View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16701_low_38 (Length: 246)

Name: NF16701_low_38
Description: NF16701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16701_low_38
NF16701_low_38
[»] chr4 (16 HSPs)
chr4 (1-241)||(24613728-24613970)
chr4 (141-196)||(39655345-39655402)
chr4 (46-99)||(23293048-23293101)
chr4 (46-99)||(31603071-31603124)
chr4 (1-33)||(1074798-1074830)
chr4 (1-41)||(4383360-4383399)
chr4 (1-41)||(11651161-11651201)
chr4 (166-194)||(11907057-11907085)
chr4 (1-41)||(12895301-12895341)
chr4 (59-99)||(15029715-15029755)
chr4 (1-41)||(19482660-19482700)
chr4 (1-41)||(23293013-23293053)
chr4 (1-41)||(27706204-27706244)
chr4 (1-41)||(36635316-36635356)
chr4 (64-100)||(46084046-46084082)
chr4 (1-33)||(54580050-54580082)
[»] chr8 (17 HSPs)
chr8 (1-100)||(29447137-29447236)
chr8 (1-99)||(2572083-2572171)
chr8 (158-241)||(9107919-9108010)
chr8 (46-99)||(29510366-29510419)
chr8 (1-41)||(14134691-14134731)
chr8 (1-41)||(15816156-15816196)
chr8 (1-41)||(34897077-34897117)
chr8 (5-43)||(24196628-24196666)
chr8 (1-43)||(39954306-39954348)
chr8 (48-101)||(24413624-24413677)
chr8 (46-98)||(926850-926902)
chr8 (1-41)||(13436991-13437031)
chr8 (1-41)||(13844623-13844663)
chr8 (1-41)||(22651968-22652008)
chr8 (1-41)||(31236604-31236644)
chr8 (5-41)||(36450785-36450821)
chr8 (1-41)||(41838150-41838190)
[»] scaffold0227 (2 HSPs)
scaffold0227 (141-196)||(15754-15810)
scaffold0227 (1-41)||(7338-7378)
[»] chr1 (19 HSPs)
chr1 (58-100)||(18190174-18190216)
chr1 (1-41)||(1262876-1262916)
chr1 (1-41)||(10572616-10572656)
chr1 (1-41)||(12443487-12443527)
chr1 (1-41)||(22881643-22881683)
chr1 (1-41)||(38078688-38078728)
chr1 (46-99)||(398827-398880)
chr1 (1-42)||(9828035-9828076)
chr1 (58-99)||(10577809-10577850)
chr1 (1-34)||(34298435-34298468)
chr1 (59-96)||(40456031-40456068)
chr1 (1-41)||(113291-113331)
chr1 (1-41)||(609485-609525)
chr1 (1-41)||(2896148-2896188)
chr1 (63-99)||(24334774-24334810)
chr1 (1-33)||(24577213-24577245)
chr1 (1-41)||(32461490-32461530)
chr1 (1-41)||(36878453-36878493)
chr1 (5-41)||(37598824-37598860)
[»] scaffold0053 (1 HSPs)
scaffold0053 (46-99)||(8742-8795)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-41)||(13392-13432)
[»] scaffold0152 (1 HSPs)
scaffold0152 (1-41)||(21895-21935)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-41)||(26385-26425)
[»] scaffold0021 (1 HSPs)
scaffold0021 (48-99)||(130426-130477)
[»] chr6 (25 HSPs)
chr6 (1-43)||(25096413-25096455)
chr6 (141-196)||(27994378-27994435)
chr6 (1-41)||(853886-853926)
chr6 (46-98)||(10339188-10339240)
chr6 (1-41)||(13360399-13360439)
chr6 (46-98)||(16766642-16766694)
chr6 (1-41)||(34595126-34595166)
chr6 (1-40)||(7801183-7801222)
chr6 (46-100)||(426576-426630)
chr6 (1-43)||(7086785-7086827)
chr6 (46-100)||(8777035-8777089)
chr6 (1-43)||(8805599-8805641)
chr6 (3-41)||(16833300-16833338)
chr6 (62-100)||(34225879-34225917)
chr6 (46-95)||(5732572-5732621)
chr6 (46-99)||(7938060-7938113)
chr6 (1-41)||(5970135-5970175)
chr6 (1-41)||(8365546-8365586)
chr6 (5-41)||(8777004-8777040)
chr6 (1-41)||(9024203-9024243)
chr6 (1-41)||(10770701-10770741)
chr6 (1-33)||(17302347-17302379)
chr6 (1-41)||(17841616-17841656)
chr6 (1-41)||(19040344-19040384)
chr6 (1-41)||(19044456-19044496)
[»] chr5 (18 HSPs)
chr5 (46-99)||(15382421-15382474)
chr5 (110-196)||(36869453-36869538)
chr5 (4-43)||(38464394-38464433)
chr5 (1-43)||(35017027-35017069)
chr5 (46-99)||(6326359-6326412)
chr5 (1-34)||(19579700-19579733)
chr5 (46-99)||(21522694-21522747)
chr5 (46-99)||(21533260-21533313)
chr5 (46-99)||(36642824-36642876)
chr5 (1-41)||(6247614-6247654)
chr5 (1-33)||(6770543-6770575)
chr5 (1-41)||(14674261-14674301)
chr5 (1-33)||(22423839-22423871)
chr5 (1-41)||(31084315-31084355)
chr5 (1-41)||(33178017-33178057)
chr5 (47-99)||(34276801-34276853)
chr5 (1-41)||(39205872-39205912)
chr5 (1-41)||(41995463-41995503)
[»] chr3 (22 HSPs)
chr3 (1-99)||(750645-750734)
chr3 (1-42)||(34910308-34910349)
chr3 (1-41)||(10954944-10954984)
chr3 (1-41)||(11493388-11493428)
chr3 (59-99)||(21479068-21479108)
chr3 (60-99)||(35994813-35994852)
chr3 (1-39)||(3164052-3164090)
chr3 (46-84)||(8383216-8383254)
chr3 (46-100)||(10335348-10335402)
chr3 (1-34)||(8412972-8413005)
chr3 (58-99)||(14027959-14028000)
chr3 (1-42)||(14209104-14209145)
chr3 (46-99)||(15796356-15796409)
chr3 (1-34)||(24633765-24633798)
chr3 (1-42)||(28812506-28812547)
chr3 (1-34)||(55401074-55401107)
chr3 (1-41)||(2620080-2620120)
chr3 (44-100)||(3164085-3164141)
chr3 (1-41)||(4987318-4987358)
chr3 (1-41)||(12703999-12704039)
chr3 (1-41)||(40052324-40052364)
chr3 (1-41)||(46191372-46191412)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-41)||(14522-14562)
[»] chr7 (20 HSPs)
chr7 (47-99)||(9778452-9778504)
chr7 (4-40)||(28401136-28401172)
chr7 (1-98)||(35861903-35861996)
chr7 (159-195)||(36903183-36903219)
chr7 (1-43)||(21141009-21141051)
chr7 (46-99)||(1433398-1433451)
chr7 (1-34)||(3991323-3991356)
chr7 (1-42)||(11831423-11831464)
chr7 (46-107)||(26329444-26329505)
chr7 (1-41)||(5307252-5307292)
chr7 (1-33)||(11665467-11665499)
chr7 (1-41)||(22868034-22868074)
chr7 (1-33)||(23746910-23746942)
chr7 (1-41)||(24339634-24339674)
chr7 (1-41)||(25481894-25481934)
chr7 (1-41)||(26733296-26733336)
chr7 (1-41)||(27945033-27945073)
chr7 (1-41)||(32308112-32308152)
chr7 (100-132)||(36903583-36903615)
chr7 (1-41)||(41020488-41020528)
[»] chr2 (10 HSPs)
chr2 (58-100)||(1572363-1572405)
