View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16697_low_29 (Length: 265)

Name: NF16697_low_29
Description: NF16697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16697_low_29
NF16697_low_29
[»] chr1 (40 HSPs)
chr1 (20-248)||(31235911-31236135)
chr1 (20-248)||(17359174-17359398)
chr1 (20-248)||(12208613-12208838)
chr1 (22-225)||(25405516-25405715)
chr1 (45-248)||(9401542-9401742)
chr1 (20-232)||(15543845-15544053)
chr1 (20-248)||(17610118-17610343)
chr1 (24-159)||(13345282-13345419)
chr1 (20-225)||(16179019-16179220)
chr1 (24-106)||(17837533-17837615)
chr1 (20-209)||(14779577-14779763)
chr1 (22-123)||(21666590-21666693)
chr1 (20-123)||(24281289-24281391)
chr1 (31-123)||(29242542-29242636)
chr1 (20-245)||(33190689-33190909)
chr1 (20-106)||(3591654-3591740)
chr1 (166-239)||(21987865-21987938)
chr1 (20-232)||(22664218-22664427)
chr1 (33-165)||(51473816-51473950)
chr1 (20-108)||(16787725-16787813)
chr1 (20-108)||(21449101-21449189)
chr1 (22-106)||(24306307-24306390)
chr1 (19-109)||(22622901-22622991)
chr1 (20-106)||(34480981-34481067)
chr1 (20-108)||(18736239-18736327)
chr1 (20-128)||(23037991-23038098)
chr1 (143-239)||(16916817-16916909)
chr1 (31-123)||(147654-147745)
chr1 (163-239)||(16069433-16069508)
chr1 (20-104)||(21847646-21847729)
chr1 (20-108)||(21987981-21988069)
chr1 (166-241)||(14781735-14781810)
chr1 (20-157)||(15813104-15813241)
chr1 (31-110)||(22620285-22620364)
chr1 (166-241)||(22623046-22623120)
chr1 (144-232)||(29242644-29242727)
chr1 (166-228)||(25403973-25404035)
chr1 (166-239)||(18736123-18736196)
chr1 (20-104)||(12012803-12012887)
chr1 (20-56)||(27117769-27117805)
[»] chr2 (38 HSPs)
chr2 (20-245)||(29719097-29719318)
chr2 (20-248)||(15339250-15339475)
chr2 (20-248)||(17349369-17349585)
chr2 (24-218)||(31804791-31804983)
chr2 (26-218)||(25618574-25618762)
chr2 (20-232)||(17743355-17743563)
chr2 (20-248)||(27908981-27909206)
chr2 (20-227)||(11382636-11382840)
chr2 (20-248)||(17675491-17675717)
chr2 (20-248)||(17635637-17635862)
chr2 (20-165)||(20174575-20174722)
chr2 (20-108)||(45621880-45621968)
chr2 (24-245)||(32085479-32085695)
chr2 (20-219)||(13776351-13776545)
chr2 (19-122)||(25196021-25196127)
chr2 (20-165)||(29027508-29027655)
chr2 (132-248)||(25887766-25887877)
chr2 (26-237)||(28925539-28925747)
chr2 (143-239)||(29143086-29143177)
chr2 (144-224)||(30411804-30411880)
chr2 (166-227)||(12953227-12953288)
chr2 (20-108)||(30411690-30411778)
chr2 (20-107)||(25885460-25885546)
chr2 (24-116)||(25888216-25888303)
chr2 (144-248)||(26603223-26603321)
chr2 (31-113)||(12953288-12953370)
chr2 (20-106)||(45553142-45553228)
chr2 (31-108)||(25535297-25535374)
chr2 (26-109)||(9774333-9774414)
chr2 (31-107)||(27418389-27418465)
chr2 (189-239)||(17198034-17198084)
chr2 (181-239)||(26667464-26667522)
chr2 (25-106)||(23011764-23011844)
chr2 (31-108)||(24090925-24091002)
chr2 (166-239)||(25196166-25196238)
chr2 (31-108)||(25530470-25530547)
chr2 (143-237)||(25920389-25920479)
chr2 (166-242)||(17890093-17890167)
[»] chr6 (40 HSPs)
chr6 (20-232)||(27737567-27737776)
chr6 (24-200)||(22410238-22410410)
chr6 (20-224)||(23844351-23844552)
chr6 (20-159)||(23143734-23143874)
chr6 (81-248)||(14079320-14079483)
chr6 (22-237)||(17826969-17827177)
chr6 (34-232)||(28933539-28933733)
chr6 (20-141)||(9516797-9516919)
chr6 (20-237)||(27124368-27124579)
chr6 (20-237)||(21907444-21907660)
chr6 (20-257)||(12183185-12183418)
chr6 (20-165)||(21679790-21679938)
chr6 (20-106)||(9726034-9726120)
chr6 (19-244)||(11176961-11177183)
chr6 (20-100)||(17729164-17729244)
chr6 (20-165)||(21672374-21672522)
chr6 (20-245)||(23645633-23645854)
chr6 (34-107)||(4339761-4339834)
chr6 (23-108)||(23231982-23232067)
chr6 (20-232)||(5624652-5624861)
chr6 (20-87)||(20005899-20005966)
chr6 (94-248)||(6630554-6630705)
chr6 (24-128)||(18075367-18075471)
chr6 (25-106)||(22566163-22566244)
chr6 (131-239)||(20005789-20005894)
chr6 (19-107)||(21688795-21688883)
chr6 (20-106)||(17299832-17299918)
chr6 (74-157)||(20002338-20002423)
chr6 (22-103)||(24251530-24251611)
chr6 (20-165)||(8241289-8241434)
chr6 (169-248)||(14637026-14637104)
chr6 (21-87)||(19244598-19244664)
chr6 (23-105)||(25927305-25927387)
chr6 (32-107)||(9838380-9838455)
chr6 (190-233)||(18075288-18075331)
chr6 (144-248)||(25781915-25782014)
chr6 (20-79)||(28586058-28586117)
chr6 (31-108)||(22413048-22413125)
chr6 (20-80)||(17382157-17382217)
chr6 (166-218)||(17382224-17382275)
[»] chr8 (33 HSPs)
chr8 (25-237)||(13314865-13315074)
chr8 (20-229)||(18448423-18448629)
chr8 (24-248)||(24114146-24114365)
chr8 (20-227)||(29382244-29382448)
chr8 (96-157)||(14626118-14626179)
chr8 (20-165)||(14528161-14528308)
chr8 (31-123)||(27659468-27659562)
chr8 (32-164)||(6884982-6885115)
chr8 (19-209)||(17509257-17509442)
chr8 (20-236)||(19786743-19786956)
chr8 (20-165)||(34497127-34497275)
chr8 (25-232)||(25182306-25182510)
chr8 (20-106)||(24904645-24904731)
chr8 (20-159)||(30806438-30806584)
chr8 (25-248)||(24269615-24269833)
chr8 (31-106)||(30122156-30122230)
chr8 (20-106)||(5850953-5851039)
chr8 (26-254)||(21314641-21314865)
chr8 (166-248)||(26394562-26394642)
chr8 (31-107)||(2637621-2637697)
chr8 (50-165)||(13697897-13698014)
chr8 (20-123)||(17101875-17101980)
chr8 (20-106)||(44011025-44011110)
chr8 (31-108)||(23893200-23893277)
chr8 (25-106)||(24644855-24644935)
chr8 (96-128)||(26394661-26394693)
chr8 (20-76)||(30783772-30783828)
chr8 (166-209)||(17101806-17101849)
chr8 (31-106)||(17976642-17976717)
chr8 (20-87)||(24110675-24110742)
chr8 (166-232)||(18569210-18569275)
chr8 (24-105)||(15238815-15238896)
chr8 (20-109)||(25226148-25226237)
[»] chr3 (39 HSPs)
chr3 (20-232)||(21301930-21302140)
chr3 (26-254)||(17438287-17438512)
chr3 (22-248)||(16245593-16245814)
chr3 (20-232)||(41508379-41508587)
chr3 (54-154)||(7478288-7478388)
chr3 (24-209)||(20429726-20429908)
chr3 (24-209)||(3116321-3116501)
chr3 (20-245)||(21303220-21303441)
chr3 (17-239)||(932751-932970)
chr3 (20-165)||(12805830-12805977)
chr3 (19-237)||(4650242-4650451)
chr3 (31-227)||(19925505-19925699)
chr3 (24-123)||(19171816-19171917)
chr3 (31-209)||(5508359-5508532)
chr3 (26-165)||(2167557-2167698)
chr3 (73-154)||(7495048-7495129)
chr3 (24-165)||(21325356-21325500)
chr3 (20-108)||(22349421-22349509)
chr3 (161-237)||(12754796-12754872)
chr3 (143-232)||(16229832-16229917)
chr3 (166-237)||(8765261-8765331)
chr3 (31-102)||(28728967-28729038)
chr3 (20-106)||(821515-821601)
chr3 (20-62)||(6289915-6289957)
chr3 (26-108)||(12411169-12411251)
chr3 (19-108)||(8770030-8770119)
chr3 (166-239)||(8770163-8770235)
chr3 (19-123)||(8319050-8319153)
chr3 (20-232)||(19908319-19908528)
chr3 (24-79)||(12759403-12759458)
chr3 (20-107)||(18736672-18736758)
chr3 (32-106)||(8557130-8557204)
chr3 (20-106)||(10917930-10918016)
chr3 (20-106)||(21825870-21825955)
chr3 (169-227)||(27413780-27413838)
chr3 (166-239)||(8170026-8170099)
chr3 (31-108)||(8889151-8889228)
chr3 (20-57)||(10744914-10744951)
chr3 (181-237)||(19909846-19909902)
[»] chr7 (60 HSPs)
chr7 (20-248)||(16365717-16365942)
chr7 (25-248)||(5108583-5108801)
chr7 (25-225)||(3329542-3329740)
chr7 (20-209)||(2563830-2564016)
chr7 (21-245)||(7318286-7318507)
chr7 (20-248)||(15869607-15869831)
chr7 (20-248)||(8978868-8979093)
chr7 (24-248)||(39273038-39273258)
chr7 (20-128)||(12329694-12329802)
chr7 (32-209)||(7492164-7492338)
chr7 (20-219)||(9731518-9731714)
chr7 (26-248)||(4785854-4786077)
chr7 (31-232)||(1848106-1848303)
chr7 (20-237)||(10586897-10587111)
chr7 (25-245)||(3734613-3734829)
chr7 (20-108)||(13759859-13759947)
chr7 (24-232)||(17153032-17153237)
chr7 (24-106)||(9864327-9864409)
chr7 (20-209)||(19153310-19153493)
chr7 (20-209)||(20752709-20752892)
chr7 (20-159)||(2350692-2350834)
chr7 (20-182)||(1587693-1587854)
chr7 (20-247)||(8053926-8054145)
chr7 (20-106)||(18662453-18662539)
chr7 (26-123)||(4818854-4818950)
chr7 (31-108)||(11803103-11803180)
chr7 (20-123)||(9574419-9574521)
chr7 (20-107)||(31492942-31493029)
chr7 (20-106)||(4579110-4579195)
chr7 (20-123)||(8054471-8054576)
chr7 (24-232)||(18368857-18369063)
chr7 (19-128)||(1584555-1584662)
chr7 (20-108)||(11221163-11221251)
chr7 (20-123)||(3191044-3191146)
chr7 (20-164)||(4986567-4986713)
chr7 (20-164)||(4990665-4990811)
chr7 (20-237)||(6042473-6042676)
chr7 (20-156)||(12181620-12181759)
chr7 (166-239)||(16058904-16058977)
chr7 (20-232)||(20582271-20582476)
chr7 (20-93)||(23099966-23100039)
chr7 (31-247)||(8877444-8877657)
chr7 (187-242)||(7397317-7397372)
chr7 (20-107)||(10648590-10648677)
chr7 (20-106)||(10584487-10584573)
chr7 (134-232)||(9131038-9131131)
chr7 (144-246)||(13418659-13418756)
chr7 (39-245)||(6013624-6013825)
chr7 (20-79)||(10937614-10937673)
chr7 (31-106)||(16306717-16306792)
chr7 (20-106)||(9245193-9245279)
chr7 (20-66)||(21227191-21227237)
chr7 (31-108)||(4449003-4449080)
chr7 (190-239)||(4449146-4449195)
chr7 (166-239)||(11803224-11803296)
chr7 (31-108)||(17203047-17203123)
chr7 (26-79)||(21102321-21102374)
chr7 (37-106)||(22339312-22339381)
chr7 (190-242)||(10584349-10584401)
chr7 (19-123)||(13418544-13418651)
[»] chr4 (36 HSPs)
chr4 (20-219)||(17216829-17217027)
chr4 (20-232)||(13908866-13909075)
chr4 (20-209)||(13128774-13128961)
chr4 (32-248)||(17336997-17337210)
chr4 (20-232)||(14648907-14649115)
chr4 (20-209)||(15164779-15164963)
chr4 (20-248)||(7582309-7582534)
chr4 (26-248)||(24639324-24639535)
chr4 (20-239)||(19562046-19562265)
chr4 (20-108)||(13692668-13692756)
chr4 (20-194)||(16730316-16730486)
chr4 (20-106)||(20315012-20315098)
chr4 (20-248)||(19492574-19492787)
chr4 (20-123)||(12578251-12578353)
chr4 (20-182)||(17672014-17672174)
chr4 (20-164)||(5679217-5679363)
chr4 (20-106)||(19882652-19882738)
chr4 (20-236)||(19929549-19929762)
chr4 (20-108)||(21323874-21323962)
chr4 (20-209)||(20829640-20829825)
chr4 (20-106)||(25121227-25121312)
chr4 (31-107)||(11490555-11490631)
chr4 (24-104)||(13992879-13992959)
chr4 (31-159)||(19092318-19092448)
chr4 (108-156)||(13992029-13992077)
chr4 (26-143)||(19636548-19636667)
chr4 (25-159)||(8969674-8969803)
chr4 (159-238)||(12406575-12406654)
chr4 (20-209)||(17709769-17709951)
chr4 (20-79)||(15047140-15047199)
chr4 (20-79)||(15107225-15107284)
chr4 (166-237)||(17026217-17026288)
chr4 (20-157)||(22175911-22176049)
chr4 (191-247)||(11935237-11935293)
chr4 (173-209)||(13692582-13692618)
chr4 (82-248)||(40227849-40228011)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-232)||(168177-168385)
[»] scaffold0155 (1 HSPs)
scaffold0155 (20-248)||(35857-36082)
[»] chr5 (34 HSPs)
chr5 (20-248)||(17431895-17432119)
chr5 (20-165)||(19004168-19004313)
chr5 (20-232)||(24245422-24245631)
chr5 (20-123)||(25550487-25550591)
chr5 (20-245)||(22755533-22755755)
chr5 (19-209)||(20315331-20315518)
chr5 (19-109)||(39434473-39434563)
chr5 (39-164)||(25402278-25402405)
chr5 (24-159)||(34487654-34487791)
chr5 (20-107)||(24266955-24267041)
chr5 (20-107)||(24343586-24343672)
chr5 (20-123)||(15375864-15375969)
chr5 (19-109)||(24140453-24140543)
chr5 (76-232)||(20744548-20744699)
chr5 (20-157)||(15690790-15690928)
chr5 (142-209)||(20563993-20564056)
chr5 (19-232)||(34128647-34128856)
chr5 (20-107)||(18208249-18208335)
chr5 (20-123)||(19283840-19283942)
chr5 (166-232)||(15375773-15375839)
chr5 (20-106)||(17185475-17185561)
chr5 (143-241)||(16523672-16523766)
chr5 (190-239)||(17314984-17315033)
chr5 (20-105)||(19086181-19086266)
chr5 (31-108)||(23388837-23388914)
chr5 (166-239)||(28664917-28664989)
chr5 (31-107)||(17171553-17171629)
chr5 (20-79)||(24167612-24167671)
chr5 (20-106)||(24852173-24852259)
chr5 (31-108)||(20858708-20858785)
chr5 (171-227)||(24140596-24140651)
chr5 (52-108)||(24260560-24260616)
chr5 (24-108)||(26120881-26120964)
chr5 (20-108)||(36175146-36175233)
[»] scaffold0638 (1 HSPs)
scaffold0638 (26-248)||(684-904)
[»] scaffold0035 (1 HSPs)
scaffold0035 (20-227)||(69925-70128)
[»] scaffold0001 (1 HSPs)
scaffold0001 (26-254)||(69099-69323)
[»] scaffold0008 (2 HSPs)
scaffold0008 (20-248)||(54872-55097)
scaffold0008 (20-64)||(48233-48277)
[»] scaffold0024 (1 HSPs)
scaffold0024 (25-245)||(39601-39818)
[»] scaffold0062 (1 HSPs)
scaffold0062 (31-232)||(43105-43303)
[»] scaffold0102 (1 HSPs)
scaffold0102 (20-245)||(35549-35771)
[»] scaffold0622 (1 HSPs)
scaffold0622 (20-123)||(740-843)
[»] scaffold0043 (1 HSPs)
scaffold0043 (20-107)||(89854-89940)
[»] scaffold0111 (1 HSPs)
scaffold0111 (122-227)||(3749-3850)
[»] scaffold1869 (1 HSPs)
scaffold1869 (21-181)||(317-475)
[»] scaffold0650 (1 HSPs)
scaffold0650 (20-106)||(6299-6385)
[»] scaffold0056 (2 HSPs)
scaffold0056 (19-108)||(21287-21376)
scaffold0056 (166-227)||(25130-25190)
[»] scaffold0019 (2 HSPs)
scaffold0019 (26-107)||(181706-181786)
scaffold0019 (34-106)||(11266-11338)
[»] scaffold0016 (1 HSPs)
scaffold0016 (31-108)||(3554-3631)
[»] scaffold0671 (1 HSPs)
scaffold0671 (143-239)||(567-658)
[»] scaffold0653 (1 HSPs)
scaffold0653 (20-106)||(4484-4570)
[»] scaffold0386 (1 HSPs)
scaffold0386 (142-237)||(5978-6069)
[»] scaffold0351 (2 HSPs)
scaffold0351 (182-232)||(5642-5692)
scaffold0351 (188-232)||(152-196)
[»] scaffold0128 (1 HSPs)
scaffold0128 (36-106)||(592-662)
[»] scaffold0090 (1 HSPs)
scaffold0090 (20-94)||(7425-7499)
[»] scaffold0054 (1 HSPs)
scaffold0054 (166-248)||(72165-72247)
[»] scaffold0002 (1 HSPs)
scaffold0002 (182-232)||(114659-114709)


Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 31236135 - 31235911
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31236135 aatcgtttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 31236036  T
Q  120 ataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    |||||||||||||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31236035 ataataaaatataagggttagagagttgcaatttttatctct----ttgcaacagagcaagtttacttgtttttggttgcataaaagtaagcaacggtta 31235940  T
Q  220 agattctttgaattccctctatttatatt 248  Q
    |||||||||||||||||||||||||||||    
T  31235939 agattctttgaattccctctatttatatt 31235911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 17359174 - 17359398
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||||||||  |||||||||||| | || ||||||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  17359174 aatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataattctcgttacttatttttaggttgacgat 17359273  T
Q  120 ataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    ||||||||| |||||||||||||||||||||||||||||    |||| |||||| ||||| ||||| |||||||||||||||||||||||    ||||||    
T  17359274 ataataaaagataagggttagagagttgcaatttttatc----tgctggcaacatagcaaatttacctgtttttggttgcataaaagtaagatgcggtta 17359369  T
Q  220 agattctttgaattccctctatttatatt 248  Q
     ||||||| |||| |||||||||||||||    
T  17359370 ggattcttcgaatcccctctatttatatt 17359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 12208613 - 12208838
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||| ||| ||||||||| |||  ||||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  12208613 aatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttatttttgtaagttgacg 12208712  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |||||| || ||| |||||||||| | ||| || |||| |||    || |||||||||||||||||||| || |||| | |||| |||||||| || |||    
T  12208713 atataa-aagataaaagggttagaaaggtttcagttttaatc----tgtttgcaacagagcaagtttacctg-ttttagctgcagaaaagtaagcagcgg 12208806  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| ||||||| |||| ||| |||||||||||    
T  12208807 ttaggattcttcgaatcccccctatttatatt 12208838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 225
Target Start/End: Complemental strand, 25405715 - 25405516
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgat 119  Q
    |||||||| |||||||||||||||||| | |||||| |||| |||| ||||||||||| ||||||| | ||| |||||||||||||  ||||||||||||    
T  25405715 tcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttatttttgtaagttgacgat 25405616  T
Q  120 ataataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    |||  ||| | ||||||||||| || ||||||||||||    |||| |||||||||||||||||||||||||||||||||||  ||||||| || |||||    
T  25405615 ata--aaagtttaagggttagaaagcttgcaattttta----tttgtttgcaacagagcaagtttacttgtttttggttgca-gaaagtaagcagcggtt 25405523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 248
Target Start/End: Original strand, 9401542 - 9401742
Alignment:
Q  45 taagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacgatataataaaatataagggttagag 142  Q
    |||| |||||||| |||| |||   |||||||||| ||||||| ||||||||||||||||||||  ||||||  |||||||||||| |||| ||||||||    
T  9401542 taagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttttgtaagttgttgatataataaaagataacggttagag 9401641  T
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatt 242  Q
    ||||||||||||||||    || ||||||||||| |||||||| || |||||||| || ||||||||  | |||||| ||||||| |||| |||||||||    
T  9401642 agttgcaatttttatc----tgtttgcaacagagtaagtttacctg-ttttggttacaaaaaagtaagtagcggttaggattcttcgaatcccctctatt 9401736  T
Q  243 tatatt 248  Q
    ||||||    
T  9401737 tatatt 9401742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 15544053 - 15543845
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactta--tttttaagttgacg 117  Q
    |||||||||| |||||||||||||||||| |||||||| |||| ||    |||||||||| ||||||| |||||| ||||||||  ||||||| ||||||    
T  15544053 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttatttttttaatttgacg 15543954  T
Q  118 atataataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||   |||||| ||||||||| | ||||||||||||||||    |||| |||||||| || |||||||| ||||||| |||||| |||||||| ||||||    
T  15543953 at---ataaaagataagggttaaaagagttgcaattttta----tttgtttgcaacatagtaagtttacctgttttttgttgcagaaaagtaagcaacgg 15543861  T
Q  217 ttaagattctttgaat 232  Q
    ||| ||||||| ||||    
T  15543860 ttaggattcttcgaat 15543845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 17610343 - 17610118
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||||||||| |||||||||||| ||||| |||||||| |||| |||  ||||||||||| ||||||| ||||| |||||||||||||  |||| |||||    
T  17610343 aatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgac 17610244  T
Q  117 gatataataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    |||   ||||||  ||| ||||||| || ||| ||||||||    | || |||||||||||||||||||| |||||||||||||| |||||||| || ||    
T  17610243 gat---ataaaagttaaaggttagaaagcttgtaattttta----tatgtttgcaacagagcaagtttacctgtttttggttgcagaaaagtaagcagcg 17610151  T
Q  216 gttaagattctttgaattccctctatttatatt 248  Q
    |||| |||||||||||  ||| || ||||||||    
T  17610150 gttaggattctttgaaacccccctttttatatt 17610118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 13345419 - 13345282
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||||| |||||||||||||||||| ||||||||||||| |||  ||||||||||||||||||| |||||||||||||||||| ||  ||||||||| ||    
T  13345419 gtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgataaaa 13345320  T
Q  124 taaaata--taagggttagagagttgcaatttttatct 159  Q
    ||||| |  ||| ||||| ||| ||||| |||||||||    
T  13345319 taaaagagttaaaggttaaagatttgcagtttttatct 13345282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 16179019 - 16179220
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacg 117  Q
    |||||||||  |||||||||| ||||||| |||||||| |||| | || ||  ||||||| ||||||| |||||  |||||||||||||  |||||||||    
T  16179019 aatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttgtaagttgacg 16179118  T
Q  118 atataataaaatataagggttaga-gagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||||||   ||||||||||||||| |  |||||||||||||||    | |||||||||||||||||||| | |||||||||||| |||||||| || |||    
T  16179119 atataa---aatataagggttagatgtcttgcaatttttatct----gattgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcgg 16179211  T
Q  217 ttaagattc 225  Q
    ||| |||||    
T  16179212 ttaggattc 16179220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 17837533 - 17837615
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||| |||||||||||| ||||| ||||||||||||| |||| ||||||| ||||||| ||| ||||||||||||||||||    
T  17837533 gtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgttacttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 14779577 - 14779763
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||| ||||| ||||||||| |||||||  ||||||||||||| |||  ||||||||||| ||||||| |  |||||||| |||||||  ||||||||||    
T  14779577 aatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttatttttgtaagttgacg 14779676  T
Q  118 atataataaaatataagggttag-agagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||| |||| | || |||||| || |||||||||||||    |||| || ||||| | |||||||||||| ||||||||| | ||||||||    
T  14779677 atataa-aaaagaaaaaggttagaagggttgcaattttta----tttgtttacaacatatcaagtttacttg-ttttggttgaagaaaagtaa 14779763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 21666693 - 21666590
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgat 119  Q
    ||||| || |||||||||||||||||| |||||||| |||| |||  ||||||| ||| ||||||| ||||| |||||||||||||  ||||||||||||    
T  21666693 tcgttaaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataagttgacgat 21666594  T
Q  120 ataa 123  Q
    ||||    
T  21666593 ataa 21666590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 24281289 - 24281391
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| ||| ||||||||| |||  |||| ||||||| ||| || |||| |||||||||| |||||||||||| ||    
T  24281289 aatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttactta-ttttaagttgacaat 24281387  T
Q  120 ataa 123  Q
    ||||    
T  24281388 ataa 24281391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 29242542 - 29242636
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgatataa 123  Q
    |||||||||||||||||| |||||||| |||| | | ||||||||||||  |||||| |||||||||||| ||||||  ||||||||||||||||    
T  29242542 aagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatatttttgtaagttgacgatataa 29242636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 33190689 - 33190909
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  |||||||||| ||||||| ||||||| ||||| ||||  ||||||||||  || ||| || ||| |||||||| |||||||||||||||    
T  33190689 aatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaactcgtgttactta-ttttaagttgacgat 33190787  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  |||||||||  ||||| ||||||| ||| ||||||||    |||| ||||||||| |||||||  || |  |||| ||||| |||||||| || ||    
T  33190788 ataaaataaaatagttaaggtttagaga-ttgtaattttta----tttgtttgcaacagtgcaagttacctgg--tttgattgcagaaaagtaagcagcg 33190880  T
Q  216 gttaagattctttgaattccctctatttat 245  Q
    |||| ||||||||| | |||||||||||||    
T  33190881 gttaggattctttgga-tccctctatttat 33190909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 3591740 - 3591654
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||  |||||||||||||||||  |||||||| |||| |||  ||||||||||||||||||| ||||||| ||||||||||    
T  3591740 aatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaattcgccttacttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 21987938 - 21987865
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| || |||| | |||||||||||| ||||||    
T  21987938 ttgcaacagagcaactttacctgtttttggttgcataaaagtaagcagcggtaaggattctttgaataccctct 21987865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 22664218 - 22664427
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| ||   |||| || ||| ||| ||| || ||||||| |||| |||||||||||||||    
T  22664218 aatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgctta-ttttaagttgacgat 22664316  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | |||||||||||  | ||||||||||||    |||| ||| ||||||||||| |||| || ||||||||||| ||||||||  | ||    
T  22664317 ataaaataaaagagataagggttagtaaattgcaattttta----tttgtttgtaacagagcaag-ttacatg-ttttggttgcagaaaagtaagtagcg 22664410  T
Q  216 gttaagattctttgaat 232  Q
    |||| || |||||||||    
T  22664411 gttaggactctttgaat 22664427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 165
Target Start/End: Complemental strand, 51473950 - 51473816
Alignment:
Q  33 gtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaa---t 129  Q
    |||||||||||||||| |||||||| |||| | |  ||||||||||||||||||| |||| ||||||||| ||||| ||| ||| ||| |||||||   |    
T  51473950 gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgttttt-agtcgacaataaaataaaagagt 51473852  T
Q  130 ataagggttagagagttgcaatttttatctttttgc 165  Q
      || ||||||||| ||||||||||||||| |||||    
T  51473851 taaaaggttagagatttgcaatttttatctgtttgc 51473816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 16787813 - 16787725
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||  |||||||||||||||||| |||||||| |||  |||  ||||||||||||| ||||| |||| |||||||||||||||    
T  16787813 aatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttacttattttt 16787725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 21449101 - 21449189
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||| ||||||||||| | ||||| ||||   |||||||||||||    
T  21449101 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgttacttattttt 21449189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 24306390 - 24306307
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||| |||||||||||||||||| |||||||| |||| |||  ||||| |||||   ||||||||||||||||||||||||    
T  24306390 tcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcgcgttacttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 22622901 - 22622991
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    |||||||| || ||||||||||||||| || |||||||||||||   |  ||||||| ||| ||||||| ||||||||||||||| |||||    
T  22622901 caatcgttgaccaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgttacttaatttta 22622991  T

