View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16697_low_45 (Length: 217)
Name: NF16697_low_45
Description: NF16697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16697_low_45 |
 | |
|
| [»] scaffold0118 (1 HSPs) |
| | |
|
| [»] scaffold0122 (2 HSPs) |
| | |
|
| [»] scaffold0069 (1 HSPs) |
| | |
|
| [»] scaffold0163 (1 HSPs) |
| | |
|
| [»] scaffold0107 (2 HSPs) |
| | |
|
| [»] scaffold0595 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 17)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 33100690 - 33100644
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33100690 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctcca |
33100644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 24211404 - 24211455
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctccagaaaa |
61 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
24211404 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctccaaaaaa |
24211455 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 8210368 - 8210323
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8210368 |
agaatcatacgaaaagcacctaaggaattgtacctaagttttctcc |
8210323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 15882327 - 15882372
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15882327 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
15882372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 17426756 - 17426801
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
17426756 |
agaaccatacgaaaagcacctaaaaaattgtacctaagttttctcc |
17426801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 12234598 - 12234638
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12234598 |
catacgaaaagcatctaagaaattgtacctaagttttctcc |
12234638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 37114283 - 37114239
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
37114283 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctc |
37114239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 40891139 - 40891182
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttct |
53 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
40891139 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttct |
40891182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 15882234 - 15882200
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15882234 |
aaaagcacctaaggaattgtacctaagttttctcc |
15882200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 33100781 - 33100815
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
33100781 |
gaaaagcacataagaaattgtacctaagttttctc |
33100815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 17426673 - 17426628
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17426673 |
agaaccatacgaaaagcacctaatgaattgtacctaagttttctcc |
17426628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 23940849 - 23940804
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
23940849 |
agaatcatacgaaaagcacttaagaaattgtaccgaagttttctcc |
23940804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 24211323 - 24211278
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24211323 |
agaaccatacgaaaagcacctaaagaattgtacctaagttttctcc |
24211278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 24741868 - 24741827
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagtttt |
51 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
24741868 |
agaaccatacgaaaagcacctaaggaattgtacctaagtttt |
24741827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 38629600 - 38629645
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
38629600 |
agaaccatacgaaaaacacctaaggaattgtacctaagttttctcc |
38629645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 23940936 - 23940976
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
23940936 |
catacgaaaagcacctaaggaattgtaactaagttttctcc |
23940976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 38520149 - 38520189
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| ||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
38520149 |
catacgaaaagcacttaaggaattgtacctaagttttctcc |
38520189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 17101700 - 17101746
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17101700 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctcca |
17101746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 17101699 - 17101654
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17101699 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc |
17101654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 20184283 - 20184237
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20184283 |
agaatcatacgaaaagcacctaaggaattgtacctaagttttctcca |
20184237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 24836146 - 24836192
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24836146 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcca |
24836192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 10936596 - 10936641
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10936596 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
10936641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 24836065 - 24836020
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24836065 |
agaaccatacgaaaagcacctaagcaattgtacctaagttttctcc |
24836020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 25742480 - 25742435
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
25742480 |
agaaccataggaaaaacacctaagaaattgtacataagttttctcc |
25742435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 30259111 - 30259070
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagtttt |
51 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30259111 |
agaaccataggaaaagcacctaaggaattgtacctaagtttt |
30259070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 31231742 - 31231787
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31231742 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
31231787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 33721872 - 33721827
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
33721872 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
33721827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 34052405 - 34052450
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34052405 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
34052450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 35339323 - 35339278
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35339323 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
35339278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 35665678 - 35665633
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35665678 |
agaaccatacgaaaagcacctaagcaattgtacctaagttttctcc |
35665633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 38528538 - 38528583
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
38528538 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
38528583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 47237554 - 47237599
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