chr2 (100-137)||(37622604-37622641)
chr2 (1-41)||(11670747-11670787)
chr2 (1-41)||(12940962-12941002)
chr2 (1-41)||(20539701-20539741)
chr2 (1-41)||(21616754-21616794)
chr2 (1-41)||(21782845-21782885)
chr2 (59-99)||(26769461-26769501)
chr2 (9-41)||(33498620-33498652)
chr2 (1-41)||(36756371-36756411)
[»] scaffold0027 (1 HSPs)
scaffold0027 (46-99)||(46626-46679)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-41)||(20164-20204)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-41)||(8002-8042)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-41)||(51803-51843)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-33)||(17776-17808)


Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 24613728 - 24613970
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgggacgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24613728 attatgtgattttctcaaattattagttgtgtcgacgtgtcggaacgtgtcagtgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcataga 24613827  T
Q  101 gtactactaagtactaccccactaaaataaataaattc--tttgagaactctaataccatgtgtttctttccttattctctttctctcttctgatactgc 198  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24613828 gtactactaagtactaccccactaaaataaataaattctttttgagaactctgataccatgtgtttctttccttattctctttctctcttctgatactgc 24613927  T
Q  199 attacaccaccaccactcctccatcggacttccctttgcttct 241  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  24613928 attacaccaccaccactcctccatcggacttcccttttcttct 24613970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 39655402 - 39655345
Alignment:
Q  141 tgagaactctaataccat--gtgtttctttccttattctctttctctcttctgatact 196  Q
    |||||||||| ||||||   |||||||||||||||||||||||||||||||| |||||    
T  39655402 tgagaactctgataccacccgtgtttctttccttattctctttctctcttctaatact 39655345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 23293048 - 23293101
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||  ||||||||||    
T  23293048 cgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgcttcatag 23293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 31603071 - 31603124
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| | |||||||||||| | ||||||||||| |||||||| ||||||||    
T  31603071 cgtgtcagtattcgtgtcgtgttcggtgtccatgtctgtatccatacttcatag 31603124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1074830 - 1074798
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtc 33  Q
    ||||||||||||||||||||||||||| |||||    
T  1074830 attatgtgattttctcaaattattagtggtgtc 1074798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4383399 - 4383360
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  4383399 attatgtgatttt-tcaaattattagttgtatcgacgtgtc 4383360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11651161 - 11651201
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| | |||||||||| ||||||||||||||    
T  11651161 attatgtgatttttttaaattattagctgtgtcgacgtgtc 11651201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 11907085 - 11907057
Alignment:
Q  166 tttccttattctctttctctcttctgata 194  Q
    |||||||||||||||||||||||||||||    
T  11907085 tttccttattctctttctctcttctgata 11907057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12895301 - 12895341
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| ||||||||||| |||||||| ||||||    
T  12895301 attatgtgattttttcaaattattatttgtgtcggcgtgtc 12895341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 15029755 - 15029715
Alignment:
Q  59 gtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||||||| || ||||||||||||||| ||||||||||    
T  15029755 gtgtcgtgtccggtctccatgtccgtatccctgcttcatag 15029715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19482700 - 19482660
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||| || |||||||||||||||||||| ||||||    
T  19482700 attatgtgatattttcaaattattagttgtgtcggcgtgtc 19482660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23293013 - 23293053
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  23293013 attatgtgattttttcaaattattagctgtgtcggcgtgtc 23293053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27706204 - 27706244
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| | ||||||||| |||||||||||||||    
T  27706204 attatgtgatttttttaaattattaattgtgtcgacgtgtc 27706244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36635356 - 36635316
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||| |||| | ||||||    
T  36635356 attatgtgattttctcaaattattagtggtgttggcgtgtc 36635316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 46084046 - 46084082
Alignment:
Q  64 gtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    |||||| |||||| |||||||||||||||||||||||    
T  46084046 gtgtccggtgtccgtgtccgtatccatgcttcataga 46084082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 54580050 - 54580082
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtc 33  Q
    ||||||||||||| |||||||||||||||||||    
T  54580050 attatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 29447137 - 29447236
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgggacgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||||    
T  29447137 attatgtgattttctcaaattattagttgtgtcgacgtgtcgggacgtgtcggtgtccgtgtcgtgtccagtgtccatgtccgtatctatgcttcataga 29447236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2572083 - 2572171
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgggacgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||||||||| |||||||||||| |||||||||||||||| |          | ||||||||||||||||||| ||||||||||||||||||||||    
