View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16701_low_43 (Length: 226)
Name: NF16701_low_43
Description: NF16701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16701_low_43 |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 44824459 - 44824655
Alignment:
| Q |
12 |
caaaggaccaaaaaacagcacctatatgagcagccaaagatagttcacagtgcccatgtctagcagcagcaaataaaggcacagctggaccgaaaacaat |
111 |
Q |
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| T |
44824459 |
caaagaaccaaaaaacagcacctatatgagcagccaaagatagttcacagtgcccatgtctagcagcagcaaataaaggcacagctggaccgaaaacaat |
44824558 |
T |
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| Q |
112 |
atagaacacagcaggtcccaaataggcttcctcttatcccaaaatgcaatcccttggattcgaacaccattcataatacaaacaactaggggtattt |
208 |
Q |
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| T |
44824559 |
atagaacacagcaggtcccaaataggcttcctcttatcccaaaatgcaatcccttggattcgaacaccattcataacacaaacaactaggggtattt |
44824655 |
T |
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