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Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 34480981 - 34481067
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| ||| ||| ||||| ||||||| |||| |||  ||||||  ||||| |||||||||||    
T  34480981 aatcgtttaccaagtaataaagtgataagtagaatattatatccacaatgactgtcatttcatccaaaacattcgtgttacttattt 34481067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 18736327 - 18736239
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||  |||||||||||||||||| || ||||| |||| |||  ||||||||||| || |||| ||||  ||||||||||||||    
T  18736327 aatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttattttt 18736239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 23038098 - 23037991
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||||||||  ||||||| |||| |||  ||||||||||| ||| ||| || || ||||||||||||| |  |||| |||    
T  23038098 aatcgtttaccaagtaataaagtgataag-tgagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttacttattttaagtttgatgat 23038000  T
Q  120 ataataaaa 128  Q
    | |||||||    
T  23037999 aaaataaaa 23037991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 16916909 - 16916817
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||||||||| |||||    |||||||| | ||||| |||||||||||||| |||||||| || ||| || ||||||| |||| ||||||    
T  16916909 agttgcaatttttatctctttgc----aacagagcgaatttacctgtttttggttgcagaaaagtaagcagcgggtaggattcttcgaatcccctct 16916817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 147654 - 147745
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    ||||||||||||||||||  |||||||||||  |||  ||||||| ||| ||| ||| |  |||||||||||| |||||| ||||||||||||    
T  147654 aagtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcgttactta-ttttaatttgacgatataa 147745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 16069508 - 16069433
Alignment:
Q  163 tgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||||||||||||||| || ||||||||| | |||||||| || | |||| ||||||| |||| ||||||    
T  16069508 tgcttgcaacagagcaagtttacctg-ttttggttgtagaaaagtaagcagcagttaggattcttcgaataccctct 16069433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 21847646 - 21847729
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttat 104  Q
    |||||||||| ||||||||||||  |||| |||||||  |||| |||  ||||||||||| ||||||| ||||| ||||||||||    
T  21847646 aatcgtttaccaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtccaaacaattcacgttacttat 21847729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 21988069 - 21987981
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||| ||||| || ||||||||||||||| |||||||| ||||  |   ||||||| ||| ||||||  ||||||||||||||||||||    
T  21988069 aatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttattttt 21987981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 14781810 - 14781735
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctat 241  Q
    ||||| |||||||| ||||| |||||||||||||| |||||| | || | |||| ||||||| |||| ||||||||    
T  14781810 ttgcatcagagcaaatttacctgtttttggttgcagaaaagtgatcagcagttaggattcttcgaatcccctctat 14781735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 15813241 - 15813104
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  | ||||||||||||||||  || |||| |||| |||| |||| |||||  ||||||| || || ||||||||| |||||| ||||||||    
T  15813241 aatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaactctcgttactta-ttttaatttgacgat 15813144  T
Q  120 ataataaa-atataagggtt-agagagttgcaatttttat 157  Q
    | |||||| | ||||||||| ||||  |||||||||||||    
T  15813143 aaaataaagagataagggttaagaggtttgcaatttttat 15813104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 22620285 - 22620364
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaa 110  Q
    |||||||||||||||||  |||||||| |||| | |   |||||| ||| ||| ||||||||| ||||||||||||||||    
T  22620285 aagtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttacttatttttaa 22620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 22623046 - 22623120
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctat 241  Q
    |||||||||||||||||||| || ||||||||||| |||||||| || | |||| |||||||  ||| ||||||||    
T  22623046 ttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagctgttaggattcttcaaatcccctctat 22623120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 29242644 - 29242727
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||||||||||||||| |||||    |||||||||||||||| || ||||||||||| ||||||||  | |||||| ||| ||||||||    
T  29242644 gttgcaatttttatctgtttgc----aacagagcaagtttacctg-ttttggttgcaaaaaagtaagaagcggttaggatactttgaat 29242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 25404035 - 25403973
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattcttt 228  Q
    |||||||||||||| ||||| ||||||||||| || ||||||||  | |||||| ||||||||    
T  25404035 ttgcaacagagcaactttacctgtttttggttccagaaaagtaagtagcggttaggattcttt 25403973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 18736196 - 18736123
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||| ||||||||||||| | |||||||||||| |||||||  || |||| | ||||||| |||| ||||||    
T  18736196 ttgcaatagagcaagtttacctatttttggttgcagaaaagtaggcagcggtaaggattcttcgaatcccctct 18736123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 12012887 - 12012803
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttat 104  Q
    |||||||||  ||||| |||||||||||| |||||||  |||| |||   ||||||||||| || |||  |||||||||||||||    
T  12012887 aatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttttatctaaactattcgcgttacttat 12012803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 27117805 - 27117769
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtat 56  Q
    |||||||||| |||||||||||||||||| |||||||    
T  27117805 aatcgtttaccaagtaataaagtgataagtagagtat 27117769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 29719318 - 29719097
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| ||| |||| |||| |||| ||||||||||| || |||| |||||||||||||||||||||  |||||| |    
T  29719318 aatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgttacttatttttagtttgacggt 29719219  T
Q  120 ataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    |||||||||||||||||||||||||||||||||||||    | ||  ||||||||||||||||||| ||| |||||||||| |||||||| || | ||||    
T  29719218 ataataaaatataagggttagagagttgcaattttta----tatgtatgcaacagagcaagtttacctgtgtttggttgcagaaaagtaagcagcagtta 29719123  T
Q  220 agattctttgaattccctctatttat 245  Q
     ||||||| |||| ||||||||||||    
T  29719122 ggattcttcgaatcccctctatttat 29719097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 15339250 - 15339475
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactta-tttttaagttgacga 118  Q
    |||| ||||| |||||||||||||| ||| ||||||||||||| |||  ||||||||||| ||||||| |||| |||||||||| ||| |||||| | ||    
T  15339250 aatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgttacttactttgtaagttaagga 15339349  T
Q  119 tataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    |||||||||| |||||||||||||||||||||||||||    |||| |||||||||||||||||||  ||||||| |||||| |||||||| || | |||    
T  15339350 tataataaaagataagggttagagagttgcaattttta----tttgtttgcaacagagcaagtttatctgttttttgttgcagaaaagtaagcagcagtt 15339445  T
Q  219 aagattctttgaattccctctatttatatt 248  Q
    | |||||||  ||| |||||||||||||||    
T  15339446 aggattcttcaaatcccctctatttatatt 15339475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 17349369 - 17349585
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt-taagttgacga 118  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||| ||||||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  17349369 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttattttgtaagttgacga 17349467  T
Q  119 tataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    |||||||||| ||||||        |||||||||||||||    || ||||||||||||||||||||||||||||||||||| |||||||| || ||||     
T  17349468 tataataaaagataagg--------gttgcaatttttatc----tgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagcagcggtc 17349555  T
Q  219 aagattctttgaattccctctatttatatt 248  Q
    |  |||||| |||| |||||||||||||||    
T  17349556 agaattcttcgaatcccctctatttatatt 17349585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 218
Target Start/End: Complemental strand, 31804983 - 31804791
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacgatat 121  Q
    |||||| || ||||||||||||||| |||||||  |||| |||  ||||| ||||| ||||||  |||  | |||||||||||||  |||||||||||||    
T  31804983 gtttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatctgtgttacttatttttgtaagttgacgatat 31804884  T
Q  122 aataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    ||||||| |||||||||||||||||||||||||||    |||| |||||| | ||||| ||||| |||||||||||||| |||||||| || |||||    
T  31804883 aataaaagataagggttagagagttgcaattttta----tttgtttgcaataaagcaaatttacctgtttttggttgcagaaaagtaagcagcggtt 31804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 25618574 - 25618762
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| |||||||||||||||||| ||||||||||||| |||  ||||||||||| ||| ||| ||||||||| |||||||||| ||||||||||||||||    
T  25618574 ttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgtaacttattttt-agttgacgatataata 25618672  T
Q  126 aaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    ||| |   ||  |||||||| ||||||||||||||    || ||||||||||| |||||||| || ||||||||||| |||||||| || |||||    
T  25618673 aaagagtgaaaagttagagatttgcaatttttatc----tgtttgcaacagagaaagtttacctg-ttttggttgcagaaaagtaagcagcggtt 25618762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 17743563 - 17743355
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aag-ttgac 116  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||| |||||| ||||||| |||||| |||||||||||||  ||| || ||    
T  17743563 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttatttttgcaagtttaac 17743464  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |||   ||||||  |||||||||||||||||||||||||||||||    |||||||  ||||||||||| |||||||||||| | ||||| || |  |||    
T  17743463 gat---ataaaagttaagggttagagagttgcaatttttatcttt----ttgcaactaagcaagtttacctgtttttggttgtagaaaaggaagccgcgg 17743371  T
Q  217 ttaagattctttgaat 232  Q
    ||| |||| |||||||    
T  17743370 ttaggattatttgaat 17743355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 27909206 - 27908981
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  | || | ||||  |||||| ||||| |||||||||||||  |||| |||||    
T  27909206 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttatttttgtaagtttgac 27909107  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||||||| ||  || ||||||||||  |||||||||||||||    || |||||||||||||||||||| || ||||||||||| |||| ||| || |||    
T  27909106 gatataa-aagttaaaagggttagaacgttgcaatttttatc----tgtttgcaacagagcaagtttacctg-ttttggttgcagaaaattaagcagcgg 27909013  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| ||||||| |||| ||| |||||||||||    
T  27909012 ttaggattcttcgaatcccccctatttatatt 27908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 11382840 - 11382636
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |  ||||||||||||||| ||||||||||||| |||   |||||  |||  ||||||||||||||||||||||||||||  ||||||||    
T  11382840 aatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataattcgcgttacttatttttagtttgacgat 11382741  T
Q  120 ataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    |  |||||| |  |||  |||||||| |||||| |||||||    || ||||||||||||||| |||||||||||| |||| | ||||||||||||  ||    
T  11382740 aagataaaagagttaaaagttagagatttgcaaattttatc----tgtttgcaacagagcaag-ttacttgttttttgttgtagaaaagtaaacaattgt 11382646  T
Q  218 taagattctt 227  Q
    || |||||||    
T  11382645 tatgattctt 11382636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 17675717 - 17675491
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtc-caaataattcgcgttacttatttt--taagttgac 116  Q
    |||||||||| ||||||||||| || ||| |||| |||||||| |||  ||||||||||| |||  ||| || || |||||||||||||  |||||||||    
T  17675717 aatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgtttcgtcaaaaaaaactcacgttacttatttttgtaagttgac 17675618  T
Q  117 gatataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||| ||| || ||| |||||||||| | |||||||||||||||    || |||||||||||||||||||| || ||||||||||| |||| |||||| ||    
T  17675617 gatgtaa-aagataaaagggttagaaaggttgcaatttttatc----tgtttgcaacagagcaagtttacctg-ttttggttgcagaaaaataaacagcg 17675524  T
Q  216 gttaagattctttgaattccctctatttatatt 248  Q
    ||||  ||| || |||||||| || ||||||||    
T  17675523 gttagaatttttcgaattccccctgtttatatt 17675491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 17635862 - 17635637
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| ||||||||||| || ||| |||| |||||||| |||  ||||||||||| ||| ||| || || |||||||||||||  ||||||||||    
T  17635862 aatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaactcacgttacttatttttgtaagttgacg 17635763  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    || ||| || ||| |||||||||| | |||||||||||||||    || |||||||||||||||||||| || ||||||||||| | || |||||| | |    
T  17635762 atgtaa-aagataaaagggttagaaaggttgcaatttttatc----tgtttgcaacagagcaagtttacctg-ttttggttgcagataaataaacagcag 17635669  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    |||  ||| || |||||||| || ||||||||    
T  17635668 ttagaatttttcgaattccccctgtttatatt 17635637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 20174722 - 20174575
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||||| || |||  ||||||||||| ||||||| |||||  |||||||| ||||||||||| |||    
T  20174722 aatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttactta-ttttaagttgatgat 20174624  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttatctttttgc 165  Q
    ||  |||||||||  ||||||||||||| ||| ||||||||||| |||||    
T  20174623 ataaaataaaatagttaagggttagaga-ttggaatttttatctgtttgc 20174575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 45621968 - 45621880
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| |||||||||||||| ||| |||||||| ||||||||| ||||||||||| ||||||| |||||| |||||||||||||    
T  45621968 aatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttattttt 45621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 245
Target Start/End: Original strand, 32085479 - 32085695
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat-- 121  Q
    |||||| |||||||||||||||||| ||||||||||||| |||  ||||||||||| ||| ||| |  ||| |||||||| |||||||||||||||||      
T  32085479 gtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagctcgtgttactta-ttttaagttgacgatataa 32085577  T
Q  122 aataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    ||||||| |  |||| |||||||| ||||||||||||||    || |||||||||||||||||  || |  |||||||||| |||||||| || ||||||    
T  32085578 aataaaagagttaagagttagaga-ttgcaatttttatc----tgtttgcaacagagcaagttacctgg--tttggttgcagaaaagtaagcagcggtta 32085670  T
Q  220 agattctttgaattccctctatttat 245  Q
     || ||||| || |||| ||||||||    
T  32085671 ggactcttt-aaatccccctatttat 32085695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 13776351 - 13776545
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    ||||||||| ||| |||||||||||||||  ||||||| |||| |||  ||||||| ||| ||||||| ||  | ||||||||| |||||||||||||||    
T  13776351 aatcgtttattaaataataaagtgataag-tgagtatcgtatccacatagattgtcatttcgtccaaacaacccacgttactta-ttttaagttgacgat 13776448  T
Q  120 ataataaa-atataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    | |||||| | ||||||||| ||||| ||||||||||||||    || ||||||||||| ||| |||| ||||||| ||| || |||||| |||||||||    
T  13776449 aaaataaagagataagggttaagagatttgcaatttttatc----tgtttgcaacagagtaagattacctgttttttgttccagaaaagt-aacaacggt 13776543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 25196021 - 25196127
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt---ttaagttga 115  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |||  | ||||| ||| ||||||| ||||| ||||||||||||   |||||||||    
T  25196021 caatcgtttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttatttttattaagttga 25196120  T
Q  116 cgatata 122  Q
    |||||||    
T  25196121 cgatata 25196127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 29027508 - 29027655
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| || |||||||||||| ||||||||||  |||  |||   ||||| ||||||| ||||||||| |||||||||| |||||||||| ||||    
T  29027508 aatcgtttaccaaataataaagtgatgagcagagtattgtattcacatgaattgttgttttgtgcaaataatttgcgttactta-ttttaagttgccgat 29027606  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgc 165  Q
    ||  ||||||  | |||||||||||||| ||||||||||||||| |||||    
T  29027607 attaaataaaagagataagggttagaga-ttgcaatttttatctgtttgc 29027655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 25887877 - 25887766
Alignment:
Q  132 aagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaa 231  Q
    |||||||||||| ||||||||||||||    || ||||||||||||||| |||| | |||||||||||| |||||||| || || ||| |||||||  ||    
T  25887877 aagggttagagatttgcaatttttatc----tgtttgcaacagagcaag-ttacctatttttggttgcagaaaagtaaccagcgattatgattcttcaaa 25887783  T
Q  232 ttccctctatttatatt 248  Q
    | ||| |||||||||||    
T  25887782 tcccccctatttatatt 25887766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 28925539 - 28925747
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgacgatata 122  Q
    |||| |||||||||||||||||| ||||  |  |||| ||   ||||||||||| ||||||| |||||  |||| |||||||  |||| |||||||||||    
T  28925539 ttaccaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaattcatgttatttatttttgtaagtttgacgatata 28925638  T
Q  123 ataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaag 221  Q
    | || ||| |||||||||| || ||||||||||||    |||| |||||||| ||||||||||| || ||||||||||| |||||||| ||  ||||| |    
T  28925639 a-aagata-aagggttagaaagcttgcaattttta----tttgtttgcaacatagcaagtttacctg-ttttggttgcagaaaagtaagcagaggttagg 28925731  T
Q  222 attctttgaattccct 237  Q
    |||||| |||| ||||    
T  28925732 attcttcgaatcccct 28925747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 29143086 - 29143177
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||||||||| |||||    |||||||||||||||| | |||| ||||| | ||||||||||| |||||||||||||| |||| ||||||    
T  29143086 agttgcaatttttatctgtttgc----aacagagcaagtttacctatttt-ggttgtagaaaagtaaacagcggttaagattcttcgaatcccctct 29143177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 30411804 - 30411880
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagatt 224  Q
    |||||||||||||||| |||||    |||||||||||||||| |||||||||||||| |||||||| || |||||| ||||    
T  30411804 gttgcaatttttatctgtttgc----aacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatt 30411880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 12953288 - 12953227
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctt 227  Q
    |||||||| ||||||||||| |||||||||||||| |||||||| ||||| ||| |||||||    
T  12953288 ttgcaacatagcaagtttacatgtttttggttgcagaaaagtaagcaacgattacgattctt 12953227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 30411690 - 30411778
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||| ||||| | |||||||||||||||| |||||||| |||| |||  ||||||| ||| |||| || |||| |||||||||||||||    
T  30411690 aatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttattttt 30411778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 25885546 - 25885460
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||| |||||||| | |||||| |||| ||||  |||||||||| ||||||| |||| | ||||||||||||    
T  25885546 aatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttatttt 25885460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 25888303 - 25888216
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgac 116  Q
    |||||| |||||||||||||||||| | |||||| |||| |||  |||||||||||    |||| ||||||||||||||| ||||||||||||    
T  25888303 gtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgttt----caaacaattcgcgttactta-ttttaagttgac 25888216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 26603321 - 26603223
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctattt 243  Q
    |||||||||||||||| |||||    ||||||||| |||||| |||||||||||| | |||||||| || |||||| ||||||| ||| |||| ||||||    
T  26603321 gttgcaatttttatctgtttgc----aacagagca-gtttacctgtttttggttgtagaaaagtaagcagcggttaggattcttcgaa-tccccctattt 26603228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 12953370 - 12953288
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagtt 113  Q
    |||||||||||| ||||| |||||||  | || |||  ||||||||||| ||| ||| |||||||||||||||||||| ||||    
T  12953370 aagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttacttattttttagtt 12953288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 45553142 - 45553228
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||  |||||||||||||||||| | | |||| ||| ||||  ||||||||||||||||||  |||||| |||| ||||||    
T  45553142 aatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaattcgtgttaattattt 45553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 25535297 - 25535374
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| |||| || |||||  |||||||||||||    
T  25535297 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttattttt 25535374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 9774414 - 9774333
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    |||| ||| |||||||||||  | |||||||| |||| |||  ||||||||||||||||||  |||| ||||||||||||||||    
T  9774414 ttaccaaggaataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttattttta 9774333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 27418389 - 27418465
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||||||||||| ||||||||||||| |||  |||| || |||   ||||| |||||| ||||||||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttatttt 27418465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 17198034 - 17198084
Alignment:
Q  189 tttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||| |||||||| || |||||||||||||| |||| ||||||    
T  17198034 tttttggttgcagaaaagtaagcagcggttaagattcttcgaatcccctct 17198084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 26667464 - 26667522
Alignment:
Q  181 tttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||| |||||| ||||||| ||||||||||| |||||| ||||||| |||| ||||||    
T  26667464 tttacctgttttcggttgcagaaaagtaaacagcggttaggattcttcgaatcccctct 26667522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 23011844 - 23011764
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||| ||||||||||||| |||| ||| |||  |||| |||| ||||||||||||||| ||| |||| |||||| ||||||    
T  23011844 tttaccaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttttgtctaaacaatttgcgttatttattt 23011764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 24091002 - 24090925
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||  ||| |||| |||| |||  ||||||| ||| ||||||| |||||  |||||||||||||    
T  24091002 aagtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttattttt 24090925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 25196166 - 25196238
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||| ||||||||||| |||||| ||||||| |||||||| ||  ||||| ||||||| || ||||||||    
T  25196166 ttgcaacatagcaagtttacctgtttt-ggttgcaaaaaagtaagcagtggttaggattcttcgatttccctct 25196238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 25530470 - 25530547
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| ||||  | ||||| | ||||||||||||    
T  25530470 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgtaaaattctcattacttattttt 25530547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 25920389 - 25920479
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    ||||||||||||||||| |||||    |||||||| | ||||| |||||||||||||| |||||| | ||  | ||| |||||||||||| ||||    
T  25920389 agttgcaatttttatctgtttgc----aacagagcgattttacctgtttttggttgcagaaaagtgagcagtgattatgattctttgaatcccct 25920479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 17890093 - 17890167
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatt 242  Q
    ||||||||||||||||| || |||||| ||||||| ||| |||| ||||| |||||||||||| ||| ||| |||||    
T  17890093 ttgcaacagagcaagtt-acctgtttt-ggttgcagaaatgtaagcaacgattaagattctttcaatcccccctatt 17890167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 27737776 - 27737567
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||| ||||||||||| | |||| |||||| |||| ||||||| |||||||||||||||||||  ||||||||||    
T  27737776 aatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttacttatttttgtaagttgacg 27737677  T
Q  118 atataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    ||| ||| ||| |||||||||||||||||||||||||||||    || |||||||||||||||||||| ||||||| |||||| |||||||| || ||||    
T  27737676 ataaaatgaaagataagggttagagagttgcaatttttatc----tgtttgcaacagagcaagtttacctgttttt-gttgcaaaaaagtaagcagcggt 27737582  T
Q  218 taagattctttgaat 232  Q
    || ||||||| ||||    
T  27737581 taggattcttcgaat 27737567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 22410410 - 22410238
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||||| |||||||||| ||||||| |||||||| |||| |||  |||||||||||  | |||| ||||| |||||||||||||||||||||||||||||    
T  22410410 gtttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttttaagttgacgatataa 22410311  T
Q  124 taaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgca 200  Q
    ||||| ||||||||||||   ||||||||||||||    || |||||||||||||||||| | | ||||||||||||    
T  22410310 taaaagataagggttagaatcttgcaatttttatc----tgtttgcaacagagcaagttttcctatttttggttgca 22410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 23844552 - 23844351
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||| |  ||||||||||| ||||||| || ||||||||||||||||  ||||||||||    
T  23844552 aatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaagttgacg 23844453  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |||||| || ||| |||||||||| | |||||||||||||||    || |||||| ||| ||||||||| || |||||||||||||||||||| || |||    
T  23844452 atataa-aagataaaagggttagaaatgttgcaatttttatc----tgtttgcaatagaccaagtttacctg-ttttggttgcataaaagtaagcagcgg 23844359  T
Q  217 ttaagatt 224  Q
    ||| ||||    
T  23844358 ttaggatt 23844351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 23143734 - 23143874
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt-taagttgacga 118  Q
    |||| ||||| || ||||||||||||||| ||||||||||||| |||  ||||||||||| ||||||| |||||  |||||||||||| |||||||||||    
T  23143734 aatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaattcatgttacttattttgtaagttgacga 23143833  T
Q  119 tataataaaatataagggttagagagttgcaatttttatct 159  Q
    |||||||||| |||| |||||||||||| ||||||||||||    
T  23143834 tataataaaagataaaggttagagagtttcaatttttatct 23143874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 248
Target Start/End: Complemental strand, 14079483 - 14079320
Alignment:
Q  81 gtccaaataattcgcgttacttatttttaagttgacgatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaag 180  Q
    ||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    || |||||||| || |||    
T  14079483 gtccaaaaaatccgcgttacttatttttaagttgacgatatgctaaaatataagggctagagagttgcaatttttatc----tgtttgcaacaaaggaag 14079388  T
Q  181 tttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    ||| | | ||||||||| || |||||||| || ||||||  |||||| |||||||| |||||||||||    
T  14079387 ttttcctatttttggttacagaaaagtaagcagcggttagaattcttcgaattccccctatttatatt 14079320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 17827177 - 17826969
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat 121  Q
    ||||||| ||||||||||||| ||||  |||||||| |||| |||  |||||||||||  |||||| ||||||||||||||||||||   ||||| ||      
T  17827177 tcgtttaataagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattttttttttgacaat-- 17827080  T
Q  122 aataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
     |||||| ||||||||| | ||||||||||||||||    | || |||||||| ||| |||||||||||||||||||||| |||||||| |||||||||     
T  17827079 -ataaaagataagggttaaaagagttgcaattttta----tatgtttgcaacatagc-agtttacttgtttttggttgcagaaaagtaagcaacggttag 17826986  T
Q  221 gattctttgaattccct 237  Q
     ||||||||||||||||    
T  17826985 aattctttgaattccct 17826969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 232
Target Start/End: Complemental strand, 28933733 - 28933539
Alignment:
Q  34 taataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aataaa--at 129  Q
    ||||||||||||||| |||||||| |||| |||| |||| |||||| ||||||| |||| | ||| |||| ||||||||||| |||||  ||||||  |     
T  28933733 taataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgctta-ttttaagttgatgatataaaataaaagag 28933635  T
Q  130 ataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttg 229  Q
    |||||||||||||| ||||||||||||||    || ||||||||||||||| ||||||||| ||||||||| ||||| ||||| |||||| || ||||||    
T  28933634 ataagggttagaga-ttgcaatttttatc----tgtttgcaacagagcaag-ttacttgttcttggttgca-aaaaggaaacagcggttaggactctttg 28933542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 9516797 - 9516919
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    ||||||||||  ||||||||||||||||| |||||||| |||| |||  ||||||||||| ||||||| || ||||||||||||||||  ||||||||||    
T  9516797 aatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaagttgacg 9516896  T
Q  118 atataataaaatataagggttaga 141  Q
    |||||| || ||| ||||||||||    
T  9516897 atataa-aagataaaagggttaga 9516919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 27124579 - 27124368
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt-aagttgacga 118  Q
    |||||||||| |||||||||||||||||  | | |||| |||| |||  ||||||||||| |  |||| ||||| |||||||||||||| || |||||||    
T  27124579 aatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttatttttgaacttgacga 27124480  T
Q  119 tataataaaatataagggttaga-gagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    |||||   || |||||||||| | || || |||||||||| | |||||    |||||||||||||||| ||| || ||||||| |||||||| || ||||    
T  27124479 tataa---aacataagggttaaaagacttccaatttttatatgtttgc----aacagagcaagtttacctgtctt-ggttgcagaaaagtaagcagcggt 27124388  T
Q  218 taagattctttgaattccct 237  Q
    ||||||||||||||| ||||    
T  27124387 taagattctttgaatcccct 27124368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 21907444 - 21907660
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| | |||||| |||| |||| ||||||||||| ||||||| || ||||||||||||  |||||||||| |||    
T  21907444 aatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaaaaagtcgcgttactta-atttaagttgatgat 21907542  T
Q  120 at--aataaa--atataagggttagagagttgc--aatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaa 213  Q
    ||  ||||||  | |||||||||||| | || |  ||||||||||    || ||||||||||||||| |||  | |||||||||||| ||||| |||||     
T  21907543 ataaaataaaagagataagggttaga-aattacataatttttatc----tgtttgcaacagagcaag-ttagctatttttggttgcaaaaaaggaaacag 21907636  T
Q  214 cggttaagattctttgaattccct 237  Q
    |||||| || ||||||||| ||||    
T  21907637 cggttacgactctttgaatcccct 21907660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 257
Target Start/End: Complemental strand, 12183418 - 12183185
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| | |||||| |||| |||  ||||||| ||| |||| || ||||| ||||||||| ||||||| |||||||    
T  12183418 aatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaattcacgttactta-ttttaaggtgacgat 12183320  T
Q  120 at--aataaaa---tataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    ||  |||||||   | ||| ||||||||| ||||||| ||||||    || |||||||| |||||| |||| || |||||||| || |||||||| ||||    
T  12183319 ataaaataaaagagtttaaaggttagaga-ttgcaatgtttatc----tgtttgcaacatagcaag-ttacctg-ttttggttacagaaaagtaagcaac 12183227  T
Q  215 ggttaagattctttgaattccctctatttatattcttcgacat 257  Q
    ||||| ||||||| ||| |||| ||||||||||| || |||||    
T  12183226 ggttaggattcttcgaa-tccccctatttatattgttggacat 12183185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 21679938 - 21679790
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||  |||| || ||| ||||||| |||||| ||||||| ||||| ||||||||||    
T  21679938 aatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttactt-ttttttagttgacgat 21679840  T
Q  120 ataataa----aatataagggttagagagttgcaatttttatctttttgc 165  Q
    | |||||    | |  |||| ||||||| ||||||||||||||| |||||    
T  21679839 aaaataataagagttaaaggattagagatttgcaatttttatctatttgc 21679790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 9726034 - 9726120
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  ||||||||||| ||||||| |||| |||||||||||||    
T  9726034 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 11176961 - 11177183
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacga 118  Q
    |||||||||||  |||| |||||||||||| |||||||| |||| |||  | |||||||||  || |||||||||| |||||||| |||||| |||||||    
T  11176961 caatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataattcgtgttactta-ttttaaattgacga 11177059  T
Q  119 tat--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    |||  ||||||  | |||||||||||| | ||||||||||||    |  | |||||||| |||||| |||| ||||||| ||| |||||||| ||||| |    
T  11177060 tataaaataaaagagataagggttaga-aattgcaattttta----taagtttgcaacatagcaag-ttacctgttttttgttacataaaaggaaacagc 11177153  T
Q  215 ggttaagattctttgaattccctctattta 244  Q
    ||||| || ||||| ||| |||||||||||    
T  11177154 ggttaggactctttaaatcccctctattta 11177183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 17729164 - 17729244
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttac 100  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||| ||||||||||| |||||||  |||||||||||    
T  17729164 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgttac 17729244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 21672522 - 21672374
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||| || ||| ||||||| |||||| ||||||| ||||| ||||||||||    
T  21672522 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttactt-ttttttagttgacgat 21672424  T
Q  120 ataataa----aatataagggttagagagttgcaatttttatctttttgc 165  Q
    | |||||    | |  |||| ||||||| ||||||||||||||| |||||    
T  21672423 aaaataataagagttaaaggattagagatttgcaatttttatctatttgc 21672374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 23645854 - 23645633
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| | |  ||||||||||| ||||||| ||||  ||||| |||||||| |    || ||    
T  23645854 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttga----acaat 23645759  T
Q  120 ataataaaata-------taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaaca 212  Q
    | |||||||||       | ||||||||||| ||||||||||||    |||| ||||||||||||||| |||| || |||||||||||||||||||| ||    
T  23645758 aaaataaaataaaagagttgagggttagaga-ttgcaattttta----tttgtttgcaacagagcaag-ttacatg-ttttggttgcataaaagtaagca 23645666  T
Q  213 acggttaagattctttgaattccctctatttat 245  Q