T  2572083 attatgtgattttttcaaattattaggtgtgtcgacgtgtcggta----------tccgtgtcgtgtccagtgtccgtgtccgtatccatgcttcatag 2572171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 9107919 - 9108010
Alignment:
Q  158 tgtgtttctttccttattctctttctctcttctgatact--------gcattacaccaccaccactcctccatcggacttccctttgcttct 241  Q
    |||||||||||||||||||||||||||||||||||| ||        |  ||||| |||||||||||||||||| ||||||||||| |||||    
T  9107919 tgtgtttctttccttattctctttctctcttctgattctcatacgacgtgttacatcaccaccactcctccatcagacttccctttccttct 9108010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 29510366 - 29510419
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| ||||||||||| |||||| ||||||||||    
T  29510366 cgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatccgtgcttcatag 29510419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14134731 - 14134691
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  14134731 attatgtgattttctcaaattattagtattgtcgacgtgtc 14134691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15816156 - 15816196
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  15816156 attatgtgattttttcaaattattagttgtgtcggcgtgtc 15816196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34897117 - 34897077
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  34897117 attatgtgattttctcaaattattagcggtgtcgacgtgtc 34897077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 24196628 - 24196666
Alignment:
Q  5 tgtgattttctcaaattattagttgtgtcgacgtgtcgg 43  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcgg 24196666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39954306 - 39954348
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgg 43  Q
    ||||||||||||||||||||||||||  |||||| ||||||||    
T  39954306 attatgtgattttctcaaattattagcggtgtcggcgtgtcgg 39954348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 24413624 - 24413677
Alignment:
Q  48 tgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatagag 101  Q
    ||||| ||| |||||||||||  |||||| ||||||||||| ||||||||||||    
T  24413624 tgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcatagag 24413677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 926850 - 926902
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcata 98  Q
    ||||||| ||| |||||||||||| |||||| ||| ||||||| |||||||||    
T  926850 cgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcata 926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13436991 - 13437031
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  13436991 attatgtgattttttcaaattattagctgtgtcggcgtgtc 13437031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13844623 - 13844663
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  13844623 attatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22652008 - 22651968
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  22652008 attatgtgattttttcaaattattagctgtgtcggcgtgtc 22651968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31236604 - 31236644
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  31236604 attatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 36450785 - 36450821
Alignment:
Q  5 tgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  36450785 tgtgattttttcaaattattagttgtgtcggcgtgtc 36450821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41838150 - 41838190
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| | |||||||||| ||||||||||||||    
T  41838150 attatgtgatttttttaaattattagctgtgtcgacgtgtc 41838190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 15754 - 15810
Alignment:
Q  141 tgagaactctaataccatg-tgtttctttccttattctctttctctcttctgatact 196  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  15754 tgagaactctaataccaccatgtttctttccttattctctttctctcttctgatact 15810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7338 - 7378
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||||||  ||||||||||||||||||| ||||||    
T  7338 attatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 18190174 - 18190216
Alignment:
Q  58 cgtgtcgtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  18190174 cgtgtcgtgtccggtgtccatgtccgtatccatgcttcataga 18190216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1262916 - 1262876
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  1262916 attatgtgattttctcaaattattagctgtgtcggcgtgtc 1262876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10572616 - 10572656
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  10572616 attatgtgattttctcaaattattagtggtgtcggcgtgtc 10572656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12443487 - 12443527
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  12443487 attatgtgattttctcaaattattagctgtgtcggcgtgtc 12443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22881643 - 22881683
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  22881643 attatgtgattttttcaaattattagttgtgtcggcgtgtc 22881683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38078688 - 38078728
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  38078688 attatgtgattttttcaaattattagctgtgtcgacgtgtc 38078728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 398827 - 398880
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| ||||||  |||||||||| ||||||||||    
T  398827 cgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcatag 398880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9828076 - 9828035
