View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16702_high_57 (Length: 280)

Name: NF16702_high_57
Description: NF16702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16702_high_57
NF16702_high_57
[»] chr4 (46 HSPs)
chr4 (1-280)||(2003971-2004250)
chr4 (108-280)||(41262234-41262406)
chr4 (108-280)||(52204860-52205032)
chr4 (105-280)||(29227129-29227304)
chr4 (105-280)||(51255756-51255931)
chr4 (105-280)||(1816562-1816737)
chr4 (105-248)||(18315979-18316122)
chr4 (105-280)||(39158115-39158290)
chr4 (104-248)||(5386414-5386558)
chr4 (104-200)||(10146974-10147070)
chr4 (106-280)||(55266035-55266209)
chr4 (149-278)||(36130283-36130412)
chr4 (112-280)||(2738161-2738329)
chr4 (149-280)||(5932694-5932825)
chr4 (105-280)||(38519803-38519978)
chr4 (105-280)||(51577624-51577799)
chr4 (110-280)||(54000708-54000878)
chr4 (104-201)||(22813607-22813704)
chr4 (105-280)||(14443208-14443383)
chr4 (175-280)||(37297059-37297163)
chr4 (106-280)||(50506403-50506572)
chr4 (175-280)||(39440494-39440598)
chr4 (162-280)||(37997266-37997381)
chr4 (162-280)||(23369276-23369393)
chr4 (175-280)||(36177916-36178020)
chr4 (105-197)||(19651805-19651897)
chr4 (161-280)||(149427-149546)
chr4 (162-280)||(10250459-10250576)
chr4 (165-280)||(40348804-40348918)
chr4 (165-280)||(42853586-42853701)
chr4 (234-280)||(20118791-20118837)
chr4 (162-272)||(31574883-31574993)
chr4 (162-280)||(43174994-43175111)
chr4 (162-280)||(46634110-46634227)
chr4 (235-279)||(3316361-3316405)
chr4 (188-280)||(22819659-22819750)
chr4 (185-280)||(24045254-24045347)
chr4 (106-246)||(26600086-26600226)
chr4 (185-280)||(5622468-5622562)
chr4 (185-280)||(7632428-7632523)
chr4 (107-182)||(21014105-21014180)
chr4 (175-280)||(31641522-31641624)
chr4 (235-280)||(9118880-9118925)
chr4 (235-280)||(37060327-37060372)
chr4 (223-280)||(56474768-56474825)
chr4 (203-280)||(56557743-56557820)
[»] chr5 (33 HSPs)
chr5 (108-280)||(42446180-42446352)
chr5 (109-280)||(13089672-13089843)
chr5 (104-280)||(32872783-32872959)
chr5 (105-280)||(17097689-17097863)
chr5 (106-280)||(611874-612048)
chr5 (107-248)||(21210860-21211001)
chr5 (106-280)||(31748346-31748520)
chr5 (106-227)||(16971987-16972108)
chr5 (107-210)||(39195824-39195927)
chr5 (175-280)||(19521960-19522064)
chr5 (162-280)||(33037530-33037647)
chr5 (110-215)||(12739847-12739951)
chr5 (110-215)||(12802670-12802774)
chr5 (175-280)||(22649618-22649722)
chr5 (109-280)||(19981876-19982047)
chr5 (162-280)||(7287133-7287251)
chr5 (162-280)||(35646392-35646510)
chr5 (185-280)||(18660769-18660863)
chr5 (185-280)||(26791211-26791305)
chr5 (162-280)||(5168193-5168310)
chr5 (162-280)||(28306076-28306193)
chr5 (165-219)||(32478442-32478496)
chr5 (175-277)||(36738961-36739062)
chr5 (186-280)||(39195727-39195821)
chr5 (235-280)||(43441748-43441793)
chr5 (188-280)||(8675403-8675494)
chr5 (104-280)||(11954441-11954617)
chr5 (233-280)||(1293100-1293147)
chr5 (185-280)||(22098265-22098360)
chr5 (187-280)||(1764234-1764326)
chr5 (110-215)||(36562944-36563049)
chr5 (236-280)||(23126360-23126404)
chr5 (161-280)||(35075520-35075637)
[»] chr7 (37 HSPs)
chr7 (108-280)||(33057389-33057561)
chr7 (106-280)||(32777594-32777768)
chr7 (109-280)||(43081780-43081951)
chr7 (104-280)||(12007071-12007247)
chr7 (106-280)||(13152603-13152777)
chr7 (105-280)||(33845052-33845227)
chr7 (105-280)||(34978306-34978481)
chr7 (106-280)||(37352120-37352294)
chr7 (161-280)||(47448836-47448955)
chr7 (105-280)||(15325526-15325698)
chr7 (104-228)||(45419946-45420070)
chr7 (109-280)||(21103022-21103193)
chr7 (109-200)||(28249460-28249551)
chr7 (106-280)||(46880912-46881086)
chr7 (106-210)||(29723812-29723916)
chr7 (106-210)||(2008719-2008823)
chr7 (204-280)||(2008843-2008919)
chr7 (165-280)||(48062066-48062181)
chr7 (106-248)||(43807700-43807842)
chr7 (185-270)||(40854621-40854706)
chr7 (104-243)||(27570390-27570529)
chr7 (185-280)||(31445327-31445422)
chr7 (105-215)||(26749079-26749189)
chr7 (162-280)||(38861106-38861223)
chr7 (175-280)||(30941396-30941504)
chr7 (169-267)||(3148749-3148847)
chr7 (162-280)||(9363397-9363515)
chr7 (188-274)||(41430121-41430207)
chr7 (178-280)||(44189270-44189371)
chr7 (162-280)||(44895516-44895633)
chr7 (106-171)||(8904348-8904413)
chr7 (223-280)||(16980307-16980364)
chr7 (239-280)||(22623398-22623439)
chr7 (235-280)||(25192901-25192945)
chr7 (185-266)||(46578102-46578183)
chr7 (252-280)||(17002346-17002374)
chr7 (190-274)||(42584818-42584902)
[»] chr2 (33 HSPs)
chr2 (108-280)||(18510685-18510857)
chr2 (115-280)||(39234076-39234241)
chr2 (105-280)||(37316701-37316876)
chr2 (106-280)||(37731087-37731261)
chr2 (105-280)||(11965803-11965978)
chr2 (104-280)||(26480975-26481151)
chr2 (109-280)||(30831766-30831935)
chr2 (105-280)||(36587357-36587529)
chr2 (104-228)||(31578496-31578620)
chr2 (106-258)||(32944391-32944543)
chr2 (105-210)||(14871951-14872056)
chr2 (119-280)||(43057074-43057235)
chr2 (106-201)||(1079010-1079105)
chr2 (161-280)||(19916665-19916784)
chr2 (109-228)||(8847549-8847669)
chr2 (105-210)||(14877069-14877174)
chr2 (106-201)||(44239125-44239220)
chr2 (177-280)||(9990701-9990803)
chr2 (185-280)||(18254176-18254270)
chr2 (183-258)||(32477363-32477438)
chr2 (162-280)||(2076579-2076696)
chr2 (162-280)||(9207600-9207717)
chr2 (175-280)||(6511261-6511365)
chr2 (235-280)||(35589403-35589448)
chr2 (187-280)||(41042264-41042356)
chr2 (109-228)||(36417289-36417408)
chr2 (150-280)||(37003621-37003750)
chr2 (235-280)||(5031933-5031978)
chr2 (204-277)||(14871860-14871933)
chr2 (203-280)||(38821376-38821453)
chr2 (185-266)||(41195607-41195688)
chr2 (175-276)||(42421855-42421955)
chr2 (236-280)||(28481791-28481835)
[»] chr8 (40 HSPs)
chr8 (115-280)||(4672001-4672166)
chr8 (104-280)||(33451450-33451624)
chr8 (104-280)||(1068616-1068792)
chr8 (105-280)||(25987673-25987848)