      ||||| | |||||||||| | ||||||||||    
T  23645665 gtggttaggcttctttgaatccgctctatttat 23645633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 4339761 - 4339834
Alignment:
Q  34 taataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||||||||||  ||||||| |||||||||||    
T  4339761 taataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcattacttatttt 4339834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 23232067 - 23231982
Alignment:
Q  23 cgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    ||||||| |||||||||||||||||| || |||||||||| | ||  ||||||| || ||||||| ||||||||||||||||||||    
T  23232067 cgtttaccaagtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttattttt 23231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 5624652 - 5624861
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaat---gattgtcgttttgtccaaataattcgcgttacttatttt--taag-tt 113  Q
    |||||||||| |||||||||||||||||| |||||||| ||  ||||||   |||||||||||||| |||| |||| ||||||||||||||  |||| ||    
T  5624652 aatcgtttaccaagtaataaagtgataagtagagtatctta--tacaatagagattgtcgttttgtgcaaacaatttgcgttacttatttttgtaagttt 5624749  T
Q  114 gacgatataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaaca 212  Q
    ||||||   | ||||  ||||||||||| | |||||||||||||||    || ||| || ||||| |||||||  | ||||||||||| |||||||| ||    
T  5624750 gacgat---agaaaagttaagggttagaaaggttgcaatttttatc----tgtttgtaatagagc-agtttaccggcttttggttgcagaaaagtaagca 5624841  T
Q  213 acggttaagattctttgaat 232  Q
     |||||| ||||||| ||||    
T  5624842 gcggttaggattcttcgaat 5624861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 20005966 - 20005899
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaa 87  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||  |||| |||||| |||||||    
T  20005966 aatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaaa 20005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 248
Target Start/End: Complemental strand, 6630705 - 6630554
Alignment:
Q  94 gcgttacttatttttaagttgacgatataa--taaaa--tataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgt 189  Q
    |||||||||||||| |||||||| ||||||  |||||  ||||| ||||||||| ||||||||||||| |||||   |||||||||||||||| || |||    
T  6630705 gcgttacttatttt-aagttgacaatataaaataaaagatataaaggttagaga-ttgcaatttttattttttt---tgcaacagagcaagtt-acctgt 6630612  T
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    ||||||||||| ||| | ||| | |||||| || ||||||||| ||| |||||||||||    
T  6630611 ttttggttgcaaaaatggaaatagcggttaggactctttgaataccc-ctatttatatt 6630554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 18075471 - 18075367
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcg-ttacttatttttaagttgacgatata 122  Q
    |||||| ||||||||||||||||||||||||||| |||| ||   ||||||||||||||||||| |||  | | |||||||||||| ||||||| ||| |    
T  18075471 gtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaatctgagtttacttattttt-agttgacaataaa 18075373  T
Q  123 ataaaa 128  Q
    ||||||    
T  18075372 ataaaa 18075367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 22566244 - 22566163
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||  ||||||| || ||| ||  ||||||||||||||||||    
T  22566244 tttaccaagtaataaagtgataagtagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttacttattt 22566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 20005894 - 20005789
Alignment:
Q  131 taagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttg 229  Q
    ||||||||||| || |||||||||||||    ||| |||||||||||| ||||||| |||||||||||||| ||| |||  || |||||||||||||| |    
T  20005894 taagggttagaaagcttgcaatttttat----ttgtttgcaacagagcgagtttacctgtttttggttgcagaaaggtatgcagcggttaagattcttcg 20005799  T
Q  230 aattccctct 239  Q
    ||| ||||||    
T  20005798 aatcccctct 20005789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 21688883 - 21688795
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    ||||||||||||||||||| |||||||||| |||||||  |||| | |  ||||||||||   |||||| |||||||||||||||||||    
T  21688883 caatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttacttatttt 21688795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 17299918 - 17299832
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| |||||||| |||  |    ||||||||||| ||||||| |||| |||||||||||||    
T  17299918 aatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 20002423 - 20002338
Alignment:
Q  74 tcgttttgtccaaataattcgcgttacttatttttaagttgacgatataat-aaaatataagggtt-agagagttgcaatttttat 157  Q
    |||||||||||||||||| ||||||||||||||| |  ||||||||| ||| |||| ||||||||| ||||| ||||||| |||||    
T  20002423 tcgttttgtccaaataatccgcgttacttattttaagtttgacgataaaataaaaagataagggttaagagatttgcaatatttat 20002338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 24251530 - 24251611
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactta 103  Q
    |||||||| |||||||||||| |||||||||| |||  ||| |||  | ||||||| ||||||||| |||||||||||||||    
T  24251530 tcgtttaccaagtaataaagtcataagcagaggatcgcatccacagggtttgtcgtcttgtccaaacaattcgcgttactta 24251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 8241289 - 8241434
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||| ||||||||||| |||||||| |||| |||| | ||| ||||||||||||| ||||| | ||||||||||| |  || |||||    
T  8241289 aatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaattcacattacttatttt-agtttcacgat 8241385  T
Q  120 ataa--taaaata--taagggttagagagttgcaatttttatctttttgc 165  Q
    ||||  ||||| |  |||| |||||||| ||||||||||||||| |||||    
T  8241386 ataaaataaaagagttaagagttagaga-ttgcaatttttatctgtttgc 8241434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 14637026 - 14637104
Alignment:
Q  169 caacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    ||||||||||||||||| |||||||||||||| |||||||| || ||  || ||||||| ||| |||| |||||||||||    
T  14637026 caacagagcaagtttacctgtttttggttgcagaaaagtaagcagcgaataggattcttcgaa-tccccctatttatatt 14637104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 19244598 - 19244664
Alignment:
Q  21 atcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaa 87  Q
    ||||||||| |||||||||||||||||| ||||||||  ||||| |  ||||||||||| |||||||    
T  19244598 atcgtttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaa 19244664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 25927387 - 25927305
Alignment:
Q  23 cgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatt 105  Q
    ||||||| |||||||||||||||||| ||| |||| |||| |||  |||| | |||| ||||||| ||||| |||||||||||    
T  25927387 cgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaattcacgttacttatt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 9838380 - 9838455
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    ||||||||||||||||| |||||||  |||| |||  ||||||| ||||||  ||| || ||||||||||||||||    
T  9838380 agtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttatttt 9838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 18075331 - 18075288
Alignment:
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaatt 233  Q
    ||||||||||| |||||||| || ||||||||||||||||||||    
T  18075331 ttttggttgcagaaaagtaagcagcggttaagattctttgaatt 18075288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 25781915 - 25782014
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctattt 243  Q
    |||||||||||||||| |||||    |||||||||||||||| | |||| ||||||| |||||||||||   |||| ||||||| |||| |||||| | |    
T  25781915 gttgcaatttttatctgtttgc----aacagagcaagtttacctatttt-ggttgcagaaaagtaaacagtagttaggattcttcgaatcccctctgtat 25782009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 28586117 - 28586058
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    ||||||||||  ||||||||| ||||||| ||||||||||||| |||  |||||||||||    
T  28586117 aatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgttt 28586058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 22413125 - 22413048
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||| ||||| |||||||| ||||||||  ||||||  ||| |||| || |||||  |||||||||||||    
T  22413125 aagtaataaagttataagtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttattttt 22413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 17382157 - 17382217
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgtttt 80  Q
    |||||||||| ||  ||||||||||| || |||||||| ||||||||  ||||||||||||    
T  17382157 aatcgtttaccaatgaataaagtgatgagtagagtatcgtatctacagggattgtcgtttt 17382217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 17382224 - 17382275
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    |||||||||||||||||||| || ||||||||||| |||||||| || |||||    
T  17382224 ttgcaacagagcaagtttacatg-ttttggttgcagaaaagtaagcagcggtt 17382275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 13315074 - 13314865
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt-taagttgacgatataa 123  Q
    ||||| |||||||||||||||||| | |||||| |||| |||  |||| | |||| ||||||| ||||||||||||||||||| ||||||||||||||||    
T  13315074 tttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttattttataagttgacgatataa 13314975  T
Q  124 taaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagat 223  Q
    ||||| ||||  |||||||||||||||||||||    | || ||||||| || ||| ||||| |||||||||||||| |||||||| |||||||||||||    
T  13314974 taaaagataaacgttagagagttgcaattttta----tatgtttgcaactgaacaaatttacctgtttttggttgcagaaaagtaagcaacggttaagat 13314879  T
Q  224 tctttgaattccct 237  Q
    |||| |||| ||||    
T  13314878 tcttcgaatcccct 13314865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 18448629 - 18448423
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agttgacg 117  Q
    |||| ||||| |||||||||||| ||||  |||| ||| |||| | |  ||||||||||||||||||| ||||| |||||||||||||||  ||||||||    
T  18448629 aatcatttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttatttttataagttgacg 18448530  T
Q  118 atataataaaatataagggttagagagt--tgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    |||||| || ||| || ||||||| |||  |||| ||||||||| |||||    ||||||||||||| || ||||||||||||||||||||||| |||||    
T  18448529 atataa-aagata-aatggttagaaagtcttgcagtttttatctgtttgc----aacagagcaagtt-acctgtttttggttgcataaaagtaagcaacg 18448437  T
Q  216 gttaagattctttg 229  Q
    |||| |||||||||    
T  18448436 gttatgattctttg 18448423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 248
Target Start/End: Complemental strand, 24114365 - 24114146
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgatat 121  Q
    |||||| |||||||||| ||||||| |||||||| ||||  ||  ||||||||||| ||||||| || | ||||||||||||||  ||||||||||||      
T  24114365 gtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgttacttatttttgtaagttgacgat-- 24114268  T
Q  122 aataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
     |||||| |||||||||| | | |||||||||||||||    || ||||| |||||||||||||| || |||||||  |  |||||||| || ||||||     
T  24114267 -ataaaagataagggttataaaggttgcaatttttatc----tgtttgcagcagagcaagtttacctg-ttttggtatctgaaaagtaagcagcggttag 24114174  T
Q  221 gattctttgaattccctctatttatatt 248  Q
    ||||||| |||| ||| |||||||||||    
T  24114173 gattcttcgaatcccccctatttatatt 24114146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 29382448 - 29382244
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||||||||||  |||||| |||| ||||||||||||||  |||| |||||    
T  29382448 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttacttatttttgtaagtttgac 29382349  T
Q  117 gatataataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    |||   ||||||  ||| ||||||| || ||||||||||||||    || |||||||| ||||||| ||| | |||||||||||| |||||||| ||  |    
T  29382348 gat---ataaaagttaatggttagaaagcttgcaatttttatc----tgtttgcaacatagcaagtgtacctatttttggttgcagaaaagtaagcagtg 29382256  T
Q  216 gttaagattctt 227  Q
    |||| |||||||    
T  29382255 gttaggattctt 29382244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 14626118 - 14626179
Alignment:
Q  96 gttacttatttttaagttgacgatataataaaatataagggttagagagttgcaatttttat 157  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  14626118 gttacttattttttagttgaagatataataaaatataagggttagagagttgcaatttttat 14626179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 14528161 - 14528308
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||| | |||||||| |||| |||  ||||||||||| ||||||| || || ||||||||| ||||||  |||||||    
T  14528161 aatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgttactta-ttttaaactgacgat 14528259  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttatctttttgc 165  Q
    ||  |||||||||  ||||||||||||| |||||||||||| || |||||    
T  14528260 ataaaataaaatagttaagggttagaga-ttgcaatttttagctgtttgc 14528308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 27659468 - 27659562
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgatataa 123  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||| | | || ||||||||||||  ||||||||||||||||    
T  27659468 aagtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttgtaagttgacgatataa 27659562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 6884982 - 6885115
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaa-ata 130  Q
    |||||||||||||||||  ||||||| ||||||||  ||||||||||| ||||||| || | ||| |||||||||| |  ||||||||| |||||| | |    
T  6884982 agtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaaacaacttgcgctacttattttaagtttgacgataaaataaagaga 6885080  T
Q  131 taaggg-ttagagagttgcaatttttatctttttg 164  Q
    |||||| ||||||| ||||||||||||||| ||||    
T  6885081 taagggtttagagatttgcaatttttatctgtttg 6885115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 17509257 - 17509442
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgac 116  Q
    |||||||| || |||||||||||||||||| ||||||||||||| |||  ||||||  ||| ||||||| ||||| | |||||||||||  |||||||||    
T  17509257 caatcgttaaccaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttatttttataagttgac 17509356  T
Q  117 gatataataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    | ||||  ||||| |||||||| | ||| |||||||||| | |    || |||||| ||||||||||||| ||||||| |||||| ||||||||    
T  17509357 ggtata--aaaat-taagggttaaaagacttgcaattttcacc----tgtttgcaatagagcaagtttacctgttttt-gttgcaaaaaagtaa 17509442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 236
Target Start/End: Original strand, 19786743 - 19786956
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||| ||| | ||||||||||| | |  || |||||||| ||||||| || ||| |||||||  ||||||||||| |||    
T  19786743 aatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaactcgtgttactt-gttttaagttgatgat 19786841  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | ||||  |||||||| ||| ||||||||||    || ||||||||||||||| |||| |||||||| ||| | ||||| |||||| |    
T  19786842 ataaaataaaagagataaaagttagaga-ttgtaatttttatc----tgtttgcaacagagcaag-ttacatgtttttgattgtagaaaaggaaacaatg 19786935  T
Q  216 gttaagattctttgaattccc 236  Q
    |||| || |||||||||||||    
T  19786936 gttaggactctttgaattccc 19786956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 34497127 - 34497275
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||||| || |||||||| |||| | |  || |||||||| ||||||| ||| | ||||||||| |||||| ||||||||    
T  34497127 aatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttactta-ttttaaattgacgat 34497225  T
Q  120 at--aataaaa---tataagggttagagagttgcaatttttatctttttgc 165  Q
    ||  |||||||   |  |||||||||||| |||||||||||||||||||||    
T  34497226 ataaaataaaagagttaaagggttagaga-ttgcaatttttatctttttgc 34497275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 232
Target Start/End: Complemental strand, 25182510 - 25182306
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa- 123  Q
    ||||| || ||||||||||| ||| |||||||| |||  |||  ||||||| ||| ||| |||    | |||||||||||||| |||||||||||||||     
T  25182510 tttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgcttgcgttacttatttt-aagttgacgatataaa 25182412  T
Q  124 -taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
     ||||| |  ||||||||||||| ||||||||||||||| |||||    ||||||||||||| || |||||||||||||| ||||| |||||  |||||     
T  25182411 ataaaagagataagggttagaga-ttgcaatttttatctatttgc----aacagagcaagtt-acctgtttttggttgcagaaaaggaaacagtggttag 25182318  T
Q  221 gattctttgaat 232  Q
    || |||||||||    
T  25182317 gactctttgaat 25182306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 24904645 - 24904731
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||| ||||| || ||||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||| ||||| | ||||||||||    
T  24904645 aatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttattt 24904731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 30806584 - 30806438
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcata-----tctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttg 114  Q
    ||||||||| ||||||||||||||||||| |||||||| ||     || |||| |||||||||||  |||||| |||| |||||||||| |||||  |||    
T  30806584 aatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaacaatttgcgttactta-ttttagtttg 30806486  T
Q  115 acgatat--aataaaata--taagggttagagagttgcaatttttatct 159  Q
    |||||||  ||||||| |  ||||||||||||| |||||||||||||||    
T  30806485 acgatataaaataaaagagttaagggttagaga-ttgcaatttttatct 30806438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 248
Target Start/End: Original strand, 24269615 - 24269833
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagtt-gacgatat 121  Q
    ||||| ||||||||||||| |||| |||||||| |||| |||  ||||||||||| ||||||| ||||| | ||| ||||||||  ||||| |||| |||    
T  24269615 tttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatttatttttgtaagtttgacggtat 24269713  T
Q  122 aataaaatataagggttagag-agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
    || |||   |||| ||| ||  ||||||||| ||||||| |||||    ||||||| | |||||| |||||||||||||| |||||||| || ||||||     
T  24269714 aaaaaa---taagagtttgaatagttgcaatctttatctgtttgc----aacagagta-gtttacctgtttttggttgcagaaaagtaagcagcggttag 24269805  T
Q  221 gattctttgaattccctctatttatatt 248  Q
    ||||||| |||| ||| || ||||||||    
T  24269806 gattcttcgaatcccccctgtttatatt 24269833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 30122230 - 30122156
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||||||| |||| ||||||||||||| |||  ||||||| ||||||||||| ||||||| ||||||||||    
T  30122230 aagtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcattacttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 5850953 - 5851039
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||||||||||   ||||| ||| || |||||||||||    
T  5850953 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatccgtgttacttattt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 21314641 - 21314865
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| |||||||||||||||||| || ||||| ||||||||  |||| |||||| || |||| ||| | |||||||||||||| ||||  | ||||||||    
T  21314641 ttaccaagtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttattttt-agttaccaatataata 21314739  T
Q  126 aaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagat 223  Q
     || |  ||| |||||||   ||||||| ||||||    ||||| ||| ||||||||||| | ||||||| ||| |||||||||||  | |||||| ||     
T  21314740 gaagagttaaaggttagaagtttgcaatatttatc----tgcttacaatagagcaagtttgcctgtttttagttacataaaagtaagtagcggttaggag 21314835  T
Q  224 tctttgaattccctctatttatattcttcga 254  Q
    | || ||| |||| ||||| |||||||||||    
T  21314836 tattcgaa-tccccctattgatattcttcga 21314865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 26394642 - 26394562
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    |||||||| ||||||||||| |||||| ||||||| |||||||| ||||||||| ||||||| ||| |||| |||||||||||    
T  26394642 ttgcaacaaagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattcttcgaa-tccccctatttatatt 26394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 2637621 - 2637697
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||||||| ||| ||| || || |||||||||||||    
T  2637621 aagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 165
Target Start/End: Original strand, 13697897 - 13698014
Alignment:
Q  50 agagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatata----ataaaatataagggttagagagt 145  Q
    |||||||| |||| |||| |||| |||||| ||||||| ||   |||||||||| ||||||||||||||||||    | || | |||||||||||||| |    
T  13697897 agagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttactta-ttttaagttgacgatataaaatacaagagataagggttagaga-t 13697994  T
Q  146 tgcaatttttatctttttgc 165  Q
    |||||||||||||| |||||    
T  13697995 tgcaatttttatctctttgc 13698014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 17101980 - 17101875
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttact--tatttttaagttgacg 117  Q
    |||||||||| |||||||||||||||||| |||||||| |||| | |  |||||||||||  |||||| |||  | ||||||  ||||| ||||||||||    
T  17101980 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaatatgtgttacttatatttgtaagttgacg 17101881  T
Q  118 atataa 123  Q
     |||||    
T  17101880 gtataa 17101875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 44011110 - 44011025
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||  ||||||||||| ||| |||| |||| |||||| |||||    
T  44011110 aatcgtttacgaagtaataaagtg-taagtagagtatcgtatccacatggattgtcgtttcgtcaaaatgattcacgttacatattt 44011025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 23893277 - 23893200
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    ||||||| |||||||||| ||||||||||||| |||  ||||||  |||||||| || |||||  |||||||||||||    
T  23893277 aagtaatgaagtgataagtagagtatcatatcaacatagattgttcttttgtccgaacaattcttgttacttattttt 23893200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 24644855 - 24644935
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||| ||||||||||||| |||| |||||||  |||| |||  |||| ||||||| |||||||||||||| ||||||||||    
T  24644855 tttaccaagtaataaagtg-taagtagagtattgtatccacatggattatcgttttttccaaataattcgcattacttattt 24644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 26394693 - 26394661
Alignment:
Q  96 gttacttatttttaagttgacgatataataaaa 128  Q
    |||||||||||||||||||||||||||||||||    
T  26394693 gttacttatttttaagttgacgatataataaaa 26394661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 30783828 - 30783772
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcg 76  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  ||||||||    
T  30783828 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 17101849 - 17101806
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||    
T  17101849 ttgcaacagagcaagtttacctgtttttgattgcaaaaaagtaa 17101806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 17976642 - 17976717
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||||||||||| |||||||| |||| |||| |||| |||||| ||| | | | ||||| ||||||||||    
T  17976642 aagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtctacacatttcgcattacttattt 17976717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 24110742 - 24110675
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaa 87  Q
    |||| ||||| |||||||||| ||||||| |||||||| |||| |||| |||| || |||||||||||    
T  24110742 aatcatttaccaagtaataaaatgataagtagagtatcgtatccacaacgattttcattttgtccaaa 24110675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 18569210 - 18569275
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||||||| ||| |||||||||||||| ||||||| |||||||| || |||||| |||| |||||||    
T  18569210 ttgcaacatagcgagtttacttgtttt-ggttgcagaaaagtaagcagcggttacgattttttgaat 18569275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 15238815 - 15238896
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatt 105  Q
    |||||| |||||| ||| ||||||| ||| |||| |||| |||   |||||||||| ||| ||| |||||||||||||||||    
T  15238815 gtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 25226148 - 25226237
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    |||||||||  ||||||||||||||||||  ||||||| ||| ||||  |||| | ||||  |||||| |||| ||||||| ||||||||    
T  25226148 aatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgttacatattttta 25226237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 21301930 - 21302140
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  ||||||| ||| ||||||| |||||| ||||||||||||  ||| ||||||    
T  21301930 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagttacttatttttgtaaattgacg 21302029  T
Q  118 atataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    ||||||||||| ||| ||||||||| |||| ||||||||||    || |||||||||||||||||||| | |||||| ||||| |||| |||||| ||||    
T  21302030 atataataaaagatatgggttagagtgttggaatttttatc----tgtttgcaacagagcaagtttacctttttttgattgcagaaaaataaacagcggt 21302125  T
Q  218 taagattctttgaat 232  Q
    || ||||||| ||||    
T  21302126 taggattcttcgaat 21302140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 254
Target Start/End: Complemental strand, 17438512 - 17438287
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgacgatata 122  Q
    |||| |||| ||||| ||||||| ||||||||||||| |||  ||||||||||| ||||||| ||||| |||||||||||||  |||| |||||||||||    
T  17438512 ttaccaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgtaagtttgacgatata 17438413  T
Q  123 ataaaatataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaag 221  Q
    || ||||| |||| ||||| || ||||||||||||||    || |||||||||||||| ||||| || ||||||||||| |||||||| ||||||||| |    
T  17438412 at-aaata-aaggtttagaaagcttgcaatttttatc----tgtttgcaacagagcaattttacctg-ttttggttgcagaaaagtaagcaacggttagg 17438320  T
Q  222 attctttgaattccctctatttatattcttcga 254  Q
    |||||| |||| ||||||||||||||| |||||    
T  17438319 attcttcgaatcccctctatttatattgttcga 17438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 16245814 - 16245593
Alignment:
Q  22 tcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat 121  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||  |||| || ||| ||||||| ||||| ||||||||| |||||  ||||| |||     
T  16245814 tcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaattctcgttactta-ttttagtttgacaataa 16245716  T
Q  122 aataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    ||||||| |  ||||||||||||| ||||||||||||||| |    ||||||||||||||| |||| |||||||||||||| |||||||| || ||||||    
T  16245715 aataaaagagttaagggttagagatttgcaatttttatctat----ttgcaacagagcaag-ttacctgtttttggttgcagaaaagtaagcagcggtta 16245621  T
Q  220 agattctttgaattccctctatttatatt 248  Q
      |||||  ||| |||| |||||||||||    
T  16245620 gaattctccgaa-tccccctatttatatt 16245593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 41508379 - 41508587
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  |||||||||||||||| | ||| |||| ||||| |   ||||||||||| ||||||| |||| || |||||||||||||| ||||||||    
T  41508379 aatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcattacttatttttaatttgacgat 41508478  T
Q  120 ataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    | ||||||| |  ||||||||||||| ||||||||| ||||    || |||||||| |||||| |||| || ||||||||||| |||||||| || ||||    
T  41508479 aaaataaaagagttaagggttagagatttgcaatttgtatc----tgtttgcaacaaagcaag-ttacatg-ttttggttgcagaaaagtaaccagcggt 41508572  T
Q  218 taagattctttgaat 232  Q
    |||||||||||||||    
T  41508573 taagattctttgaat 41508587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 7478388 - 7478288
Alignment:
Q  54 tatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaatataagggttagagagttgcaattt 153  Q
    |||| |||| ||| |||||||||||| ||||||| ||||| |||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  7478388 tatcgtatccacattgattgtcgtttggtccaaacaattcacgttacttattttttagttgatgatataataaaatataagggttagagggttgcaattt 7478289  T
Q  154 t 154  Q
    |    
T  7478288 t 7478288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 20429726 - 20429908
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaag-ttgacgatata 122  Q
    |||||| |||||||||| ||||||| |||||||| |||||| || ||||||| |||  |||| | ||||||||||||||||||||||| |||||||||||    
T  20429726 gtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaattcgcgttacttatttttaagtttgacgatata 20429825  T
Q  123 ataaaata-taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||| | |||||||||||   ||||||||||||    | || ||||||||||||||||||| |   ||||||||||| ||||||||    
T  20429826 ataaaagagtaagggttagaagtttgcaattttta----tatgtttgcaacagagcaagttta-tctattttggttgcagaaaagtaa 20429908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 209
Target Start/End: Complemental strand, 3116501 - 3116321
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||||| ||||||||||||||||||  ||||||  |||| |||  ||||||||||| ||||||| ||||| ||||||||| |||||||||||||||| ||    
T  3116501 gtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttactta-ttttaagttgacgataaaa 3116404  T
Q  124 taaa-atataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||| | ||||||||| ||||| ||||||||||||||    || |||||||||||||||  ||| || ||||||||||| ||||||||    
T  3116403 taaagagataagggttaagagatttgcaatttttatc----tgtttgcaacagagcaag-atacctggttttggttgcagaaaagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 21303441 - 21303220
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| || ||||||| ||||||| |||||||| || | |||| |||||| ||||  |||||| ||||  ||||||||||||| |||||||| ||    
T  21303441 aatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttacttatttt-aagttgactat 21303343  T
Q  120 ataa--taaaatat--aagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||  ||||| |   |||||||||||| ||||||||||||||| |||||    ||||||||||||| ||||||||| ||||||| |||||||| || ||    
T  21303342 ataaaataaaagagtaaagggttagaga-ttgcaatttttatctgtttgc----aacagagcaagtt-acttgtttt-ggttgcagaaaagtaagcagcg 21303250  T
Q  216 gttaagattctttgaattccctctatttat 245  Q
    |||| |||| ||||||| ||| ||||||||    
T  21303249 gttaggattatttgaatcccccctatttat 21303220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 932751 - 932970
Alignment:
Q  17 atcaatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-tt 113  Q
    |||||||||||||||||||||||| ||||||  |||||||| |||| |||  ||||||| ||| ||||||| ||||| | |||||||||||  |||| ||    
T  932751 atcaatcgtttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttatttttataagttt 932850  T
Q  114 gacgatataataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaaca 212  Q
    |||| ||||  ||| |  |||| || | ||| || |||||||||    |||| ||||||||||||||||||||||| ||||||||||| |||||||| ||    
T  932851 gacgttata--aaagttaaaggtttaaaagacttacaattttta----tttgtttgcaacagagcaagtttacttg-ttttggttgcagaaaagtaagca 932943  T
Q  213 acggttaagattctttgaattccctct 239  Q
     ||||||  |||||| |||||||||||    
T  932944 gcggttagtattcttcgaattccctct 932970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 12805977 - 12805830
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacg-- 117  Q
    |||| ||||| |||||||||||||||||| ||||||||||||| |||  |||||||||||  |||||| |||| |||||||||| |||||||| ||||      
T  12805977 aatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgttactta-ttttaagtcgacgtt 12805879  T
Q  118 atataataaaatat--aagggttagagagttgcaatttttatctttttgc 165  Q
    ||| ||||||| ||  |||||||||||| ||||||||||||||| |||||    
T  12805878 ataaaataaaagattaaagggttagaga-ttgcaatttttatctgtttgc 12805830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 4650242 - 4650451
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacga 118  Q
    ||||| ||||| ||||||||||||||| || | |||||| |||| |||  ||||||| ||| | ||||| |||||||||||||||   ||||||||||||    
T  4650242 caatcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttactta---ttaagttgacga 4650338  T
Q  119 tataataaaatataagggtt--agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |   | ||||  ||||||||  | ||| ||||||||||||||    || ||||||| |||||||||||| || ||||||||||| |||||||| ||||||    
T  4650339 t---acaaaagttaagggttaaaaagacttgcaatttttatc----tgtttgcaacggagcaagtttacctg-ttttggttgcagaaaagtaagcaacgg 4650430  T
Q  217 ttaagattctttgaattccct 237  Q
    ||| ||||||| |||| ||||    
T  4650431 ttaggattcttcgaatcccct 4650451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 227
Target Start/End: Complemental strand, 19925699 - 19925505
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt---ttaagttgacgatataataaa 127  Q
    ||||||||| |||||| | |||||||| |||| |||  ||||||| ||| ||||||||||||||||||||||||||   ||||||| |||||   |||||    
T  19925699 aagtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttatttttattaagttaacgat---ataaa 19925603  T
Q  128 atataagggtt---agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagatt 224  Q
    || ||||||||   ||||| |||||||||     | | || |||||||||||||||||||| |||||| | ||||| |||||||| || |||||| ||||    
T  19925602 atttaagggttaaaagagacttgcaattt-----tatatgtttgcaacagagcaagtttacctgttttggtttgcagaaaagtaagcagcggttaggatt 19925508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 19171917 - 19171816
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacgatat 121  Q
    |||||| ||||||||||||||||||||||| |||||||  |||| ||||||||||| ||||||| |||| || |||||||||||  || |||||||||||    
T  19171917 gtttaccaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcattacttatttttgtaggttgacgatat 19171818  T
Q  122 aa 123  Q
    ||    
T  19171817 aa 19171816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 209
Target Start/End: Original strand, 5508359 - 5508532
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaa-at 129  Q
    ||||||||||||||||||  |||||| ||||| |||  ||||||||||| ||||||| |  |||||||||||| ||||||| |||||||| |||||| |     
T  5508359 aagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatctcgcgttactta-ttttaaggtgacgataaaataaagag 5508456  T
Q  130 ataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||||||||| ||||| ||| ||||||||||    || |||||| |||||||| |||| ||||||| |||||| ||||||||    
T  5508457 ataagggttaagagatttgaaatttttatc----tgtttgcaatagagcaag-ttacatgttttttgttgcagaaaagtaa 5508532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 2167698 - 2167557
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| |||||||||||||||||| |||||||| |||| |||   | |||||||| ||||||| ||||| | |||||||||||||  ||||| ||| ||||    
T  2167698 ttaccaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaattcacattacttatttttagtttgactataaaata 2167599  T
Q  126 aaata--taagggttagagagttgcaatttttatctttttgc 165  Q
    ||| |   || ||||||||| ||||||||||||||| |||||    
T  2167598 aaagagtaaatggttagagatttgcaatttttatctgtttgc 2167557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 7495129 - 7495048
Alignment:
Q  73 gtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaatataagggttagagagttgcaatttt 154  Q
    ||||||| ||||||| ||||  |||||||||||||| |||||| |||||||||||| |||||||| |||||||| |||||||    
T  7495129 gtcgtttcgtccaaacaattaacgttacttattttttagttgatgatataataaaagataagggtcagagagttacaatttt 7495048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 21325356 - 21325500
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat-- 121  Q
    |||||| |||||||||| ||||||| | |||||| |||| ||||  |||||||||| ||||||| |||| | |||||||| ||||||||| |||||||      
