View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16699_low_4 (Length: 651)
Name: NF16699_low_4
Description: NF16699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16699_low_4 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 509; Significance: 0; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 13 - 549
Target Start/End: Complemental strand, 34114358 - 34113822
Alignment:
| Q |
13 |
attattctaatgaagtagtatatcacatgtattattaatataatgtacctaatgatgactttgatcatttctagcaaagctattggtgggatgtcaattg |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
34114358 |
attattctaatgaagtagtatatcacatgtattattaatataatgtacctaatgatgactttgatcatttcgagcaaagctattggtgggatgtcaattg |
34114259 |
T |
|
| Q |
113 |
atatttttgtctttgtacgctcttccttacctttttcgaaagtgacatcgagttcattcagggtaaaaagtagtatatggaaacgtacatattatattca |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
34114258 |
atatttttgtctttgtacgctcttccttacctttttcgaaagtgacatcgagttcattcagggtaaaaagtagtatatgaaaacgtacatattatattca |
34114159 |
T |
|
| Q |
213 |
acaaaatatatggagtatttgataatataatgcgaaattattattattttataatcaaagtattcattaaaagaagtataaaagatacttaagttaacca |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34114158 |
acaaaatatatggagtatttgataatataatgcaaaattattattattttataatcaaagtattcattaaaagaagtataaaagatacttaagttaacca |
34114059 |
T |
|
| Q |
313 |
ctttgatacagctcaaatcaaagggttaatccaccaaattgcaaacacatgacataggatataattcagaatttaattaatcagaagtggtgatcgattt |
412 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34114058 |
cgttgatacagctcaaatcaaagggttaatccaccaaattgcaaacacatgacataggatataattcagaatttaattaatcagaagtggtgatcgattt |
34113959 |
T |
|
| Q |
413 |
ttgctcgaagaatttttgcatgacaataattatttttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaagg |
512 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
34113958 |
ttgctcgaagaatttttgcatgacaataattatttttggatgtgtggtgtatgttccaatttctccaccaaaacgcactaagatgagtcctcaaagaagg |
34113859 |
T |
|
| Q |
513 |
ttgaaaatatatgttggatataaatttcaatctatta |
549 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34113858 |
ttgaaaatatatgttggatataaatttcaatctatta |
34113822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 548 - 633
Target Start/End: Complemental strand, 34113532 - 34113447
Alignment:
| Q |
548 |
tataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34113532 |
tataaagtatcttgaaccaacaacaggagatttatttatagcgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
34113447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 95; Significance: 4e-46; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 444 - 621
Target Start/End: Complemental strand, 18774611 - 18774436
Alignment:
| Q |
444 |
atttttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaat |
543 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||| ||||||||| |||||||||||||||| ||| || || |
|
|
| T |
18774611 |
atttttggatgtgtggtgtatgttccaatttctccaccacaacacactaagatgggtcctcaatgaaggttgagaatatatgttggatatgaatctccat |
18774512 |
T |
|
| Q |
544 |
ctattataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatc |
621 |
Q |
| |
|
| |||||||||||||| ||||| || |||||||||||||||||| || | |||| ||||||||| ||||||||||| |
|
|
| T |
18774511 |
caattataaagtatctcgaacccacgacaggagatttatttata--gctcgatttgttgattgtcactttgatgaatc |
18774436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 447 - 633
Target Start/End: Original strand, 23424923 - 23425107
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
23424923 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaataaggttgggaatatatgttggatatgaatctccatcta |
23425022 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||| | || | |||| |||||||||| |||||||||| ||| || ||||| |
|
|
| T |
23425023 |
ttataaagtatctcgaacccacgacaggagatttatttaca--gctcgatttgctgattgtcactttgatgaattaaatttcccaac |
23425107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 633
Target Start/End: Complemental strand, 27682342 - 27682158
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
27682342 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatatgttggatatgaatctccatcta |
27682243 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||| | || | |||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
27682242 |
ttataaagtatctcgaacccacgacaggagatttatttaca--gctcgatttgctgattgtcactttgatgaatcaaatttcccaac |
27682158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 633
Target Start/End: Original strand, 37207151 - 37207335
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
37207151 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatatgttggatatgaatctccatcta |
37207250 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||| | || | |||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
37207251 |
ttataaagtatctcgaacccacgacaggagatttatttaca--gctcgatttgctgattgtcactttgatgaatcaaatttcccaac |
37207335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 444 - 633
Target Start/End: Original strand, 21245114 - 21245301
Alignment:
| Q |
444 |
atttttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaat |
543 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||||||||| ||| || || |
|
|
| T |
21245114 |
atttttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatacgttggatatgaatctccat |
21245213 |
T |
|
| Q |
544 |
ctattataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||||||||||| | || ||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
21245214 |
caattataaagtatcttgagcccacaacaggagatttatttaca--gctaggtttgctgattgtcactttgatgaatcaaatttcccaac |
21245301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 633
Target Start/End: Complemental strand, 12431600 - 12431416
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
12431600 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatatgttggatatgaatctccatcta |
12431501 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||| | || | |||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
12431500 |
ttataaagtatctcgaacccacgacaggagatttatttaca--gctcgatttgctgattgtcactttgatgaatcaaatttcccaac |
12431416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 633
Target Start/End: Original strand, 29331106 - 29331290
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
29331106 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatatgttggatatgaatctccatcta |
29331205 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||| | || | |||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
29331206 |
ttataaagtatctcgaacccacgacaggagatttatttaca--gctcgatttgctgattgtcactttgatgaatcaaatttcccaac |
29331290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 633
Target Start/End: Original strand, 42408548 - 42408732
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
42408548 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatatgttggatatgaatctccatcta |
42408647 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||| | || | |||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
42408648 |
ttataaagtatctcgaacccacgacaggagatttatttaca--gctcgatttgctgattgtcactttgatgaatcaaatttcccaac |
42408732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 447 - 633
Target Start/End: Complemental strand, 48304128 - 48303944
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||||||||||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
48304128 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgtactaagattggtcctcaaagaaggttgggaatatatgttggatatgaatctccatcta |
48304029 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||| | | | |||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
48304028 |
ttataaagtatctcgaacccacgacaggagatttatttaca--tctcgatttgctgattgtcactttgatgaatcaaatttcccaac |
48303944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 444 - 633
Target Start/End: Complemental strand, 12438067 - 12437880
Alignment:
| Q |
444 |
atttttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaat |
543 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| ||||||||| ||| || || |
|
|
| T |
12438067 |
atttttggatgtgtggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatacgttggatatgaatctccat |
12437968 |
T |
|
| Q |
544 |
ctattataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
| ||||||||||||||||| || |||||| |||||||||||| | || ||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
12437967 |
caattataaagtatcttgagcccacaacatgagatttatttaca--gctaggtttgctgattgtcactttgatgaatcaaatttcccaac |
12437880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 447 - 633
Target Start/End: Complemental strand, 913563 - 913379
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
913563 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgcactaaaatgggtcctcaaagaaggttgggaatatatgttggatatgaatctccatcta |
913464 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || ||| |||||||||||| | || |||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
913463 |
ttataaagtatctcgaacccacgacatgagatttatttaca--gcttgatttgctgattgtcactttgatgaatcaaatttcccaac |
913379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 444 - 577
Target Start/End: Complemental strand, 13756086 - 13755953
Alignment:
| Q |
444 |
atttttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaat |
543 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||| ||| |||||||| ||||||| ||||||||| ||| || ||||||||| ||| || || |