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcg 42  Q
    ||||||||||||| ||||||||||||| |||||| |||||||    
T  9828076 attatgtgattttatcaaattattagtggtgtcggcgtgtcg 9828035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 10577809 - 10577850
Alignment:
Q  58 cgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    |||||||||||| |||||| ||||||||||| ||||||||||    
T  10577809 cgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34298468 - 34298435
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcg 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  34298468 attatgtgattttctcaaattattagtggtgtcg 34298435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 40456031 - 40456068
Alignment:
Q  59 gtgtcgtgtccagtgtccatgtccgtatccatgcttca 96  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  40456031 gtgtcgtgtccggtgtccgtgtccgtatccatgcttca 40456068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 113331 - 113291
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  113331 attatgtgattttttcaaattattagctgtgtcggcgtgtc 113291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 609485 - 609525
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||| ||||||||||||||||||| |||||| ||||||    
T  609485 attatgtaattttctcaaattattagtggtgtcggcgtgtc 609525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2896148 - 2896188
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  2896148 attatgtgattttctcaaattattagcggtgtcggcgtgtc 2896188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 24334774 - 24334810
Alignment:
Q  63 cgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  24334774 cgtgtccggtgtccgtgtccgtatccatgcttcatag 24334810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24577213 - 24577245
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtc 33  Q
    ||||||||||||| |||||||||||||||||||    
T  24577213 attatgtgattttttcaaattattagttgtgtc 24577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32461490 - 32461530
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| ||||||||||||||||| || ||||||    
T  32461490 attatgtgattttttcaaattattagttgtgccggcgtgtc 32461530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36878493 - 36878453
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  36878493 attatgtgattttctcaaattattagcggtgtcggcgtgtc 36878453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 37598860 - 37598824
Alignment:
Q  5 tgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  37598860 tgtgattttttcaaattattagttgtgtcggcgtgtc 37598824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 8795 - 8742
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||||||||||||||    
T  8795 cgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcatag 8742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13432 - 13392
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  13432 attatgtgattttctcaaattattagttgtgtcggcgtgtc 13392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21895 - 21935
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  21895 attatgtgattttctcaaattattagttgtgtcggcgtgtc 21935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26425 - 26385
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  26425 attatgtgattttctcaaattattagtggtgtcgacgtgtc 26385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 130477 - 130426
Alignment:
Q  48 tgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||||||||||    
T  130477 tgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcatag 130426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25096455 - 25096413
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgg 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  25096455 attatgtgattttctcaaattattagtggtgtcgtcgtgtcgg 25096413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 27994378 - 27994435
Alignment:
Q  141 tgagaactctaataccat--gtgtttctttccttattctctttctctcttctgatact 196  Q
    |||||||||| ||| |||  |||||||||||||||||||||||||||||| |||||||    
T  27994378 tgagaactctgatatcatccgtgtttctttccttattctctttctctcttatgatact 27994435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 853886 - 853926
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  853886 attatgtgattttttcaaattattagttgtgtcggcgtgtc 853926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 10339188 - 10339240
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcata 98  Q
    ||||||| ||||| |||||||||| ||||||||||| |||||| |||||||||    
T  10339188 cgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccgtgcttcata 10339240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13360399 - 13360439
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  13360399 attatgtgattttctcaaattactagtggtgtcgacgtgtc 13360439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 16766694 - 16766642
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcata 98  Q
    ||||||| ||| | |||||||||| |||||| |||||||||||||||||||||    
T  16766694 cgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34595166 - 34595126
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  34595166 attatgtgattttttcaaattattagttgtgtcggcgtgtc 34595126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7801183 - 7801222
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgt 40  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  7801183 attatgtgattttttcaaattattagttgtgtcggcgtgt 7801222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 426576 - 426630