T  21325356 gtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttactta-ttttaagttaacgatataa 21325454  T
Q  122 aataaaa---tataagggttagagagttgcaatttttatctttttgc 165  Q
    |||||||   |  |||||||||||| ||||||||||||||| |||||    
T  21325455 aataaaagagttgaagggttagaga-ttgcaatttttatctatttgc 21325500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 22349421 - 22349509
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| || ||||||||||||||| |||||||| |||| |||   |||||||||| ||||||| ||||| | ||||||||||||    
T  22349421 aatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattttt 22349509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 12754872 - 12754796
Alignment:
Q  161 tttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    |||| |||||||||||| ||||||| || ||||||||||| |||||||| || |||||| ||||||| |||| ||||    
T  12754872 tttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttaggattcttcgaatcccct 12754796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 16229917 - 16229832
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    ||||||||||||||||| |||||    |||||||| | ||||| |||||||||||||| |||||||| || |||||| ||||||| ||||    
T  16229917 agttgcaatttttatctgtttgc----aacagagcgaatttacctgtttttggttgcaaaaaagtaagcagcggttaggattcttcgaat 16229832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 8765261 - 8765331
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    |||||||||||||||||||| |||||| ||||||| |||||||| || | |||||||||||| |||| ||||    
T  8765261 ttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcagcagttaagattcttcgaatcccct 8765331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 28728967 - 28729038
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactt 102  Q
    |||||||||||||||||| |||||||| |||| |||  |||||||||||   ||||| ||||||||||||||    
T  28728967 aagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttactt 28729038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 821601 - 821515
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||| |||||| ||  ||| |||||  |||||||||||    
T  821601 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaattcatgttacttattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 6289915 - 6289957
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatc 62  Q
    |||||||||| |||||||||||||||||| |||||||||||||    
T  6289915 aatcgtttaccaagtaataaagtgataagtagagtatcatatc 6289957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 12411169 - 12411251
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||| ||||||||||||||| || |||||||| |||| |||| ||||||||||| || |||| ||||   |||||||||||||    
T  12411169 ttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggttacttattttt 12411251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 8770030 - 8770119
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||| || |||||||||||||||||| | ||||||||||| |||  ||||||| |||||||  || |||||  |||||||| ||||    
T  8770030 caatcgttaaccaagtaataaagtgataagtaaagtatcatatccacatggattgtccttttgtctgaacaattcttgttacttagtttt 8770119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 8770163 - 8770235
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||||||||||| || ||||||||||| |||||||| || | |||| ||||||| |||| ||||||    
T  8770163 ttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaagcagcagttaggattcttcgaatcccctct 8770235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 8319050 - 8319153
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacga 118  Q
    ||||||||||| ||||||| |||||||||| ||| |||  |||| |||  |||| |||||| || |||| |||||  |||||||| ||||||||||| ||    
T  8319050 caatcgtttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaattcatgttactta-ttttaagttgatga 8319148  T
Q  119 tataa 123  Q
    |||||    
T  8319149 tataa 8319153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 19908319 - 19908528
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt----aagttga 115  Q
    |||||||||| || ||||||| ||||||| | |||||| |||| |||| | | ||||||| ||||||| ||||| ||| || |||||||    |  ||||    
T  19908319 aatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaattcacgtaacctattttttttcagtttga 19908418  T
Q  116 cgatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||||||   ||  ||||||||| |   ||| ||||||||| |||||||    |||| ||||||||||| | |||||||||||| |||||||| || |     
T  19908419 cgatataa---aagttaagggttaaaagattggaatttttatttttttgc----aacaaagcaagtttacctatttttggttgcagaaaagtaagcagca 19908511  T
Q  216 gttaagattctttgaat 232  Q
    |||| ||||||| ||||    
T  19908512 gttaggattcttcgaat 19908528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 12759403 - 12759458
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||| |||||||||||||||||| |||||||| |||| ||||  ||||||||||    
T  12759403 gtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgttt 12759458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 18736758 - 18736672
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| |||||||||||| ||||| ||| |||| ||||||||    ||||||||| ||| ||| || ||||||||||||||||    
T  18736758 aatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttcgtctaaacaactcgcgttacttatttt 18736672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 8557204 - 8557130
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||||||||||| |||||||| |||| |||  |||||||||||  |  ||| |||| |||||||||||||    
T  8557204 agtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 10917930 - 10918016
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| || ||||||||||||||| |||||||| |||| |||  |||||| |||| ||| ||| | ||||| |||| |||||    
T  10917930 aatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtctaaacagttcgcattacctattt 10918016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 21825955 - 21825870
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||||  |||||||||||| |||| |||||||| |||| |||  |||| | |||| ||||||| | ||||||||||||||||    
T  21825955 aatcgtttaccgagtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttacttattt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 27413838 - 27413780
Alignment:
Q  169 caacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctt 227  Q
    ||||||||| | ||||| |||||||||||||| |||||||| || |||||| |||||||    
T  27413838 caacagagcgattttacctgtttttggttgcagaaaagtaagcagcggttaggattctt 27413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 8170026 - 8170099
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||| ||| | ||||| |||||||||||||| |||||||  || |||||| ||||||| |||| ||||||    
T  8170026 ttgcaacatagcgaatttacctgtttttggttgcagaaaagtatgcagcggttaggattcttcgaatcccctct 8170099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 8889228 - 8889151
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||  |||| |||  ||||||| ||| || | || ||||| ||||||||||||||    
T  8889228 aagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttattttt 8889151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 10744914 - 10744951
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatc 57  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  10744914 aatcgtttaccaagtaataaagtgataagtagagtatc 10744951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 19909902 - 19909846
Alignment:
Q  181 tttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    ||||| ||||||| |||||| |||||||| || |||||| |||||||||||| ||||    
T  19909902 tttacctgttttttgttgcagaaaagtaagcagcggttaggattctttgaatcccct 19909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 9e-42; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 16365717 - 16365942
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||| | ||| |||||||| |||| |||  |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  16365717 aatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttatttttaagttgacgat 16365816  T
Q  120 ataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    ||||||||| |  ||||| ||||||| || ||||||| |||| ||||| |    | ||||||||| || |||||||||||||| |||||||| || ||||    
T  16365817 ataataaaagagttaaggtttagagattttcaattttgatctatttgcat----ctgagcaagtt-acatgtttttggttgcaaaaaagtaagcagcggt 16365911  T
Q  218 taagattctttgaattccctctatttatatt 248  Q
    || ||||||| ||||  || |||||||||||    
T  16365912 taggattcttcgaatctcccctatttatatt 16365942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 248
Target Start/End: Original strand, 5108583 - 5108801
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataat 124  Q
    ||||| ||||||||||||| |||| |||||||| |||| |||| ||||||||||| ||||||| ||||||    ||||||||||||||||||||||||||    
T  5108583 tttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgaac-acttatttttaagttgacgatataat 5108680  T
Q  125 aaaata-ta-agggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaaga 222  Q
    |||| | || | |||||||||||| |||||||||||    || |||||| |||||||||||||||| ||||||||||| |||||||| || |||||| ||    
T  5108681 aaaagagtatatggttagagagttacaatttttatc----tgtttgcaagagagcaagtttacttgattttggttgcagaaaagtaagcagcggttagga 5108776  T
Q  223 ttctttgaattccctctatttatatt 248  Q
    ||||||||| |||| |||||||||||    
T  5108777 ttctttgaa-tccccctatttatatt 5108801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 225
Target Start/End: Complemental strand, 3329740 - 3329542
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacgatata 122  Q
    ||||| |||||||||||||||||| |||||||| |||| |||  |||||||||||  |||||| |||  |||||||||||||||  ||||| |   ||||    
T  3329740 tttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgttacttatttttgtaagtttaacgtata 3329641  T
Q  123 ataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaaga 222  Q
    || ||| |||||||||||||||||||||||||||||| |||||    |||| |||||||||||||||||||||||||| |||||||| || |||||| ||    
T  3329640 atgaaagataagggttagagagttgcaatttttatctgtttgc----aacatagcaagtttacttgtttttggttgcagaaaagtaagcagcggttagga 3329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 2563830 - 2564016
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacg 117  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||| ||||||||||| ||||||| |||| | ||||||||||| |  ||||| |||    
T  2563830 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttatttctgtaagttcacg 2563928  T
Q  118 atataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||||||||||| |||||||||||||||||| ||||||||||    || |||||||||||||||||||| || ||| | ||||| ||||||||    
T  2563929 atataataaaagataagggttagagagttgaaatttttatc----tgtttgcaacagagcaagtttacctgctttagtttgcagaaaagtaa 2564016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 7318286 - 7318507
Alignment:
Q  21 atcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgata 120  Q
    ||||||||| |||||||||||||||||| |||||||| |||| |||  ||||||||||| ||| ||| |  |||| ||||||| ||||||||||||||||    
T  7318286 atcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagctcgcattactta-ttttaagttgacgata 7318384  T
Q  121 t--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |  ||||||  | |||||||||||||| ||||||||||||||    || ||||||||||||||| |||||| |||||||||||| ||||| ||||||||     
T  7318385 taaaataaaagagataagggttagaga-ttgcaatttttatc----tgtttgcaacagagcaag-ttacttctttttggttgcagaaaaggaaacaacga 7318478  T
Q  217 ttaagattctttgaattccctctatttat 245  Q
    ||| || |||||  | |||| ||||||||    
T  7318479 ttaggactcttttgaatccccctatttat 7318507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 15869607 - 15869831
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| ||||  ||| |||| | |||||||| ||||| |  |||||||||| |||||||||||||||    
T  15869607 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtctgcgttactta-ttttaagttgacgat 15869705  T
Q  120 at--aataaaat--ataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||||  ||||||||| |||| |||||| |||||||    || |||||| |||  ||| |||| |||||||||||||||||||||||||||||    
T  15869706 ataaaataaaatagataagggtttgaga-ttgcaa-ttttatc----tgtttgcaatagaaaaag-ttacctgtttttggttgcataaaagtaaacaacg 15869798  T
Q  216 gttaagattctttgaattccctctatttatatt 248  Q
    |||| || ||||||||| ||| || ||||||||    
T  15869799 gttaggactctttgaatcccccctgtttatatt 15869831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 8979093 - 8978868
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||| ||||| |||||||||||||||||| ||||||||||||| |||  |||||| |||| ||||||| ||||||| |||||||||||  |||| |||||    
T  8979093 aatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattttggtaagtttgac 8978994  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
     |||||| || ||| ||||||||| || |||||||||| |||    || |||||| ||| ||||||||| |||||||||||||| |||| ||| || | |    
T  8978993 aatataa-aagataaaagggttag-gatttgcaattttcatc----tgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagcagcag 8978900  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| |||||||| ||| |||||| ||||||||    
T  8978899 ttaggattctttaaatcccctctgtttatatt 8978868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 248
Target Start/End: Complemental strand, 39273258 - 39273038
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgacgata 120  Q
    ||||||||||||||||||||||||| |||||||| |||  | |  ||||||||||| |||||||||||| | ||||||||||||  |||| ||||||||     
T  39273258 gtttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgtaagtttgacgat- 39273160  T
Q  121 taataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
      ||||||  ||||||||| | |||||||| ||| |||| |    |||||||||||||||||||| | |||||||||||| |||||||| || ||||||     
T  39273159 --ataaaagttaagggttataaagttgcaaatttaatctat----ttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttag 39273066  T
Q  221 gattctttgaattccctctatttatatt 248  Q
    ||| ||| ||||  ||||| ||||||||    
T  39273065 gatccttcgaatctcctctgtttatatt 39273038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 12329694 - 12329802
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||| ||| ||||||  |||||||  |||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  12329694 aatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttttgcccaaataatccgcgttacttatttttaagttgacgat 12329793  T
Q  120 ataataaaa 128  Q
    |||||||||    
T  12329794 ataataaaa 12329802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 209
Target Start/End: Complemental strand, 7492338 - 7492164
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaata- 130  Q
    ||||||||| ||||||| |||||||| |||| |||| |||||| |||| || |||| |||| || |||||||||||||  |||| |||||||||||| |     
T  7492338 agtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttatttttattttgatgatataataaaagag 7492239  T
Q  131 -taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
     ||||||||||||| |||||||||||| |    || ||||||||||||||| |||| |||||||||||||| ||||||||    
T  7492238 ttaagggttagagatttgcaatttttaac----tgtttgcaacagagcaag-ttacctgtttttggttgcagaaaagtaa 7492164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 9731714 - 9731518
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  ||||| |||||||||||| |||||||| || | |||| ||||||||||| ||||||| |||||||||||||||||||||  |||| |||    
T  9731714 aatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttacttatttttagtttgatgat 9731615  T
Q  120 ataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
    | ||||||| |  || |  ||||||| ||||||||||||||| |     || |||| |||||| |||| ||||||||||||||||||||||| || ||||    
T  9731614 aaaataaaagagttacgaattagagatttgcaatttttatctat----gtgtaacatagcaag-ttacctgtttttggttgcataaaagtaagcagcggt 9731520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 248
Target Start/End: Original strand, 4785854 - 4786077
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aa 123  Q
    |||| |||||||||||||||||| ||||||||| ||| |||  ||||||||||| ||||||  | ||| |||||||||||||| ||||||||||||  ||    
T  4785854 ttaccaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt-agttgacgatataaaa 4785952  T
Q  124 taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaag 221  Q
    ||||| |  ||||||||||||| ||  ||||||| | | | |  |||||| |||||||| |||| |||||||||||||| |||||||| || |||||| |    
T  4785953 taaaagagttaagggttagagatttttaattttt-tttatctatttgcaatagagcaag-ttacctgtttttggttgcagaaaagtaagcagcggttagg 4786050  T
Q  222 attctttgaattccctctatttatatt 248  Q
    |||||| |||| ||  |||||||||||    
T  4786051 attcttcgaatccctcctatttatatt 4786077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 232
Target Start/End: Complemental strand, 1848303 - 1848106
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagtt-gacgatataataaa 127  Q
    |||||||||||||||||| | |||||| |||| ||   ||||||| ||| ||||||| |||| |||||||||||||||  ||||| ||||||||||  ||    
T  1848303 aagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttttgtaagtttgacgatataa--aa 1848206  T
Q  128 atataagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattct 226  Q
    || |||||||||||||| ||||||||||||||| ||||     |||||||||||||||| |||||| ||||||| |||||||| || |||||| ||||||    
T  1848205 at-taagggttagagagcttgcaatttttatctgtttga----aacagagcaagtttacctgtttt-ggttgcagaaaagtaagcagcggttatgattct 1848112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 10587111 - 10586897
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||  ||||||||||| ||| ||| || ||  |||||||| ||||||||| || ||    
T  10587111 aatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaactcatgttactta-ttttaagtttacaat 10587013  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | |||||||||| ||| ||||||||||||||    || |||||||||||||||  ||| ||||| |||||||| |||||||| ||  |    
T  10587012 ataaaataaaagaaataagggttaaaga-ttgcaatttttatc----tgtttgcaacagagcaag-atacatgtttctggttgcaaaaaagtaagcagtg 10586919  T
Q  216 gttaagattctttgaattccct 237  Q
    ||||||| ||||||||| ||||    
T  10586918 gttaagactctttgaatcccct 10586897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 3734613 - 3734829
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--a 122  Q
    ||||| |||||||||||||||||| |||||||| |||| |||   ||||| |||| ||||||| ||||| ||||||||| |||||||||||||||||  |    
T  3734613 tttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttactta-ttttaagttgacgatataaa 3734711  T
Q  123 ataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
    |||||| |  ||||||||| ||| |||||| |||||||    || ||||||||||||||| |||| || ||||||||||| |||||||| ||| |||||     
T  3734712 ataaaagagttaagggttaaaga-ttgcaaattttatc----tgtttgcaacagagcaag-ttacctg-ttttggttgcagaaaagtaagcaatggttag 3734804  T
Q  221 gattctttgaattccctctatttat 245  Q
    || |||||||||  || ||||||||    
T  3734805 gactctttgaatctcccctatttat 3734829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 13759947 - 13759859
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| || ||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||| | ||||||||||||||||||    
T  13759947 aatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttattttt 13759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 232
Target Start/End: Complemental strand, 17153237 - 17153032
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacg--atat 121  Q
    |||||| |||||| ||||||||||| |||||||| |||| |||  ||||||||||| ||| ||| |  |||||||||||| |||||||||||||  |||     
T  17153237 gtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagctcgcgttactta-ttttaagttgacgacataa 17153139  T
Q  122 aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    ||||||  | |||||||||||||| |||  |||||||||    || |||||||| |||||| |||| |||||||||||||| |||||||| || ||||||    
T  17153138 aataaaagagataagggttagaga-ttgttatttttatc----tgtttgcaacaaagcaag-ttacctgtttttggttgcagaaaagtaagcagcggtta 17153045  T
Q  220 agattctttgaat 232  Q
     || |||||||||    
T  17153044 tgactctttgaat 17153032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 9864409 - 9864327
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||| ||| ||| |||| |||||||||||||    
T  9864409 gtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgttacttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 19153310 - 19153493
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| |||||||||||||||||   |||||||| |||  || || |||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  19153310 aatcttttaccaagtaataaagtgataaat-gagtatcacatccgca-tggttgtcgttttgtccaaataactcgcgttacttatttt-aaggtgacgat 19153406  T
Q  120 ataataaa-atataagggtta-gagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    | |||||| | |||||||||| | || ||||||||||||||| |||||    |||| | |||||| || |||||||||||||| ||||||||    
T  19153407 aaaataaagagataagggttaagggatttgcaatttttatctgtttgc----aacataacaagtt-acctgtttttggttgcagaaaagtaa 19153493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 20752709 - 20752892
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| |||||||||||||||||   |||||||| |||  || || |||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  20752709 aatcttttaccaagtaataaagtgataaat-gagtatcacatccgca-tggttgtcgttttgtccaaataactcgcgttacttatttt-aaggtgacgat 20752805  T
Q  120 ataataaa-atataagggtta-gagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    | |||||| | |||||||||| | || ||||||||||||||| |||||    |||| | |||||| || |||||||||||||| ||||||||    
T  20752806 aaaataaagagataagggttaagggatttgcaatttttatctgtttgc----aacataacaagtt-acctgtttttggttgcagaaaagtaa 20752892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 2350834 - 2350692
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| |||||||||| || |||| ||| |||| |||| |||  ||||||||||||||||||||||| |||||||  ||||||||  |||| |||    
T  2350834 aatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaataatccgcgttaaatatttttagtttgaagat 2350735  T
Q  120 ataataaaata---taagggttagagagttgcaatttttatct 159  Q
    | |||||||||    |||||||||||| || ||||||||||||    
T  2350734 aaaataaaatagttaaagggttagagattttcaatttttatct 2350692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 1587693 - 1587854
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||  ||| || ||||  |||||| |||||||||||| || ||||   ||||||||    
T  1587693 aatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaattcgcgttaccta-ttttgttttgacgat 1587791  T
Q  120 at--aataaaata-taagggttagagag-ttgcaatttttatctttttgcttgcaacagagcaagtt 182  Q
    ||  ||||||| | | |||||||||||| ||||||||||||    |||| |||||||||||||||||    
T  1587792 ataaaataaaagatttagggttagagagattgcaattttta----tttgtttgcaacagagcaagtt 1587854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 8054145 - 8053926
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||  |||||||| |||| |||   |||||||||   |||||| ||||| | |||||||||||  ||||||||||    
T  8054145 aatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttatttttgtaagttgacg 8054049  T
Q  118 atataataaaatataagggtt-agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||   |||||| ||||| ||| | ||| ||| || |||||||| |    |||||| | ||||||||||| || ||||||||||| |||||||| || | |    
T  8054048 at---ataaaagataagagttaaaagacttgtaaattttatctat----ttgcaatatagcaagtttacctg-ttttggttgcagaaaagtaagcagcag 8053957  T
Q  217 ttaagattctttgaattccctctatttatat 247  Q
    ||| |||||||||||| |||||| |||||||    
T  8053956 ttaggattctttgaatcccctctgtttatat 8053926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 18662453 - 18662539
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| ||| | |||||||||||| |||||||| |||| |||| ||||||||||| ||||||| ||||| ||||||||||||    
T  18662453 aatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 4818854 - 4818950
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||| |||||||||||||||||| ||||||||| ||| |||  ||||||||||| ||||||  | ||| |||||||||||||| ||||||||||||||    
T  4818854 ttaccaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttattttt-agttgacgatataa 4818950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 11803103 - 11803180
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| ||||||| ||||||||||||||||||||    
T  11803103 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttattttt 11803180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 9574419 - 9574521
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||| |||||||||||||| |||||||| ||||||||  |||||| |||| ||| |||  | |||||||| ||| |||||||||||||||    
T  9574419 aatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgactcgcgttattta-ttttaagttgacgat 9574517  T
Q  120 ataa 123  Q
    ||||    
T  9574518 ataa 9574521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 31492942 - 31493029
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| | |||||||||||||||| |||||||| |||| |||  ||||||||||||||||||| |||| |  |||||||||||    
T  31492942 aatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatttgttttacttatttt 31493029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 4579110 - 4579195
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||||||||||||| |||||||| |||||||| |||| | |  ||||||| ||||||||||| |||||| |||||||||||    
T  4579110 aatcgtttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgttacttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 8054576 - 8054471
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| || ||||||||||||||| |||||||| |||  |||   |||||||||| ||||||| |||||  ||||||||||||  ||||||||||    
T  8054576 aatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttatttttgtaagttgacg 8054477  T
Q  118 atataa 123  Q
    ||||||    
T  8054476 atataa 8054471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 232
Target Start/End: Complemental strand, 18369063 - 18368857
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgac-gata 120  Q
    |||||| |||||||||||||||||| |||||||  |||| | |  ||||||||||| ||||||| |||||  ||||||||||||  |||||||||  |||    
T  18369063 gtttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttatttttataagttgacaaata 18368964  T
Q  121 taataaaatataagggttagagagt--tgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtt 218  Q
    ||| || ||| |||||||||| |||  |||||||||||||    || |||||||| |||||| |||| || ||||||||| | ||||||||  |||||||    
T  18368963 taa-aagata-aagggttagaaagtcgtgcaatttttatc----tgtttgcaacaaagcaag-ttacctgcttttggttgtagaaaagtaagaaacggtt 18368871  T
Q  219 aagattctttgaat 232  Q
    | ||||| ||||||    
T  18368870 aggattccttgaat 18368857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 1584555 - 1584662
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacga 118  Q
    ||||| ||||| ||||||||||||||||||  ||||||| |||| |||  |||||| |||| ||| ||| || |||||||||||| ||||||||||||||    
T  1584555 caatcatttaccaagtaataaagtgataag-tgagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgttactta-ttttaagttgacga 1584652  T
Q  119 tataataaaa 128  Q
    || |||||||    
T  1584653 taaaataaaa 1584662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 11221251 - 11221163
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    ||||||||||||||||||||| ||||||| |||||||  |||| |||  ||||||||||| ||  ||| |||| |||||||||||||||    
T  11221251 aatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattttt 11221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 3191146 - 3191044
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    ||||||||| | ||||||||||||| ||| | ||||| ||||||| |  ||||||||||| ||||||| |||||| |||| ||| ||||||||||| |||    
T  3191146 aatcgtttatttagtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaattcgtgttattta-ttttaagttgaggat 3191048  T
Q  120 ataa 123  Q
    ||||    
T  3191047 ataa 3191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 4986567 - 4986713
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||| | || |||||||  || | |||  ||||||||||| ||| |||||  |||||||||||| |||||||||||||||    
T  4986567 aatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttactta-ttttaagttgacgat 4986665  T
Q  120 ataataaaata----taagggttagagagttgcaatttttatctttttg 164  Q
    | || | || |    ||||||||||||| ||||||||||||||| ||||    
T  4986666 aaaaaataaaagtgttaagggttagaga-ttgcaatttttatctgtttg 4986713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 4990665 - 4990811
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||| | || |||||||  || | |||  ||||||||||| ||| |||||  |||||||||||| |||||||||||||||    
T  4990665 aatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttactta-ttttaagttgacgat 4990763  T
Q  120 ataataaaata----taagggttagagagttgcaatttttatctttttg 164  Q
    | || | || |    ||||||||||||| ||||||||||||||| ||||    
T  4990764 aaaaaataaaagtgttaagggttagaga-ttgcaatttttatctgtttg 4990811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 6042473 - 6042676
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| | |||||||| || |||| |||||||| |||| |||  | ||||||||| || |||| |||| ||||||||||||||||  |||||| |    
T  6042473 aatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgttacttatttttagtttgacggt 6042571  T
Q  120 ataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
    |||||||||       | ||||  |||||||||||||    | || ||||||||||| |||||||| | |||||||||||| |||| ||| || ||||||    
T  6042572 ataataaaa-------gataga-tgttgcaattttta----tatgtttgcaacagag-aagtttacctttttttggttgcagaaaaataagcagcggtta 6042658  T
Q  220 agattctttgaattccct 237  Q
     |||||||||||| ||||    
T  6042659 ggattctttgaatcccct 6042676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 12181620 - 12181759
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgt-ccaaataattcgcgttacttatttttaagttgacga 118  Q
    |||||||||  |||||||||||||| ||| |||||| | |||| |||   |||||||||| || ||||| |||||| |||||||| ||||||||||||||    
T  12181620 aatcgtttataaagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaattcgagttactta-ttttaagttgacga 12181718  T
Q  119 tataataaaa---tataagggttagagagttgcaattttta 156  Q
    || | |||||   |  |||||||||||| ||||||||||||    
T  12181719 taaattaaaagagttgaagggttagagatttgcaattttta 12181759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 16058977 - 16058904
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||||| ||||||||||||||||||||  ||||||| || | |||| ||||||| |||| ||||||    
T  16058977 ttgcaacagagcaaatttacttgtttttggttgcagtaaagtaagcagctgttaggattcttcgaatcccctct 16058904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 20582271 - 20582476
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agttgacg 117  Q
    |||||||||| || |||||||||||||||    ||||| |||| |||  ||| |||||||  |||| | ||||| ||||||||| |||||  ||||||||    
T  20582271 aatcgtttaccaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttcttccatacaattctcgttacttaattttataagttgacg 20582367  T
Q  118 atataataaaatataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||||   ||  ||||||||| | ||  ||||||||||||||| |||||    |||||||||||||||| || ||||||||||| |||||||| || |     
T  20582368 atataa---aaggtaagggttaaaaagatttgcaatttttatctatttgc----aacagagcaagtttacctg-ttttggttgcagaaaagtaagcagca 20582459  T
Q  216 gttaagattctttgaat 232  Q
    |||| ||||||| ||||    
T  20582460 gttaggattcttcgaat 20582476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 23100039 - 23099966
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattc 93  Q
    |||||||||| || ||||||||||||||| |||||||| |||| |||  ||||||||||| ||||||| |||||    
T  23100039 aatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattc 23099966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 247
Target Start/End: Original strand, 8877444 - 8877657
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agttgacgatataataaaa 128  Q
    ||||||||| |||||||| |||||||| |||| |||  ||||| | ||||||| ||| ||||| |  ||||||||||||  |||||||  |||||   ||    
T  8877444 aagtaataaggtgataagtagagtatcgtatccacatggattgcccttttgtcgaaacaattctctgtacttatttttataagttgacagtataa---aa 8877540  T
Q  129 tataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaa-agtaaacaacggttaagattc 225  Q
      ||||||||| | |   ||||||||||||||| |||||    |||||||||||||||| | |||| ||||||| ||| ||||| || |||||| |||||    
T  8877541 gttaagggttaaaaaaacttgcaatttttatctgtttgc----aacagagcaagtttacctatttt-ggttgcaaaaatagtaagcagcggttaggattc 8877635  T
Q  226 tttgaattccctctatttatat 247  Q
    ||||||| |||||||| |||||    
T  8877636 tttgaatcccctctatatatat 8877657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 7397317 - 7397372
Alignment:
Q  187 tgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatt 242  Q
    |||||||||||||| |||||||| || |||||| ||||||| ||||||||||||||    
T  7397317 tgtttttggttgcagaaaagtaagcagcggttaggattcttcgaattccctctatt 7397372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 10648590 - 10648677
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| |||||||||||||||||  ||||||||||||   ||  |||||||||||  || ||| |||||| ||||||||||||    
T  10648590 aatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttt 10648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 10584573 - 10584487
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||  |||||||||||||||||||| |||||| |||| |||  |||||||||||  |  ||| |||||| |||||||||||    
T  10584573 aatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 9131038 - 9131131
Alignment:
Q  134 gggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||||||||| |||||||||||||    ||| |||||| |||||||||| ||| ||||||||||||| |||||||| |  |||||| ||||||| ||||    
T  9131038 gggttagagatttgcaatttttat----ttgtttgcaatagagcaagttaact-gtttttggttgcaaaaaagtaagctgcggttaggattcttcgaat 9131131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 13418659 - 13418756
Alignment:
Q  144 gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctattt 243  Q
    |||||||||||||||| |||||    |||||||||||||||| || ||||| |||||  ||||||| || |||||| |||||||||||| | |||||| |    
T  13418659 gttgcaatttttatctgtttgc----aacagagcaagtttacctg-ttttgattgcagcaaagtaagcagcggttaggattctttgaatccactctatat 13418753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 245
Target Start/End: Original strand, 6013624 - 6013825
Alignment:
Q  39 aagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aataaaata--taag 134  Q
    |||||||||| |||||||| |||| |||| |||| || |||| |||||| |||| || ||||||| |||||  |||| |||||  ||||||| |   |||    
T  6013624 aagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttactta-ttttagtttgatgatataaaataaaagagtaaag 6013722  T
Q  135 ggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattc 234  Q
    |||||| || |||||||||||   | |||| |||||||| ||||| ||||| ||  |||||||||| |||||| | ||||||||| || |||||||| ||    
T  6013723 ggttagcga-ttgcaattttt---tatttgtttgcaacaaagcaa-tttacatg--tttggttgcagaaaagtgagcaacggttatgactctttgaa-tc 6013814  T
Q  235 cctctatttat 245  Q
    |||||||||||    
T  6013815 cctctatttat 6013825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 10937614 - 10937673
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||||||| |||||||||||||||||| | |||||| |||| |||  |||||||||||    
T  10937614 aatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgttt 10937673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 16306717 - 16306792
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||||||||||| |||||||| ||||||||| |||| || |||  || ||| |||| || ||||||||||    
T  16306717 aagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatttgcattacttattt 16306792  T

