||| ||||||| || | ||| |||||||||| |  ||||||||| |||||| | |    
T  6884982 agtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaaacaacttgcgctacttattttaagtttgacgataaaataaagaga 6885080  T
Q  131 taaggg-ttagagagttgcaatttttatctttttg 164  Q
    |||||| ||||||| ||||||||||||||| ||||    
T  6885081 taagggtttagagatttgcaatttttatctgtttg 6885115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 17509257 - 17509442
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgac 116  Q
    |||||||| || |||||||||||||||||| ||||||||||||| |||  ||||||  ||| ||||||| ||||| | |||||||||||  |||||||||    
T  17509257 caatcgttaaccaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttatttttataagttgac 17509356  T
Q  117 gatataataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    | ||||  ||||| |||||||| | ||| |||||||||| | |    || |||||| ||||||||||||| ||||||| |||||| ||||||||    
T  17509357 ggtata--aaaat-taagggttaaaagacttgcaattttcacc----tgtttgcaatagagcaagtttacctgttttt-gttgcaaaaaagtaa 17509442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 236
Target Start/End: Original strand, 19786743 - 19786956
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||| ||| | ||||||||||| | |  || |||||||| ||||||| || ||| |||||||  ||||||||||| |||    
T  19786743 aatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaactcgtgttactt-gttttaagttgatgat 19786841  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | ||||  |||||||| ||| ||||||||||    || ||||||||||||||| |||| |||||||| ||| | ||||| |||||| |    
T  19786842 ataaaataaaagagataaaagttagaga-ttgtaatttttatc----tgtttgcaacagagcaag-ttacatgtttttgattgtagaaaaggaaacaatg 19786935  T
Q  216 gttaagattctttgaattccc 236  Q
    |||| || |||||||||||||    
T  19786936 gttaggactctttgaattccc 19786956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 34497127 - 34497275
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||||| || |||||||| |||| | |  || |||||||| ||||||| ||| | ||||||||| |||||| ||||||||    
T  34497127 aatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttactta-ttttaaattgacgat 34497225  T
Q  120 at--aataaaa---tataagggttagagagttgcaatttttatctttttgc 165  Q
    ||  |||||||   |  |||||||||||| |||||||||||||||||||||    
T  34497226 ataaaataaaagagttaaagggttagaga-ttgcaatttttatctttttgc 34497275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 232
Target Start/End: Complemental strand, 25182510 - 25182306
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa- 123  Q
    ||||| || ||||||||||| ||| |||||||| |||  |||  ||||||| ||| ||| |||    | |||||||||||||| |||||||||||||||     
T  25182510 tttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgcttgcgttacttatttt-aagttgacgatataaa 25182412  T
Q  124 -taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
     ||||| |  ||||||||||||| ||||||||||||||| |||||    ||||||||||||| || |||||||||||||| ||||| |||||  |||||     
T  25182411 ataaaagagataagggttagaga-ttgcaatttttatctatttgc----aacagagcaagtt-acctgtttttggttgcagaaaaggaaacagtggttag 25182318  T
Q  221 gattctttgaat 232  Q
    || |||||||||    
T  25182317 gactctttgaat 25182306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 24904645 - 24904731
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||| ||||| || ||||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| ||||| | ||||||||||    
T  24904645 aatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttattt 24904731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 30806584 - 30806438
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcata-----tctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttg 114  Q
    ||||||||| ||||||||||||||||||| |||||||| ||     || |||| |||||||||||  |||||| |||| |||||||||| |||||  |||    
T  30806584 aatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaacaatttgcgttactta-ttttagtttg 30806486  T
Q  115 acgatat--aataaaata--taagggttagagagttgcaatttttatct 159  Q
    |||||||  ||||||| |  ||||||||||||| |||||||||||||||    
T  30806485 acgatataaaataaaagagttaagggttagaga-ttgcaatttttatct 30806438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 248
Target Start/End: Original strand, 24269615 - 24269833
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagtt-gacgatat 121  Q
    ||||| ||||||||||||| |||| |||||||| |||| |||  ||||||||||| ||||||| ||||| | ||| ||||||||  ||||| |||| |||    
T  24269615 tttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatttatttttgtaagtttgacggtat 24269713  T
Q  122 aataaaatataagggttagag-agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
    || |||   |||| ||| ||  ||||||||| ||||||| |||||    ||||||| | |||||| |||||||||||||| |||||||| || ||||||     
T  24269714 aaaaaa---taagagtttgaatagttgcaatctttatctgtttgc----aacagagta-gtttacctgtttttggttgcagaaaagtaagcagcggttag 24269805  T
Q  221 gattctttgaattccctctatttatatt 248  Q
    ||||||| |||| ||| || ||||||||    
T  24269806 gattcttcgaatcccccctgtttatatt 24269833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 30122230 - 30122156
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||||||| |||| ||||||||||||| |||  ||||||| ||||||||||| ||||||| ||||||||||    
T  30122230 aagtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcattacttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 5850953 - 5851039
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||||||||||   ||||| ||| || |||||||||||    
T  5850953 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatccgtgttacttattt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 21314641 - 21314865
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| |||||||||||||||||| || ||||| ||||||||  |||| |||||| || |||| ||| | |||||||||||||| ||||  | ||||||||    
T  21314641 ttaccaagtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttattttt-agttaccaatataata 21314739  T
Q  126 aaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagat 223  Q
     || |  ||| |||||||   ||||||| ||||||    ||||| ||| ||||||||||| | ||||||| ||| |||||||||||  | |||||| ||     
T  21314740 gaagagttaaaggttagaagtttgcaatatttatc----tgcttacaatagagcaagtttgcctgtttttagttacataaaagtaagtagcggttaggag 21314835  T
Q  224 tctttgaattccctctatttatattcttcga 254  Q
    | || ||| |||| ||||| |||||||||||    
T  21314836 tattcgaa-tccccctattgatattcttcga 21314865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 26394642 - 26394562
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    |||||||| ||||||||||| |||||| ||||||| |||||||| ||||||||| ||||||| ||| |||| |||||||||||    
T  26394642 ttgcaacaaagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattcttcgaa-tccccctatttatatt 26394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 2637621 - 2637697
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||||||| ||| ||| || || |||||||||||||    
T  2637621 aagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 165
Target Start/End: Original strand, 13697897 - 13698014
Alignment:
Q  50 agagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatata----ataaaatataagggttagagagt 145  Q
    |||||||| |||| |||| |||| |||||| ||||||| ||   |||||||||| ||||||||||||||||||    | || | |||||||||||||| |    
T  13697897 agagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttactta-ttttaagttgacgatataaaatacaagagataagggttagaga-t 13697994  T
Q  146 tgcaatttttatctttttgc 165  Q
    |||||||||||||| |||||    
T  13697995 tgcaatttttatctctttgc 13698014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 17101980 - 17101875
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttact--tatttttaagttgacg 117  Q
    |||||||||| |||||||||||||||||| |||||||| |||| | |  |||||||||||  |||||| |||  | ||||||  ||||| ||||||||||    
T  17101980 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaatatgtgttacttatatttgtaagttgacg 17101881  T
Q  118 atataa 123  Q
     |||||    
T  17101880 gtataa 17101875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 44011110 - 44011025
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||  ||||||||||| ||| |||| |||| |||||| |||||    
T  44011110 aatcgtttacgaagtaataaagtg-taagtagagtatcgtatccacatggattgtcgtttcgtcaaaatgattcacgttacatattt 44011025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 23893277 - 23893200
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    ||||||| |||||||||| ||||||||||||| |||  ||||||  |||||||| || |||||  |||||||||||||    
T  23893277 aagtaatgaagtgataagtagagtatcatatcaacatagattgttcttttgtccgaacaattcttgttacttattttt 23893200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 24644855 - 24644935
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||| ||||||||||||| |||| |||||||  |||| |||  |||| ||||||| |||||||||||||| ||||||||||    
T  24644855 tttaccaagtaataaagtg-taagtagagtattgtatccacatggattatcgttttttccaaataattcgcattacttattt 24644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 26394693 - 26394661
Alignment:
Q  96 gttacttatttttaagttgacgatataataaaa 128  Q
    |||||||||||||||||||||||||||||||||    
T  26394693 gttacttatttttaagttgacgatataataaaa 26394661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 30783828 - 30783772
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcg 76  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  ||||||||    
T  30783828 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 17101849 - 17101806
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||    
T  17101849 ttgcaacagagcaagtttacctgtttttgattgcaaaaaagtaa 17101806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 17976642 - 17976717
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||||||||||| |||||||| |||| |||| |||| |||||| ||| | | | ||||| ||||||||||    
T  17976642 aagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtctacacatttcgcattacttattt 17976717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 24110742 - 24110675
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaa 87  Q
    |||| ||||| |||||||||| ||||||| |||||||| |||| |||| |||| || |||||||||||    
T  24110742 aatcatttaccaagtaataaaatgataagtagagtatcgtatccacaacgattttcattttgtccaaa 24110675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 18569210 - 18569275
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||||||| ||| |||||||||||||| ||||||| |||||||| || |||||| |||| |||||||    
T  18569210 ttgcaacatagcgagtttacttgtttt-ggttgcagaaaagtaagcagcggttacgattttttgaat 18569275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 15238815 - 15238896
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatt 105  Q
    |||||| |||||| ||| ||||||| ||| |||| |||| |||   |||||||||| ||| ||| |||||||||||||||||    
T  15238815 gtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 25226148 - 25226237
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    |||||||||  ||||||||||||||||||  ||||||| ||| ||||  |||| | ||||  |||||| |||| ||||||| ||||||||    
T  25226148 aatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacatattttta 25226237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 21301930 - 21302140
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  ||||||| ||| ||||||| |||||| ||||||||||||  ||| ||||||    
T  21301930 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagttacttatttttgtaaattgacg 21302029  T
Q  118 atataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    ||||||||||| ||| ||||||||| |||| ||||||||||    || |||||||||||||||||||| | |||||| ||||| |||| |||||| ||||    
T  21302030 atataataaaagatatgggttagagtgttggaatttttatc----tgtttgcaacagagcaagtttacctttttttgattgcagaaaaataaacagcggt 21302125  T
Q  218 taagattctttgaat 232  Q
    || ||||||| ||||    
T  21302126 taggattcttcgaat 21302140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 254
Target Start/End: Complemental strand, 17438512 - 17438287
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgacgatata 122  Q
    |||| |||| ||||| ||||||| ||||||||||||| |||  ||||||||||| ||||||| ||||| |||||||||||||  |||| |||||||||||    
T  17438512 ttaccaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgacgatata 17438413  T
Q  123 ataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaag 221  Q
    || ||||| |||| ||||| || ||||||||||||||    || |||||||||||||| ||||| || ||||||||||| |||||||| ||||||||| |    
T  17438412 at-aaata-aaggtttagaaagcttgcaatttttatc----tgtttgcaacagagcaattttacctg-ttttggttgcagaaaagtaagcaacggttagg 17438320  T
Q  222 attctttgaattccctctatttatattcttcga 254  Q
    |||||| |||| ||||||||||||||| |||||    
T  17438319 attcttcgaatcccctctatttatattgttcga 17438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 16245814 - 16245593
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat 121  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||  |||| || ||| ||||||| ||||| ||||||||| |||||  ||||| |||     
T  16245814 tcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaattctcgttactta-ttttagtttgacaataa 16245716  T
Q  122 aataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    ||||||| |  ||||||||||||| ||||||||||||||| |    ||||||||||||||| |||| |||||||||||||| |||||||| || ||||||    
T  16245715 aataaaagagttaagggttagagatttgcaatttttatctat----ttgcaacagagcaag-ttacctgtttttggttgcagaaaagtaagcagcggtta 16245621  T
Q  220 agattctttgaattccctctatttatatt 248  Q
      |||||  ||| |||| |||||||||||    
T  16245620 gaattctccgaa-tccccctatttatatt 16245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 41508379 - 41508587