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    ||||||| ||| |||||||||||| || ||| |||| ||||||||||||||||||    
T  426576 cgtgtcagtgtccgtgtcgtgtccggtatccgtgtctgtatccatgcttcataga 426630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7086827 - 7086785
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgg 43  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  7086827 attatgtgattttctcaaattattagcagtgccgacgtgtcgg 7086785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 8777035 - 8777089
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    ||||||| ||| ||||||||||||  ||||| ||||||||||| |||||||||||    
T  8777035 cgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcataga 8777089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8805599 - 8805641
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgg 43  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  8805599 attatgtgattttctcaaattattagcagtgccgacgtgtcgg 8805641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 16833338 - 16833300
Alignment:
Q  3 tatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  16833338 tatgtgattttttcaaattattagttgtgtcggcgtgtc 16833300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 34225879 - 34225917
Alignment:
Q  62 tcgtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  34225879 tcgtgtccagtgtccgtgtccgtatccgtgcttcataga 34225917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 5732572 - 5732621
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttc 95  Q
    ||||||| ||| | ||||||||||||||||| |||| |||||||||||||    
T  5732572 cgtgtcagtgtccatgtcgtgtccagtgtccgtgtctgtatccatgcttc 5732621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 7938113 - 7938060
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| | |||||||||| |||||| ||||||||||| ||||||||||    
T  7938113 cgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 7938060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5970135 - 5970175
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  5970135 attatgtgattttttcaaattattaactgtgtcgacgtgtc 5970175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8365546 - 8365586
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||| || |||||||||||||||||||| ||||||    
T  8365546 attatgtgatattttcaaattattagttgtgtcggcgtgtc 8365586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 8777004 - 8777040
Alignment:
Q  5 tgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  8777004 tgtgattttttcaaattattagttgtgtcggcgtgtc 8777040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9024203 - 9024243
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||| ||||||||||||||| | |||||||||||||||    
T  9024203 attatgtcattttctcaaattatcatttgtgtcgacgtgtc 9024243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10770701 - 10770741
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||||||||| | ||||||    
T  10770701 attatgtgattttttcaaattattagttgtgttggcgtgtc 10770741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17302379 - 17302347
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  17302379 attatgtgattttcttaaattattagttgtgtc 17302347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17841616 - 17841656
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  17841616 attatgtgattttttcaaattattagctgtgtcggcgtgtc 17841656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19040384 - 19040344
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  19040384 attatgtgattttctcaaattattagcggtgtcggcgtgtc 19040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19044496 - 19044456
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||| |||||||||||||||| |||||| ||||||    
T  19044496 attatgtgatattctcaaattattagtcgtgtcggcgtgtc 19044456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 15382474 - 15382421
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||| ||||||||||    
T  15382474 cgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 15382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 36869538 - 36869453
Alignment:
Q  110 agtactaccccactaaaataaataaattctttgagaactctaataccat--gtgtttctttccttattctctttctctcttctgatact 196  Q
    |||| ||| ||||||||| |||||   |||||||||||||| ||||||   ||||||||||||||||| ||| |||||||| |||||||    
T  36869538 agtagtactccactaaaaaaaata---tctttgagaactctgataccactcgtgtttctttccttattgtctgtctctcttttgatact 36869453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 38464394 - 38464433
Alignment:
Q  4 atgtgattttctcaaattattagttgtgtcgacgtgtcgg 43  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  38464394 atgtgattttctcaaattattagttgtgtcggcatgtcgg 38464433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35017069 - 35017027
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgg 43  Q
    ||||||||||||||||||||||||||| || ||| ||||||||    
T  35017069 attatgtgattttctcaaattattagtggtttcggcgtgtcgg 35017027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 6326359 - 6326412
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| || ||| ||||| ||||||||||||||||    
T  6326359 cgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccatgcttcatag 6326412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19579733 - 19579700
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcg 34  Q
    |||||||||||||||||||||||||| |||||||    
T  19579733 attatgtgattttctcaaattattagctgtgtcg 19579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 21522747 - 21522694
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| ||| || ||||||||||| ||||||||||    