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Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 9245193 - 9245279
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||| ||| || ||||||||||||| |||| |||  ||||||| ||| ||  ||| |||||| |||||||||||    
T  9245193 aatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttacttattt 9245279  T

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Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 21227191 - 21227237
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctaca 66  Q
    |||| ||||| |||||||||||||||||| |||||||| ||||||||    
T  21227191 aatcatttacaaagtaataaagtgataagtagagtatcgtatctaca 21227237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 4449003 - 4449080
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| | |||||  |||| |||  || |||| ||||||||||| |||||  |||||||||||||    
T  4449003 aagtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaattcttgttacttattttt 4449080  T

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Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 4449146 - 4449195
Alignment:
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||| ||||||||||| ||||||  ||||||||||| ||||||    
T  4449146 ttttggttgcaaaaaagtaaacagcggttagaattctttgaatcccctct 4449195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 11803224 - 11803296
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||||||||||| || ||||||||||| | |||||| || |||||| |||| || |||| ||||||    
T  11803224 ttgcaacagagcaagtttacctg-ttttggttgcagagaagtaaccagcggttaggattattcgaatcccctct 11803296  T

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Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 17203047 - 17203123
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||| ||||| |||||||| |||  ||   ||||||||||| ||||||| ||| ||||||||||||||||    
T  17203047 aagtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttattttt 17203123  T