chr8 (106-248)||(44090928-44091070)
chr8 (106-280)||(34435624-34435798)
chr8 (104-280)||(44061727-44061903)
chr8 (105-280)||(15716862-15717037)
chr8 (105-280)||(26026906-26027081)
chr8 (105-280)||(28772012-28772185)
chr8 (105-280)||(33107753-33107928)
chr8 (135-280)||(5600903-5601048)
chr8 (135-280)||(5639572-5639717)
chr8 (106-223)||(37172127-37172244)
chr8 (107-280)||(2730849-2731022)
chr8 (114-266)||(44825466-44825618)
chr8 (105-228)||(12241134-12241257)
chr8 (162-280)||(31249468-31249585)
chr8 (115-280)||(45405880-45406045)
chr8 (106-225)||(9630188-9630307)
chr8 (162-280)||(22719450-22719567)
chr8 (162-280)||(27325768-27325885)
chr8 (162-280)||(32501140-32501257)
chr8 (107-228)||(36874001-36874120)
chr8 (235-280)||(34018818-34018863)
chr8 (185-280)||(35067170-35067265)
chr8 (185-266)||(10731569-10731650)
chr8 (203-280)||(33605062-33605139)
chr8 (204-280)||(21526266-21526342)
chr8 (185-280)||(25830212-25830307)
chr8 (162-280)||(33100414-33100530)
chr8 (181-280)||(43285925-43286024)
chr8 (162-280)||(6440091-6440209)
chr8 (234-280)||(42733580-42733626)
chr8 (162-280)||(43397791-43397908)
chr8 (223-280)||(67165-67222)
chr8 (188-280)||(16872126-16872217)
chr8 (111-191)||(34476255-34476335)
chr8 (184-280)||(34718125-34718220)
chr8 (185-277)||(36816583-36816674)
[»] chr3 (54 HSPs)
chr3 (106-280)||(34307428-34307602)
chr3 (105-280)||(4494123-4494298)
chr3 (105-280)||(41443077-41443252)
chr3 (105-227)||(31104727-31104849)
chr3 (105-280)||(32362943-32363116)
chr3 (114-280)||(9692735-9692901)
chr3 (106-280)||(34456800-34456974)
chr3 (108-210)||(25188313-25188416)
chr3 (204-280)||(25188450-25188526)
chr3 (105-194)||(39099413-39099502)
chr3 (104-280)||(27168567-27168743)
chr3 (109-228)||(39713927-39714046)
chr3 (110-280)||(38671628-38671797)
chr3 (105-254)||(33472305-33472454)
chr3 (146-277)||(34064033-34064163)
chr3 (162-280)||(5114088-5114205)
chr3 (114-280)||(9862543-9862709)
chr3 (162-280)||(27541446-27541563)
chr3 (104-218)||(32145871-32145985)
chr3 (162-280)||(38926638-38926755)
chr3 (99-280)||(29525874-29526054)
chr3 (162-280)||(20547934-20548051)
chr3 (162-280)||(41505501-41505618)
chr3 (162-280)||(46623917-46624034)
chr3 (162-280)||(52254082-52254199)
chr3 (187-280)||(7668156-7668248)
chr3 (175-280)||(50314634-50314739)
chr3 (184-280)||(48353006-48353102)
chr3 (161-280)||(10811145-10811264)
chr3 (185-280)||(26014822-26014916)
chr3 (178-280)||(288735-288837)
chr3 (162-280)||(5244239-5244356)
chr3 (176-266)||(6178383-6178473)
chr3 (162-280)||(45711383-45711500)
chr3 (189-274)||(26452693-26452778)
chr3 (235-280)||(31931035-31931080)
chr3 (162-215)||(41309191-41309244)
chr3 (161-257)||(8502833-8502929)
chr3 (162-280)||(52939663-52939778)
chr3 (161-199)||(20221570-20221608)
chr3 (235-280)||(15927611-15927656)
chr3 (235-280)||(24482979-24483024)
chr3 (175-280)||(36670971-36671075)
chr3 (235-280)||(37788356-37788400)
chr3 (175-276)||(42358595-42358695)
chr3 (235-280)||(44677500-44677545)
chr3 (235-280)||(50206986-50207031)
chr3 (187-280)||(50559180-50559273)
chr3 (235-280)||(52963332-52963377)
chr3 (187-280)||(54099325-54099418)
chr3 (185-280)||(3648589-3648682)
chr3 (162-280)||(42357028-42357141)
chr3 (204-280)||(47472339-47472414)
chr3 (204-280)||(48405420-48405496)
[»] scaffold0618 (1 HSPs)
scaffold0618 (106-248)||(8840-8982)
[»] chr6 (24 HSPs)
chr6 (105-280)||(5739650-5739825)
chr6 (106-280)||(8645319-8645492)
chr6 (104-280)||(8505658-8505835)
chr6 (105-280)||(33712330-33712505)
chr6 (109-280)||(18064980-18065151)
chr6 (97-280)||(14910187-14910368)
chr6 (105-280)||(11635421-11635596)
chr6 (105-210)||(1286993-1287098)
chr6 (185-280)||(25811805-25811899)
chr6 (175-280)||(8098554-8098656)
chr6 (164-280)||(22079509-22079624)
chr6 (185-280)||(17551345-17551440)
chr6 (106-216)||(17182172-17182282)
chr6 (235-280)||(2777332-2777377)
chr6 (162-280)||(5080511-5080628)
chr6 (162-280)||(26595359-26595476)
chr6 (223-280)||(1376374-1376431)
chr6 (223-280)||(1384122-1384179)
chr6 (133-201)||(10375743-10375812)
chr6 (235-280)||(11547545-11547590)
chr6 (162-215)||(20998089-20998142)
chr6 (204-280)||(3552139-3552215)
chr6 (161-201)||(3772444-3772484)
chr6 (235-279)||(4820410-4820454)
[»] scaffold0201 (1 HSPs)
scaffold0201 (106-280)||(8482-8656)
[»] chr1 (39 HSPs)
chr1 (106-280)||(48858833-48859007)
chr1 (105-278)||(40439726-40439899)
chr1 (110-280)||(7918953-7919123)
chr1 (105-280)||(4213082-4213257)
chr1 (105-280)||(47642493-47642668)
chr1 (106-280)||(5771631-5771809)
chr1 (105-280)||(48983554-48983729)
chr1 (113-228)||(4857972-4858087)
chr1 (162-280)||(649778-649896)
chr1 (104-280)||(27742627-27742795)
chr1 (161-280)||(17082685-17082804)
chr1 (175-280)||(37685341-37685443)
chr1 (175-280)||(37700075-37700177)
chr1 (106-228)||(38878788-38878910)
chr1 (175-280)||(35369710-35369814)
chr1 (175-280)||(33100818-33100922)
chr1 (162-280)||(8350142-8350257)
chr1 (105-215)||(42468667-42468777)
chr1 (176-280)||(9566918-9567022)
chr1 (185-280)||(9987961-9988056)
chr1 (116-246)||(23332313-23332443)
chr1 (162-280)||(35529323-35529441)
chr1 (185-280)||(19947711-19947802)
chr1 (185-280)||(29359649-29359741)
chr1 (188-280)||(36577382-36577473)
chr1 (185-277)||(44519118-44519209)
chr1 (185-280)||(15083017-15083111)
chr1 (193-280)||(21433375-21433462)
chr1 (185-280)||(35136854-35136948)
chr1 (163-280)||(2571645-2571761)
chr1 (162-280)||(27465001-27465118)
chr1 (162-280)||(31088191-31088308)
chr1 (161-215)||(41070897-41070951)
chr1 (235-280)||(26837462-26837507)
chr1 (235-280)||(29586003-29586048)
chr1 (175-280)||(37274990-37275094)
chr1 (162-215)||(45333785-45333838)
chr1 (203-280)||(49020388-49020465)
chr1 (162-274)||(52437510-52437622)
[»] scaffold0432 (1 HSPs)
scaffold0432 (105-280)||(6406-6581)
[»] scaffold0128 (1 HSPs)
scaffold0128 (104-278)||(10948-11120)
[»] scaffold0034 (1 HSPs)
