View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16702_high_55 (Length: 282)
Name: NF16702_high_55
Description: NF16702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16702_high_55 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 47493834 - 47494067
Alignment:
| Q |
19 |
agttcttcgtctgtcaccttttctccgatggtactcaatactgacctcaactgggctcacacgtaatatcaattatatagttcaatattacggtacgaca |
118 |
Q |
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| T |
47493834 |
agttcttcgtctgtcaccttttctccgatggtactcaatactgacctcaactgggctcacacgtaatatcaattatatagttca---ttacggtacaaca |
47493930 |
T |
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| Q |
119 |
aaacaaattatatatgttgaattaattatacctcactgggtgatatgtaaccatctttatctttgtcgaacaccctgaaagcttccttaaattcctcttc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47493931 |
aaacaaattatatatgttgaattaattatacctcactgggtgatatgtaaccatctttatctttgtcgaacaccctgaaagcttccttaaattcctcttc |
47494030 |
T |
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| Q |
219 |
tgcttcactttcctttttcgtacataaaaattcacaa |
255 |
Q |
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| T |
47494031 |
cgcttcactttcctttttcgtacatacaaattcacaa |
47494067 |
T |
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