47237554 |
agaaccatacgaaaagcaccttagaaattgtacctaagttttctcc |
47237599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 48103413 - 48103368
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
48103413 |
agaatcatacgaaaaacacctaagaaattgtacctaagttttctcc |
48103368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 34052324 - 34052272
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctccagaaaat |
62 |
Q |
| |
|
|||| |||| |||||||||||||| || ||||||||||||||||||| ||||| |
|
|
| T |
34052324 |
agaaccatacgaaaagcacctaaggaaatgtacctaagttttctccaaaaaat |
34052272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 30594728 - 30594693
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30594728 |
gaaaagcacctaaggaattgtacctaagttttctcc |
30594693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 31231648 - 31231613
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31231648 |
aaaagcacctaaggaattgtacctaagttttctcca |
31231613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 35665747 - 35665786
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
35665747 |
catacgaaaagcacctaaggaattgtacctaagttttctc |
35665786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 38883347 - 38883393
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
38883347 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcca |
38883393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 20184365 - 20184410
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
20184365 |
agaatcatacgaaaagcagctaaggaattgtacctaagttttctcc |
20184410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 38883266 - 38883221
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
38883266 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
38883221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 10936505 - 10936469
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
10936505 |
gaaaagcacctaaggaattgtacataagttttctcca |
10936469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 11486909 - 11486865
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||| ||||||||||||||||||| |||||| |
|
|
| T |
11486909 |
agaaccatacgaaaagcatctaagaaattgtacctaagctttctc |
11486865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 885511 - 885556
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
885511 |
agaatcataggaaaagcacctaaggaattgtacctaagttttctcc |
885556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 4890525 - 4890480
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4890525 |
agaaccatacgaaaaacacctaagaaattgtacctaagttttctcc |
4890480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 6433735 - 6433690
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
6433735 |
agaaccatacgaaaagcacctaagaaattatacctaagttttctcc |
6433690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 8091188 - 8091233
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8091188 |
agaaccatacgaaaagcacctaagcaattgtacctaagttttctcc |
8091233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 15546758 - 15546803
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15546758 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
15546803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 21379986 - 21379941
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21379986 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
21379941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 21380067 - 21380112
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21380067 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
21380112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 7808735 - 7808779
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
7808735 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctc |
7808779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 11687269 - 11687320
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctccagaaaa |
61 |
Q |
| |
|
|||| |||| |||||||| ||||| |||||||||||||||||||||| |||| |
|
|
| T |
11687269 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctccaaaaaa |
11687320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 885419 - 885385
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
885419 |
aaaagcacctaaggaattgtacctaagttttctcc |
885385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 4890607 - 4890652
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||| |||||||| |
|
|
| T |
4890607 |
agaaccatacgaaaagcacctaaggaattgtacctaaattttctcc |
4890652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 11687188 - 11687143
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
11687188 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
11687143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 55
Target Start/End: Original strand, 17279666 - 17279695
Alignment:
| Q |
26 |
cacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
17279666 |
cacctaagaaattgtacctaagttttctcc |
17279695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 18998152 - 18998116
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
18998152 |
gaaaaacacctaaggaattgtacctaagttttctcca |
18998116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 44)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 4072318 - 4072273
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4072318 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc |
4072273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 5529936 - 5529892
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5529936 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctc |
5529892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 26976877 - 26976842
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976877 |
gaaaagcacctaagaaattgtacctaagttttctcc |
26976842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 13078289 - 13078335
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13078289 |
agaatcatacgaaaagtacctaagaaattgtacctaagttttctcca |
13078335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 3970617 - 3970662
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3970617 |
agaaccatacgaaaagtacctaagaaattgtacctaagttttctcc |
3970662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 13724022 - 13723989
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
13724022 |
aaaagcacctaagaaattgtacctaagttttctc |
13723989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 21969202 - 21969157
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21969202 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
21969157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 21969283 - 21969328
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21969283 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
21969328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 21991638 - 21991593
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21991638 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
21991593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 21991719 - 21991764
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21991719 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
