View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16701_low_6 (Length: 483)
Name: NF16701_low_6
Description: NF16701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16701_low_6 |
 |  |
|
| [»] scaffold0038 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 419; Significance: 0; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 13 - 470
Target Start/End: Complemental strand, 26654927 - 26654465
Alignment:
| Q |
13 |
aatatgacctcttgaactaaatgattaattaatcatgcacacacaattattagtgtaagttgcaatattgaatgcttaattatacaattgtaacataatt |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26654927 |
aatatgacctcttgaactaaatgattaattaaccatgcacacacaattattagtgtaagttgcaatattgaatgcttaattatacaattgtaacataatt |
26654828 |
T |
 |
| Q |
113 |
tgctagttaacaagattagggtagcatagatctgaaatattatttctttcatatattttctcaagttttggctaccaaagtcaacacttt-----tacta |
207 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26654827 |
tgttagttaacaagattagggtagcatagatctgaaatattatttctttcatatattttctcaagttttggctaccaaagtcaacactttaattttacta |
26654728 |
T |
 |
| Q |
208 |
ccatgtcaagtccgaaacttccttctcattttccatgtggactctttcctttgaattttctacatctgtacccatcaatgaaggatggataggttgatga |
307 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26654727 |
ccatgtcaagtccgaaacttccttctcatcttccatgtggacactttcctttaaattttctacatctgtacccatcaatgaaggatggataggttgatga |
26654628 |
T |
 |
| Q |
308 |
agactattaatacttatctaaaccaatgtgtgccttaaaaattaatgtcaatgccttaaaaatcaaactgacattttcaagtgagaccttagaaatgaat |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26654627 |
agactattaatacttatctaaaccaatgtgtgccttaaaaattaatgtcaatgccttaaaaatcaaactgacattttcaagtgagaccttagaaatgaat |
26654528 |
T |
 |
| Q |
408 |
tgacagctgtgatattttgtttagacttcaaaagtcaaaagtggttctgatatgtattatgtg |
470 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26654527 |
tgacagctgtgatattttgtttagacttcaaaagtcaaaagtggttctgatatatattatgtg |
26654465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 13 - 470
Target Start/End: Complemental strand, 26760897 - 26760435
Alignment:
| Q |
13 |
aatatgacctcttgaactaaatgattaattaatcatgcacacacaattattagtgtaagttgcaatattgaatgcttaattatacaattgtaacataatt |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26760897 |
aatatgacctcttgaactaaatgattaattaaccatgcacacacaattattagtgtaagttgcaatattgaatgcttaattatacaattgtaacataatt |
26760798 |
T |
 |
| Q |
113 |
tgctagttaacaagattagggtagcatagatctgaaatattatttctttcatatattttctcaagttttggctaccaaagtcaacacttt-----tacta |
207 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26760797 |
tgttagttaacaagattagggtagcatagatctgaaatattatttctttcatatattttctcaagttttggctaccaaagtcaacactttaattttacta |
26760698 |
T |
 |
| Q |
208 |
ccatgtcaagtccgaaacttccttctcattttccatgtggactctttcctttgaattttctacatctgtacccatcaatgaaggatggataggttgatga |
307 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26760697 |
ccatgtcaagtccgaaacttccttctcatcttccatgtggacactttcctttaaattttctacatctgtacccatcaatgaaggatggataggttgatga |
26760598 |
T |
 |
| Q |
308 |
agactattaatacttatctaaaccaatgtgtgccttaaaaattaatgtcaatgccttaaaaatcaaactgacattttcaagtgagaccttagaaatgaat |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26760597 |
agactattaatacttatctaaaccaatgtgtgccttaaaaattaatgtcaatgccttaaaaatcaaactgacattttcaagtgagaccttagaaatgaat |
26760498 |
T |
 |
| Q |
408 |
tgacagctgtgatattttgtttagacttcaaaagtcaaaagtggttctgatatgtattatgtg |
470 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26760497 |
tgacagctgtgatattttgtttagacttcaaaagtcaaaagtggttctgatatatattatgtg |
26760435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 173 - 470
Target Start/End: Original strand, 27334389 - 27334695
Alignment:
| Q |
173 |
tcaagttttggctaccaaagtcaacacttttactacca-tgtcaagtccgaaacttccttctcattttccatgtggac---tct-------ttcctttga |