scaffold0034 (108-277)||(101790-101964)
[»] scaffold0276 (1 HSPs)
scaffold0276 (106-261)||(1673-1828)
[»] scaffold0184 (2 HSPs)
scaffold0184 (106-225)||(13444-13563)
scaffold0184 (162-280)||(16732-16849)
[»] scaffold0078 (2 HSPs)
scaffold0078 (106-225)||(59281-59400)
scaffold0078 (162-280)||(55995-56112)
[»] scaffold0110 (1 HSPs)
scaffold0110 (187-280)||(28295-28388)
[»] scaffold0056 (1 HSPs)
scaffold0056 (162-280)||(76563-76680)
[»] scaffold0027 (1 HSPs)
scaffold0027 (187-268)||(121657-121738)
[»] scaffold0002 (1 HSPs)
scaffold0002 (175-280)||(469594-469699)


Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 2003971 - 2004250
Alignment:
Q  1 caatcaactttgttatttgcagtaccaaagtgagaaaagtaattttctttatatgtaactacggaagatgttttagtttggagttgaagcaaatgttata 100  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2003971 caatcaactttgttatttgcagtatcaaagtgaaagaagtaattttctttatatgtaactacggaagatgttttagtttggagttgaagcaaatgttata 2004070  T
Q  101 ttctagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaa 200  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2004071 ctctagagcaatgttatttgaacaaccttttcttgtgataacctattagacaatcaaataatataaagaaatttaggtagtgatacaaaaatcaaagcaa 2004170  T
Q  201 tgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||| ||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  2004171 tgtagagagaaagtagaagggcaatgtgagtaagagatagaaagttgttgcaaaagttgttaaaaaatggttgttcaaat 2004250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 108 - 280
Target Start/End: Original strand, 41262234 - 41262406
Alignment:
Q  108 gcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagag 207  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| || ||  |||||||||||||||||  |||     
T  41262234 gcaatgttatttgaacaaccttttcttgtgacaacctattagacaaccaaataatacaaagaaatttagataatggcacaaaaatcaaagcaatagagaa 41262333  T
Q  208 agaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||| |||||| ||||    
T  41262334 agaaagtagaaggacaatgtgagtaagagagagaaaattgttgcaaaaattgtcaaaaaatagttgtttaaat 41262406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 108 - 280
Target Start/End: Complemental strand, 52205032 - 52204860
Alignment:
Q  108 gcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagag 207  Q
    ||||| ||||||||||||||||||||| ||||||| | || ||||| ||||| ||| ||||||||||| ||||||| |||||||||||||||||  ||||    
T  52205032 gcaatattatttgaacaatcttttcttatgataacttgttggacaaccaaattataaaaagaaatttaagtagtgacacaaaaatcaaagcaatagagag 52204933  T
Q  208 agaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||  |||||||| |||  | |||||||||| |  ||||| ||||||||||||  ||||||||||    
T  52204932 agaaagtagaaaaacaatgtgagtatgaaagagaaaattataacaaaaattgttaaaaaataattgttcaaat 52204860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 29227129 - 29227304
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| |||||  ||||| ||  | || ||||| || || ||||||||||||||||||||||| ||||| |||||||||||  |    
T  29227129 agagcaatgttatttgaacaacctttttatgtgacaatttgttggacaaccatattatacaaagaaatttaggtagtgacacaaatatcaaagcaataga 29227228  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| |||||||| |||  ||||||||| || |  ||||| || | ||||| |||||||||||||    
T  29227229 gagagaaagtagaagaacaatgtgtgtatgagagagaaagttatcacaaaaattatcaaaaagtggttgttcaaat 29227304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 51255931 - 51255756
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||||||||||||| |||| | ||| |||||| ||| | || ||||| |||||  ||||||||||||||| |||||  |||||||||||||||||  |    
T  51255931 agagcaatgttatttgtacaaccatttattgtgacaacttgttggacaaccaaattttacaaagaaatttagatagtggcacaaaaatcaaagcaataga 51255832  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||  |  ||||| |||  ||||||||| ||||  |||||||||| |||||||||||||||||||    
T  51255831 gagagaaagtagaataatcatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaat 51255756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 1816562 - 1816737
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||| ||||||||| ||||||||||||| || ||||||||| |||| ||| ||| ||| ||||||||||| |||||||||||||||||  |    
T  1816562 agagcaatgttatatgaacaatcatttcttgtgataatcttttagacaattaaattatataaaaaaaattaggtagtgacacaaaaatcaaagcaataga 1816661  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||| |||||| || || ||| || |||  ||| |||||||| |  |||||||| || |||  |||||||||||||    
T  1816662 gagataaagtaaaatgataatatgagtatgagaaagaaaattatcacaaaagttattcaaatgtggttgttcaaat 1816737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 248
Target Start/End: Complemental strand, 18316122 - 18315979
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| | |||||| ||| ||| | || ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||  |    
T  18316122 agagcaatgttatttgaacaaccatttcttatgacaacttgttggacaaccaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaataga 18316023  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgt 248  Q
     |||||||||| || ||  ||||| ||| |||||||||| ||||    
T  18316022 aagagaaagtaaaatgatgatgtgagtataagagagaaagttgt 18315979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 39158290 - 39158115
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| | ||| |||||| ||| |||| ||||| ||||| |||||||||||||||||||| |  ||||||| |||| ||||  |    
T  39158290 agagcaatgttatttgaacaaccatttattgtgacaacttattggacaaccaaattatacaaagaaatttaggtagcggcacaaaaaccaaaacaataga 39158191  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     |||||||||||||| | |||||| |||  ||||||||| ||||  ||||| || | |||||||| ||||||||||    
T  39158190 aagagaaagtagaagaataatgtgagtatgagagagaaagttgtcacaaaaattatcaaaaaatgattgttcaaat 39158115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 248
Target Start/End: Complemental strand, 5386558 - 5386414
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||| ||||||||||| | |||||||||| ||| | ||||||||  |||| |||||||||||||||| |||| | |||||||||||||||||      