T  21522747 cgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatag 21522694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 21533313 - 21533260
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| ||| || ||||||||||| ||||||||||    
T  21533313 cgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatag 21533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 36642824 - 36642876
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| |||||  ||||||||||||||||||||||    
T  36642824 cgtgtcagtgtccgtgtcgtgtccggtgtct-tgtccgtatccatgcttcatag 36642876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6247654 - 6247614
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  6247654 attatgtgattttttcaaattattagatgtgtcggcgtgtc 6247614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6770575 - 6770543
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  6770575 attatgtgattttcttaaattattagttgtgtc 6770543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14674301 - 14674261
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  14674301 attatgtgattttttcaaattattagctgtgtcggcgtgtc 14674261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22423839 - 22423871
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtc 33  Q
    ||||||||||||||||||||||||||| |||||    
T  22423839 attatgtgattttctcaaattattagtagtgtc 22423871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31084355 - 31084315
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  31084355 attatgtgattttttcaaattattagctgtgtcggcgtgtc 31084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33178057 - 33178017
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| | |||||||||||||||||| ||||||    
T  33178057 attatgtgatttttttaaattattagttgtgtcggcgtgtc 33178017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 34276853 - 34276801
Alignment:
Q  47 gtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||||    
T  34276853 gtgtcaatgtctgtgtcgtgtccggtatccgtgtccgtatccgtgcttcatag 34276801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39205912 - 39205872
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||| ||||||||||||||||||||  |||||||||||||    
T  39205912 attatatgattttctcaaattattagcagtgtcgacgtgtc 39205872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41995503 - 41995463
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| || ||||||||||||||||| ||||||    
T  41995503 attatgtgattttttcgaattattagttgtgtcggcgtgtc 41995463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 750645 - 750734
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgggacgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    |||||||||| || |||||||||||||||||||| ||||||   | |||||      |||||||||||| |||||| ||||||||||| ||||||||||    
T  750645 attatgtgatattttcaaattattagttgtgtcgccgtgtc---aagtgtc------cgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34910349 - 34910308
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcg 42  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  34910349 attatgtgattttttcaaattattagttgtgtcggcgtgtcg 34910308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10954984 - 10954944
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  10954984 attatgtgattttttcaaattattagttgtgtcggcgtgtc 10954944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11493388 - 11493428
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  11493388 attatgtgattttctcacattattagtggtgtcgacgtgtc 11493428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 21479108 - 21479068
Alignment:
Q  59 gtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  21479108 gtgtcgtgtccggtgtccgtgtccgtatccatgcttcatag 21479068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 35994813 - 35994852
Alignment:
Q  60 tgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  35994813 tgtcgtgtccggtgtccatgtccgtatccgtgcttcatag 35994852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3164052 - 3164090
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtg 39  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  3164052 attatgtgattttttcaaattattagctgtgtcgacgtg 3164090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 8383254 - 8383216
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgt 84  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  8383254 cgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgt 8383216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 10335348 - 10335402
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    ||||||| ||| |||||||||||| |||||| ||| ||||||| |||||||||||    
T  10335348 cgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcataga 10335402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8412972 - 8413005
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcg 34  Q
    |||||||| |||||||||||||||||||||||||    
T  8412972 attatgtgtttttctcaaattattagttgtgtcg 8413005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 14028000 - 14027959
Alignment:
Q  58 cgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    |||||||||||| |||||| ||||||||||| ||||||||||    
T  14028000 cgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 14027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14209145 - 14209104
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcg 42  Q
    ||||||||||||| | |||||||||||||||||| |||||||    
T  14209145 attatgtgattttttaaaattattagttgtgtcggcgtgtcg 14209104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 15796356 - 15796409