261 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||| | ||||||||| ||||||||||||| || |||||||||||| | | ||||||||| |
|
|
| T |
27334389 |
tcaagtttcagctaccaaagtctacacttttactactaatgtcaagtctgaaacttccttcttatcttccatgtggaccaatgtgggacacttcctttga |
27334488 |
T |
 |
| Q |
262 |
attttctacatctgtacccatcaatgaaggatggataggttgatgaagactattaatacttatctaaaccaatgtgtgccttaaaaattaatgtcaatgc |
361 |
Q |
| |
|
||| || | ||||| |||||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||| ||||| |||||||||| |
|
|
| T |
27334489 |
attagtaacgt--gtaccggtcaatgaaggatggataggtggatgaagactagtaatacttatgtaaaccaatgcgtgcctttaaaatcaatgtcaatga |
27334586 |
T |
 |
| Q |
362 |
cttaaaaatcaaactgacattttcaagtgagaccttagaaatgaattgacagctgtgatattttgtttagacttcaaaagtcaaaagtggttctgatatg |
461 |
Q |
| |
|
|||||||||||||||||||||||||| || | || || |||| ||| | | |||||||||||||||||||| |||||||| |||||| |||||||||| |
|
|
| T |
27334587 |
cttaaaaatcaaactgacattttcaaatgggtccctaaaaattaatcaagaactgtgatattttgtttagacctcaaaagttaaaagtcgttctgatatt |
27334686 |
T |
 |
| Q |
462 |
tattatgtg |
470 |
Q |
| |
|
||||||||| |
|
|
| T |
27334687 |
tattatgtg |
27334695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 173 - 470
Target Start/End: Original strand, 27395129 - 27395435
Alignment:
| Q |
173 |
tcaagttttggctaccaaagtcaacacttttactacca-tgtcaagtccgaaacttccttctcattttccatgtggac---tct-------ttcctttga |
261 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||| | ||||||||| ||||||||||||| || |||||||||||| | | ||||||||| |
|
|
| T |
27395129 |
tcaagtttcagctaccaaagtctacacttttactactaatgtcaagtctgaaacttccttcttatcttccatgtggaccaatgtgggacacttcctttga |
27395228 |
T |
 |
| Q |
262 |
attttctacatctgtacccatcaatgaaggatggataggttgatgaagactattaatacttatctaaaccaatgtgtgccttaaaaattaatgtcaatgc |
361 |
Q |
| |
|
||| || | ||||| |||||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||| ||||| |||||||||| |
|
|
| T |
27395229 |
attagtaacgt--gtaccggtcaatgaaggatggataggtggatgaagactagtaatacttatgtaaaccaatgcgtgcctttaaaatcaatgtcaatga |
27395326 |
T |
 |
| Q |
362 |
cttaaaaatcaaactgacattttcaagtgagaccttagaaatgaattgacagctgtgatattttgtttagacttcaaaagtcaaaagtggttctgatatg |
461 |
Q |
| |
|
|||||||||||||||||||||||||| || | || || |||| ||| | | |||||||||||||||||||| |||||||| |||||| |||||||||| |
|
|
| T |
27395327 |
cttaaaaatcaaactgacattttcaaatgggtccctaaaaattaatcaagaactgtgatattttgtttagacctcaaaagttaaaagtcgttctgatatt |
27395426 |
T |
 |
| Q |
462 |
tattatgtg |
470 |
Q |
| |
|
||||||||| |
|
|
| T |
27395427 |
tattatgtg |
27395435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 274 - 449
Target Start/End: Original strand, 27605583 - 27605758
Alignment:
| Q |
274 |
tgtacccatcaatgaaggatggataggttgatgaagactattaatacttatctaaaccaatgtgtgccttaaaaattaatgtcaatgccttaaaaatcaa |
373 |
Q |
| |
|
|||| |||| |||||||||||||||||| ||||||||||| |||||||| | |||| ||||||||||||||||| | ||||| |||||||||||| |||| |
|
|
| T |
27605583 |
tgtaaccatgaatgaaggatggataggtggatgaagactagtaatacttctgtaaatcaatgtgtgccttaaaagtcaatgttaatgccttaaaagtcaa |
27605682 |
T |
 |
| Q |
374 |
actgacattttcaagtgagaccttagaaatgaattgacagctgtgatattttgtttagacttcaaaagtcaaaagt |
449 |
Q |
| |
|
||||| ||||||||||| || || ||||||||||| |||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
27605683 |
actgaaattttcaagtgggatgctaaaaatgaattgagagctgtgatattttgtttagaccttaaaagtcaaaagt |
27605758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 27339638 - 27339767
Alignment:
| Q |
121 |
aacaagattagggtagcatagatctgaaatattatttctttcatatattttctcaagttttggctaccaaagtcaacacttttactac--catgtcaagt |
218 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |
|
|
| T |
27339638 |
aacaagattagggtaacatagatatgaaatattctttccttcatttattttctcaagttttggctacc-aagtcaacacttttactaccgcatgttgagt |