T  5386558 tagagcaatgatatttgaacaaccatttcttgtgacaactttttagacaactaaattatacaaagaaatttagatagtaacacaaaaatcaaagcaatag 5386459  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgt 248  Q
    |||||||||||| ||| | |||||| |||  ||||||||| ||||    
T  5386458 agagagaaagtaaaagaataatgtgagtatgagagagaaagttgt 5386414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 10146974 - 10147070
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaa 200  Q
    ||||| |||||||||| ||||||| |||||||||||||| | || ||||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  10146974 tagagtaatgttatttaaacaatcatttcttgtgataacttgttggacaatcaaattatacaaagaaatttaggtagtgacacaaaaataaaagcaa 10147070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 55266209 - 55266035
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||||| ||| |||||||||| | ||| ||||  |||| ||| |||   |||||| |||||| ||||||||||||| |||  ||    
T  55266209 gagcaatgttatttgaacaatcctttattgtgataacttcttatacaactaaattatataaatggatttagatagtgacacaaaaatcaaagtaataaag 55266110  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||| ||||||||||||  ||  |||||||||||| |   ||||||||  |||||||||||||| ||||    
T  55266109 agagaaagtaaaaggacaatgtgaatatgagagagaaaattataataaaagttgacaaaaaatggttgtttaaat 55266035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 278
Target Start/End: Original strand, 36130283 - 36130412
Alignment:
Q  149 gacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgt 248  Q
    |||||||| || ||||||||||||||||||| ||| ||||||||||| |||||  ||||| |||||||||| |||||||| |||  ||||| ||| ||||    
T  36130283 gacaatcacattatacaaagaaatttaggtaatgacacaaaaatcaaggcaatagagagaaaaagtagaagaacaatgtgtgtatgagagataaagttgt 36130382  T
Q  249 tgcaaaagttgttaaaaaatggttgttcaa 278  Q
      |||||||||| ||||| |||||||||||    
T  36130383 cacaaaagttgtcaaaaagtggttgttcaa 36130412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 112 - 280
Target Start/End: Original strand, 2738161 - 2738329
Alignment:
Q  112 tgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaa 211  Q
    |||||||| ||||||| |||||||||| ||||| || |||||| |||| |||||||||| ||||||| |||  |||| |||||||| |||  ||||||||    
T  2738161 tgttatttaaacaatcatttcttgtgacaaccttttggacaattaaattatacaaagaattttaggttgtggcacaacaatcaaagaaatagagagagaa 2738260  T
Q  212 agtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| || ||||||  ||  ||||||||| || |  ||||| |||| |||||||| ||||||||||    
T  2738261 agtagaaagataatgtgaatatgagagagaaagttatcacaaaaattgtcaaaaaatgattgttcaaat 2738329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 280
Target Start/End: Original strand, 5932694 - 5932825
Alignment:
Q  149 gacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgt 248  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||| ||||  | ||||| | || ||||| |||||| |||  ||||||||| ||||    
T  5932694 gacaattaaattatacaaagaaatttaggtagtgacacaaaaatcaaaacaatagatagagacactaaaaggataatgtgagtatgagagagaaagttgt 5932793  T
Q  249 tgcaaaagttgttaaaaaatggttgttcaaat 280  Q
      |||||||||| ||||| |||||||||||||    
T  5932794 cacaaaagttgtcaaaaagtggttgttcaaat 5932825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 38519978 - 38519803
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||||||||||||| | || | ||| |||||| ||| | || ||||| |||||  ||||||||||||||  |||||  |||||||||||||||||  |    
T  38519978 agagcaatgttatttgtataaccatttattgtgacaacttgttggacaaccaaattttacaaagaaatttaaatagtggcacaaaaatcaaagcaataga 38519879  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||  |  ||||| |||  ||||||||| ||||  ||||| |||| |||||||||||||||||||    
T  38519878 gagagaaagtagaataatcatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaaatggttgttcaaat 38519803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 51577799 - 51577624
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||| || |||||||| || | |||||||||| ||||| || |||||  |||| ||| ||||||||||||||||||  |||||||||||||||||  |    
T  51577799 agagcagtgatatttgaataaccatttcttgtgacaaccttttggacaactaaattatataaagaaatttaggtagtggcacaaaaatcaaagcaataga 51577700  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| || || ||| || |||  ||||||||| ||||  |||||||| | ||||| || ||||||||||    
T  51577699 gagagaaagtaaaatgataatatgagtatgagagagaaagttgtcacaaaagttatcaaaaagtgattgttcaaat 51577624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 280
Target Start/End: Complemental strand, 54000878 - 54000708
Alignment:
Q  110 aatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagag 209  Q
    ||||||||||||||||   ||| |||||| ||||| || |||||  |||| ||||||||||||||||||||||  ||| ||||  |||||||  ||||||    
T  54000878 aatgttatttgaacaactatttattgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacacaaatttaagcaatagagagag 54000779  T
Q  210 aaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| || || |||||| |||  ||||||||| |||||  |||| |||| ||||| |||||||||||||    
T  54000778 aaagtaaaatgataatgtgagtatgagagagaaagttgttataaaaattgtcaaaaagtggttgttcaaat 54000708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 22813607 - 22813704
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaat 201  Q
    |||||||||||||||| |||||  ||||||||||| ||| | || |||||| |||| ||| ||||||||||||||||||| |||||||||||||||||    
T  22813607 tagagcaatgttatttaaacaactttttcttgtgacaacttgttggacaattaaattatataaagaaatttaggtagtgacacaaaaatcaaagcaat 22813704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 14443383 - 14443208
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||| ||||||||||| | ||| |||||| ||||| || |||||  |||| |||||||| |||||||||||||    |||||| ||||||||  |    
T  14443383 agagcaatgatatttgaacaaccattttttgtgacaaccttttggacaactaaattatacaaaggaatttaggtagtggcgtaaaaattaaagcaataga 14443284  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| ||  | ||| |  |||  ||||||||||||||  |||||||||| |||||||| ||||||||||    
T  14443283 gagagaaagtaaaataataatataagtatgagagagaaaattgtcacaaaagttgtcaaaaaatgattgttcaaat 14443208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 37297163 - 37297059