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Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 21102374 - 21102321
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||| |||||||||||||||||| |||||||  |||  ||||||||||||||||    
T  21102374 ttaccaagtaataaagtgataagtagagtattgtattcacaatgattgtcgttt 21102321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 22339381 - 22339312
Alignment:
Q  37 taaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||||| | ||||||  |||  ||| ||||||||||| ||||||| ||||||| ||||||||||    
T  22339381 taaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgccttacttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 10584401 - 10584349
Alignment:
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatt 242  Q
    ||||||||||| ||| || | ||||||||| |||| |||||||||||||||||    
T  10584401 ttttggttgcagaaatgttagcaacggttatgattttttgaattccctctatt 10584349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 13418544 - 13418651
Alignment:
Q  19 caatcgtttactaagtaataaa-gtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttactta--tttttaagttga 115  Q
    |||||||| || |||||||||| |||||||| |||||||| |||| | |  ||||||| ||| ||||||| | ||  |||||||||  ||||||||||||    
T  13418544 caatcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttatttttttaagttga 13418643  T
Q  116 cgatataa 123  Q
    || |||||    
T  13418644 cggtataa 13418651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 17216829 - 17217027
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttact--tatttttaagttgacg 117  Q
    |||||||||| ||| |||||||||||||| ||||||||||||| |||  ||||||||||| ||||||| ||||| |||||||  ||||| |||||||| |    
T  17216829 aatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatatttgtaagttgatg 17216928  T
Q  118 atataat--aaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    |||||||  || ||| |||||||||| ||||||||||||||||    || |||||||||||||||||||| || ||||||||| | |||||||| |||||    
T  17216929 atataatacaagataaaagggttagaaagttgcaatttttatc----tgtttgcaacagagcaagtttacatg-ttttggttgtagaaaagtaagcaacg 17217023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 13908866 - 13909075
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt---aagttgac 116  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||| ||||||||||| ||||||| |||||| |||||||||||||   |  |||||    
T  13908866 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttttgtaattttgac 13908965  T
Q  117 gatataataaaatataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    |||||    |||  ||| ||||||| ||  ||||||||||||||    || |||||||||||||||||||| |||||||||||||| |||||||| || |    
T  13908966 gatat----aaaagtaaaggttagaaagtcttgcaatttttatc----tgtttgcaacagagcaagtttacctgtttttggttgcaaaaaagtaagcagc 13909057  T
Q  215 ggttaagattctttgaat 232  Q
    ||||| ||||||||||||    
T  13909058 ggttaggattctttgaat 13909075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 13128961 - 13128774
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta-agttgacga 118  Q
    |||||||||| |||||||||| ||||||| |||||||  |||| | |  ||||||||||| ||||||| || |||||||||||||||||  ||||||| |    
T  13128961 aatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttacttatttttttagttgacca 13128862  T
Q  119 tataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgttttt-ggttgcataaaagtaa 209  Q
    |||||||||| |||||||||||||||||||||||||||    |||| ||| ||||||| |||||| | ||||||| ||||||| ||||||||    
T  13128861 tataataaaagataagggttagagagttgcaattttta----tttgtttggaacagagtaagtttgcctgtttttcggttgcagaaaagtaa 13128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 17337210 - 17336997
Alignment:
Q  32 agtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaatat 131  Q
    |||||||| |||||||| |||||||| |||| | |  ||||||| ||| ||||||| |||| |||||||||||||||| |||||||||||||||||| |     
T  17337210 agtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttattttta-gttgacgatataataaaagag 17337112  T
Q  132 --aagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttg 229  Q
      ||||||| |||| ||||||||||||||| ||| |    |||||||||||||||| ||||||||||||||||||||||| ||  | ||| ||||||| |    
T  17337111 taaagggtttgagatttgcaatttttatctgtttac----aacagagcaagtttacctgtttttggttgcataaaagtaagcagagattatgattcttcg 17337016  T
Q  230 aattccctctatttatatt 248  Q
    ||| |||  ||||||||||    
T  17337015 aatcccccttatttatatt 17336997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 14648907 - 14649115
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| || | |||||||||||  || |||||  ||| |||||||| |||||||||||||||    
T  14648907 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccac-aggattgtcgtttcttctaaatagctcgtgttactta-ttttaagttgacgat 14649004  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | |||||||||||||| || |||||||||||    || ||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  14649005 ataaaataaaagacataagggttagaga-tttcaatttttatc----tgtttgcaacagagcaag-ttacttgtttttggttgtagaaaaggaaacaacg 14649098  T
Q  216 gttaagattctttgaat 232  Q
    |||| || |||||||||    
T  14649099 gttaggactctttgaat 14649115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 15164779 - 15164963
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagtt-gac 116  Q
    |||||||||| ||||||| || | |||||||||||||| |||| |||  ||||||| ||| ||||||| |||| |||||||||||||||  ||||| |||    
T  15164779 aatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttatttttgtaagtttgac 15164878  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||||   ||  ||||||||||||||||||||||||||    |||| |||||||||||||||||||| || ||||||||||| ||||||||    
T  15164879 gatataa---aagttaagggttagagagttgcaattttta----tttgtttgcaacagagcaagtttacctg-ttttggttgcagaaaagtaa 15164963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 7582309 - 7582534
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||| ||||| |||||||||||||||||| ||||||||||||| |||  |||||| |||| ||||||| |||  || |||||||||||  |||| |||||    
T  7582309 aatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttattttggtaagtttgac 7582408  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||||||| || ||| |||| |||| || |||||||||| |||    || |||||| ||| ||||||||| |||||||||||||| |||| ||| ||  ||    
T  7582409 gatataa-aagataaaaggcttag-gatttgcaattttcatc----tgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagcagtgg 7582502  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| |||||||||||| |||||| ||||||||    
T  7582503 ttaggattctttgaatcccctctgtttatatt 7582534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 248
Target Start/End: Complemental strand, 24639535 - 24639324
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| |||||||||||||||||| |||||||| |||| |||  |||| |||||||||||||| |||| |       ||  ||| ||||||||||||||||    
T  24639535 ttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatttg-------taacttttagttgacgatataata 24639443  T
Q  126 aaatat--aagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagat 223  Q
    |||||   |||||||||||| ||| ||||||      |||| |||||||||||||||||||| |||||| ||||||| |||||||| ||  ||||| |||    
T  24639442 aaatagtaaagggttagagatttgtaatttta-----tttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaagcagtggttaggat 24639348  T
Q  224 tctttgaattccctctatttatatt 248  Q
    |||||||| ||||||||||||||||    
T  24639347 tctttgaa-tccctctatttatatt 24639324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 19562265 - 19562046
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt-aagtt-gacg 117  Q
    |||| ||||| |||||||||||||||||| | |||||| | || ||||  ||||||||||  |||||| |||| |  |||||||||||| ||||| |||     
T  19562265 aatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatttgtattacttattttttaagtttgaca 19562166  T
Q  118 atataataaaatataa--gggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
     |||||||||| ||||  ||||||   | ||||||||||||||| |||||    |||||||||||||||| |||||||||||||| |||||||| || ||    
T  19562165 ttataataaaagataaaagggttatttaattgcaatttttatctctttgc----aacagagcaagtttacctgtttttggttgcagaaaagtaatcagcg 19562070  T
Q  216 gttaagattctttgaattccctct 239  Q
    ||||  |||||| |||| ||||||    
T  19562069 gttagaattcttcgaatcccctct 19562046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 13692756 - 13692668
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||  ||||||||||| | ||||| |||||| |||||||||||||    
T  13692756 aatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttacttattttt 13692668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 194
Target Start/End: Complemental strand, 16730486 - 16730316
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    ||||| |||| ||| || ||||||||||| |||||||| |||| | || |||| |||||| ||||||| || ||||||||||||||||  |||| |||||    
T  16730486 aatcgcttacgaagaaagaaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttatttttgtaagtttgac 16730387  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttg 194  Q
     ||   ||||||  ||||||||||| ||||||||||||||||    || |||||||||||||||||||| ||||||||    
T  16730386 aat---ataaaagttaagggttagaaagttgcaatttttatc----tgtttgcaacagagcaagtttacctgtttttg 16730316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 20315012 - 20315098
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||| ||||||| ||| ||||||||| |||| ||||||||||| ||||||| |||| |||||||||||||    
T  20315012 aatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 19492787 - 19492574
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| ||||||||||| |||||| |||||||| |||| ||||  ||||||||||  |||||| |||||||||||||||||||  || ||||||     
T  19492787 aatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttatttttgtaggttgac- 19492689  T
Q  118 atataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggt 217  Q
             |||||||  |||||   |||||||| ||||    |||| |||||||| ||||||||||| |||||||||||||| |||||||| |  ||||    
T  19492688 ---------aatataaaagttag---gttgcaatattta----tttgtttgcaacacagcaagtttacatgtttttggttgcagaaaagtaagcggcggt 19492605  T
Q  218 taagattctttgaattccctctatttatatt 248  Q
    || ||||||| |||| ||| || ||||||||    
T  19492604 taggattcttcgaatcccccctgtttatatt 19492574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 12578353 - 12578251
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| || ||||||||||||||  |||||||| |||| |||  ||||||||||||||||||| |||| ||||| |||| |||||||||||||||    
T  12578353 aatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttctta-ttttaagttgacgat 12578255  T
Q  120 ataa 123  Q
    ||||    
T  12578254 ataa 12578251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 17672014 - 17672174
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||  |||| |||  |||||| |||| ||| ||| || |||||||||||||||| ||||| |||||    
T  17672014 aatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaactcgcgttacttatttt-aagttaacgat 17672112  T
Q  120 ataa--taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtt 182  Q
    ||||  ||||| |  ||| ||||||||| ||||||||||||||| |||||    |||||||||||||    
T  17672113 ataaaataaaagagttaaaggttagaga-ttgcaatttttatctgtttgc----aacagagcaagtt 17672174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 5679217 - 5679363
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||||||||||| || |||||||| ||||||||   | | | |||| ||||||| ||||||||||||||| ||||||||| |||||    
T  5679217 aatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttactta-ttttaagttaacgat 5679315  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttatctttttg 164  Q
    ||  ||||||| |  ||||||||||| | ||||||||||||||| ||||    
T  5679316 ataaaataaaagagttaagggttagaca-ttgcaatttttatctgtttg 5679363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 19882652 - 19882738
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||  ||||||||||||||| || |||||||| |||| |||  ||||||||||| ||||||| ||||||||||||||||||    
T  19882652 aatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 19929762 - 19929549
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| ||||| |||||| ||||||||||  |||||||| |||| |||  ||||||||||| ||| |||||   || |||||||| |||||||||||| ||    
T  19929762 aatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcccgtgttactta-ttttaagttgacaat 19929664  T
Q  120 at--aataaa--atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||  ||||||  | |||||||||| ||| || |||||||||||    || ||||||||||||||  |||| |||||||||||||| ||||| |||||||     
T  19929663 ataaaataaaagagataagggttaaaga-tttcaatttttatc----tgtttgcaacagagcaa-attacatgtttttggttgcagaaaaggaaacaaca 19929570  T
Q  216 gttaagattctttgaattccc 236  Q
    |||| || ||||| |||||||    
T  19929569 gttaggactctttaaattccc 19929549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 21323962 - 21323874
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| || |||||| ||||| || |||||||| |||| |||  ||||||||||| ||||||| ||||||||||||||||||||    
T  21323962 aatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgttacttattttt 21323874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 20829825 - 20829640
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagtt-gacga 118  Q
    |||||||||| ||||||||||||||||| | ||||||  |||| |||| |||||| |||| || |||| |||| || ||||||||||| ||||| |||||    
T  20829825 aatcgtttaccaagtaataaagtgataa-ctgagtattgtatccacaaggattgttgtttcgttcaaaaaatttgcattacttatttt-aagttcgacga 20829728  T
Q  119 tataataaaat-ataagggtta-gagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    || |||||||  |||||||||| |||| || |||||||||||| |||||     ||| |||||||| ||||||||||||||||| ||| ||||    
T  20829727 taaaataaaaagataagggttaagagatttacaatttttatctgtttgcg----acatagcaagtt-acttgtttttggttgcagaaatgtaa 20829640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 25121312 - 25121227
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| ||||||||||||| |||| | |||||| |||| |||| |||||| |||| ||||||| ||||||||||||||||||    
T  25121312 aatcgtttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttacttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 11490555 - 11490631
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||||||||||| |||||||| |||| |||  |||||| ||||  |||||| |||||||||||||||||||    
T  11490555 aagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttacttatttt 11490631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 13992959 - 13992879
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttat 104  Q
    |||||| ||||||||||||| |||| |||||||| |||| |||  |||| |||||||||||||| |||||| |||||||||    
T  13992959 gtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaattcgtgttacttat 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 19092318 - 19092448
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aataaa- 127  Q
    |||||||||||||||||| ||||||||  ||  |||  ||||||||||| ||||||| || || |||| |||| |||||||||||||||||  ||||||     
T  19092318 aagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaactcacgttgctta-ttttaagttgacgatattaaataaaa 19092416  T
Q  128 -atataagggttagagagttgcaatttttatct 159  Q
     | ||||| |||||||| |||||||||||||||    
T  19092417 gagataagagttagaga-ttgcaatttttatct 19092448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 13992077 - 13992029
Alignment:
Q  108 taagttgacgatataataaaatataagggttagagagttgcaattttta 156  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  13992077 taagttgacgatataagaaaagataaggtttagagagttgcaattttta 13992029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 19636667 - 19636548
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| ||||||||||||| |||| |||||||  |||||| |  |||||||||||  |||||| |||||  |||||||||||| |  ||||||||| ||||    
T  19636667 ttacaaagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaattcatgttacttattttaagtttgacgataaaata 19636568  T
Q  126 aaata--taagggttagaga 143  Q
    ||| |  |||||||||||||    
T  19636567 aaagagttaagggttagaga 19636548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 8969803 - 8969674
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataat 124  Q
    ||||| ||||||||||||| |||| |||| | | |||||||   ||||||||||| ||||||| |||||| ||||||||||||    |||||||||||||    
T  8969803 tttacaaagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttacttattttgtt-ttgacgatataat 8969706  T
Q  125 aaaatataagggttagagagttgcaatttttatct 159  Q
    |||   ||||||||||||| ||||||||| |||||    
T  8969705 aaa--ttaagggttagaga-ttgcaatttatatct 8969674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 12406654 - 12406575
Alignment:
Q  159 tttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctc 238  Q
    |||||| |||||| ||||| | ||||| ||||||||||||||  |||||||||| |||||| ||||||| |||| |||||    
T  12406654 tttttgtttgcaatagagcgaatttacctgtttttggttgcaggaaagtaaacagcggttaggattcttcgaatcccctc 12406575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 17709769 - 17709951
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||||||||| |||||||||||||||||| |||||||  |||| | |  ||||||  |||||||   | ||||| |||||||||||||  ||| ||||||    
T  17709769 aatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgttcttttgtc---acaattctcgttacttatttttataatttgacg 17709865  T
Q  118 atataataaaatataagggtt--agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||   |||||| |||||||||  | ||| ||| ||||||||    | || |||||||||||||||||||| || ||||||||||| ||||||||    
T  17709866 at---ataaaagataagggttaaaaagacttgaaattttta----tatgtttgcaacagagcaagtttacctg-ttttggttgcaaaaaagtaa 17709951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 15047140 - 15047199
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||||||| |||||||||||||||||| |||| ||| ||||||||  |||| ||||||    
T  15047140 aatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgttt 15047199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 15107284 - 15107225
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||||||| |||||||||||||||||| |||| ||| ||||||||  |||| ||||||    
T  15107284 aatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgttt 15107225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 17026288 - 17026217
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    ||||||||||| || ||||| |||||||||||||| | |||||| || |||||| ||||||| |||| ||||    
T  17026288 ttgcaacagagtaaatttacctgtttttggttgcagacaagtaagcagcggttaggattcttcgaatcccct 17026217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 22176049 - 22175911
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  |||||||||||||||||| |||||||  |||| | |  ||||||| |||| |||||| |||||||| || ||| |||| |||||| |||    
T  22176049 aatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcg-taatta-ttttgagttgatgat 22175952  T
Q  120 at--aataaaata--taagggttagagagttgcaatttttat 157  Q
    ||  ||||||| |  ||||||||||||| |||||||||||||    
T  22175951 ataaaataaaagagttaagggttagaga-ttgcaatttttat 22175911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 11935237 - 11935293
Alignment:
Q  191 tttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatat 247  Q
    |||||||||| |||||||| ||  ||||| ||||||| |||| ||||||||||||||    
T  11935237 tttggttgcagaaaagtaatcagtggttaggattcttcgaatcccctctatttatat 11935293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 13692618 - 13692582
Alignment:
Q  173 agagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  13692618 agagcaagtttacctgtttttggttgcagaaaagtaa 13692582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 248
Target Start/End: Original strand, 40227849 - 40228011
Alignment:
Q  82 tccaaataattcgcgttacttatttttaagttgacgatataataaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaa 179  Q
    |||||| |||||||||||||||||||||  |||||||||  |||||| |   ||||| |||||  || |||||||||||    || ||||||| ||| ||    
T  40227849 tccaaacaattcgcgttacttatttttagtttgacgataatataaaagagtaaagggctagaggtttacaatttttatc----tgtttgcaacggagtaa 40227944  T
Q  180 gtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    |||||| | ||||| |||||  |||| ||| || |||||| ||||| ||||| |||| |||||||||||    
T  40227945 gtttacctattttttgttgccgaaaaataagcagcggttaggattc-ttgaa-tccccctatttatatt 40228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 168385 - 168177
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| |||||||||||||||||| |||||||| |||| |||  |||||||||||  || |||||  ||| |||||||||||| |||||||||||    
T  168385 aatcgtttaccaagtaataaagtgataagtagagtatcgtatccacag-gattgtcgtttcttctaaatagctcgtgttacttatttt-aagttgacgat 168288  T
Q  120 ataa--taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||  ||||| |  ||||||||||||| || |||||||||||| |||||    ||||||||||||| ||||||||||||||| | ||||| ||||||||    
T  168287 ataaaataaaagacataagggttagagattt-caatttttatctgtttgc----aacagagcaagtt-acttgtttttggttgtagaaaaggaaacaacg 168194  T
Q  216 gttaagattctttgaat 232  Q
    |||| || |||||||||    
T  168193 gttaggactctttgaat 168177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 36082 - 35857
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||| |||||||||||||||||||||||| |||||||| |||| |||   ||||||||||  ||||||||||||| |||||||||||| |  ||||||||    
T  36082 aatcatttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttattttaagtttgacgat 35983  T
Q  120 ataataaaa---tataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    | |||| ||   |  |||||||||||| ||||||||||||||| |    ||| |||| || ||| |||| || ||||||||||| |||||||| || |||    
T  35982 aaaatataagagttaaagggttagagatttgcaatttttatctat----ttggaacaaagaaag-ttacctgattttggttgcagaaaagtaagcagcgg 35888  T
Q  217 ttaagattctttgaattccctctatttatatt 248  Q
    ||| ||||||| ||| |||| |||||||||||    
T  35887 ttaggattcttagaa-tccccctatttatatt 35857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 17431895 - 17432119
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agtt--ga 115  Q
    |||||||||| |||||||||||||  ||| |||||||| |||| |||  |||||||||||  |||||| || || || ||||||||||||  ||||  |     
T  17431895 aatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttatttttataagttttgg 17431994  T
Q  116 cgatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||||||   ||||||||||||| ||||||| ||||||    ||| || ||||||||||||||||||||||| ||||||||||| |||||||| || ||    
T  17431995 cgatataa---aatataagggttaaagagttgtaatttt----tttctgtttgcaacagagcaagtttacttg-ttttggttgcagaaaagtaagcagcg 17432086  T
Q  216 gttaagattctttgaattccctctatttatatt 248  Q
    |||| ||||||| |||| |||| | ||||||||    
T  17432087 gttaggattcttcgaataccctatgtttatatt 17432119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 165
Target Start/End: Complemental strand, 19004313 - 19004168
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taag-ttgac 116  Q
    |||||||||| ||||||||||||||||||  ||||||| |||| |||  ||||||| ||||||||||| ||||| |||||||||||||  |||| |||||    
T  19004313 aatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttatttttgtaagtttgac 19004214  T
Q  117 gatataataaaatataagggttagagagttgcaatttttatctttttgc 165  Q
    |||   |||||| |||||||||| | ||||||||||||||||| |||||    
T  19004213 gat---ataaaagataagggttaaatagttgcaatttttatctgtttgc 19004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 24245631 - 24245422
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    ||||| |||| | |||||||||||||||| |||||||| |||| |||| ||||||||||| ||||||| || ||||||||||||||||  ||||||||      
T  24245631 aatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttatttttgtaagttgaga 24245532  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    |||||| || ||| |||||||||| | ||| | |||||||    |||| || ||||| ||||||||||| || |||| |||||| |||||||| ||||||    
T  24245531 atataa-aagataaaagggttagaaaggtttcgattttta----tttgtttccaacaaagcaagtttacctg-ttttagttgcagaaaagtaagcaacgg 24245438  T
Q  217 ttaagattctttgaat 232  Q
    ||| ||||||| ||||    
T  24245437 ttaggattcttcgaat 24245422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 25550591 - 25550487
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt-taagttgacga 118  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||  ||||||| ||| ||||||| |||||  |||||||||||| |||||||||||    
T  25550591 aatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaattcttgttacttattttgtaagttgacga 25550492  T
Q  119 tataa 123  Q
    |||||    
T  25550491 tataa 25550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 22755533 - 22755755
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| ||||||| ||| |||||| |||||||| |||| | || |||||||||||  |||||| |||| || ||| ||||||| |  || |||||    
T  22755533 aatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaattggcattatttatttt-agttttacgat 22755631  T
Q  120 ataa--taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacg 215  Q
    ||||  ||||| |  ||||||||||||| || |||||||||||    || ||||||||||||||| ||||| | |||||||| || |||||||| |||||    
T  22755632 ataaaataaaagagttaagggttagagatttacaatttttatc----tgtttgcaacagagcaag-ttactag-ttttggttccaaaaaagtaatcaacg 22755725  T
Q  216 gttaagattctttgaattccctctatttat 245  Q
     ||| ||||||| |||||||| ||||||||    
T  22755726 attatgattcttagaattccccctatttat 22755755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 20315518 - 20315331
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta---agttga 115  Q
    ||||||||||| ||||||||| |||||||| |||||||| |||| |||  |||| || ||| ||||||| ||||||||| |||||||||||   ||||||    
T  20315518 caatcgtttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttatttttattaagttga 20315419  T
Q  116 cgatataataaaatataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    ||||||||   ||| |||||| || |||   ||||||||||||||| |||||    |||| ||||||||||| || ||||||||||| || |||||    
T  20315418 cgatataa---aatttaagggataaagaaacttgcaatttttatctgtttgc----aacaaagcaagtttacatg-ttttggttgcaaaatagtaa 20315331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 39434473 - 39434563
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    ||||||||||| |||||||||| ||||||| |||  ||| |||| |||  ||||||| ||||||||||| |||||||||||||||||||||    
T  39434473 caatcgtttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttattttta 39434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 164
Target Start/End: Complemental strand, 25402405 - 25402278
Alignment:
Q  39 aagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataataaaata--taaggg 136  Q
    |||||||||| |||||||  |||| |||  ||||||||||| |||| ||| |||||||||||||||||| |  ||||| ||| ||||||| |   |||||    
T  25402405 aagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttacttattttaagtttgacaataaaataaaagagtgaaggg 25402306  T
Q  137 ttagagagttgcaatttttatctttttg 164  Q
    ||||||| ||||||||||||||| ||||    
T  25402305 ttagagatttgcaatttttatctgtttg 25402278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 34487654 - 34487791
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 123  Q
    |||||| ||||||||||||| |||| ||| ||||||||| |||  ||||||||||| ||| ||| ||||||||||||||| ||||   ||||||||||||    
T  34487654 gtttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttactta-ttttgttttgacgatataa 34487751  T
Q  124 t-----aaaatataagggttagagagttgcaatttttatct 159  Q
    |     |||| |||||||||||||| |||||||||||||||    
T  34487752 taataaaaaagataagggttagaga-ttgcaatttttatct 34487791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 24267041 - 24266955
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||| |||| || ||||||||||| |||||| ||||||||||||    
T  24267041 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttatttt 24266955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 24343672 - 24343586
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||| |||| || ||||||||||| |||||| ||||||||||||    
T  24343672 aatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttatttt 24343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 15375969 - 15375864
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt--aagttgacg 117  Q
    |||||||||| || ||||||| ||||||| |||||||| |||| |||  ||||||||||| ||||||| |||| || ||||||||||||  |||||||||    
T  15375969 aatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgcattacttatttttgcaagttgacg 15375870  T
Q  118 atataa 123  Q
     |||||    
T  15375869 gtataa 15375864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 24140453 - 24140543
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta 109  Q
    ||||||||||| |||||||||||||||||| |||||||  |||| ||   ||||||| ||| ||||||| |||||||||||| ||||||||    
T  24140453 caatcgtttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattttta 24140543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 20744699 - 20744548
Alignment:
Q  76 gttttgtccaaataattcgcgttacttattttt--aagtt-gacgatataataaaatataagggttagagagttgcaatttttatctttttgcttgcaac 172  Q
    |||| ||||||| | ||| ||||||||||||||  ||||| ||||||||||   ||  ||||||||||||||||||||||||||||    || |||||||    
T  20744699 gtttcgtccaaacatttcacgttacttatttttgtaagtttgacgatataa---aagttaagggttagagagttgcaatttttatc----tgtttgcaac 20744607  T
Q  173 agagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    | ||||||||||| || ||||||||| | |||||||| || |||||| ||||||| ||||    
T  20744606 atagcaagtttacctg-ttttggttgtagaaaagtaagcagcggttaggattcttcgaat 20744548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 157
Target Start/End: Original strand, 15690790 - 15690928
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| || ||||||||||||||| |||||||| |||| || |  |||||||||| ||||||  ||||| |||||||||||||| ||||||| |     
T  15690790 aatcgtttaccaa-taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttacttattttt-agttgacaaa 15690887  T
Q  120 ataataaaa---tataagggttagagagttgcaatttttat 157  Q
      |||||||   |  |||||||||||| |||||||||||||    
T  15690888 taaataaaagagttaaagggttagagatttgcaatttttat 15690928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 20564056 - 20563993
Alignment:
Q  142 gagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaa 209  Q
    |||||||||||||||||| |||||    |||||||||| |||||||||||||||||||| ||||||||    
T  20564056 gagttgcaatttttatctgtttgc----aacagagcaaatttacttgtttttggttgcagaaaagtaa 20563993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 34128647 - 34128856
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgac 116  Q
    |||||||| || |||||||||||||||||| ||| |||| |||| |||   |||||| ||| ||||||| ||||| |||| ||||||||  ||||||||     
T  34128647 caatcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaattctcgtttcttatttttataagttgaa 34128746  T
Q  117 gatataataaaatataagggtt--agagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    | |   ||||||  ||||||||  | ||| ||| |||||| |     ||| |||||| ||||||||||||| || ||||||||||| |||||||| ||||    
T  34128747 ggt---ataaaagttaagggttaaaaagacttgaaattttga----cttgtttgcaatagagcaagtttacctg-ttttggttgcagaaaagtaagcaac 34128838  T
Q  215 ggttaagattctttgaat 232  Q
    ||||| ||||||| ||||    
T  34128839 ggttaggattcttcgaat 34128856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 18208335 - 18208249
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||||||| |||| |||||||| |||| |||  ||||||| ||| ||||||| |||||  ||||||||||||    
T  18208335 aatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaattcatgttacttatttt 18208249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 19283942 - 19283840
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||| || ||||||||||||||| |||||||  |||| ||||  |||  ||||| ||||||| |||| || | ||||| |||||||||||||||    
T  19283942 aatcgtttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaatttgcttaactta-ttttaagttgacgat 19283844  T
Q  120 ataa 123  Q
    ||||    
T  19283843 ataa 19283840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 15375839 - 15375773
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||||||||||||||||  | | |||||||||||||||||||||  |||||||| ||||||| ||||    
T  15375839 ttgcaacagagcaagttcgcctatttttggttgcataaaagtaagtaacggttaggattcttcgaat 15375773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 17185475 - 17185561
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||| ||||| || ||||||||||||||| |||||||| ||||||||  |||||||||||   ||||| ||||| |||||| |||||    
T  17185475 aatcatttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgttacgtattt 17185561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 241
Target Start/End: Complemental strand, 16523766 - 16523672
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctat 241  Q
    ||||||||||||||||| |||||    |||||||| | ||||| ||||||| |||  | |||||||| || |||||| |||||||||||| ||||||||    
T  16523766 agttgcaatttttatctgtttgc----aacagagcgaatttacctgttttttgttatagaaaagtaagcagcggttaggattctttgaatcccctctat 16523672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 17315033 - 17314984
Alignment:
Q  190 ttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||| |||||||| || ||||||||||||||||||| ||||||    
T  17315033 ttttggttgcaaaaaagtaagcagcggttaagattctttgaatcccctct 17314984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 19086266 - 19086181
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatt 105  Q
    |||||||||| |||||||||||||||||| ||||||| ||||| |||   ||||| |||||||| ||  |||||  ||||||||||    
T  19086266 aatcgtttaccaagtaataaagtgataagtagagtattatatccacatgaattgttgttttgtcaaatcaattcatgttacttatt 19086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 23388914 - 23388837
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| |||| || |||||  |||||||||||||    
T  23388914 aagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattttt 23388837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 28664917 - 28664989
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    |||||||||||| | ||||| |||||| ||||||| |||| ||| ||||||||||||||||| |||| ||||||    
T  28664917 ttgcaacagagcgaatttacctgtttt-ggttgcagaaaaataagcaacggttaagattcttcgaatcccctct 28664989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 17171629 - 17171553
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||||||||||| |||| ||| |||| |||  ||||||||||| ||| ||  ||||||||||| |||||||    
T  17171629 aagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgttaattatttt 17171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 24167671 - 24167612
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttt 79  Q
    |||||||||| ||||||||||||  |||| |||||||||||| ||||  |||||||||||    
T  24167671 aatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgttt 24167612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 24852259 - 24852173
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||| |||| |||||||||| ||||||| | |||||| |||| |||  |||||| |||| ||| ||| ||||| ||||||||||||    
T  24852259 aatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaattcacgttacttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 20858708 - 20858785
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| ||||||| |||||||| |||| ||   ||||||| |||||||| || |||||  |||||||||||||    
T  20858708 aagtaataaaatgataagtagagtatcgtatccacggagattgtccttttgtccgaacaattcttgttacttattttt 20858785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 24140596 - 24140651
Alignment:
Q  171 acagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctt 227  Q
    ||||||||||||||| | |||| ||||||| |||||||| ||||||||| |||||||    
T  24140596 acagagcaagtttacctatttt-ggttgcagaaaagtaagcaacggttaggattctt 24140651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 24260560 - 24260616
Alignment:
Q  52 agtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||| |||| |||| ||||||| ||| ||||||| ||| ||||||||||||||||    
T  24260560 agtatcgtatccacaaggattgtcatttcgtccaaaaaatccgcgttacttattttt 24260616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 26120881 - 26120964
Alignment:
Q  24 gtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||| | ||||||||||  |||| ||||||||||||  | || ||||||||||| ||||||| |||| || ||||||||||||    
T  26120881 gtttaccatgtaataaagtt-taagtagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattacttattttt 26120964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 36175146 - 36175233
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||| ||||||||||||| |  | |||||||| |||| | || ||||||||||| ||||||| ||   |||||||||||||||    
T  36175146 aatcgtttaccaagtaataaagtgttt-gtagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttacttattttt 36175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 248
Target Start/End: Complemental strand, 904 - 684
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttta--agtt-gacgatata 122  Q
    |||| |||||||||||||||||| |||||||| |||| |    ||||||||||| ||||||| ||| | |||||||||||||||  |||| |||||||||    
T  904 ttaccaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttatttttataagtttgacgatata 805  T
Q  123 ataaaatataagggtt-agagag-ttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaa 220  Q
    |   || ||||||||| ||| || ||||||||||||||| |||||    ||||||| |||||||| |||||||||||||| ||||||||  | |||||||    
T  804 a---aagataagggtttagaaagattgcaatttttatctgtttgc----aacagagaaagtttacctgtttttggttgcagaaaagtaagaagcggttaa 712  T
Q  221 gattctttgaattccctctatttatatt 248  Q
    ||||||| |||  |||||| ||||||||    
T  711 gattcttcgaaccccctctgtttatatt 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 69925 - 70128
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt--taagttgacg 117  Q
    |||| ||||| |||||||||||||| ||| | |||||| |||  |||| ||||||||||| ||||||| ||||| |||||||||||||  || ||||| |    
T  69925 aatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatttttgtatgttgatg 70024  T
Q  118 atataataaaatataagggttagaga-gttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    ||   |||||| |||| ||||||| | |||||||||||||    |||| |||||| ||||||||||||| |||||||||||| | |||||||| || | |    
T  70025 at---ataaaagataaaggttagaaaggttgcaattttta----tttgtttgcaatagagcaagtttacctgtttttggttgtagaaaagtaagcagcag 70117  T
Q  217 ttaagattctt 227  Q
    ||| |||||||    
T  70118 ttaggattctt 70128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 69099 - 69323
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataata 125  Q
    |||| ||||||||||||||||||  ||| ||| |||| |||| |||||||  ||| |||||| |||| || || |||||||||| |||||| ||||||||    
T  69099 ttaccaagtaataaagtgataagttgagaatcgtatccacaaggattgtcactttctccaaacaatttgcattgcttattttta-gttgacaatataata 69197  T
Q  126 aaata-taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagatt 224  Q
    ||  | ||||||||| ||| ||||||||||||||| |||||    ||||||| |||||||| |||| ||   |||| |||| ||| || |||||| ||||    
T  69198 aacgagtaagggttatagaattgcaatttttatctgtttgc----aacagagaaagtttacctgttcttacatgcagaaaaataagcagcggttaggatt 69293  T
Q  225 ctttgaattccctctatttatattcttcga 254  Q
    ||| |||||| | ||||||||||| |||||    
T  69294 cttagaattcacactatttatattattcga 69323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 54872 - 55097
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgtttt-gtccaaataattcgcgttacttatttttaagttgacga 118  Q
    |||||||||| |||||||||||||||||| |||||||  |||| |||  |||||||||||| ||| |||||  | |||||||||| ||||||||| ||||    
T  54872 aatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagcttgcgttactta-ttttaagttaacga 54970  T
Q  119 tata----ataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaac 214  Q
    ||||    | |||| |||||||||||||| || |||||||||    |||| |||| ||| |||||| |||| |||||||||||||| ||||| |||||      
T  54971 tataaaataaaaaagataagggttagaga-ttccaattttta----tttgtttgcgacatagcaag-ttacctgtttttggttgcacaaaagaaaacact 55064  T
Q  215 ggttaagattctttgaattccctctatttatatt 248  Q
    ||||| || |||||||| |||| |||||||||||    
T  55065 ggttaggactctttgaa-tccccctatttatatt 55097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 48277 - 48233
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatcta 64  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||    
T  48277 aatcgtttaccaagtaataaagtgataagtagagtatcgtatcta 48233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 39601 - 39818
Alignment:
Q  25 tttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataat-tcgcgttacttatttttaagttgacgatataa 123  Q
    ||||| |||||||||||||||||| |||| ||| |||| ||| ||||||| |||||||||||| ||  || | ||||||||||| |||||||||||||||    
T  39601 tttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaaactcactttacttatttt-aagttgacgatataa 39699  T
Q  124 --taaaata--taagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggtta 219  Q
      ||||| |  ||||  ||||||| ||||||||||||||| |||||    ||||||||||||| || |||||| ||||||| |||||||| || ||||||    
T  39700 aataaaagagataagaattagaga-ttgcaatttttatctgtttgc----aacagagcaagtt-acctgtttt-ggttgcagaaaagtaagcagcggtta 39792  T
Q  220 agattctttgaattccctctatttat 245  Q
     || ||||||||| ||| ||||||||    
T  39793 tgactctttgaatcccccctatttat 39818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 232
Target Start/End: Complemental strand, 43303 - 43105
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatat--aataaa- 127  Q
    |||||||||||||||||| | |||| | |||| |||| ||||||||||| ||| ||| |  ||| |||||||| |||||| ||||||||||  ||||||     
T  43303 aagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttactta-ttttaaattgacgatataaaataaaa 43205  T
Q  128 -atataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattct 226  Q
     | |||||||||||||| ||||||||||||||    || ||||||||||||||| |||| ||||||||||| || ||||  ||| | ||||||||| |||    
T  43204 gagataagggttagaga-ttgcaatttttatc----tgtttgcaacagagcaag-ttacctgtttttggttacagaaaacaaaatagcggttaagactct 43111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 35549 - 35771
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgat 119  Q
    |||||||||  |||||||||||||||||  |||||||  |||| |||  |||| |||||| ||||||| ||||||| ||||||||||| |  |||| |||    
T  35549 aatcgtttatcaagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttattttaagtttgatgat 35648  T
Q  120 ataataaaa---tataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacgg 216  Q
    | |||||||   |  |||||||||||| ||||||||||||    ||||  ||||||| |||||| |||| || ||||||||||| ||| |||| || |||    
T  35649 aaaataaaagagttaaagggttagagatttgcaattttta----tttgtctgcaacaaagcaag-ttacctg-ttttggttgcagaaaggtaagcagcgg 35742  T
Q  217 ttaagattctttgaattccctctatttat 245  Q
    |||||||||||  ||| |||| |||||||    
T  35743 ttaagattcttcaaatcccctatatttat 35771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 740 - 843
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcg-cgttacttatttttaagttgacga 118  Q
    |||||||||| |||||||||||||||||| |||||||  |||| |||| ||||||||||| ||||||| ||| || ||||||||| ||||||||||| ||    
T  740 aatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttactta-ttttaagttgaaga 838  T
Q  119 tataa 123  Q
    |||||    
T  839 tataa 843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 89940 - 89854
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||  |||||||||| ||| ||| || ||||||||||||||||    
T  89940 aatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttcgtctaaacaactcgcgttacttatttt 89854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 3749 - 3850
Alignment:
Q  122 aataaaatataagggttagagagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaag 221  Q
    |||||||||||||||||||||||||||||||||||||    |||| |||||| || |||||||| | |||||| ||||| |||||||| |  |||||| |    
T  3749 aataaaatataagggttagagagttgcaatttttatc----tgctcgcaacatagaaagtttacctatttttgtttgcagaaaagtaagctgcggttagg 3844  T
Q  222 attctt 227  Q
    ||||||    
T  3845 attctt 3850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 475 - 317
Alignment:
Q  21 atcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatt--tttaagttgacga 118  Q
    ||||||||| |||||||||||||||| | |||||||| |||| |||  ||||||| ||| ||||||| ||||| |||||  ||||  | |||||||||||    
T  475 atcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaattctcgttagatatttatataagttgacga 376  T
Q  119 tataataaaatataagggttagagag--ttgcaatttttatctttttgcttgcaacagagcaagt 181  Q
    ||||| || ||| |||||||||| ||  ||||||||||||||    ||||||||| |||||||||    
T  375 tataa-aagata-aagggttagaaagtcttgcaatttttatc----tgcttgcaatagagcaagt 317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 6299 - 6385
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||||||||| ||||| | |||||| |||| |||  |||||| |||| ||||||| ||||||| ||||||||||    
T  6299 aatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattacttattt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 21287 - 21376
Alignment:
Q  19 caatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||| || |||||||||||||||||| ||||||||||||| |||  ||||||| ||| |||| || |||||  ||||| |||||||    
T  21287 caatcgttaacaaagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaattcttgttacatattttt 21376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 25130 - 25190
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctt 227  Q
    |||||||||||||||||||| |||||| ||||||| |||||||| ||||||||| |||||||    
T  25130 ttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagcaacggttaggattctt 25190  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 181786 - 181706
Alignment:
Q  26 ttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttatttt 107  Q
    |||| |||||||||||||||||   ||||||| |||| |||  |||||||||||||||||||||| ||| ||||||||||||    
T  181786 ttaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttttgtccaaataagtcgtgttacttatttt 181706  T