27339736 |
T |
 |
| Q |
219 |
ccgaaacttccttctcattttccatgtggac |
249 |
Q |
| |
|
| ||||||| |||||||| |||||||||||| |
|
|
| T |
27339737 |
ctgaaactttcttctcatcttccatgtggac |
27339767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 27400378 - 27400507
Alignment:
| Q |
121 |
aacaagattagggtagcatagatctgaaatattatttctttcatatattttctcaagttttggctaccaaagtcaacacttttactac--catgtcaagt |
218 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |
|
|
| T |
27400378 |
aacaagattagggtaacatagatatgaaatattctttccttcatttattttctcaagttttggctacc-aagtcaacacttttactaccgcatgttgagt |
27400476 |
T |
 |
| Q |
219 |
ccgaaacttccttctcattttccatgtggac |
249 |
Q |
| |
|
| ||||||| |||||||| |||||||||||| |
|
|
| T |
27400477 |
ctgaaactttcttctcatcttccatgtggac |
27400507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 27339283 - 27339364
Alignment:
| Q |
13 |
aatatgacctcttgaactaaatgattaattaatcatgcacacacaattattagtgtaagttgcaatattgaatgcttaatta |
94 |
Q |
| |
|
|||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||| || ||||||||||||||| |
|
|
| T |
27339283 |
aatatgacctgtttaactaaatgattaattaaccatgcacacacaattattagtgtaggttgttatgttgaatgcttaatta |
27339364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 27400023 - 27400104
Alignment:
| Q |
13 |
aatatgacctcttgaactaaatgattaattaatcatgcacacacaattattagtgtaagttgcaatattgaatgcttaatta |
94 |
Q |
| |
|
|||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||| || ||||||||||||||| |
|
|
| T |
27400023 |
aatatgacctgtttaactaaatgattaattaaccatgcacacacaattattagtgtaggttgttatgttgaatgcttaatta |
27400104 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 383
Target Start/End: Complemental strand, 31282997 - 31282887
Alignment:
| Q |
274 |
tgtacccatcaatgaaggatggataggttgatgaagactattaatacttatctaaaccaatgtg--tgccttaaaaattaatgtcaatgccttaaaaatc |
371 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||| | ||| |||| | | |||||||||| | |||||||| ||||||||||||||||||||| |
|
|
| T |
31282997 |
tgtacccatcaatgaagg-tggataggtggatgaagacaagtaacacttttgtcaaccaatgtgaatcttttaaaaatcaatgtcaatgccttaaaaatc |
31282899 |
T |
 |
| Q |
372 |
aaactgacattt |
383 |
Q |
| |
|
||| |||||||| |
|
|
| T |
31282898 |
aaaatgacattt |
31282887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 26652671 - 26652612
Alignment:
| Q |
330 |
ccaatgtgtgccttaaaaattaatgtcaatgccttaaaaatcaaactgacattttcaagtg |
390 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||| |
|
|
| T |
26652671 |
ccaatgtgtgccttaaaaatcaatgtcaatgcctt-aaaatcaaagtgacatttccaagtg |
26652612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 26758639 - 26758580
Alignment:
| Q |
330 |
ccaatgtgtgccttaaaaattaatgtcaatgccttaaaaatcaaactgacattttcaagtg |
390 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||| |
|
|
| T |
26758639 |
ccaatgtgtgccttaaaaatcaatgtcaatgcctt-aaaatcaaagtgacatttccaagtg |
26758580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 439
Target Start/End: Complemental strand, 25105520 - 25105429
Alignment:
| Q |
351 |
aatgtcaatgccttaaaaatcaaactgacattttcaagtgagaccttagaaatgaattgacagct---gtgatattttgtttagacttcaaa |
439 |
Q |
| |
|
||||| |||| ||||||||||||||||||||| |||||| |||| || ||||||||||| |||| |||||||||||||| ||| ||||| |
|
|
| T |
25105520 |
aatgtgaatgacttaaaaatcaaactgacattcccaagtgggaccctaaaaatgaattgagagcttaagtgatattttgtttggacctcaaa |
25105429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 27339949 - 27340006
Alignment:
| Q |
402 |
atgaattgacagctgtgatattttgtttagacttcaaaagtcaaaagtggttctgata |
459 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
27339949 |
atgaattgcgagctgtgatattttgtttagacctcaaaagtcaaaagtctttctgata |
27340006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 27400689 - 27400746