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||||||||  ||||||||| ||||||||||||||    
T  37297163 aggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaagttg-taaaaaatggttgt 37297065  T
Q  275 tcaaat 280  Q
    ||||||    
T  37297064 tcaaat 37297059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 50506572 - 50506403
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    ||||||||||||||||||||   |||||||||| ||||| || |||||  |||| ||||||||||||||||||||||  || ||||||||||||||        
T  50506572 gagcaatgttatttgaacaactatttcttgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcac-aaaatcaaagcaat---- 50506478  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    || || ||||||| || ||||||  ||  |||||||||||| |  ||||| || | |||||||||||||||||||    
T  50506477 agggagagtagaatgataatgtgaatatgagagagaaaattatctcaaaaattatcaaaaaatggttgttcaaat 50506403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 39440598 - 39440494
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| |||||||||||||||||  |||||||||||| || || |||||| |||  | |||||||||| |  ||||||||| ||||||||||||||    
T  39440598 aggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaatgaaaatgtgagtatgaaagagaaaattatcacaaaagttg-taaaaaatggttgt 39440500  T
Q  275 tcaaat 280  Q
    ||||||    
T  39440499 tcaaat 39440494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 37997381 - 37997266
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||| ||| |||||||||||||||||  |||||||||||| || || |||||| ||  | |||||||| ||||  ||||||||| |    
T  37997381 tacaaagaaaatgaggtattgacacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagt--atgagagaaagttgtcacaaaagttg-t 37997285  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  37997284 aaaaaatggttgttcaaat 37997266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 23369276 - 23369393
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||||||||  ||||| |||||| || || |||||| |||| ||||||||| ||||  ||||||||||     
T  23369276 tacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagataaagtaaaaagataatgtgagtaagagagagaaagttgtcacaaaagttgt- 23369374  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  23369375 aaaaaatggttgttcaaat 23369393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 36178020 - 36177916
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    |||||||| |||||||| |||||||||  ||| |||||||| || || |||||| |||  |||||||||||||   ||||||||| ||||||||||||||    
T  36178020 aggtagtggtacaaaaaccaaagcaatagagaaagaaagtaaaaagataatgtgagtatgagagagaaaattgcgacaaaagttg-taaaaaatggttgt 36177922  T
Q  275 tcaaat 280  Q
    ||||||    
T  36177921 tcaaat 36177916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 19651805 - 19651897
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaag 197  Q
    |||| |||| ||||||||||| | ||| |||||| ||||| || |||||  |||| ||||||||||||||||||||||| | |||||||||||    
T  19651805 agagtaatgatatttgaacaaccattttttgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtgacataaaaatcaaag 19651897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 149427 - 149546
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgt 260  Q
    ||||||||||||||||||||||| |||||||  ||||||||  ||||||||||| |||  | |||||| |||  ||||||||| ||||  ||||| || |    
T  149427 atacaaagaaatttaggtagtgacacaaaaactaaagcaatagagagagaaagttgaaacataatgtgagtatgagagagaaagttgtcacaaaaattat 149526  T
Q  261 taaaaaatggttgttcaaat 280  Q
     ||||| || ||||||||||    
T  149527 caaaaagtgattgttcaaat 149546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 10250459 - 10250576
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | | ||||||  ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  ||||||||| |    
T  10250459 tacaaagaaaatgaagtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttg-t 10250557  T
Q  262 aaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||||    
T  10250558 aaaaaatagttgttcaaat 10250576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 280
Target Start/End: Complemental strand, 40348918 - 40348804
Alignment:
Q  165 aaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaa 264  Q
    ||||||| | || |||||| ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||||||||  ||||| ||  ||||    
T  40348918 aaagaaaatgagatagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaaatt-ataaa 40348820  T
Q  265 aaatggttgttcaaat 280  Q
    ||||| ||||||||||    
T  40348819 aaatgattgttcaaat 40348804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 280
Target Start/End: Complemental strand, 42853701 - 42853586
Alignment:
Q  165 aaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaa 264  Q
    ||||||| | ||||| ||| ||||||| |||||||||  |||||||||||  ||  | ||| || ||| |||||| ||||||||| |||||||||| |||    
T  42853701 aaagaaaatgaggtattgacacaaaaaccaaagcaatagagagagaaagtgaaaacataatatgagtataagagataaaattgttacaaaagttgtaaaa 42853602  T
Q  265 aaatggttgttcaaat 280  Q
    ||||  ||||||||||    
T  42853601 aaattattgttcaaat 42853586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 20118837 - 20118791
Alignment:
Q  234 aagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||| || ||||||||||||||| |||||||||||||||||    
T  20118837 aagagagaaagttattgcaaaagttgttataaaatggttgttcaaat 20118791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 272
Target Start/End: Original strand, 31574883 - 31574993
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | | ||| |||||||||||||||||||||  ||||||||| || ||  | |||||| |||  |||||||||||| |  ||||||||||     
T  31574883 tacaaagaaaatcatgtattgatacaaaaatcaaagcaatagagagagaaaataaaaatataatgtgagtatgagagagaaaattatcacaaaagttgtc 31574982  T
Q  262 aaaaaatggtt 272  Q
    | |||||||||    
T  31574983 agaaaatggtt 31574993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 43175111 - 43174994