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  |||||||||||||||| | ||| |||| ||||| |   ||||||||||| ||||||| |||| || |||||||||||||| ||||||||    
T  41508379 aatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcattacttatttttaatttgacgat 41508478  T
Q  120 ataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    | ||||||| |  ||||||||||||| ||||||||| ||||    || |||||||| |||||| |||| || ||||||||||| |||||||| || ||||    
T  41508479 aaaataaaagagttaagggttagagatttgcaatttgtatc----tgtttgcaacaaagcaag-ttacatg-ttttggttgcagaaaagtaaccagcggt 41508572  T
Q  218 taagattctttgaat 232  Q
    |||||||||||||||    
T  41508573 taagattctttgaat 41508587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 7478388 - 7478288
Alignment:
Q  54 tatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaatataagggttagagagttgcaattt 153  Q
    |||| |||| ||| |||||||||||| ||||||| ||||| |||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  7478388 tatcgtatccacattgattgtcgtttggtccaaacaattcacgttacttattttttagttgatgatataataaaatataagggttagagggttgcaattt 7478289  T
Q  154 t 154  Q
    |    
T  7478288 t 7478288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 20429726 - 20429908
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaag-ttgacgatata 122  Q
    |||||| |||||||||| ||||||| |||||||| |||||| || ||||||| |||  |||| | ||||||||||||||||||||||| |||||||||||    
T  20429726 gtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaattcgcgttacttatttttaagtttgacgatata 20429825  T
Q  123 ataaaata-taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||| | |||||||||||   ||||||||||||    | || ||||||||||||||||||| |   ||||||||||| ||||||||    
T  20429826 ataaaagagtaagggttagaagtttgcaattttta----tatgtttgcaacagagcaagttta-tctattttggttgcagaaaagtaa 20429908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 209
Target Start/End: Complemental strand, 3116501 - 3116321
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||||| ||||||||||||||||||  ||||||  |||| |||  ||||||||||| ||||||| ||||| ||||||||| |||||||||||||||| ||    
T  3116501 gtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttactta-ttttaagttgacgataaaa 3116404  T
Q  124 taaa-atataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||| | ||||||||| ||||| ||||||||||||||    || |||||||||||||||  ||| || ||||||||||| ||||||||    
T  3116403 taaagagataagggttaagagatttgcaatttttatc----tgtttgcaacagagcaag-atacctggttttggttgcagaaaagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 21303441 - 21303220
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| || ||||||| ||||||| |||||||| || | |||| |||||| ||||  |||||| ||||  ||||||||||||| |||||||| ||    
T  21303441 aatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttacttatttt-aagttgactat 21303343  T
Q  120 ataa--taaaatat--aagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||  ||||| |   |||||||||||| ||||||||||||||| |||||    ||||||||||||| ||||||||| ||||||| |||||||| || ||    
T  21303342 ataaaataaaagagtaaagggttagaga-ttgcaatttttatctgtttgc----aacagagcaagtt-acttgtttt-ggttgcagaaaagtaagcagcg 21303250  T
Q  216 gttaagattctttgaattccctctatttat 245  Q
    |||| |||| ||||||| ||| ||||||||    
T  21303249 gttaggattatttgaatcccccctatttat 21303220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 932751 - 932970
Alignment:
Q  17 atcaatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-tt 113  Q
    |||||||||||||||||||||||| ||||||  |||||||| |||| |||  ||||||| ||| ||||||| ||||| | |||||||||||  |||| ||    
T  932751 atcaatcgtttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttatttttataagttt 932850  T
Q  114 gacgatataataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaaca 212  Q
    |||| ||||  ||| |  |||| || | ||| || |||||||||    |||| ||||||||||||||||||||||| ||||||||||| |||||||| ||    
T  932851 gacgttata--aaagttaaaggtttaaaagacttacaattttta----tttgtttgcaacagagcaagtttacttg-ttttggttgcagaaaagtaagca 932943  T
Q  213 acggttaagattctttgaattccctct 239  Q
     ||||||  |||||| |||||||||||    
T  932944 gcggttagtattcttcgaattccctct 932970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 12805977 - 12805830
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacg-- 117  Q
    |||| ||||| |||||||||||||||||| ||||||||||||| |||  |||||||||||  |||||| |||| |||||||||| |||||||| ||||      
T  12805977 aatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgttactta-ttttaagtcgacgtt 12805879  T
Q  118 atataataaaatat--aagggttagagagttgcaatttttatctttttgc 165  Q
    ||| ||||||| ||  |||||||||||| ||||||||||||||| |||||    
T  12805878 ataaaataaaagattaaagggttagaga-ttgcaatttttatctgtttgc 12805830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 4650242 - 4650451
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacga 118  Q
    ||||| ||||| ||||||||||||||| || | |||||| |||| |||  ||||||| ||| | ||||| |||||||||||||||   ||||||||||||    
T  4650242 caatcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttactta---ttaagttgacga 4650338  T
Q  119 tataataaaatataagggtt--agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |   | ||||  ||||||||  | ||| ||||||||||||||    || ||||||| |||||||||||| || ||||||||||| |||||||| ||||||    
T  4650339 t---acaaaagttaagggttaaaaagacttgcaatttttatc----tgtttgcaacggagcaagtttacctg-ttttggttgcagaaaagtaagcaacgg 4650430  T
Q  217 ttaagattctttgaattccct 237  Q
    ||| ||||||| |||| ||||    
T  4650431 ttaggattcttcgaatcccct 4650451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 19925699 - 19925505
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt---ttaagttgacgatataataaa 127  Q
    ||||||||| |||||| | |||||||| |||| |||  ||||||| ||| ||||||||||||||||||||||||||   ||||||| |||||   |||||    
T  19925699 aagtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttatttttattaagttaacgat---ataaa 19925603  T
Q  128 atataagggtt---agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagatt 224  Q
    || ||||||||   ||||| |||||||||     | | || |||||||||||||||||||| |||||| | ||||| |||||||| || |||||| ||||    
T  19925602 atttaagggttaaaagagacttgcaattt-----tatatgtttgcaacagagcaagtttacctgttttggtttgcagaaaagtaagcagcggttaggatt 19925508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 19171917 - 19171816
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgatat 121  Q
    |||||| ||||||||||||||||||||||| |||||||  |||| ||||||||||| ||||||| |||| || |||||||||||  || |||||||||||    
T  19171917 gtttaccaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcattacttatttttgtaggttgacgatat 19171818  T
Q  122 aa 123  Q
    ||    
T  19171817 aa 19171816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 209
Target Start/End: Original strand, 5508359 - 5508532
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaa-at 129  Q
    ||||||||||||||||||  |||||| ||||| |||  ||||||||||| ||||||| |  |||||||||||| ||||||| |||||||| |||||| |     
T  5508359 aagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatctcgcgttactta-ttttaaggtgacgataaaataaagag 5508456  T
Q  130 ataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||||||||| ||||| ||| ||||||||||    || |||||| |||||||| |||| ||||||| |||||| ||||||||    
T  5508457 ataagggttaagagatttgaaatttttatc----tgtttgcaatagagcaag-ttacatgttttttgttgcagaaaagtaa 5508532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 2167698 - 2167557
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| |||||||||||||||||| |||||||| |||| |||   | |||||||| ||||||| ||||| | |||||||||||||  ||||| ||| ||||    
T  2167698 ttaccaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaattcacattacttatttttagtttgactataaaata 2167599  T
Q  126 aaata--taagggttagagagttgcaatttttatctttttgc 165  Q
    ||| |   || ||||||||| ||||||||||||||| |||||    
T  2167598 aaagagtaaatggttagagatttgcaatttttatctgtttgc 2167557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 7495129 - 7495048
Alignment:
Q  73 gtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaatataagggttagagagttgcaatttt 154  Q
    ||||||| ||||||| ||||  |||||||||||||| |||||| |||||||||||| |||||||| |||||||| |||||||    
T  7495129 gtcgtttcgtccaaacaattaacgttacttattttttagttgatgatataataaaagataagggtcagagagttacaatttt 7495048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 21325356 - 21325500
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat-- 121  Q
    |||||| |||||||||| ||||||| | |||||| |||| ||||  |||||||||| ||||||| |||| | |||||||| ||||||||| |||||||      
T  21325356 gtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttactta-ttttaagttaacgatataa 21325454  T
Q  122 aataaaa---tataagggttagagagttgcaatttttatctttttgc 165  Q
    |||||||   |  |||||||||||| ||||||||||||||| |||||    
T  21325455 aataaaagagttgaagggttagaga-ttgcaatttttatctatttgc 21325500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 22349421 - 22349509
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| || ||||||||||||||| |||||||| |||| |||   |||||||||| ||||||| ||||| | ||||||||||||    
T  22349421 aatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattttt 22349509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 12754872 - 12754796
Alignment:
Q  161 tttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    |||| |||||||||||| ||||||| || ||||||||||| |||||||| || |||||| ||||||| |||| ||||    
T  12754872 tttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttaggattcttcgaatcccct 12754796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 16229917 - 16229832
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    ||||||||||||||||| |||||    |||||||| | ||||| |||||||||||||| |||||||| || |||||| ||||||| ||||    
T  16229917 agttgcaatttttatctgtttgc----aacagagcgaatttacctgtttttggttgcaaaaaagtaagcagcggttaggattcttcgaat 16229832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 8765261 - 8765331
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    |||||||||||||||||||| |||||| ||||||| |||||||| || | |||||||||||| |||| ||||    
T  8765261 ttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcagcagttaagattcttcgaatcccct 8765331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 28728967 - 28729038
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactt 102  Q
    |||||||||||||||||| |||||||| |||| |||  |||||||||||   ||||| ||||||||||||||    
T  28728967 aagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttactt 28729038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 821601 - 821515
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||| |||||| ||  ||| |||||  |||||||||||    
T  821601 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaattcatgttacttattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 6289915 - 6289957
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatc 62  Q
    |||||||||| |||||||||||||||||| |||||||||||||    
T  6289915 aatcgtttaccaagtaataaagtgataagtagagtatcatatc 6289957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 12411169 - 12411251
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||| ||||||||||||||| || |||||||| |||| |||| ||||||||||| || |||| ||||   |||||||||||||    
T  12411169 ttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggttacttattttt 12411251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 8770030 - 8770119
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||| || |||||||||||||||||| | ||||||||||| |||  ||||||| |||||||  || |||||  |||||||| ||||    
T  8770030 caatcgttaaccaagtaataaagtgataagtaaagtatcatatccacatggattgtccttttgtctgaacaattcttgttacttagtttt 8770119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 8770163 - 8770235
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||||||||||| || ||||||||||| |||||||| || | |||| ||||||| |||| ||||||    
T  8770163 ttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagcagttaggattcttcgaatcccctct 8770235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 8319050 - 8319153
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacga 118  Q
    ||||||||||| ||||||| |||||||||| ||| |||  |||| |||  |||| |||||| || |||| |||||  |||||||| ||||||||||| ||    
T  8319050 caatcgtttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaattcatgttactta-ttttaagttgatga 8319148  T
Q  119 tataa 123  Q
    |||||    
T  8319149 tataa 8319153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 19908319 - 19908528
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt----aagttga 115  Q
    |||||||||| || ||||||| ||||||| | |||||| |||| |||| | | ||||||| ||||||| ||||| ||| || |||||||    |  ||||    
T  19908319 aatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaattcacgtaacctattttttttcagtttga 19908418  T
Q  116 cgatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||||||   ||  ||||||||| |   ||| ||||||||| |||||||    |||| ||||||||||| | |||||||||||| |||||||| || |     
T  19908419 cgatataa---aagttaagggttaaaagattggaatttttatttttttgc----aacaaagcaagtttacctatttttggttgcagaaaagtaagcagca 19908511  T
Q  216 gttaagattctttgaat 232  Q
    |||| ||||||| ||||    
T  19908512 gttaggattcttcgaat 19908528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 12759403 - 12759458
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||  ||||||||||    
T  12759403 gtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgttt 12759458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 18736758 - 18736672