21991764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 32237520 - 32237565
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
32237520 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
32237565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 36822886 - 36822931
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
36822886 |
agaaccatacgaaaagcacctaaaaaattgtacctaagttttctcc |
36822931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 39850471 - 39850516
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
39850471 |
agaatcatacgaaaagcacctaaggaattgtacctaagttttctcc |
39850516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 45487844 - 45487799
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
45487844 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
45487799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 45487925 - 45487970
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
45487925 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
45487970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 50099560 - 50099605
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
50099560 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
50099605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 404084 - 404044
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
404084 |
catacgaaaagcacctaagaaattgtacgtaagttttctcc |
404044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 8831867 - 8831911
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8831867 |
agaaccatacgaaaagcacctaaaaaattgtacctaagttttctc |
8831911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 10017159 - 10017115
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
10017159 |
agaaccatatgaaaagcacctaaggaattgtacctaagttttctc |
10017115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 10254613 - 10254569
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
10254613 |
agaaccatatgaaaagcacctaaggaattgtacctaagttttctc |
10254569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 43639208 - 43639251
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttct |
53 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
43639208 |
agaatcatacgaaaagcacctaaggaattgtacctaagttttct |
43639251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 45712937 - 45712902
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |
|
|
| T |
45712937 |
aaaagcacctaaggaattgtacctaagttttctcca |
45712902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 10441395 - 10441429
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10441395 |
aaaagcacctaaggaattgtacctaagttttctcc |
10441429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 13078208 - 13078162
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
13078208 |
agaaccatacgaaaagcacctaaggaattgcacctaagttttctcca |
13078162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 25488478 - 25488512
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25488478 |
aaaagcacctaaggaattgtacctaagttttctcc |
25488512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 25561045 - 25561011
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25561045 |
aaaagcacctaaggaattgtacctaagttttctcc |
25561011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 45713029 - 45713071
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttc |
52 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
45713029 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttc |
45713071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 1476677 - 1476718
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagtttt |
51 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
1476677 |
agaaccatatgaaaagcacctaaggaattgtacctaagtttt |
1476718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 3970536 - 3970491
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
3970536 |
agaaccatacgaaaagcacctaaggaattgcacctaagttttctcc |
3970491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 4072400 - 4072445
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
4072400 |
agaaccatacgaaaaacacctaaggaattgtacctaagttttctcc |
4072445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 8831785 - 8831744
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagtttt |
51 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
8831785 |
agaaccatacgaaaagcacctaaggaattgtacctaagtttt |
8831744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 10117637 - 10117682
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||| |||||||| |
|
|
| T |
10117637 |
agaaccatacgaaaagcacctaaggaattgtacctaaattttctcc |
10117682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 12789651 - 12789606
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
12789651 |
agaaccatacgaaaaacacctaaggaattgtacctaagttttctcc |
12789606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 26906499 - 26906454
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
26906499 |
agaaccatacgaaaaggacctaaggaattgtacctaagttttctcc |
26906454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 26977816 - 26977861
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| | ||||||||||||||||||||||||||| |
|
|
| T |
26977816 |
agaaccatatgaaaagtatctaagaaattgtacctaagttttctcc |
26977861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 35368594 - 35368549
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
35368594 |
agaaccatacgaaaagcacataaggaattgtacctaagttttctcc |
35368549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 36278882 - 36278927
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
36278882 |
agaaccatacgaaaaggacctaaggaattgtacctaagttttctcc |
36278927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 36657478 - 36657433
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
36657478 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
36657433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 36657559 - 36657604
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
36657559 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
36657604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 36822805 - 36822760
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
36822805 |
agaaccatacgaaaagcagctaaggaattgtacctaagttttctcc |
36822760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 10017235 - 10017279
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
10017235 |
agaaccatacgaaaagcacctaaggaattgtacctaaattttctc |
10017279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 10117560 - 10117516
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| || ||||||||||||||||| |
|
|
| T |
10117560 |
agaaccatatgaaaagcacctaaggaactgtacctaagttttctc |
10117516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 10254695 - 10254739
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
10254695 |
agaaccatacgaaaagcacctaaggaattgtacctaaattttctc |
10254739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 35368864 - 35368904
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| ||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
35368864 |
catacgaaaaacacataagaaattgtacctaagttttctcc |