|
|
| T |
13756086 |
atttttggatgtgcggtgtatgtcccaatttctccaccacaacgcactaagatgggtcctcagagaaggttgggaatgtaagttggatatgaatctccat |
13755987 |
T |
|
| Q |
544 |
ctattataaagtatcttgaaccaacaacaggaga |
577 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||| |
|
|
| T |
13755986 |
ctataataaagtatcttgaaccaacaacaagaga |
13755953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 633
Target Start/End: Original strand, 28516715 - 28516899
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
28516715 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatatgttggatatgaatctccatcta |
28516814 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||| | || | |||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
28516815 |
ttataaagtatctcgaacccacgacaggagatttatttaca--gctcgatttgctgattgtcactttgatgaatcaaatttcccaac |
28516899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 447 - 633
Target Start/End: Original strand, 38988542 - 38988726
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
38988542 |
tttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatatgttggatatgaatctccatcta |
38988641 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||||| | || | |||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
38988642 |
ttataaagtatctcgaacccacgacaggagatttatttaca--gctcgatttgctgattgtcactttgatgaatcaaatttcccaac |
38988726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 444 - 633
Target Start/End: Original strand, 29182963 - 29183150
Alignment:
| Q |
444 |
atttttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaat |
543 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||||| ||||||||| ||| || || |
|
|
| T |
29182963 |
atttttggatgtgcggtgtatgttccaatttctccaccacaacgcactaagatgagtcctcaatgaaggttgggaatatacgttggatatgaatctccat |
29183062 |
T |
|
| Q |
544 |
ctattataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
| |||||||| |||||||| || ||||||||||||||||||| | || ||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
29183063 |
caattataaactatcttgagcccacaacaggagatttatttaca--gctaggtttgctgattgtcactttgatgaatcaaatttcccaac |
29183150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 446 - 623
Target Start/End: Original strand, 1492189 - 1492364
Alignment:
| Q |
446 |
ttttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatct |
545 |
Q |
| |
|
||||||||||| |||||||||||| ||| |||||||| || |||||||| ||||||||||||||||| |||||||||||||||| ||| | |||| |
|
|
| T |
1492189 |
ttttggatgtgcggtgtatgttcctattcctccaccacaatgcactaagatgggtcctcaaagaaggttgggaatatatgttggatatgaatcttcatct |
1492288 |
T |
|
| Q |
546 |
attataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaa |
623 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| || ||| | |||| ||||||||||||||||| |||||| |
|
|
| T |
1492289 |
attataaagtatctcaaaccaacaacatgagatttatt--tactgctcgatttgctgattgtcattttgattaatcaa |
1492364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 444 - 633
Target Start/End: Complemental strand, 2980956 - 2980769
Alignment:
| Q |
444 |
atttttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaat |
543 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||| || || |
|
|
| T |
2980956 |
atttttggatgtgcggtgtatgttccaatttttccaccacaacgcactaagatgggtcctcaaagaaggttgggaatatatgttggatatgaatctccat |
2980857 |
T |
|
| Q |
544 |
ctattataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
| ||||||||||||||||| || |||| |||||||||||||| | || ||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
2980856 |
caattataaagtatcttgagcccacaataggagatttatttaca--gctaggtttgctgattgtcactttgatgaatcaaatttcccaac |
2980769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 447 - 633
Target Start/End: Complemental strand, 25414506 - 25414322
Alignment:
| Q |
447 |
tttggatgtgtggtgtatgttccaatttctccaccaaaacattctaagatgagtcctcaaagaaggttgaaaatatatgttggatataaatttcaatcta |
546 |
Q |
| |
|
|||||||||| ||||||||||| || ||| ||||| | | |||||||| ||||||||| |||||||| |||||||||||||||| ||| || ||||| |
|
|
| T |
25414506 |
tttggatgtgcagtgtatgttcctatatctgcaccacagcgcactaagatgggtcctcaaacaaggttgagaatatatgttggatatgaatctccatcta |
25414407 |
T |
|
| Q |
547 |
ttataaagtatcttgaaccaacaacaggagatttatttatagtgcccaatttactgattgtcattttgatgaatcaaagtttccaac |
633 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||| ||||| | | ||||||||||| |||||||||||||||||| || ||||| |
|
|
| T |
25414406 |
ttataaagtatcttaaaccaacaatgggagattcatttaca--acatgatttactgattttcattttgatgaatcaaatttcccaac |
25414322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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