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| |||||||||||| ||||| ||| |||| ||||||||    ||||||||| ||| ||| || ||||||||||||||||    
T  18736758 aatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttcgtctaaacaactcgcgttacttatttt 18736672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 8557204 - 8557130
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||||||||||| |||||||| |||| |||  |||||||||||  |  ||| |||| |||||||||||||    
T  8557204 agtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 10917930 - 10918016
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| || ||||||||||||||| |||||||| |||| |||  |||||| |||| ||| ||| | ||||| |||| |||||    
T  10917930 aatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaacagttcgcattacctattt 10918016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 21825955 - 21825870
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||||  |||||||||||| |||| |||||||| |||| |||  |||| | |||| ||||||| | ||||||||||||||||    
T  21825955 aatcgtttaccgagtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttacttattt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 27413838 - 27413780
Alignment:
Q  169 caacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctt 227  Q
    ||||||||| | ||||| |||||||||||||| |||||||| || |||||| |||||||    
T  27413838 caacagagcgattttacctgtttttggttgcagaaaagtaagcagcggttaggattctt 27413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 8170026 - 8170099
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||| ||| | ||||| |||||||||||||| |||||||  || |||||| ||||||| |||| ||||||    
T  8170026 ttgcaacatagcgaatttacctgtttttggttgcagaaaagtatgcagcggttaggattcttcgaatcccctct 8170099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 8889228 - 8889151
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||  |||| |||  ||||||| ||| || | || ||||| ||||||||||||||    
T  8889228 aagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttattttt 8889151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 10744914 - 10744951
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatc 57  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  10744914 aatcgtttaccaagtaataaagtgataagtagagtatc 10744951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 19909902 - 19909846
Alignment:
Q  181 tttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    ||||| ||||||| |||||| |||||||| || |||||| |||||||||||| ||||    
T  19909902 tttacctgttttttgttgcagaaaagtaagcagcggttaggattctttgaatcccct 19909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 9e-42; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 16365717 - 16365942
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||| | ||| |||||||| |||| |||  |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  16365717 aatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttatttttaagttgacgat 16365816  T
Q  120 ataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    ||||||||| |  ||||| ||||||| || ||||||| |||| ||||| |    | ||||||||| || |||||||||||||| |||||||| || ||||    
T  16365817 ataataaaagagttaaggtttagagattttcaattttgatctatttgcat----ctgagcaagtt-acatgtttttggttgcaaaaaagtaagcagcggt 16365911  T
Q  218 taagattctttgaattccctctatttatatt 248  Q
    || ||||||| ||||  || |||||||||||    
T  16365912 taggattcttcgaatctcccctatttatatt 16365942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 248
Target Start/End: Original strand, 5108583 - 5108801
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataat 124  Q
    ||||| ||||||||||||| |||| |||||||| |||| |||| ||||||||||| ||||||| ||||||    ||||||||||||||||||||||||||    
T  5108583 tttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgaac-acttatttttaagttgacgatataat 5108680  T
Q  125 aaaata-ta-agggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaaga 222  Q
    |||| | || | |||||||||||| |||||||||||    || |||||| |||||||||||||||| ||||||||||| |||||||| || |||||| ||    
T  5108681 aaaagagtatatggttagagagttacaatttttatc----tgtttgcaagagagcaagtttacttgattttggttgcagaaaagtaagcagcggttagga 5108776  T
Q  223 ttctttgaattccctctatttatatt 248  Q
    ||||||||| |||| |||||||||||    
T  5108777 ttctttgaa-tccccctatttatatt 5108801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 225
Target Start/End: Complemental strand, 3329740 - 3329542
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacgatata 122  Q
    ||||| |||||||||||||||||| |||||||| |||| |||  |||||||||||  |||||| |||  |||||||||||||||  ||||| |   ||||    
T  3329740 tttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgttacttatttttgtaagtttaacgtata 3329641  T
Q  123 ataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaaga 222  Q
    || ||| |||||||||||||||||||||||||||||| |||||    |||| |||||||||||||||||||||||||| |||||||| || |||||| ||    
T  3329640 atgaaagataagggttagagagttgcaatttttatctgtttgc----aacatagcaagtttacttgtttttggttgcagaaaagtaagcagcggttagga 3329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 2563830 - 2564016
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacg 117  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||| ||||||||||| ||||||| |||| | ||||||||||| |  ||||| |||    
T  2563830 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttatttctgtaagttcacg 2563928  T
Q  118 atataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||||||||||| |||||||||||||||||| ||||||||||    || |||||||||||||||||||| || ||| | ||||| ||||||||    
T  2563929 atataataaaagataagggttagagagttgaaatttttatc----tgtttgcaacagagcaagtttacctgctttagtttgcagaaaagtaa 2564016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 7318286 - 7318507
Alignment:
Q  21 atcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgata 120  Q
    ||||||||| |||||||||||||||||| |||||||| |||| |||  ||||||||||| ||| ||| |  |||| ||||||| ||||||||||||||||    
T  7318286 atcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagctcgcattactta-ttttaagttgacgata 7318384  T
Q  121 t--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |  ||||||  | |||||||||||||| ||||||||||||||    || ||||||||||||||| |||||| |||||||||||| ||||| ||||||||     
T  7318385 taaaataaaagagataagggttagaga-ttgcaatttttatc----tgtttgcaacagagcaag-ttacttctttttggttgcagaaaaggaaacaacga 7318478  T
Q  217 ttaagattctttgaattccctctatttat 245  Q
    ||| || |||||  | |||| ||||||||    
T  7318479 ttaggactcttttgaatccccctatttat 7318507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 15869607 - 15869831
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| ||||  ||| |||| | |||||||| ||||| |  |||||||||| |||||||||||||||    
T  15869607 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtctgcgttactta-ttttaagttgacgat 15869705  T
Q  120 at--aataaaat--ataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||||  ||||||||| |||| |||||| |||||||    || |||||| |||  ||| |||| |||||||||||||||||||||||||||||    
T  15869706 ataaaataaaatagataagggtttgaga-ttgcaa-ttttatc----tgtttgcaatagaaaaag-ttacctgtttttggttgcataaaagtaaacaacg 15869798  T
Q  216 gttaagattctttgaattccctctatttatatt 248  Q
    |||| || ||||||||| ||| || ||||||||    
T  15869799 gttaggactctttgaatcccccctgtttatatt 15869831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 8979093 - 8978868
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||| ||||| |||||||||||||||||| ||||||||||||| |||  |||||| |||| ||||||| ||||||| |||||||||||  |||| |||||    
T  8979093 aatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattttggtaagtttgac 8978994  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
     |||||| || ||| ||||||||| || |||||||||| |||    || |||||| ||| ||||||||| |||||||||||||| |||| ||| || | |    
T  8978993 aatataa-aagataaaagggttag-gatttgcaattttcatc----tgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagcagcag 8978900  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| |||||||| ||| |||||| ||||||||    
T  8978899 ttaggattctttaaatcccctctgtttatatt 8978868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 248
Target Start/End: Complemental strand, 39273258 - 39273038
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgacgata 120  Q
    ||||||||||||||||||||||||| |||||||| |||  | |  ||||||||||| |||||||||||| | ||||||||||||  |||| ||||||||     
T  39273258 gtttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgtaagtttgacgat- 39273160  T
Q  121 taataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
      ||||||  ||||||||| | |||||||| ||| |||| |    |||||||||||||||||||| | |||||||||||| |||||||| || ||||||     
T  39273159 --ataaaagttaagggttataaagttgcaaatttaatctat----ttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttag 39273066  T
Q  221 gattctttgaattccctctatttatatt 248  Q
    ||| ||| ||||  ||||| ||||||||    
T  39273065 gatccttcgaatctcctctgtttatatt 39273038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 12329694 - 12329802
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||| ||| ||||||  |||||||  |||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  12329694 aatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttttgcccaaataatccgcgttacttatttttaagttgacgat 12329793  T
Q  120 ataataaaa 128  Q
    |||||||||    
T  12329794 ataataaaa 12329802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 209
Target Start/End: Complemental strand, 7492338 - 7492164
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaata- 130  Q
    ||||||||| ||||||| |||||||| |||| |||| |||||| |||| || |||| |||| || |||||||||||||  |||| |||||||||||| |     
T  7492338 agtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttatttttattttgatgatataataaaagag 7492239  T
Q  131 -taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
     ||||||||||||| |||||||||||| |    || ||||||||||||||| |||| |||||||||||||| ||||||||    
T  7492238 ttaagggttagagatttgcaatttttaac----tgtttgcaacagagcaag-ttacctgtttttggttgcagaaaagtaa 7492164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 9731714 - 9731518
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  ||||| |||||||||||| |||||||| || | |||| ||||||||||| ||||||| |||||||||||||||||||||  |||| |||    
T  9731714 aatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttacttatttttagtttgatgat 9731615  T
Q  120 ataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    | ||||||| |  || |  ||||||| ||||||||||||||| |     || |||| |||||| |||| ||||||||||||||||||||||| || ||||    
T  9731614 aaaataaaagagttacgaattagagatttgcaatttttatctat----gtgtaacatagcaag-ttacctgtttttggttgcataaaagtaagcagcggt 9731520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 248
Target Start/End: Original strand, 4785854 - 4786077
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aa 123  Q
    |||| |||||||||||||||||| ||||||||| ||| |||  ||||||||||| ||||||  | ||| |||||||||||||| ||||||||||||  ||    
T  4785854 ttaccaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt-agttgacgatataaaa 4785952  T
Q  124 taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaag 221  Q
    ||||| |  ||||||||||||| ||  ||||||| | | | |  |||||| |||||||| |||| |||||||||||||| |||||||| || |||||| |    
T  4785953 taaaagagttaagggttagagatttttaattttt-tttatctatttgcaatagagcaag-ttacctgtttttggttgcagaaaagtaagcagcggttagg 4786050  T
Q  222 attctttgaattccctctatttatatt 248  Q
    |||||| |||| ||  |||||||||||    
T  4786051 attcttcgaatccctcctatttatatt 4786077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 232
Target Start/End: Complemental strand, 1848303 - 1848106
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagtt-gacgatataataaa 127  Q
    |||||||||||||||||| | |||||| |||| ||   ||||||| ||| ||||||| |||| |||||||||||||||  ||||| ||||||||||  ||    
T  1848303 aagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttttgtaagtttgacgatataa--aa 1848206  T
Q  128 atataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattct 226  Q
    || |||||||||||||| ||||||||||||||| ||||     |||||||||||||||| |||||| ||||||| |||||||| || |||||| ||||||    
T  1848205 at-taagggttagagagcttgcaatttttatctgtttga----aacagagcaagtttacctgtttt-ggttgcagaaaagtaagcagcggttatgattct 1848112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 10587111 - 10586897
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||  ||||||||||| ||| ||| || ||  |||||||| ||||||||| || ||    
T  10587111 aatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaactcatgttactta-ttttaagtttacaat 10587013  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | |||||||||| ||| ||||||||||||||    || |||||||||||||||  ||| ||||| |||||||| |||||||| ||  |    
T  10587012 ataaaataaaagaaataagggttaaaga-ttgcaatttttatc----tgtttgcaacagagcaag-atacatgtttctggttgcaaaaaagtaagcagtg 10586919  T
Q  216 gttaagattctttgaattccct 237  Q
    ||||||| ||||||||| ||||    
T  10586918 gttaagactctttgaatcccct 10586897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 3734613 - 3734829
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--a 122  Q
    ||||| |||||||||||||||||| |||||||| |||| |||   ||||| |||| ||||||| ||||| ||||||||| |||||||||||||||||  |    
T  3734613 tttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttactta-ttttaagttgacgatataaa 3734711  T
Q  123 ataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
    |||||| |  ||||||||| ||| |||||| |||||||    || ||||||||||||||| |||| || ||||||||||| |||||||| ||| |||||     
T  3734712 ataaaagagttaagggttaaaga-ttgcaaattttatc----tgtttgcaacagagcaag-ttacctg-ttttggttgcagaaaagtaagcaatggttag 3734804  T