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||| |||||| ||  |||||||||||| ||  | |||||| |||  ||||||||| || |  ||||||||| |    
T  43175111 tacaaaggaaatgaggtagtgacacaaaaaccaaagccatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagttatcacaaaagttg-t 43175013  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  43175012 aaaaaatggttgttcaaat 43174994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 46634227 - 46634110
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||||||||| |||  | |||||||||| || || |||||| |||  ||||| ||| ||||  ||||||||| |    
T  46634227 tacaaaggaaatgaggtagtgacacaaaaatcaaagtaatagaaagagaaagtaaaaagataatgtgagtatgagagataaagttgtcacaaaagttg-t 46634129  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||| ||||||||||    
T  46634128 aaaaaatgattgttcaaat 46634110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 3316405 - 3316361
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaa 279  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||    
T  3316405 agagagaaaattgttacaaaagttgtcaaaaaatggttattcaaa 3316361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 22819750 - 22819659
Alignment:
Q  188 aaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||  ||||| |||||| || |  |||||| |||  ||||||||| |||||||||||||||| | ||||||| |||||||||    
T  22819750 aaaatcaaagcaataaagagataaagtaaaaagt-aatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaat 22819659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 24045347 - 24045254
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||  |||||||||||| ||  | |||||| |||  ||||||||  |||| ||||||||||| ||||| ||||||| |||||    
T  24045347 acaaaaatcaaagcaat--agagagaaagtaaaaacataatgtgagtatgagagagaaggttgtcgcaaaagttgtaaaaaattggttgtgcaaat 24045254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 26600086 - 26600226
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    ||||||||||||||||||||  ||||  ||||| ||  | || ||||| || || ||||||| | | |||| |||||  |||| ||| ||||||||  ||    
T  26600086 gagcaatgttatttgaacaacatttttatgtgacaatttgttggacaaccacattatacaaaaagaattagatagtggcacaataataaaagcaatagag 26600185  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaatt 246  Q
    | |||||||||||| |||||||| |||  ||||||||||||    
T  26600186 aaagaaagtagaagaacaatgtgtgtatgagagagaaaatt 26600226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 5622562 - 5622468
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||  ||||| |||||| || || |||||| |||  | ||||||| ||||  |||||||||| |||||||||||||||||||    
T  5622562 acaaaaaccaaagcaatagagagaaaaagtaaaaagataatgtgagtatgaaagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaat 5622468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 7632428 - 7632523
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||  |||||||||||| ||  | |||||| |||  | |||||||||| |  |||||||||| ||||| || ||||||||||    
T  7632428 acaaaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgaaagagaaaattatcacaaaagttgtcaaaaattgattgttcaaat 7632523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 21014180 - 21014105
Alignment:
Q  107 agcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtg 182  Q
    ||||||||||||||||||| ||||| |||||| ||| | ||| |||| ||||| ||||||||  |||||| |||||    
T  21014180 agcaatgttatttgaacaaccttttattgtgacaacttcttatacaaccaaattatacaaagggatttagatagtg 21014105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 31641522 - 31641624
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| |||||||||||||||||| ||| |||||||| ||  | |||||| ||   ||||||||| ||||  |||||   |||||||||| |||||    
T  31641522 aggtagtgacacaaaaatcaaagcaatggagacagaaagtaaaaatataatgtgagtgtgagagagaaagttgtcacaaaa---gttaaaaaatagttgt 31641618  T
Q  275 tcaaat 280  Q
    ||||||    
T  31641619 tcaaat 31641624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 9118880 - 9118925
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||||||||| |  |||||| |||||||||    
T  9118880 agagagaaaattgttgcaaaagttgtcattaaatggatgttcaaat 9118925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 37060372 - 37060327
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| ||||  |||||||||| |||||||||||||||||||    
T  37060372 agagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaat 37060327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 56474768 - 56474825
Alignment:
Q  223 aatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| ||| |||||||||||||||  ||||| |||| |||||||| ||||||||||    
T  56474768 aatgtgagtataagagagaaaattgtcacaaaaattgtaaaaaaatgattgttcaaat 56474825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 56557820 - 56557743
Alignment:
Q  203 tagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| ||| ||  |||||||| |||  ||||||||||||||  |||||||||| | ||||| |||||||||||    
T  56557820 tagagagaaggtaaaaacacaatgtgagtatgagagagaaaattgtcacaaaagttgtcataaaattgttgttcaaat 56557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 108 - 280
Target Start/End: Original strand, 42446180 - 42446352
Alignment:
Q  108 gcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagag 207  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||  |||||||||||||||||  ||||    
T  42446180 gcaatgttatttgaacaacattttcttgtgacaacctattagacaaccaaataatacaaagaaatttaggtaatggcacaaaaatcaaagcaatagagag 42446279  T
Q  208 agaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    | ||||||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||| |||||||||||    
T  42446280 aaaaagtagaaggacaatgtgagtaagagagagaaagttgttgcaaaagttgtcaaaaaatagttgttcaaat 42446352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 280
Target Start/End: Original strand, 13089672 - 13089843
Alignment:
Q  109 caatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagaga 208  Q
    ||||||||||||||||| | |||||| ||| ||||| ||  ||||| |||| ||||||||||||||||||||||| |||||||||||||||||  |||||    