35368904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 1924025 - 1923980
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
1924025 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc |
1923980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 20892929 - 20892884
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20892929 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc |
20892884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 34455930 - 34455884
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
34455930 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcca |
34455884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 45408751 - 45408797
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
45408751 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcca |
45408797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 7737098 - 7737065
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
7737098 |
aaaagcacctaagaaattgtacctaagttttctc |
7737065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 7737191 - 7737236
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7737191 |
agaatcatacgaaaagcacctaaggaattgtacctaagttttctcc |
7737236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 9933695 - 9933740
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
9933695 |
agaaccatacgaaaagcacctaagaaattgtacctaaattttctcc |
9933740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 16705778 - 16705733
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16705778 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
16705733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 24101877 - 24101832
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24101877 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
24101832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 34490582 - 34490627
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
34490582 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
34490627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 42713914 - 42713949
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
42713914 |
gaaaagcacttaagaaattgtacctaagttttctcc |
42713949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 24101958 - 24102004
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
24101958 |
agaaccatacgaaaagcacctaaggaattgtacttaagttttctcca |
24102004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 1924107 - 1924152
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
1924107 |
agaaccatacgaaaaacacctaaggaattgtacctaagttttctcc |
1924152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 9281473 - 9281518
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
9281473 |
agaaccatacgaaaaggacctaaggaattgtacctaagttttctcc |
9281518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 16705864 - 16705905
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
16705864 |
catacgaaaagcacctaaggaattgtacctaaattttctcca |
16705905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 22269762 - 22269721
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| ||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
22269762 |
catacgaaaaacacctaaggaattgtacctaagttttctcca |
22269721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 23835921 - 23835876
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||| |||||||||||| |
|
|
| T |
23835921 |
agaaccatacgaaaagcacctaaggaattgtacataagttttctcc |
23835876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 27920698 - 27920743
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| |||| |||||||||||||||||||||| |
|
|
| T |
27920698 |
agaaccatacgaaaagcagctaaaaaattgtacctaagttttctcc |
27920743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 2818711 - 2818671
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttt |
50 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||| |
|
|
| T |
2818711 |
agaatcatacgaaaagcacctaaggaattgtacctaagttt |
2818671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 10553007 - 10553051
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
10553007 |
agaatcatacgaaaaacacctaaggaattgtacctaagttttctc |
10553051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 27920612 - 27920573
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27920612 |
catacgaaaagcacctaagaaattgta-ctaagttttctcc |
27920573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 27)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 3607855 - 3607900
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3607855 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc |
3607900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 15324671 - 15324626
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
15324671 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc |
15324626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 47940615 - 47940570
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
47940615 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctcc |
47940570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 51276821 - 51276865
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
51276821 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctc |
51276865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 19797021 - 19796982
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
19797021 |
catacgaaaagcacctaagaaattgtacctaagttttctc |
19796982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 5189514 - 5189460
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctccagaaaattt |
64 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
5189514 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctccttaaaattt |
5189460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 19797107 - 19797152
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19797107 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
19797152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 27240969 - 27240924
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27240969 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
27240924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 49285101 - 49285146
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
49285101 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
49285146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 9978178 - 9978222
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
9978178 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctc |
9978222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 40647249 - 40647289
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40647249 |
catacgaaaagcacctaaggaattgtacctaagttttctcc |
40647289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 2125206 - 2125241
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |
|
|
| T |
2125206 |
gaaaagcacctaagaaattgtacctaaattttctcc |
2125241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 23698628 - 23698674
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
23698628 |
agaaccatacgaaaaggacctaaggaattgtacctaagttttctcca |