Q  221 gattctttgaattccctctatttat 245  Q
    || |||||||||  || ||||||||    
T  3734805 gactctttgaatctcccctatttat 3734829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 13759947 - 13759859
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| || ||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||| | ||||||||||||||||||    
T  13759947 aatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttattttt 13759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 232
Target Start/End: Complemental strand, 17153237 - 17153032
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacg--atat 121  Q
    |||||| |||||| ||||||||||| |||||||| |||| |||  ||||||||||| ||| ||| |  |||||||||||| |||||||||||||  |||     
T  17153237 gtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagctcgcgttactta-ttttaagttgacgacataa 17153139  T
Q  122 aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    ||||||  | |||||||||||||| |||  |||||||||    || |||||||| |||||| |||| |||||||||||||| |||||||| || ||||||    
T  17153138 aataaaagagataagggttagaga-ttgttatttttatc----tgtttgcaacaaagcaag-ttacctgtttttggttgcagaaaagtaagcagcggtta 17153045  T
Q  220 agattctttgaat 232  Q
     || |||||||||    
T  17153044 tgactctttgaat 17153032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 9864409 - 9864327
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||| ||| ||| |||| |||||||||||||    
T  9864409 gtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgttacttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 19153310 - 19153493
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| |||||||||||||||||   |||||||| |||  || || |||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  19153310 aatcttttaccaagtaataaagtgataaat-gagtatcacatccgca-tggttgtcgttttgtccaaataactcgcgttacttatttt-aaggtgacgat 19153406  T
Q  120 ataataaa-atataagggtta-gagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    | |||||| | |||||||||| | || ||||||||||||||| |||||    |||| | |||||| || |||||||||||||| ||||||||    
T  19153407 aaaataaagagataagggttaagggatttgcaatttttatctgtttgc----aacataacaagtt-acctgtttttggttgcagaaaagtaa 19153493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 20752709 - 20752892
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| |||||||||||||||||   |||||||| |||  || || |||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  20752709 aatcttttaccaagtaataaagtgataaat-gagtatcacatccgca-tggttgtcgttttgtccaaataactcgcgttacttatttt-aaggtgacgat 20752805  T
Q  120 ataataaa-atataagggtta-gagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    | |||||| | |||||||||| | || ||||||||||||||| |||||    |||| | |||||| || |||||||||||||| ||||||||    
T  20752806 aaaataaagagataagggttaagggatttgcaatttttatctgtttgc----aacataacaagtt-acctgtttttggttgcagaaaagtaa 20752892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 2350834 - 2350692
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| |||||||||| || |||| ||| |||| |||| |||  ||||||||||||||||||||||| |||||||  ||||||||  |||| |||    
T  2350834 aatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaataatccgcgttaaatatttttagtttgaagat 2350735  T
Q  120 ataataaaata---taagggttagagagttgcaatttttatct 159  Q
    | |||||||||    |||||||||||| || ||||||||||||    
T  2350734 aaaataaaatagttaaagggttagagattttcaatttttatct 2350692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 1587693 - 1587854
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||  ||| || ||||  |||||| |||||||||||| || ||||   ||||||||    
T  1587693 aatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaattcgcgttaccta-ttttgttttgacgat 1587791  T
Q  120 at--aataaaata-taagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtt 182  Q
    ||  ||||||| | | |||||||||||| ||||||||||||    |||| |||||||||||||||||    
T  1587792 ataaaataaaagatttagggttagagagattgcaattttta----tttgtttgcaacagagcaagtt 1587854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 8054145 - 8053926
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||  |||||||| |||| |||   |||||||||   |||||| ||||| | |||||||||||  ||||||||||    
T  8054145 aatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttatttttgtaagttgacg 8054049  T
Q  118 atataataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||   |||||| ||||| ||| | ||| ||| || |||||||| |    |||||| | ||||||||||| || ||||||||||| |||||||| || | |    
T  8054048 at---ataaaagataagagttaaaagacttgtaaattttatctat----ttgcaatatagcaagtttacctg-ttttggttgcagaaaagtaagcagcag 8053957  T
Q  217 ttaagattctttgaattccctctatttatat 247  Q
    ||| |||||||||||| |||||| |||||||    
T  8053956 ttaggattctttgaatcccctctgtttatat 8053926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 18662453 - 18662539
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| ||| | |||||||||||| |||||||| |||| |||| ||||||||||| ||||||| ||||| ||||||||||||    
T  18662453 aatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 4818854 - 4818950
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||| |||||||||||||||||| ||||||||| ||| |||  ||||||||||| ||||||  | ||| |||||||||||||| ||||||||||||||    
T  4818854 ttaccaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt-agttgacgatataa 4818950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 11803103 - 11803180
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| ||||||| ||||||||||||||||||||    
T  11803103 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttattttt 11803180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 9574419 - 9574521
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||| |||||||||||||| |||||||| ||||||||  |||||| |||| ||| |||  | |||||||| ||| |||||||||||||||    
T  9574419 aatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgactcgcgttattta-ttttaagttgacgat 9574517  T
Q  120 ataa 123  Q
    ||||    
T  9574518 ataa 9574521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 31492942 - 31493029
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| | |||||||||||||||| |||||||| |||| |||  ||||||||||||||||||| |||| |  |||||||||||    
T  31492942 aatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatttgttttacttatttt 31493029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 4579110 - 4579195
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||||||||||||| |||||||| |||||||| |||| | |  ||||||| ||||||||||| |||||| |||||||||||    
T  4579110 aatcgtttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgttacttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 8054576 - 8054471
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| || ||||||||||||||| |||||||| |||  |||   |||||||||| ||||||| |||||  ||||||||||||  ||||||||||    
T  8054576 aatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttatttttgtaagttgacg 8054477  T
Q  118 atataa 123  Q
    ||||||    
T  8054476 atataa 8054471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 232
Target Start/End: Complemental strand, 18369063 - 18368857
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgac-gata 120  Q
    |||||| |||||||||||||||||| |||||||  |||| | |  ||||||||||| ||||||| |||||  ||||||||||||  |||||||||  |||    
T  18369063 gtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttatttttataagttgacaaata 18368964  T
Q  121 taataaaatataagggttagagagt--tgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    ||| || ||| |||||||||| |||  |||||||||||||    || |||||||| |||||| |||| || ||||||||| | ||||||||  |||||||    
T  18368963 taa-aagata-aagggttagaaagtcgtgcaatttttatc----tgtttgcaacaaagcaag-ttacctgcttttggttgtagaaaagtaagaaacggtt 18368871  T
Q  219 aagattctttgaat 232  Q
    | ||||| ||||||    
T  18368870 aggattccttgaat 18368857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 1584555 - 1584662
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacga 118  Q
    ||||| ||||| ||||||||||||||||||  ||||||| |||| |||  |||||| |||| ||| ||| || |||||||||||| ||||||||||||||    
T  1584555 caatcatttaccaagtaataaagtgataag-tgagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgttactta-ttttaagttgacga 1584652  T
Q  119 tataataaaa 128  Q
    || |||||||    
T  1584653 taaaataaaa 1584662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 11221251 - 11221163
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    ||||||||||||||||||||| ||||||| |||||||  |||| |||  ||||||||||| ||  ||| |||| |||||||||||||||    
T  11221251 aatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattttt 11221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 3191146 - 3191044
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    ||||||||| | ||||||||||||| ||| | ||||| ||||||| |  ||||||||||| ||||||| |||||| |||| ||| ||||||||||| |||    
T  3191146 aatcgtttatttagtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaattcgtgttattta-ttttaagttgaggat 3191048  T
Q  120 ataa 123  Q
    ||||    
T  3191047 ataa 3191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 4986567 - 4986713
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||| | || |||||||  || | |||  ||||||||||| ||| |||||  |||||||||||| |||||||||||||||    
T  4986567 aatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttactta-ttttaagttgacgat 4986665  T
Q  120 ataataaaata----taagggttagagagttgcaatttttatctttttg 164  Q
    | || | || |    ||||||||||||| ||||||||||||||| ||||    
T  4986666 aaaaaataaaagtgttaagggttagaga-ttgcaatttttatctgtttg 4986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 4990665 - 4990811
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||| | || |||||||  || | |||  ||||||||||| ||| |||||  |||||||||||| |||||||||||||||    
T  4990665 aatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttactta-ttttaagttgacgat 4990763  T
Q  120 ataataaaata----taagggttagagagttgcaatttttatctttttg 164  Q
    | || | || |    ||||||||||||| ||||||||||||||| ||||    
T  4990764 aaaaaataaaagtgttaagggttagaga-ttgcaatttttatctgtttg 4990811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 6042473 - 6042676
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| | |||||||| || |||| |||||||| |||| |||  | ||||||||| || |||| |||| ||||||||||||||||  |||||| |    
T  6042473 aatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgttacttatttttagtttgacggt 6042571  T
Q  120 ataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    |||||||||       | ||||  |||||||||||||    | || ||||||||||| |||||||| | |||||||||||| |||| ||| || ||||||    
T  6042572 ataataaaa-------gataga-tgttgcaattttta----tatgtttgcaacagag-aagtttacctttttttggttgcagaaaaataagcagcggtta 6042658  T
Q  220 agattctttgaattccct 237  Q
     |||||||||||| ||||    
T  6042659 ggattctttgaatcccct 6042676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 12181620 - 12181759
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgt-ccaaataattcgcgttacttatttttaagttgacga 118  Q
    |||||||||  |||||||||||||| ||| |||||| | |||| |||   |||||||||| || ||||| |||||| |||||||| ||||||||||||||    
T  12181620 aatcgtttataaagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaattcgagttactta-ttttaagttgacga 12181718  T
Q  119 tataataaaa---tataagggttagagagttgcaattttta 156  Q
    || | |||||   |  |||||||||||| ||||||||||||    
T  12181719 taaattaaaagagttgaagggttagagatttgcaattttta 12181759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 16058977 - 16058904
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| || | |||| ||||||| |||| ||||||    
T  16058977 ttgcaacagagcaaatttacttgtttttggttgcagtaaagtaagcagctgttaggattcttcgaatcccctct 16058904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 20582271 - 20582476
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agttgacg 117  Q
    |||||||||| || |||||||||||||||    ||||| |||| |||  ||| |||||||  |||| | ||||| ||||||||| |||||  ||||||||    
T  20582271 aatcgtttaccaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttcttccatacaattctcgttacttaattttataagttgacg 20582367  T
Q  118 atataataaaatataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||||   ||  ||||||||| | ||  ||||||||||||||| |||||    |||||||||||||||| || ||||||||||| |||||||| || |     
T  20582368 atataa---aaggtaagggttaaaaagatttgcaatttttatctatttgc----aacagagcaagtttacctg-ttttggttgcagaaaagtaagcagca 20582459  T
Q  216 gttaagattctttgaat 232  Q
    |||| ||||||| ||||    
T  20582460 gttaggattcttcgaat 20582476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 23100039 - 23099966
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattc 93  Q
    |||||||||| || ||||||||||||||| |||||||| |||| |||  ||||||||||| ||||||| |||||    
T  23100039 aatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattc 23099966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 247
Target Start/End: Original strand, 8877444 - 8877657
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agttgacgatataataaaa 128  Q
    ||||||||| |||||||| |||||||| |||| |||  ||||| | ||||||| ||| ||||| |  ||||||||||||  |||||||  |||||   ||    
T  8877444 aagtaataaggtgataagtagagtatcgtatccacatggattgcccttttgtcgaaacaattctctgtacttatttttataagttgacagtataa---aa 8877540  T
Q  129 tataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaa-agtaaacaacggttaagattc 225  Q
      ||||||||| | |   ||||||||||||||| |||||    |||||||||||||||| | |||| ||||||| ||| ||||| || |||||| |||||    