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| |||||||||||| |||||| ||||| ||||| ||||||||||    
T  15796356 cgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcatag 15796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24633798 - 24633765
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcg 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  24633798 attatgtgattttctcaaattattagtggtgtcg 24633765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28812547 - 28812506
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcg 42  Q
    ||||||||||||  |||||||||||||||||||| |||||||    
T  28812547 attatgtgatttcttcaaattattagttgtgtcggcgtgtcg 28812506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 55401107 - 55401074
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcg 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  55401107 attatgtgattttttcaaattattagttgtgtcg 55401074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2620080 - 2620120
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||||||||||||| |||||| |||||| ||||||    
T  2620080 attatgtgattttctcaaatgattagtggtgtcggcgtgtc 2620120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 3164085 - 3164141
Alignment:
Q  44 gacgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    |||||| || ||| |||||||||||| |||||| |||| |||||| |||||||||||    
T  3164085 gacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcataga 3164141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4987318 - 4987358
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  4987318 attatgtgattttttcaaattattagctgtgtcggcgtgtc 4987358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12704039 - 12703999
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||| |||||||||||||||||| |||||| ||||||    
T  12704039 attatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40052364 - 40052324
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  40052364 attatgtgattttttcaaattattagctgtgtcggcgtgtc 40052324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46191372 - 46191412
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||| | ||||||| |||||    
T  46191372 attatgtgattttctcaaattattattggtgtcgatgtgtc 46191412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14562 - 14522
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  14562 attatgtgattttttcaaattattagttgtgtcggcgtgtc 14522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 9778504 - 9778452
Alignment:
Q  47 gtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    |||||| ||| |||||||||||| |||||| ||||||||||| ||||||||||    
T  9778504 gtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 9778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 28401172 - 28401136
Alignment:
Q  4 atgtgattttctcaaattattagttgtgtcgacgtgt 40  Q
    |||||||||||||||||||||||| ||||||||||||    
T  28401172 atgtgattttctcaaattattagtagtgtcgacgtgt 28401136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35861996 - 35861903
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgggacgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcata 98  Q
    ||||||||||||| |||||||||||||||||||| |||||      |||| | |||  ||||||||||| ||||||  |||||||||| |||||||||    
T  35861996 attatgtgattttttcaaattattagttgtgtcggcgtgt----tagtgttagtgtctgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcata 35861903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 36903219 - 36903183
Alignment:
Q  159 gtgtttctttccttattctctttctctcttctgatac 195  Q
    ||||||||||| |||||||||||||||||||||||||    
T  36903219 gtgtttctttcgttattctctttctctcttctgatac 36903183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21141009 - 21141051
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcgg 43  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||    
T  21141009 attatatgattttcttaaattattagtggtgtcgacgtgtcgg 21141051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 1433451 - 1433398
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||||||| |||||||||| | |||||| || |||||||| ||||||||||    
T  1433451 cgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcatag 1433398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3991356 - 3991323
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcg 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  3991356 attatgtgattttttcaaattattagttgtgtcg 3991323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11831464 - 11831423
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtcg 42  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||    
T  11831464 attatatgattttttcaaattattagttgtgtcgatgtgtcg 11831423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 26329444 - 26329505
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatagagtactac 107  Q
    ||||||| |||  |||||||||||||||||| |||| |||| | |||||||||| |||||||    
T  26329444 cgtgtcagtgtctgtgtcgtgtccagtgtccgtgtctgtattcgtgcttcatagggtactac 26329505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5307292 - 5307252
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||| ||| |||||| ||||||    
T  5307292 attatgtgattttctcaaattataagtggtgtcggcgtgtc 5307252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11665467 - 11665499
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtc 33  Q
    ||||||||||||| |||||||||||||||||||    
T  11665467 attatgtgattttttcaaattattagttgtgtc 11665499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22868074 - 22868034
