View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16697_low_16 (Length: 376)
Name: NF16697_low_16
Description: NF16697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16697_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 14 - 343
Target Start/End: Original strand, 26755119 - 26755448
Alignment:
| Q |
14 |
tgagaagaacgtgaaggtagatctatctctatttgacaaacttgttggtccacctcactcggcctccatcgcagtcacatgctggtgtcgacaaacttgt |
113 |
Q |
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| T |
26755119 |
tgagaagaacgtgaaggtagatctatctctatttgacaaacttgttggtccacctcactcggcctccatcgcagtcacatgctggtgtcgacaaacttgt |
26755218 |
T |
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| Q |
114 |
tcactgttcttatgcctcatttaggcttaagctaactataaattggaacctatggtgaaattctgagtactaatgcttatattggttcctccacttgcaa |
213 |
Q |
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| T |
26755219 |
tcactgttcttatgcctcatttaggcgtaagctaactataaattggaacctatggtgaaattctgagtactaatgcttatattggttcctccacttgcaa |
26755318 |
T |
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| Q |
214 |
tttttgtatacaatttgagttttgcaatacaactttagttcagtatttaaagatgttataacaacatagtaatttattctcatcagatttacaattttga |
313 |
Q |
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| T |
26755319 |
tttttgtatacaatttgagttttgcaatacaactttagttcagtatttaaagatgttataacaacatagtaatttattctcatcagatttacaattttga |
26755418 |
T |
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| Q |
314 |
tatccaatagctcttgatctatttttagat |
343 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
26755419 |
tatccaatagctcttgatctatttttagat |
26755448 |
T |
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