T  8877541 gttaagggttaaaaaaacttgcaatttttatctgtttgc----aacagagcaagtttacctatttt-ggttgcaaaaatagtaagcagcggttaggattc 8877635  T
Q  226 tttgaattccctctatttatat 247  Q
    ||||||| |||||||| |||||    
T  8877636 tttgaatcccctctatatatat 8877657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 7397317 - 7397372
Alignment:
Q  187 tgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatt 242  Q
    |||||||||||||| |||||||| || |||||| ||||||| ||||||||||||||    
T  7397317 tgtttttggttgcagaaaagtaagcagcggttaggattcttcgaattccctctatt 7397372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 10648590 - 10648677
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| |||||||||||||||||  ||||||||||||   ||  |||||||||||  || ||| |||||| ||||||||||||    
T  10648590 aatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttt 10648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 10584573 - 10584487
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||  |||||||||||||||||||| |||||| |||| |||  |||||||||||  |  ||| |||||| |||||||||||    
T  10584573 aatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 9131038 - 9131131
Alignment:
Q  134 gggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||||||||| |||||||||||||    ||| |||||| |||||||||| ||| ||||||||||||| |||||||| |  |||||| ||||||| ||||    
T  9131038 gggttagagatttgcaatttttat----ttgtttgcaatagagcaagttaact-gtttttggttgcaaaaaagtaagctgcggttaggattcttcgaat 9131131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 13418659 - 13418756
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctattt 243  Q
    |||||||||||||||| |||||    |||||||||||||||| || ||||| |||||  ||||||| || |||||| |||||||||||| | |||||| |    
T  13418659 gttgcaatttttatctgtttgc----aacagagcaagtttacctg-ttttgattgcagcaaagtaagcagcggttaggattctttgaatccactctatat 13418753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 245
Target Start/End: Original strand, 6013624 - 6013825
Alignment:
Q  39 aagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aataaaata--taag 134  Q
    |||||||||| |||||||| |||| |||| |||| || |||| |||||| |||| || ||||||| |||||  |||| |||||  ||||||| |   |||    
T  6013624 aagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttactta-ttttagtttgatgatataaaataaaagagtaaag 6013722  T
Q  135 ggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattc 234  Q
    |||||| || |||||||||||   | |||| |||||||| ||||| ||||| ||  |||||||||| |||||| | ||||||||| || |||||||| ||    
T  6013723 ggttagcga-ttgcaattttt---tatttgtttgcaacaaagcaa-tttacatg--tttggttgcagaaaagtgagcaacggttatgactctttgaa-tc 6013814  T
Q  235 cctctatttat 245  Q
    |||||||||||    
T  6013815 cctctatttat 6013825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 10937614 - 10937673
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||||||| |||||||||||||||||| | |||||| |||| |||  |||||||||||    
T  10937614 aatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 10937673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 16306717 - 16306792
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||||||||||| |||||||| ||||||||| |||| || |||  || ||| |||| || ||||||||||    
T  16306717 aagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatttgcattacttattt 16306792  T

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Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 9245193 - 9245279
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||| ||| || ||||||||||||| |||| |||  ||||||| ||| ||  ||| |||||| |||||||||||    
T  9245193 aatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttacttattt 9245279  T

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Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 21227191 - 21227237
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctaca 66  Q
    |||| ||||| |||||||||||||||||| |||||||| ||||||||    
T  21227191 aatcatttacaaagtaataaagtgataagtagagtatcgtatctaca 21227237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 4449003 - 4449080
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| | |||||  |||| |||  || |||| ||||||||||| |||||  |||||||||||||    
T  4449003 aagtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaattcttgttacttattttt 4449080  T

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Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 4449146 - 4449195
Alignment:
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||| ||||||||||| ||||||  ||||||||||| ||||||    
T  4449146 ttttggttgcaaaaaagtaaacagcggttagaattctttgaatcccctct 4449195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 11803224 - 11803296
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||||||||||| || ||||||||||| | |||||| || |||||| |||| || |||| ||||||    
T  11803224 ttgcaacagagcaagtttacctg-ttttggttgcagagaagtaaccagcggttaggattattcgaatcccctct 11803296  T

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Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 17203047 - 17203123
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||| ||||| |||||||| |||  ||   ||||||||||| ||||||| ||| ||||||||||||||||    
T  17203047 aagtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttattttt 17203123  T

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Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 21102374 - 21102321
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||| |||||||||||||||||| |||||||  |||  ||||||||||||||||    
T  21102374 ttaccaagtaataaagtgataagtagagtattgtattcacaatgattgtcgttt 21102321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 22339381 - 22339312
Alignment:
Q  37 taaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||||| | ||||||  |||  ||| ||||||||||| ||||||| ||||||| ||||||||||    
T  22339381 taaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgccttacttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 10584401 - 10584349
Alignment:
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatt 242  Q
    ||||||||||| ||| || | ||||||||| |||| |||||||||||||||||    
T  10584401 ttttggttgcagaaatgttagcaacggttatgattttttgaattccctctatt 10584349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 13418544 - 13418651
Alignment:
Q  19 caatcgtttactaagtaataaa-gtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactta--tttttaagttga 115  Q
    |||||||| || |||||||||| |||||||| |||||||| |||| | |  ||||||| ||| ||||||| | ||  |||||||||  ||||||||||||    
T  13418544 caatcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttatttttttaagttga 13418643  T
Q  116 cgatataa 123  Q
    || |||||    
T  13418644 cggtataa 13418651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 17216829 - 17217027
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttact--tatttttaagttgacg 117  Q
    |||||||||| ||| |||||||||||||| ||||||||||||| |||  ||||||||||| ||||||| ||||| |||||||  ||||| |||||||| |    
T  17216829 aatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatatttgtaagttgatg 17216928  T
Q  118 atataat--aaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    |||||||  || ||| |||||||||| ||||||||||||||||    || |||||||||||||||||||| || ||||||||| | |||||||| |||||    
T  17216929 atataatacaagataaaagggttagaaagttgcaatttttatc----tgtttgcaacagagcaagtttacatg-ttttggttgtagaaaagtaagcaacg 17217023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 13908866 - 13909075
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt---aagttgac 116  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||| ||||||||||| ||||||| |||||| |||||||||||||   |  |||||    
T  13908866 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttttgtaattttgac 13908965  T
Q  117 gatataataaaatataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    |||||    |||  ||| ||||||| ||  ||||||||||||||    || |||||||||||||||||||| |||||||||||||| |||||||| || |    
T  13908966 gatat----aaaagtaaaggttagaaagtcttgcaatttttatc----tgtttgcaacagagcaagtttacctgtttttggttgcaaaaaagtaagcagc 13909057  T
Q  215 ggttaagattctttgaat 232  Q
    ||||| ||||||||||||    
T  13909058 ggttaggattctttgaat 13909075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 13128961 - 13128774
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta-agttgacga 118  Q
    |||||||||| |||||||||| ||||||| |||||||  |||| | |  ||||||||||| ||||||| || |||||||||||||||||  ||||||| |    
T  13128961 aatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttacttatttttttagttgacca 13128862  T
Q  119 tataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgttttt-ggttgcataaaagtaa 209  Q
    |||||||||| |||||||||||||||||||||||||||    |||| ||| ||||||| |||||| | ||||||| ||||||| ||||||||    
T  13128861 tataataaaagataagggttagagagttgcaattttta----tttgtttggaacagagtaagtttgcctgtttttcggttgcagaaaagtaa 13128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 17337210 - 17336997
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaatat 131  Q
    |||||||| |||||||| |||||||| |||| | |  ||||||| ||| ||||||| |||| |||||||||||||||| |||||||||||||||||| |     
T  17337210 agtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttattttta-gttgacgatataataaaagag 17337112  T
Q  132 --aagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttg 229  Q
      ||||||| |||| ||||||||||||||| ||| |    |||||||||||||||| ||||||||||||||||||||||| ||  | ||| ||||||| |    
T  17337111 taaagggtttgagatttgcaatttttatctgtttac----aacagagcaagtttacctgtttttggttgcataaaagtaagcagagattatgattcttcg 17337016  T
Q  230 aattccctctatttatatt 248  Q
    ||| |||  ||||||||||    
T  17337015 aatcccccttatttatatt 17336997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 14648907 - 14649115
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| || | |||||||||||  || |||||  ||| |||||||| |||||||||||||||    
T  14648907 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccac-aggattgtcgtttcttctaaatagctcgtgttactta-ttttaagttgacgat 14649004  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | |||||||||||||| || |||||||||||    || ||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  14649005 ataaaataaaagacataagggttagaga-tttcaatttttatc----tgtttgcaacagagcaag-ttacttgtttttggttgtagaaaaggaaacaacg 14649098  T
Q  216 gttaagattctttgaat 232  Q
    |||| || |||||||||    
T  14649099 gttaggactctttgaat 14649115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 15164779 - 15164963
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagtt-gac 116  Q
    |||||||||| ||||||| || | |||||||||||||| |||| |||  ||||||| ||| ||||||| |||| |||||||||||||||  ||||| |||    
T  15164779 aatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttatttttgtaagtttgac 15164878  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||||   ||  ||||||||||||||||||||||||||    |||| |||||||||||||||||||| || ||||||||||| ||||||||    
T  15164879 gatataa---aagttaagggttagagagttgcaattttta----tttgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaa 15164963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 7582309 - 7582534
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||| ||||| |||||||||||||||||| ||||||||||||| |||  |||||| |||| ||||||| |||  || |||||||||||  |||| |||||    
T  7582309 aatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttattttggtaagtttgac 7582408  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||||||| || ||| |||| |||| || |||||||||| |||    || |||||| ||| ||||||||| |||||||||||||| |||| ||| ||  ||    
T  7582409 gatataa-aagataaaaggcttag-gatttgcaattttcatc----tgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagcagtgg 7582502  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| |||||||||||| |||||| ||||||||    
T  7582503 ttaggattctttgaatcccctctgtttatatt 7582534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 248
Target Start/End: Complemental strand, 24639535 - 24639324
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| |||||||||||||||||| |||||||| |||| |||  |||| |||||||||||||| |||| |       ||  ||| ||||||||||||||||    
T  24639535 ttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatttg-------taacttttagttgacgatataata 24639443  T
Q  126 aaatat--aagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagat 223  Q
    |||||   |||||||||||| ||| ||||||      |||| |||||||||||||||||||| |||||| ||||||| |||||||| ||  ||||| |||    
T  24639442 aaatagtaaagggttagagatttgtaatttta-----tttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaagcagtggttaggat 24639348  T
Q  224 tctttgaattccctctatttatatt 248  Q
    |||||||| ||||||||||||||||    
T  24639347 tctttgaa-tccctctatttatatt 24639324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 19562265 - 19562046
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt-aagtt-gacg 117  Q
    |||| ||||| |||||||||||||||||| | |||||| | || ||||  ||||||||||  |||||| |||| |  |||||||||||| ||||| |||     
T  19562265 aatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatttgtattacttattttttaagtttgaca 19562166  T
Q  118 atataataaaatataa--gggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
     |||||||||| ||||  ||||||   | ||||||||||||||| |||||    |||||||||||||||| |||||||||||||| |||||||| || ||    
T  19562165 ttataataaaagataaaagggttatttaattgcaatttttatctctttgc----aacagagcaagtttacctgtttttggttgcagaaaagtaatcagcg 19562070  T
Q  216 gttaagattctttgaattccctct 239  Q
    ||||  |||||| |||| ||||||    
T  19562069 gttagaattcttcgaatcccctct 19562046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 13692756 - 13692668