T  13089672 caatgttatttgaacaaccatttcttatgacaaccttttgaacaattaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagaga 13089771  T
Q  209 gaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     ||||||||| || |||||| |||  | ||||||| ||||  |||||||||| |||||||||||||||||||    
T  13089772 taaagtagaatgataatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaat 13089843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 32872783 - 32872959
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||||||||||||||| | |||||||||| ||| | || ||||||||||  ||| ||||||||||||||||| | |||||| ||||||||||      
T  32872783 tagagcaatgttatttgaacaaccctttcttgtgacaacttgttggacaatcaaaatataaaaagaaatttaggtagtaacacaaaagtcaaagcaatag 32872882  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    | | ||||||||  || |||||||| |||  | | ||||||||||  |||||||||| ||||||| |||||||||||    
T  32872883 aaaaagaaagtatgagaacaatgtgagtatgaaaaagaaaattgtcacaaaagttgtcaaaaaatagttgttcaaat 32872959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 17097689 - 17097863
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||| |||||||||||||||  | |||||||||| ||  | || |||||  |||| ||||||||||| ||||||||||| ||||||||||||| |||  |    
T  17097689 agagtaatgttatttgaacac-catttcttgtgacaatttgttggacaactaaattatacaaagaaaattaggtagtgacacaaaaatcaaagtaataga 17097787  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     ||||||||||||| ||||||||| |||  ||| ||||||||||  |||||||| | |||||||||||||||||||    
T  17097788 aagagaaagtagaatgacaatgtgagtatgagatagaaaattgtcacaaaagttatcaaaaaatggttgttcaaat 17097863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 612048 - 611874
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||| |||| |||  ||||| |||| ||||| ||||||||  |||| ||||||||||||||||||||||| ||||||||||||||| |  ||    
T  612048 gagcaatgttatatgaaaaataatttctcgtgacaaccttttagacaactaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcagtagag 611949  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| || || || |||||| |||  ||||||||| ||||  |||||||||| ||||| |  ||||||||||    
T  611948 agagaaaataaaatgataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtaattgttcaaat 611874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 248
Target Start/End: Complemental strand, 21211001 - 21210860
Alignment:
Q  107 agcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtaga 206  Q
    ||||||||||||||||||| |||||  ||||| ||| ||||  |||| || || |||||||||||||||||||||  ||||||||| ||||||||  |||    
T  21211001 agcaatgttatttgaacaacctttttatgtgacaacttattgaacaaccacattatacaaagaaatttaggtagtagtacaaaaattaaagcaatagaga 21210902  T
Q  207 gagaaagtagaaggacaatgtgggtaaaagagagaaaattgt 248  Q
    ||||||||||||| | |||||| |||  ||||||||| ||||    
T  21210901 gagaaagtagaagaataatgtgtgtatgagagagaaagttgt 21210860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 31748520 - 31748346
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||| ||||||||||||||||| ||| |||||| ||| |||| ||||||||||| |||||||||||||||||| ||   |||||||||||||||||  |     
T  31748520 gagcgatgttatttgaacaatcattttttgtgacaacttattggacaatcaaattatacaaagaaatttaggttgtagcacaaaaatcaaagcaatagat 31748421  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||  || || |||    ||| |||||| ||| ||||  |||||||||| ||||||| ||||| |||||    
T  31748420 agagaaagtgaaaagataatagaagtataagagaaaaagttgtcacaaaagttgtaaaaaaatagttgtacaaat 31748346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 16971987 - 16972108
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||||| ||| |||||| ||| | ||| |||||||||| ||||||||  ||||||  | ||| ||||||||||||| |||  ||    
T  16971987 gagcaatgttatttgaacaatcatttattgtgacaacttcttatacaatcaaattatacaaagggatttagagactgacacaaaaatcaaagtaatagag 16972086  T
Q  206 agagaaagtagaaggacaatgt 227  Q
    |||||||||||||| |||||||    
T  16972087 agagaaagtagaagaacaatgt 16972108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 107 - 210
Target Start/End: Complemental strand, 39195927 - 39195824
Alignment:
Q  107 agcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtaga 206  Q
    |||||||||||||||||||| ||||  ||||| ||  | || ||||| || || |||||||||||||||||||||||||||||||||||||||||  |||    
T  39195927 agcaatgttatttgaacaatttttttatgtgacaatttgttggacaaccacattatacaaagaaatttaggtagtgatacaaaaatcaaagcaatagaga 39195828  T
Q  207 gaga 210  Q
    ||||    
T  39195827 gaga 39195824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 19521960 - 19522064
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| |||||||||||||||||  |||||||||||| || || |||||| |||  | ||||||| ||||  ||||||||| ||||||||||||||    
T  19521960 aggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtatgaaagagaaagttgtcacaaaagttg-taaaaaatggttgt 19522058  T
Q  275 tcaaat 280  Q
    ||||||    
T  19522059 tcaaat 19522064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 33037647 - 33037530
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| |||||||||||||||||  ||||| |||||| || || |||||| |||  ||||||||| ||||   |||||||| |    
T  33037647 tacaaaggaaatgaggtagtgacacaaaaatcaaagcaatagagagaaaaagtaaaaagataatgtgagtatgagagagaaagttgtcataaaagttg-t 33037549  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  33037548 aaaaaatggttgttcaaat 33037530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 12739951 - 12739847
Alignment:
Q  110 aatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagag 209  Q
    ||||||||||||||||| |||| || ||||||  | || ||||| ||||| ||||||||||||||||||||    |||||||||||||||||  ||||||    
T  12739951 aatgttatttgaacaatatttt-ttatgataatttgttggacaaccaaattatacaaagaaatttaggtagaagcacaaaaatcaaagcaatagagagag 12739853  T
Q  210 aaagta 215  Q
    ||||||    
T  12739852 aaagta 12739847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 12802774 - 12802670
Alignment:
Q  110 aatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagag 209  Q
    ||||||||||||||||| |||| || ||||||  | || ||||| ||||| ||||||||||||||||||||    |||||||||||||||||  ||||||    