Alignment:
| Q |
402 |
atgaattgacagctgtgatattttgtttagacttcaaaagtcaaaagtggttctgata |
459 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
27400689 |
atgaattgcgagctgtgatattttgtttagacctcaaaagtcaaaagtctttctgata |
27400746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 443
Target Start/End: Original strand, 28242299 - 28242388
Alignment:
| Q |
357 |
aatgccttaaaaatcaaactgacattttcaagtgagaccttagaaatgaattgacagct---gtgatattttgtttagacttcaaaagtc |
443 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| || |||| || ||||||||||| |||| || ||||||||||||||| ||||||||| |
|
|
| T |
28242299 |
aatgccttaaaagtcaaattgacattttcagatgggaccctaaaaatgaattgaaagcttaagtaatattttgtttagacctcaaaagtc |
28242388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 408
Target Start/End: Original strand, 27611648 - 27611705
Alignment:
| Q |
351 |
aatgtcaatgccttaaaaatcaaactgacattttcaagtgagaccttagaaatgaatt |
408 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||| ||| |||| || ||||||||| |
|
|
| T |
27611648 |
aatgtgaatgccttaaaaatcaaacttacattttcaggtgggaccctaaaaatgaatt |
27611705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 27593746 - 27593802
Alignment:
| Q |
13 |
aatatgacctcttgaactaaatgattaattaatcatgcacacacaattattagtgta |
69 |
Q |
| |
|
||||| ||| ||||||| ||||| |||||||| ||||||||||||||||||| |||| |
|
|
| T |
27593746 |
aatattaccacttgaaccaaatggttaattaaccatgcacacacaattattattgta |
27593802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 27678324 - 27678268
Alignment:
| Q |
13 |
aatatgacctcttgaactaaatgattaattaatcatgcacacacaattattagtgta |
69 |
Q |
| |
|
||||| ||| ||||||| ||||| |||||||| ||||||||||||||||||| |||| |
|
|
| T |
27678324 |
aatattaccacttgaaccaaatggttaattaaccatgcacacacaattattattgta |
27678268 |
T |
 |
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Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 28164750 - 28164872
Alignment:
| Q |
121 |
aacaagattagggtagcatagatctgaaatattatttctttcatatattttctcaagttttggctaccaaagtcaacacttttactaccatgtcaagtcc |
220 |
Q |
| |
|
||||||| |||| |||||||||| || |||||||| | || ||| |||||||| |||||||||||||| ||||| ||||||||||||| |||| | |
|
|
| T |
28164750 |
aacaagagtaggttagcatagatatgcaatattatctgttccatttattttctgaagttttggctacc-aagtctacacttttactac-----caagact |
28164843 |
T |
 |
| Q |
221 |
gaaacttccttctcattttccatgtggac |
249 |
Q |
| |
|
|||||||||||||||| |||| ||||||| |
|
|
| T |
28164844 |
gaaacttccttctcatcttccgtgtggac |
28164872 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 249
Target Start/End: Original strand, 28128885 - 28129012
Alignment:
| Q |
116 |
tagttaacaagattagggtagcatagatctgaaatattatttctttcatatattttctcaagttttggctaccaaagtcaacacttttactaccatgtca |
215 |
Q |
| |
|
||||||||| || |||| |||||| ||| || |||||| | |||| ||| |||||||| |||||||||||||| ||||| ||||||||||||| || |
|
|
| T |
28128885 |
tagttaacatgagtaggctagcatggatatgcaatattctctcttccatttattttctgaagttttggctacc-aagtctacacttttactac-----ca |
28128978 |
T |
 |
| Q |
216 |
agtccgaaacttccttctcattttccatgtggac |
249 |
Q |
| |
|
|| | |||||||||||||||| |||| ||||||| |
|
|
| T |
28128979 |
agactgaaacttccttctcatcttccgtgtggac |
28129012 |
T |
 |
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Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 443
Target Start/End: Original strand, 42461 - 42550
Alignment:
| Q |
357 |
aatgccttaaaaatcaaactgacattttcaagtgagaccttagaaatgaattgacagct---gtgatattttgtttagacttcaaaagtc |
443 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| || |||| || ||||||||||| |||| || ||||||||||||||| ||||||||| |
|
|
| T |
42461 |
aatgccttaaaagtcaaattgacattttcagatgggaccctaaaaatgaattgaaagcttaagtaatattttgtttagacctcaaaagtc |
42550 |
T |
 |
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