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||  ||||||||||| | ||||| |||||| |||||||||||||    
T  13692756 aatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttacttattttt 13692668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 194
Target Start/End: Complemental strand, 16730486 - 16730316
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    ||||| |||| ||| || ||||||||||| |||||||| |||| | || |||| |||||| ||||||| || ||||||||||||||||  |||| |||||    
T  16730486 aatcgcttacgaagaaagaaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttatttttgtaagtttgac 16730387  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttg 194  Q
     ||   ||||||  ||||||||||| ||||||||||||||||    || |||||||||||||||||||| ||||||||    
T  16730386 aat---ataaaagttaagggttagaaagttgcaatttttatc----tgtttgcaacagagcaagtttacctgtttttg 16730316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 20315012 - 20315098
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||| ||||||| ||| ||||||||| |||| ||||||||||| ||||||| |||| |||||||||||||    
T  20315012 aatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 19492787 - 19492574
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| ||||||||||| |||||| |||||||| |||| ||||  ||||||||||  |||||| |||||||||||||||||||  || ||||||     
T  19492787 aatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttatttttgtaggttgac- 19492689  T
Q  118 atataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
             |||||||  |||||   |||||||| ||||    |||| |||||||| ||||||||||| |||||||||||||| |||||||| |  ||||    
T  19492688 ---------aatataaaagttag---gttgcaatattta----tttgtttgcaacacagcaagtttacatgtttttggttgcagaaaagtaagcggcggt 19492605  T
Q  218 taagattctttgaattccctctatttatatt 248  Q
    || ||||||| |||| ||| || ||||||||    
T  19492604 taggattcttcgaatcccccctgtttatatt 19492574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 12578353 - 12578251
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| || ||||||||||||||  |||||||| |||| |||  ||||||||||||||||||| |||| ||||| |||| |||||||||||||||    
T  12578353 aatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttctta-ttttaagttgacgat 12578255  T
Q  120 ataa 123  Q
    ||||    
T  12578254 ataa 12578251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 17672014 - 17672174
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||  |||| |||  |||||| |||| ||| ||| || |||||||||||||||| ||||| |||||    
T  17672014 aatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaactcgcgttacttatttt-aagttaacgat 17672112  T
Q  120 ataa--taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtt 182  Q
    ||||  ||||| |  ||| ||||||||| ||||||||||||||| |||||    |||||||||||||    
T  17672113 ataaaataaaagagttaaaggttagaga-ttgcaatttttatctgtttgc----aacagagcaagtt 17672174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 5679217 - 5679363
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||||| || |||||||| ||||||||   | | | |||| ||||||| ||||||||||||||| ||||||||| |||||    
T  5679217 aatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttactta-ttttaagttaacgat 5679315  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttatctttttg 164  Q
    ||  ||||||| |  ||||||||||| | ||||||||||||||| ||||    
T  5679316 ataaaataaaagagttaagggttagaca-ttgcaatttttatctgtttg 5679363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 19882652 - 19882738
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||  ||||||||||||||| || |||||||| |||| |||  ||||||||||| ||||||| ||||||||||||||||||    
T  19882652 aatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 19929762 - 19929549
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| |||||| ||||||||||  |||||||| |||| |||  ||||||||||| ||| |||||   || |||||||| |||||||||||| ||    
T  19929762 aatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcccgtgttactta-ttttaagttgacaat 19929664  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | |||||||||| ||| || |||||||||||    || ||||||||||||||  |||| |||||||||||||| ||||| |||||||     
T  19929663 ataaaataaaagagataagggttaaaga-tttcaatttttatc----tgtttgcaacagagcaa-attacatgtttttggttgcagaaaaggaaacaaca 19929570  T
Q  216 gttaagattctttgaattccc 236  Q
    |||| || ||||| |||||||    
T  19929569 gttaggactctttaaattccc 19929549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 21323962 - 21323874
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| || |||||| ||||| || |||||||| |||| |||  ||||||||||| ||||||| ||||||||||||||||||||    
T  21323962 aatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgttacttattttt 21323874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 20829825 - 20829640
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagtt-gacga 118  Q
    |||||||||| ||||||||||||||||| | ||||||  |||| |||| |||||| |||| || |||| |||| || ||||||||||| ||||| |||||    
T  20829825 aatcgtttaccaagtaataaagtgataa-ctgagtattgtatccacaaggattgttgtttcgttcaaaaaatttgcattacttatttt-aagttcgacga 20829728  T
Q  119 tataataaaat-ataagggtta-gagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    || |||||||  |||||||||| |||| || |||||||||||| |||||     ||| |||||||| ||||||||||||||||| ||| ||||    
T  20829727 taaaataaaaagataagggttaagagatttacaatttttatctgtttgcg----acatagcaagtt-acttgtttttggttgcagaaatgtaa 20829640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 25121312 - 25121227
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| ||||||||||||| |||| | |||||| |||| |||| |||||| |||| ||||||| ||||||||||||||||||    
T  25121312 aatcgtttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttacttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 11490555 - 11490631
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||||||||||| |||||||| |||| |||  |||||| ||||  |||||| |||||||||||||||||||    
T  11490555 aagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttacttatttt 11490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 13992959 - 13992879
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttat 104  Q
    |||||| ||||||||||||| |||| |||||||| |||| |||  |||| |||||||||||||| |||||| |||||||||    
T  13992959 gtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaattcgtgttacttat 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 19092318 - 19092448
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aataaa- 127  Q
    |||||||||||||||||| ||||||||  ||  |||  ||||||||||| ||||||| || || |||| |||| |||||||||||||||||  ||||||     
T  19092318 aagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaactcacgttgctta-ttttaagttgacgatattaaataaaa 19092416  T
Q  128 -atataagggttagagagttgcaatttttatct 159  Q
     | ||||| |||||||| |||||||||||||||    
T  19092417 gagataagagttagaga-ttgcaatttttatct 19092448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 13992077 - 13992029
Alignment:
Q  108 taagttgacgatataataaaatataagggttagagagttgcaattttta 156  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  13992077 taagttgacgatataagaaaagataaggtttagagagttgcaattttta 13992029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 19636667 - 19636548
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| ||||||||||||| |||| |||||||  |||||| |  |||||||||||  |||||| |||||  |||||||||||| |  ||||||||| ||||    
T  19636667 ttacaaagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaattcatgttacttattttaagtttgacgataaaata 19636568  T
Q  126 aaata--taagggttagaga 143  Q
    ||| |  |||||||||||||    
T  19636567 aaagagttaagggttagaga 19636548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 8969803 - 8969674
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataat 124  Q
    ||||| ||||||||||||| |||| |||| | | |||||||   ||||||||||| ||||||| |||||| ||||||||||||    |||||||||||||    
T  8969803 tttacaaagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttacttattttgtt-ttgacgatataat 8969706  T
Q  125 aaaatataagggttagagagttgcaatttttatct 159  Q
    |||   ||||||||||||| ||||||||| |||||    
T  8969705 aaa--ttaagggttagaga-ttgcaatttatatct 8969674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 12406654 - 12406575
Alignment:
Q  159 tttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctc 238  Q
    |||||| |||||| ||||| | ||||| ||||||||||||||  |||||||||| |||||| ||||||| |||| |||||    
T  12406654 tttttgtttgcaatagagcgaatttacctgtttttggttgcaggaaagtaaacagcggttaggattcttcgaatcccctc 12406575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 17709769 - 17709951
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||| |||||||  |||| | |  ||||||  |||||||   | ||||| |||||||||||||  ||| ||||||    
T  17709769 aatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgttcttttgtc---acaattctcgttacttatttttataatttgacg 17709865  T
Q  118 atataataaaatataagggtt--agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||   |||||| |||||||||  | ||| ||| ||||||||    | || |||||||||||||||||||| || ||||||||||| ||||||||    
T  17709866 at---ataaaagataagggttaaaaagacttgaaattttta----tatgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaagtaa 17709951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 15047140 - 15047199
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||||||| |||||||||||||||||| |||| ||| ||||||||  |||| ||||||    
T  15047140 aatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgttt 15047199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 15107284 - 15107225
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||||||| |||||||||||||||||| |||| ||| ||||||||  |||| ||||||    
T  15107284 aatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgttt 15107225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 17026288 - 17026217
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    ||||||||||| || ||||| |||||||||||||| | |||||| || |||||| ||||||| |||| ||||    
T  17026288 ttgcaacagagtaaatttacctgtttttggttgcagacaagtaagcagcggttaggattcttcgaatcccct 17026217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 22176049 - 22175911
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  |||||||||||||||||| |||||||  |||| | |  ||||||| |||| |||||| |||||||| || ||| |||| |||||| |||    
T  22176049 aatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcg-taatta-ttttgagttgatgat 22175952  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttat 157  Q
    ||  ||||||| |  ||||||||||||| |||||||||||||    
T  22175951 ataaaataaaagagttaagggttagaga-ttgcaatttttat 22175911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 11935237 - 11935293
Alignment:
Q  191 tttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatat 247  Q
    |||||||||| |||||||| ||  ||||| ||||||| |||| ||||||||||||||    
T  11935237 tttggttgcagaaaagtaatcagtggttaggattcttcgaatcccctctatttatat 11935293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 13692618 - 13692582
Alignment:
Q  173 agagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  13692618 agagcaagtttacctgtttttggttgcagaaaagtaa 13692582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 248
Target Start/End: Original strand, 40227849 - 40228011
Alignment:
Q  82 tccaaataattcgcgttacttatttttaagttgacgatataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaa 179  Q
    |||||| |||||||||||||||||||||  |||||||||  |||||| |   ||||| |||||  || |||||||||||    || ||||||| ||| ||    
T  40227849 tccaaacaattcgcgttacttatttttagtttgacgataatataaaagagtaaagggctagaggtttacaatttttatc----tgtttgcaacggagtaa 40227944  T
Q  180 gtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    |||||| | ||||| |||||  |||| ||| || |||||| ||||| ||||| |||| |||||||||||    
T  40227945 gtttacctattttttgttgccgaaaaataagcagcggttaggattc-ttgaa-tccccctatttatatt 40228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 168385 - 168177
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||||||||||  || |||||  ||| |||||||||||| |||||||||||    
T  168385 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacag-gattgtcgtttcttctaaatagctcgtgttacttatttt-aagttgacgat 168288  T
Q  120 ataa--taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||  ||||| |  ||||||||||||| || |||||||||||| |||||    ||||||||||||| ||||||||||||||| | ||||| ||||||||    
T  168287 ataaaataaaagacataagggttagagattt-caatttttatctgtttgc----aacagagcaagtt-acttgtttttggttgtagaaaaggaaacaacg 168194  T
Q  216 gttaagattctttgaat 232  Q
    |||| || |||||||||    
T  168193 gttaggactctttgaat 168177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 36082 - 35857
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| |||||||||||||||||||||||| |||||||| |||| |||   ||||||||||  ||||||||||||| |||||||||||| |  ||||||||    
T  36082 aatcatttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttattttaagtttgacgat 35983  T
Q  120 ataataaaa---tataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    | |||| ||   |  |||||||||||| ||||||||||||||| |    ||| |||| || ||| |||| || ||||||||||| |||||||| || |||    
T  35982 aaaatataagagttaaagggttagagatttgcaatttttatctat----ttggaacaaagaaag-ttacctgattttggttgcagaaaagtaagcagcgg 35888  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| ||||||| ||| |||| |||||||||||    
T  35887 ttaggattcttagaa-tccccctatttatatt 35857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 17431895 - 17432119
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agtt--ga 115  Q
