View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16697_high_46 (Length: 208)
Name: NF16697_high_46
Description: NF16697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16697_high_46 |
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Alignment Details
Target: chr6 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 193
Target Start/End: Original strand, 3995091 - 3995266
Alignment:
| Q |
18 |
aaaacagaacacaacgtaacaaaactcaacctaaacccacacccaaaaaccatttctttcaaaagcaaaaacgcttcctttgtaaacccattcccaacat |
117 |
Q |
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| T |
3995091 |
aaaacagaacacaacgtaacaaaactcaacctaaacccacacccaaaaaccatttctttcaaaagcaaaaacgcttcctttgtaaacccattcccaacat |
3995190 |
T |
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| Q |
118 |
aaccaacgatcataacagtccaagcaacctcgttcctctccggcatttcatcaaacaacactctcccactctccac |
193 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3995191 |
aaccaacaatcataacagtccaagcaacctcgttcctctccggcatttcatcaaacaacactctcccactctccac |
3995266 |
T |
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