23698674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 25297973 - 25298019
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| ||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
25297973 |
agaaccatacgaaaaacacctaaggaattgtacctaagttttctcca |
25298019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 27926378 - 27926424
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
27926378 |
agaaccatacgaaaagcacctaaggaattgtacataagttttctcca |
27926424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 42561432 - 42561466
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
42561432 |
aaaagcacctaaggaattgtacctaagttttctcc |
42561466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 2854658 - 2854703
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
2854658 |
agaaccatacgaaaaggacctaaggaattgtacctaagttttctcc |
2854703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 4299521 - 4299566
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
4299521 |
agaaccatacgaaaaacacctaaggaattgtacctaagttttctcc |
4299566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 36880637 - 36880682
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
36880637 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
36880682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 47940697 - 47940742
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
47940697 |
agaaccatacgaaaaacacctaaggaattgtacctaagttttctcc |
47940742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 48954259 - 48954214
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
48954259 |
agaaccatatgaaaagtacctaaggaattgtacctaagttttctcc |
48954214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 48954340 - 48954385
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
48954340 |
agaaccatacgaaaaggacctaaggaattgtacctaagttttctcc |
48954385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 50627176 - 50627131
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
50627176 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
50627131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 1387904 - 1387948
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
1387904 |
agaaccatacgaaaagcacctaaggaattgtacctaaattttctc |
1387948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 14387141 - 14387185
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
14387141 |
agaaccatacgaaaaacacctaaggaattgtacctaagttttctc |
14387185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 50162676 - 50162708
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttct |
53 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |
|
|
| T |
50162676 |
aaaagcacctaaggaattgtacctaagttttct |
50162708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 51789637 - 51789597
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
51789637 |
catacgaaaatcacctaaggaattgtacctaagttttctcc |
51789597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0118 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0118
Description:
Target: scaffold0118; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 14482 - 14442
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
14482 |
cataggaaaaacacctaagaaattgtacctaagttttctcc |
14442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 17583370 - 17583410
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17583370 |
catacgaaaagcacctaagaaattgtacctaagttttctcc |
17583410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 780918 - 780959
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagtttt |
51 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
780918 |
agaaccatacgaaaagcacctaagaaattgtacctaagtttt |
780959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 4266027 - 4265982
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4266027 |
agaaccatacgaaaaacacctaagaaattgtacctaagttttctcc |
4265982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 18236511 - 18236470
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagtttt |
51 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
18236511 |
agaatcataggaaaagcagctaagaaattgtacctaagtttt |
18236470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 20476557 - 20476602
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20476557 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
20476602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 15855969 - 15856020
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctccagaaaa |
61 |
Q |
| |
|
|||| |||| |||||||| ||||| |||||||||||||||||||||| |||| |
|
|
| T |
15855969 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctccaaaaaa |
15856020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 24397372 - 24397415
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttct |
53 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
24397372 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttct |
24397415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 16473081 - 16473127
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
16473081 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcca |
16473127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 15855888 - 15855843
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
15855888 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
15855843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 21591253 - 21591212
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| ||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
21591253 |
catacgaaaagcacttaaggaattgtacctaagttttctcca |
21591212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 21595370 - 21595329
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| ||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
21595370 |
catacgaaaagcacttaaggaattgtacctaagttttctcca |
21595329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 35420657 - 35420612
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
35420657 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
35420612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 35420738 - 35420783
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
35420738 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
35420783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 25751587 - 25751619
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttc |
52 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |
|
|
| T |
25751587 |
gaaaagcacctaaaaaattgtacctaagttttc |
25751619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 26)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 4688292 - 4688248
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4688292 |
agaaccatacgaaaagcacctaagaaattgtacctaagttttctc |
4688248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 3422464 - 3422429
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
3422464 |
gaaaagcacctaagaaattgtacctaagttttctcc |
3422429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 530795 - 530841
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
530795 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcca |
530841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 28809880 - 28809846
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
28809880 |
aaaagcacctaagaaattgtacctaagttttctcc |
28809846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 1299038 - 1299083
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1299038 |
agaaccataagaaaagcacctaaggaattgtacctaagttttctcc |
1299083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 24915839 - 24915794
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
24915839 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
24915794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 43486245 - 43486200
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| ||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
43486245 |
agaaccataggaaaagtacctaaggaattgtacctaagttttctcc |
43486200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 52824284 - 52824239
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
52824284 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctcc |
52824239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 18417702 - 18417658
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
18417702 |
agaaccatacgaaaagcacctaaggaattgtacctaagttttctc |
18417658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 24969680 - 24969716
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24969680 |
gaaaagcacctaaggaattgtacctaagttttctcca |
24969716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 28573982 - 28573946
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |
|
|
| T |
28573982 |
gaaaagcacctaagtaattgtacctaagttttctcca |
28573946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 55107569 - 55107518
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctccagaaaa |
61 |
Q |
| |
|
|||| |||| ||||||||| |||| |||||||||||||||||||||| |||| |
|
|
| T |
55107569 |
agaaccatatgaaaagcacataaggaattgtacctaagttttctccataaaa |
55107518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 530703 - 530669
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
530703 |
aaaagcacctaaggaattgtacctaagttttctcc |
530669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 1298946 - 1298912
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1298946 |
aaaagcacctaaggaattgtacctaagttttctcc |
1298912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 18417794 - 18417828
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
18417794 |
aaaagcacctaaggaattgtacctaagttttctcc |
18417828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 27434644 - 27434610
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |
|
|
| T |
27434644 |
aaaagcacataagaaattgtacctaagttttctcc |
27434610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 27434736 - 27434782
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
27434736 |
agaaccatacgaaaagcacctaaggaattgtacttaagttttctcca |
27434782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 28809984 - 28810018
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |
|
|
| T |
28809984 |
aaaagcagctaagaaattgtacctaagttttctcc |
28810018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 55107661 - 55107695
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
55107661 |
aaaagcacctaaggaattgtacctaagttttctcc |
55107695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 11330151 - 11330106
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
11330151 |
agaatcatatgaaaagcatctaagaaattgtatctaagttttctcc |
11330106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 20435266 - 20435311
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20435266 |
agaaccatacgaaaagcacctaaagaattgtacctaagttttctcc |
20435311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 42274537 - 42274492
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
42274537 |
agaaccatacgaaaagcatctaaggaattgtacctaagttttctcc |
42274492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 4552825 - 4552785
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| ||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
4552825 |
catatgaaaagcacttaaggaattgtacctaagttttctcc |
4552785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 32318765 - 32318721
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| ||||||||| |||| |||||||||||||||||||| |
|
|
| T |
32318765 |
agaaccatacgaaaagcacataaggaattgtacctaagttttctc |
32318721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 42274619 - 42274663
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctc |
54 |
Q |
| |
|
|||| |||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
42274619 |
agaaccatacgaaaaacacctaaggaattgtacctaagttttctc |
42274663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 55049435 - 55049399
Alignment:
| Q |
20 |
gaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
55049435 |
gaaaagcacctaaggaattgtacataagttttctcca |
55049399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0122 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0122
Description:
Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 45960 - 46006
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcca |
56 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
45960 |
agaaccataagaaaagcacctaaggaattgtacctaagttttctcca |
46006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 45868 - 45834
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
45868 |
aaaagcacctaaggaattgtacctaagttttctcc |
45834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 26445 - 26405
Alignment:
| Q |
15 |
cataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26445 |
catacgaaaagcacctaaggaattgtacctaagttttctcc |
26405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0163 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0163
Description:
Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 2077 - 2111
Alignment:
| Q |
21 |
aaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2077 |
aaaagcacctaaggaattgtacctaagttttctcc |
2111 |
T |
|
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Target: scaffold0107 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 51108 - 51063
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
51108 |
agaaccatacgaaaaggacctaaggaattgtacctaagttttctcc |
51063 |
T |
|
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Target: scaffold0107; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 51189 - 51234
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaagaaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
51189 |
agaaccatatgaaaagtacctaaggaattgtacctaagttttctcc |
51234 |
T |
|
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Target: scaffold0595 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0595
Description:
Target: scaffold0595; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 5831 - 5878
Alignment:
| Q |
10 |
agaagcataggaaaagcacctaag--aaattgtacctaagttttctcc |
55 |
Q |
| |
|
|||| |||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
5831 |
agaaccatacgaaaagcacctaaggaaaattgtacctaagttttctcc |
5878 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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