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||| ||||||||| |||||| ||||||    
T  22868074 attatgtgattttctcatattattagtggtgtcggcgtgtc 22868034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23746942 - 23746910
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtc 33  Q
    ||||||||||||||||||||||| |||||||||    
T  23746942 attatgtgattttctcaaattataagttgtgtc 23746910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24339674 - 24339634
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  24339674 attatgtgattttttcaaattattagctgtgtcggcgtgtc 24339634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25481934 - 25481894
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  25481934 attatgtgattttttcaaattattagctgtgtcggcgtgtc 25481894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26733336 - 26733296
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| ||||||||||||  |||||||||||||    
T  26733336 attatgtgattttgtcaaattattagcggtgtcgacgtgtc 26733296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27945073 - 27945033
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||| ||||||||||||||||||| |||||| ||||||    
T  27945073 attatgtaattttctcaaattattagtggtgtcggcgtgtc 27945033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32308152 - 32308112
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  32308152 attatgtgattttctcaaattattagcggtgtcggcgtgtc 32308112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 36903615 - 36903583
Alignment:
Q  100 agtactactaagtactaccccactaaaataaat 132  Q
    |||||||||||||||||||| ||||||||||||    
T  36903615 agtactactaagtactaccctactaaaataaat 36903583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41020528 - 41020488
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    |||||||||||||   |||||||||||||||||||||||||    
T  41020528 attatgtgatttttgtaaattattagttgtgtcgacgtgtc 41020488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 1572363 - 1572405
Alignment:
Q  58 cgtgtcgtgtccagtgtccatgtccgtatccatgcttcataga 100  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||    
T  1572363 cgtgtcgtgtccagtgttcatgtccatattcatgcttcataga 1572405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 37622641 - 37622604
Alignment:
Q  100 agtactactaagtactaccccactaaaataaataaatt 137  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  37622641 agtactactaagtactaccccactaaaaaaaacaaatt 37622604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11670787 - 11670747
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| ||||||||||||| | |||||||||||    
T  11670787 attatgtgattttttcaaattattagtggcgtcgacgtgtc 11670747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12940962 - 12941002
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||| ||||||| ||||||||||||||||||| |||||||    
T  12940962 attatatgattttttcaaattattagttgtgtcaacgtgtc 12941002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20539701 - 20539741
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||| ||||||| |||||||||||| ||||||||||||||    
T  20539701 attatatgattttttcaaattattagctgtgtcgacgtgtc 20539741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21616794 - 21616754
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  21616794 attatgtgattttctcaaattattagcggtgtcggcgtgtc 21616754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21782845 - 21782885
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  21782845 attatgtgattttctcaaattattagcagtgtcggcgtgtc 21782885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 26769501 - 26769461
Alignment:
Q  59 gtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||||||| |||||| ||||||||||| ||||||||||    
T  26769501 gtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 26769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 33498652 - 33498620
Alignment:
Q  9 attttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||||||| |||||||||||||||    
T  33498652 attttctcaaattattacttgtgtcgacgtgtc 33498620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36756371 - 36756411
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  36756371 attatgttatttcttcaaattattagttgtgtcgacgtgtc 36756411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 46679 - 46626
Alignment:
Q  46 cgtgtcaatgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 99  Q
    ||||||| ||| ||||||||||||  ||||| ||||||||||| ||||||||||    
T  46679 cgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcatag 46626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20204 - 20164
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  20204 attatgtgattttttcaaattattagctgtgtcggcgtgtc 20164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8042 - 8002
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||| ||||||| |||||||||||||||||||| ||||||    
T  8042 attatatgattttttcaaattattagttgtgtcggcgtgtc 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51843 - 51803
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtcgacgtgtc 41  Q
    ||||||||||||| |||||||||||| ||||||| ||||||    
T  51843 attatgtgattttttcaaattattagctgtgtcggcgtgtc 51803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 17776 - 17808
Alignment:
Q  1 attatgtgattttctcaaattattagttgtgtc 33  Q
    ||||||||||||| |||||||||||||||||||    
T  17776 attatgtgattttttcaaattattagttgtgtc 17808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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