    |||||||||| |||||||||||||  ||| |||||||| |||| |||  |||||||||||  |||||| || || || ||||||||||||  ||||  |     
T  17431895 aatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttatttttataagttttgg 17431994  T
Q  116 cgatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||||||   ||||||||||||| ||||||| ||||||    ||| || ||||||||||||||||||||||| ||||||||||| |||||||| || ||    
T  17431995 cgatataa---aatataagggttaaagagttgtaatttt----tttctgtttgcaacagagcaagtttacttg-ttttggttgcagaaaagtaagcagcg 17432086  T
Q  216 gttaagattctttgaattccctctatttatatt 248  Q
    |||| ||||||| |||| |||| | ||||||||    
T  17432087 gttaggattcttcgaataccctatgtttatatt 17432119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 19004313 - 19004168
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||||||||| ||||||||||||||||||  ||||||| |||| |||  ||||||| ||||||||||| ||||| |||||||||||||  |||| |||||    
T  19004313 aatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttatttttgtaagtttgac 19004214  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgc 165  Q
    |||   |||||| |||||||||| | ||||||||||||||||| |||||    
T  19004213 gat---ataaaagataagggttaaatagttgcaatttttatctgtttgc 19004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 24245631 - 24245422
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    ||||| |||| | |||||||||||||||| |||||||| |||| |||| ||||||||||| ||||||| || ||||||||||||||||  ||||||||      
T  24245631 aatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaagttgaga 24245532  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |||||| || ||| |||||||||| | ||| | |||||||    |||| || ||||| ||||||||||| || |||| |||||| |||||||| ||||||    
T  24245531 atataa-aagataaaagggttagaaaggtttcgattttta----tttgtttccaacaaagcaagtttacctg-ttttagttgcagaaaagtaagcaacgg 24245438  T
Q  217 ttaagattctttgaat 232  Q
    ||| ||||||| ||||    
T  24245437 ttaggattcttcgaat 24245422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 25550591 - 25550487
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt-taagttgacga 118  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||  ||||||| ||| ||||||| |||||  |||||||||||| |||||||||||    
T  25550591 aatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaattcttgttacttattttgtaagttgacga 25550492  T
Q  119 tataa 123  Q
    |||||    
T  25550491 tataa 25550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 22755533 - 22755755
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||| ||| |||||| |||||||| |||| | || |||||||||||  |||||| |||| || ||| ||||||| |  || |||||    
T  22755533 aatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaattggcattatttatttt-agttttacgat 22755631  T
Q  120 ataa--taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||  ||||| |  ||||||||||||| || |||||||||||    || ||||||||||||||| ||||| | |||||||| || |||||||| |||||    
T  22755632 ataaaataaaagagttaagggttagagatttacaatttttatc----tgtttgcaacagagcaag-ttactag-ttttggttccaaaaaagtaatcaacg 22755725  T
Q  216 gttaagattctttgaattccctctatttat 245  Q
     ||| ||||||| |||||||| ||||||||    
T  22755726 attatgattcttagaattccccctatttat 22755755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 20315518 - 20315331
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta---agttga 115  Q
    ||||||||||| ||||||||| |||||||| |||||||| |||| |||  |||| || ||| ||||||| ||||||||| |||||||||||   ||||||    
T  20315518 caatcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttatttttattaagttga 20315419  T
Q  116 cgatataataaaatataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||||||||   ||| |||||| || |||   ||||||||||||||| |||||    |||| ||||||||||| || ||||||||||| || |||||    
T  20315418 cgatataa---aatttaagggataaagaaacttgcaatttttatctgtttgc----aacaaagcaagtttacatg-ttttggttgcaaaatagtaa 20315331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 39434473 - 39434563
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    ||||||||||| |||||||||| ||||||| |||  ||| |||| |||  ||||||| ||||||||||| |||||||||||||||||||||    
T  39434473 caatcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttattttta 39434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 164
Target Start/End: Complemental strand, 25402405 - 25402278
Alignment:
Q  39 aagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaata--taaggg 136  Q
    |||||||||| |||||||  |||| |||  ||||||||||| |||| ||| |||||||||||||||||| |  ||||| ||| ||||||| |   |||||    
T  25402405 aagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttacttattttaagtttgacaataaaataaaagagtgaaggg 25402306  T
Q  137 ttagagagttgcaatttttatctttttg 164  Q
    ||||||| ||||||||||||||| ||||    
T  25402305 ttagagatttgcaatttttatctgtttg 25402278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 34487654 - 34487791
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||||| ||||||||||||| |||| ||| ||||||||| |||  ||||||||||| ||| ||| ||||||||||||||| ||||   ||||||||||||    
T  34487654 gtttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttactta-ttttgttttgacgatataa 34487751  T
Q  124 t-----aaaatataagggttagagagttgcaatttttatct 159  Q
    |     |||| |||||||||||||| |||||||||||||||    
T  34487752 taataaaaaagataagggttagaga-ttgcaatttttatct 34487791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 24267041 - 24266955
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||| |||| || ||||||||||| |||||| ||||||||||||    
T  24267041 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttatttt 24266955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 24343672 - 24343586
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||| |||| || ||||||||||| |||||| ||||||||||||    
T  24343672 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttatttt 24343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 15375969 - 15375864
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacg 117  Q
    |||||||||| || ||||||| ||||||| |||||||| |||| |||  ||||||||||| ||||||| |||| || ||||||||||||  |||||||||    
T  15375969 aatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgcattacttatttttgcaagttgacg 15375870  T
Q  118 atataa 123  Q
     |||||    
T  15375869 gtataa 15375864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 24140453 - 24140543
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    ||||||||||| |||||||||||||||||| |||||||  |||| ||   ||||||| ||| ||||||| |||||||||||| ||||||||    
T  24140453 caatcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattttta 24140543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 20744699 - 20744548
Alignment:
Q  76 gttttgtccaaataattcgcgttacttattttt--aagtt-gacgatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaac 172  Q
    |||| ||||||| | ||| ||||||||||||||  ||||| ||||||||||   ||  ||||||||||||||||||||||||||||    || |||||||    
T  20744699 gtttcgtccaaacatttcacgttacttatttttgtaagtttgacgatataa---aagttaagggttagagagttgcaatttttatc----tgtttgcaac 20744607  T
Q  173 agagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    | ||||||||||| || ||||||||| | |||||||| || |||||| ||||||| ||||    
T  20744606 atagcaagtttacctg-ttttggttgtagaaaagtaagcagcggttaggattcttcgaat 20744548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 15690790 - 15690928
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| || ||||||||||||||| |||||||| |||| || |  |||||||||| ||||||  ||||| |||||||||||||| ||||||| |     
T  15690790 aatcgtttaccaa-taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttacttattttt-agttgacaaa 15690887  T
Q  120 ataataaaa---tataagggttagagagttgcaatttttat 157  Q
      |||||||   |  |||||||||||| |||||||||||||    
T  15690888 taaataaaagagttaaagggttagagatttgcaatttttat 15690928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 20564056 - 20563993
Alignment:
Q  142 gagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||||||||||||||| |||||    |||||||||| |||||||||||||||||||| ||||||||    
T  20564056 gagttgcaatttttatctgtttgc----aacagagcaaatttacttgtttttggttgcagaaaagtaa 20563993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 34128647 - 34128856
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgac 116  Q
    |||||||| || |||||||||||||||||| ||| |||| |||| |||   |||||| ||| ||||||| ||||| |||| ||||||||  ||||||||     
T  34128647 caatcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaattctcgtttcttatttttataagttgaa 34128746  T
Q  117 gatataataaaatataagggtt--agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    | |   ||||||  ||||||||  | ||| ||| |||||| |     ||| |||||| ||||||||||||| || ||||||||||| |||||||| ||||    
T  34128747 ggt---ataaaagttaagggttaaaaagacttgaaattttga----cttgtttgcaatagagcaagtttacctg-ttttggttgcagaaaagtaagcaac 34128838  T
Q  215 ggttaagattctttgaat 232  Q
    ||||| ||||||| ||||    
T  34128839 ggttaggattcttcgaat 34128856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 18208335 - 18208249
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||  ||||||| ||| ||||||| |||||  ||||||||||||    
T  18208335 aatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaattcatgttacttatttt 18208249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 19283942 - 19283840
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| || ||||||||||||||| |||||||  |||| ||||  |||  ||||| ||||||| |||| || | ||||| |||||||||||||||    
T  19283942 aatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaatttgcttaactta-ttttaagttgacgat 19283844  T
Q  120 ataa 123  Q
    ||||    
T  19283843 ataa 19283840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 15375839 - 15375773
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||||||||||||||||  | | |||||||||||||||||||||  |||||||| ||||||| ||||    
T  15375839 ttgcaacagagcaagttcgcctatttttggttgcataaaagtaagtaacggttaggattcttcgaat 15375773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 17185475 - 17185561
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||| ||||| || ||||||||||||||| |||||||| ||||||||  |||||||||||   ||||| ||||| |||||| |||||    
T  17185475 aatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgttacgtattt 17185561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 16523766 - 16523672
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctat 241  Q
    ||||||||||||||||| |||||    |||||||| | ||||| ||||||| |||  | |||||||| || |||||| |||||||||||| ||||||||    
T  16523766 agttgcaatttttatctgtttgc----aacagagcgaatttacctgttttttgttatagaaaagtaagcagcggttaggattctttgaatcccctctat 16523672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 17315033 - 17314984
Alignment:
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||| |||||||| || ||||||||||||||||||| ||||||    
T  17315033 ttttggttgcaaaaaagtaagcagcggttaagattctttgaatcccctct 17314984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 19086266 - 19086181
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatt 105  Q
    |||||||||| |||||||||||||||||| ||||||| ||||| |||   ||||| |||||||| ||  |||||  ||||||||||    
T  19086266 aatcgtttaccaagtaataaagtgataagtagagtattatatccacatgaattgttgttttgtcaaatcaattcatgttacttatt 19086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 23388914 - 23388837
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| |||| || |||||  |||||||||||||    
T  23388914 aagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattttt 23388837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 28664917 - 28664989
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||| | ||||| |||||| ||||||| |||| ||| ||||||||||||||||| |||| ||||||    
T  28664917 ttgcaacagagcgaatttacctgtttt-ggttgcagaaaaataagcaacggttaagattcttcgaatcccctct 28664989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 17171629 - 17171553
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||||||||||| |||| ||| |||| |||  ||||||||||| ||| ||  ||||||||||| |||||||    
T  17171629 aagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgttaattatttt 17171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 24167671 - 24167612
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||||||| ||||||||||||  |||| |||||||||||| ||||  |||||||||||    
T  24167671 aatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgttt 24167612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 24852259 - 24852173
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||| |||| |||||||||| ||||||| | |||||| |||| |||  |||||| |||| ||| ||| ||||| ||||||||||||    
T  24852259 aatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaattcacgttacttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 20858708 - 20858785
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| ||||||| |||||||| |||| ||   ||||||| |||||||| || |||||  |||||||||||||    
T  20858708 aagtaataaaatgataagtagagtatcgtatccacggagattgtccttttgtccgaacaattcttgttacttattttt 20858785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 24140596 - 24140651
Alignment:
Q  171 acagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctt 227  Q
    ||||||||||||||| | |||| ||||||| |||||||| ||||||||| |||||||    
T  24140596 acagagcaagtttacctatttt-ggttgcagaaaagtaagcaacggttaggattctt 24140651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 24260560 - 24260616
Alignment:
Q  52 agtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||| |||| |||| ||||||| ||| ||||||| ||| ||||||||||||||||    