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Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 11266 - 11338
Alignment:
Q  34 taataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||||||||| |||||||||||||||||  |||||| ||||   ||||| |||| || ||||||||||    
T  11266 taataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcattacttattt 11338  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 3554 - 3631
Alignment:
Q  31 aagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattttt 108  Q
    |||||||||||||||||| |||||||| |||| |||  ||||||| ||| |||| || |||||  |||||||||||||    
T  3554 aagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattttt 3631  T

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Target: scaffold0671 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 567 - 658
Alignment:
Q  143 agttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctct 239  Q
    ||||||||||||||||| |||||    |||||||| | ||||| |||||| ||||||| |||||||| || |||||| ||||||| |||| ||||||    
T  567 agttgcaatttttatctgtttgc----aacagagcgaatttacctgtttt-ggttgcagaaaagtaagcagcggttaggattcttcgaatcccctct 658  T

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Target: scaffold0653 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 4570 - 4484
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    |||||||||| |||||| ||| || ||||||||||||| |||| |||  ||||||| ||| ||  ||| |||||| |||||||||||    
T  4570 aatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttacttattt 4484  T

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Target: scaffold0386 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 6069 - 5978
Alignment:
Q  142 gagttgcaatttttatctttttgcttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccct 237  Q
    |||||||||||||||||| |||||    || ||||| | |||||||||||||||||| | ||||||||  |||||| | ||||||| |||| ||||    
T  6069 gagttgcaatttttatctgtttgc----aatagagcgaatttacttgtttttggttgtagaaaagtaagtaacggtcaggattcttcgaatcccct 5978  T

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Target: scaffold0351 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 5692 - 5642
Alignment:
Q  182 ttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||| |||||||||||| | ||||| |||||||||||| ||||||||||||    
T  5692 ttacctgtttttggttgtagaaaaggaaacaacggttaggattctttgaat 5642  T

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Target: scaffold0351; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 196 - 152
Alignment:
Q  188 gtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    ||||||||||||| ||||| |||||||||||| || |||||||||    
T  196 gtttttggttgcagaaaaggaaacaacggttaggactctttgaat 152  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 662 - 592
Alignment:
Q  36 ataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcgcgttacttattt 106  Q
    ||||||||| ||| |||||||  |||| ||| ||||| | |||||||| ||||||||| ||||||||||||    
T  662 ataaagtgaaaagtagagtattgtatccacattgattctagttttgtctaaataattcacgttacttattt 592  T

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Target: scaffold0090 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 7499 - 7425
Alignment:
Q  20 aatcgtttactaagtaataaagtgataagcagagtatcatatctacaatgattgtcgttttgtccaaataattcg 94  Q
    |||||||||  |||||||||||||||||| |||||||  ||| |||||  |||||||||| ||| ||| ||||||    
T  7499 aatcgtttatcaagtaataaagtgataagtagagtattgtatttacaagaattgtcgtttggtctaaacaattcg 7425  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 72165 - 72247
Alignment:
Q  166 ttgcaacagagcaagtttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaattccctctatttatatt 248  Q
    |||||||||||||||||||| | ||||| |||||| |||||||| ||   || | ||||||| |||| |||||| ||||||||    
T  72165 ttgcaacagagcaagtttacgtatttttagttgcagaaaagtaagcagtagtaaggattcttcgaatcccctctgtttatatt 72247  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 114659 - 114709
Alignment:
Q  182 ttacttgtttttggttgcataaaagtaaacaacggttaagattctttgaat 232  Q
    |||| |||||||||||||| ||||| |||||||||||| || |||||||||    
T  114659 ttacctgtttttggttgcagaaaaggaaacaacggttaggactctttgaat 114709  T

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