View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16697_low_11 (Length: 450)
Name: NF16697_low_11
Description: NF16697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16697_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 1 - 435
Target Start/End: Complemental strand, 43206069 - 43205631
Alignment:
| Q |
1 |
gttctcaattccaaagcaagtgaagagtctttggtaattattttctttcttttgagttataaagtattgatcaaata----gtatcatttttattttctt |
96 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
43206069 |
gttctcaattccaaagcaagtgaagagtctttggtaagtattttctttcttttgagttataaagtattgatcaaatatatagtatcatttttattttctt |
43205970 |
T |
|
| Q |
97 |
gattgaacttatgattttcacatcttcctcaggcaaattttgcaaggtgggaaccaggtcatggtggttttagccttcgtcatccttggaaggaatactt |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43205969 |
gattgaacttatgattttcacatcttcctcaggcaaattttgcaaggtgggaaccaggtcatggtggttttagccttcgtcatccttggaaggaatactt |
43205870 |
T |
|
| Q |
197 |
gaaaatcggagtacttgctcgcgaatgtgcatacaagattgaaaccctaaacacataccttaaccctgaaatccaagtaatacatcaatctttcttttct |
296 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43205869 |
gaaaatcggagtacttgctcgcgaatgtggatacaagattgaaaccctaaacacataccttaaccctgaaatccaagtaatacatcaatctttcttttct |
43205770 |
T |
|
| Q |
297 |
acctcaaaaatatcaaatatactctattcggtctcaaatatcaaaacaaaaatctatgtattatatttgaatttaaatttaatgcatgtctattttatga |
396 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43205769 |
acctcaaaaatatcaaatatactctattcggtctcaaatatcaaaacaaaaatctatgtattatatttgaatttaaatttaatgcatgtctattttatga |
43205670 |
T |
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| Q |
397 |
agagaattttgaagctgatatatgcattttggttactgc |
435 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
43205669 |
agagaattttgaagctgatatatgcattttggttactgc |
43205631 |
T |
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