T  24260560 agtatcgtatccacaaggattgtcatttcgtccaaaaaatccgcgttacttattttt 24260616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 26120881 - 26120964
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||| | ||||||||||  |||| ||||||||||||  | || ||||||||||| ||||||| |||| || ||||||||||||    
T  26120881 gtttaccatgtaataaagtt-taagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattacttattttt 26120964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 36175146 - 36175233
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| ||||||||||||| |  | |||||||| |||| | || ||||||||||| ||||||| ||   |||||||||||||||    
T  36175146 aatcgtttaccaagtaataaagtgttt-gtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttacttattttt 36175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 248
Target Start/End: Complemental strand, 904 - 684
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agtt-gacgatata 122  Q
    |||| |||||||||||||||||| |||||||| |||| |    ||||||||||| ||||||| ||| | |||||||||||||||  |||| |||||||||    
T  904 ttaccaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttatttttataagtttgacgatata 805  T
Q  123 ataaaatataagggtt-agagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
    |   || ||||||||| ||| || ||||||||||||||| |||||    ||||||| |||||||| |||||||||||||| ||||||||  | |||||||    
T  804 a---aagataagggtttagaaagattgcaatttttatctgtttgc----aacagagaaagtttacctgtttttggttgcagaaaagtaagaagcggttaa 712  T
Q  221 gattctttgaattccctctatttatatt 248  Q
    ||||||| |||  |||||| ||||||||    
T  711 gattcttcgaaccccctctgtttatatt 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 69925 - 70128
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||| ||||| |||||||||||||| ||| | |||||| |||  |||| ||||||||||| ||||||| ||||| |||||||||||||  || ||||| |    
T  69925 aatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatttttgtatgttgatg 70024  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||   |||||| |||| ||||||| | |||||||||||||    |||| |||||| ||||||||||||| |||||||||||| | |||||||| || | |    
T  70025 at---ataaaagataaaggttagaaaggttgcaattttta----tttgtttgcaatagagcaagtttacctgtttttggttgtagaaaagtaagcagcag 70117  T
Q  217 ttaagattctt 227  Q
    ||| |||||||    
T  70118 ttaggattctt 70128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 69099 - 69323
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| ||||||||||||||||||  ||| ||| |||| |||| |||||||  ||| |||||| |||| || || |||||||||| |||||| ||||||||    
T  69099 ttaccaagtaataaagtgataagttgagaatcgtatccacaaggattgtcactttctccaaacaatttgcattgcttattttta-gttgacaatataata 69197  T
Q  126 aaata-taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagatt 224  Q
    ||  | ||||||||| ||| ||||||||||||||| |||||    ||||||| |||||||| |||| ||   |||| |||| ||| || |||||| ||||    
T  69198 aacgagtaagggttatagaattgcaatttttatctgtttgc----aacagagaaagtttacctgttcttacatgcagaaaaataagcagcggttaggatt 69293  T
Q  225 ctttgaattccctctatttatattcttcga 254  Q
    ||| |||||| | ||||||||||| |||||    
T  69294 cttagaattcacactatttatattattcga 69323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 54872 - 55097
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgtttt-gtccaaataattcgcgttacttatttttaagttgacga 118  Q
    |||||||||| |||||||||||||||||| |||||||  |||| |||  |||||||||||| ||| |||||  | |||||||||| ||||||||| ||||    
T  54872 aatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagcttgcgttactta-ttttaagttaacga 54970  T
Q  119 tata----ataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    ||||    | |||| |||||||||||||| || |||||||||    |||| |||| ||| |||||| |||| |||||||||||||| ||||| |||||      
T  54971 tataaaataaaaaagataagggttagaga-ttccaattttta----tttgtttgcgacatagcaag-ttacctgtttttggttgcacaaaagaaaacact 55064  T
Q  215 ggttaagattctttgaattccctctatttatatt 248  Q
    ||||| || |||||||| |||| |||||||||||    
T  55065 ggttaggactctttgaa-tccccctatttatatt 55097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 48277 - 48233
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatcta 64  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||    
T  48277 aatcgtttaccaagtaataaagtgataagtagagtatcgtatcta 48233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 39601 - 39818
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataat-tcgcgttacttatttttaagttgacgatataa 123  Q
    ||||| |||||||||||||||||| |||| ||| |||| ||| ||||||| |||||||||||| ||  || | ||||||||||| |||||||||||||||    
T  39601 tttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaaactcactttacttatttt-aagttgacgatataa 39699  T
Q  124 --taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
      ||||| |  ||||  ||||||| ||||||||||||||| |||||    ||||||||||||| || |||||| ||||||| |||||||| || ||||||    
T  39700 aataaaagagataagaattagaga-ttgcaatttttatctgtttgc----aacagagcaagtt-acctgtttt-ggttgcagaaaagtaagcagcggtta 39792  T
Q  220 agattctttgaattccctctatttat 245  Q
     || ||||||||| ||| ||||||||    
T  39793 tgactctttgaatcccccctatttat 39818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 232
Target Start/End: Complemental strand, 43303 - 43105
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aataaa- 127  Q
    |||||||||||||||||| | |||| | |||| |||| ||||||||||| ||| ||| |  ||| |||||||| |||||| ||||||||||  ||||||     
T  43303 aagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttactta-ttttaaattgacgatataaaataaaa 43205  T
Q  128 -atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattct 226  Q
     | |||||||||||||| ||||||||||||||    || ||||||||||||||| |||| ||||||||||| || ||||  ||| | ||||||||| |||    
T  43204 gagataagggttagaga-ttgcaatttttatc----tgtttgcaacagagcaag-ttacctgtttttggttacagaaaacaaaatagcggttaagactct 43111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 35549 - 35771
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  |||||||||||||||||  |||||||  |||| |||  |||| |||||| ||||||| ||||||| ||||||||||| |  |||| |||    
T  35549 aatcgtttatcaagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttattttaagtttgatgat 35648  T
Q  120 ataataaaa---tataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    | |||||||   |  |||||||||||| ||||||||||||    ||||  ||||||| |||||| |||| || ||||||||||| ||| |||| || |||    
T  35649 aaaataaaagagttaaagggttagagatttgcaattttta----tttgtctgcaacaaagcaag-ttacctg-ttttggttgcagaaaggtaagcagcgg 35742  T
Q  217 ttaagattctttgaattccctctatttat 245  Q
    |||||||||||  ||| |||| |||||||    
T  35743 ttaagattcttcaaatcccctatatttat 35771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 740 - 843
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcg-cgttacttatttttaagttgacga 118  Q
    |||||||||| |||||||||||||||||| |||||||  |||| |||| ||||||||||| ||||||| ||| || ||||||||| ||||||||||| ||    
T  740 aatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttactta-ttttaagttgaaga 838  T
Q  119 tataa 123  Q
    |||||    
T  839 tataa 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 89940 - 89854
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||  |||||||||| ||| ||| || ||||||||||||||||    
T  89940 aatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttcgtctaaacaactcgcgttacttatttt 89854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 3749 - 3850
Alignment:
Q  122 aataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaag 221  Q
    |||||||||||||||||||||||||||||||||||||    |||| |||||| || |||||||| | |||||| ||||| |||||||| |  |||||| |    
T  3749 aataaaatataagggttagagagttgcaatttttatc----tgctcgcaacatagaaagtttacctatttttgtttgcagaaaagtaagctgcggttagg 3844  T
Q  222 attctt 227  Q
    ||||||    
T  3845 attctt 3850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 475 - 317
Alignment:
Q  21 atcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatt--tttaagttgacga 118  Q
    ||||||||| |||||||||||||||| | |||||||| |||| |||  ||||||| ||| ||||||| ||||| |||||  ||||  | |||||||||||    
T  475 atcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaattctcgttagatatttatataagttgacga 376  T
Q  119 tataataaaatataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagt 181  Q
    ||||| || ||| |||||||||| ||  ||||||||||||||    ||||||||| |||||||||    
T  375 tataa-aagata-aagggttagaaagtcttgcaatttttatc----tgcttgcaatagagcaagt 317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 6299 - 6385
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||| ||||| | |||||| |||| |||  |||||| |||| ||||||| ||||||| ||||||||||    
T  6299 aatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattacttattt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 21287 - 21376
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||| || |||||||||||||||||| ||||||||||||| |||  ||||||| ||| |||| || |||||  ||||| |||||||    
T  21287 caatcgttaacaaagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaattcttgttacatattttt 21376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 25130 - 25190
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctt 227  Q
    |||||||||||||||||||| |||||| ||||||| |||||||| ||||||||| |||||||    
T  25130 ttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattctt 25190  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 181786 - 181706
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||| |||||||||||||||||   ||||||| |||| |||  |||||||||||||||||||||| ||| ||||||||||||    
T  181786 ttaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttttgtccaaataagtcgtgttacttatttt 181706  T

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Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 11266 - 11338
Alignment:
Q  34 taataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||||||||| |||||||||||||||||  |||||| ||||   ||||| |||| || ||||||||||    
T  11266 taataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcattacttattt 11338  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 3554 - 3631
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| |||| || |||||  |||||||||||||    
T  3554 aagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattttt 3631  T

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Target: scaffold0671 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 567 - 658
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||||||||| |||||    |||||||| | ||||| |||||| ||||||| |||||||| || |||||| ||||||| |||| ||||||    
T  567 agttgcaatttttatctgtttgc----aacagagcgaatttacctgtttt-ggttgcagaaaagtaagcagcggttaggattcttcgaatcccctct 658  T

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Target: scaffold0653 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 4570 - 4484
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||| ||| || ||||||||||||| |||| |||  ||||||| ||| ||  ||| |||||| |||||||||||    
T  4570 aatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttacttattt 4484  T

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Target: scaffold0386 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 6069 - 5978
Alignment:
Q  142 gagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    |||||||||||||||||| |||||    || ||||| | |||||||||||||||||| | ||||||||  |||||| | ||||||| |||| ||||    
T  6069 gagttgcaatttttatctgtttgc----aatagagcgaatttacttgtttttggttgtagaaaagtaagtaacggtcaggattcttcgaatcccct 5978  T

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Target: scaffold0351 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 5692 - 5642
Alignment:
Q  182 ttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||| |||||||||||| | ||||| |||||||||||| ||||||||||||    
T  5692 ttacctgtttttggttgtagaaaaggaaacaacggttaggattctttgaat 5642  T

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Target: scaffold0351; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 196 - 152
Alignment:
Q  188 gtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    ||||||||||||| ||||| |||||||||||| || |||||||||    
T  196 gtttttggttgcagaaaaggaaacaacggttaggactctttgaat 152  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 662 - 592
Alignment:
Q  36 ataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||| ||| |||||||  |||| ||| ||||| | |||||||| ||||||||| ||||||||||||    
T  662 ataaagtgaaaagtagagtattgtatccacattgattctagttttgtctaaataattcacgttacttattt 592  T

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Target: scaffold0090 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 7499 - 7425
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcg 94  Q
    |||||||||  |||||||||||||||||| |||||||  ||| |||||  |||||||||| ||| ||| ||||||    
T  7499 aatcgtttatcaagtaataaagtgataagtagagtattgtatttacaagaattgtcgtttggtctaaacaattcg 7425  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 72165 - 72247
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    |||||||||||||||||||| | ||||| |||||| |||||||| ||   || | ||||||| |||| |||||| ||||||||    
T  72165 ttgcaacagagcaagtttacgtatttttagttgcagaaaagtaagcagtagtaaggattcttcgaatcccctctgtttatatt 72247  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 114659 - 114709
Alignment:
Q  182 ttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||| |||||||||||||| ||||| |||||||||||| || |||||||||    
T  114659 ttacctgtttttggttgcagaaaaggaaacaacggttaggactctttgaat 114709  T

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