T  12802774 aatgttatttgaacaatatttt-ttatgataatttgttggacaaccaaattatacaaagaaatttaggtagaagcacaaaaatcaaagcaatagagagag 12802676  T
Q  210 aaagta 215  Q
    ||||||    
T  12802675 aaagta 12802670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 22649618 - 22649722
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| |||||||  |||||||| | ||||||||||| || || |||||| |||  ||||||||||||||  ||||| ||| ||||||||||||||    
T  22649618 aggtagtgacacaaaaactaaagcaatatggagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaaattg-taaaaaatggttgt 22649716  T
Q  275 tcaaat 280  Q
    ||||||    
T  22649717 tcaaat 22649722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 280
Target Start/End: Original strand, 19981876 - 19982047
Alignment:
Q  109 caatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagaga 208  Q
    ||||||||||| |||||  ||||||| ||| ||  | || |||||| |||| ||||||| |||||||| |||||  ||||||||||||| |||  | |||    
T  19981876 caatgttatttaaacaacattttcttatgacaatttgttggacaattaaattatacaaaaaaatttagatagtggcacaaaaatcaaagtaatagaaaga 19981975  T
Q  209 gaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||   || |||  ||||| ||||||||  ||||| || | |||||||| ||||| ||||    
T  19981976 gaaagtagaaggacaccatgagtatgagagaaaaaattgtcacaaaaattatcaaaaaatgattgttaaaat 19982047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 7287133 - 7287251
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||||||| ||||||| |||| ||||  |||||||||||| ||  | |||||| |||  | ||||||| ||||  ||||||||||     
T  7287133 tacaaagaaaatgaggtagtgacacaaaaaccaaaacaatagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgta 7287232  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||| ||||    
T  7287233 aaaaaatggttgtttaaat 7287251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 35646510 - 35646392
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||| ||||||||| ||||||||||||| ||  | |||||| |||  ||||||||| || |  | |||||| |     
T  35646510 tacaaaggaaatgaggtagtgacacaaaaaccaaagcaatatagagagaaagtaaaaaaataatgtgagtatgagagagaaagttatcactaaagttata 35646411  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  35646410 aaaaaatggttgttcaaat 35646392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 18660863 - 18660769
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||  |||||||||||| || || || ||| |||  ||||||||||||||  ||||||||| | ||||||||||||||||||    
T  18660863 acaaaaaccaaagcaatagagagagaaagtaaaaagataacgtgagtatgagagagaaaattgtcacaaaagttg-tcaaaaatggttgttcaaat 18660769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 26791211 - 26791305
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||  |||||||||||| || || |||||| | |  ||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  26791211 acaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagcatgagagagaaagttgtcacaaaagttg-taaaaaatggttgttcaaat 26791305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 5168310 - 5168193
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||||||  |||||||||||||||||  |||||||||||| || || |||||| |||  ||||| ||| ||||  | ||||||| |    
T  5168310 tacaaagaaaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagataaagttgtcactaaagttg-t 5168212  T
Q  262 aaaaaatggttgttcaaat 280  Q
     ||||| ||||||||||||    
T  5168211 gaaaaacggttgttcaaat 5168193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 28306076 - 28306193
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||||||  ||||| | |||||||||  ||||||||||||  | || |||||| |||  ||||| ||| ||||  ||||||||| |    
T  28306076 tacaaagaaaatgaggtagtggcacaaagaccaaagcaatagagagagaaagtaagaagataatgtgagtatgagagataaagttgtcacaaaagttg-t 28306174  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  28306175 aaaaaatggttgttcaaat 28306193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 32478442 - 32478496
Alignment:
Q  165 aaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaag 219  Q
    ||||||||||||||||||| | |||||||||||||||  ||||||||| ||||||    
T  32478442 aaagaaatttaggtagtgacataaaaatcaaagcaatagagagagaaaatagaag 32478496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 36739062 - 36738961
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  ||| ||||| ||||||||||| ||    
T  36739062 aggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaagagttg-taaaaaatggtggt 36738964  T
Q  275 tca 277  Q
    |||    
T  36738963 tca 36738961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 39195821 - 39195727
Alignment:
Q  186 caaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||  |||||||||||||||| |||||||  |||  ||||||||| ||||  ||||| || | ||||| || ||||||||||    
T  39195821 caaaaatcaaagcaatagagagagaaagtagaagaacaatgtctgtatgagagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaat 39195727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 43441793 - 43441748
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||    
T  43441793 agagagaaagttgttgcaaaagttgttacaaaatggatgttcaaat 43441748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 280
Target Start/End: Original strand, 8675403 - 8675494
Alignment:
Q  188 aaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||  ||||| |||||| || |  |||||| |||  |||||||||||||||||||||||| | | ||||||| |||||||||    
T  8675403 aaaatcaaagcaatagagagataaagtaaaaagt-aatgtgagtatgagagagaaaattgttgcaaaagttatcacaaaatggatgttcaaat 8675494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 280
Target Start/End: Complemental strand, 11954617 - 11954441
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||||||||||||||| | ||| || ||| ||| | ||| ||||  |||| ||||||||  | |||| |||||  ||||||||||||| |||      
T  11954617 tagagcaatgttatttgaacaaccatttattttgacaacttcttatacaactaaattatacaaagtgacttagatagtggcacaaaaatcaaagtaatag 11954518  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||| ||||| || ||  |||||||| |||  ||||||||| ||||  ||||| || | ||| ||| |||||||||||    
T  11954517 agaaagaaaataaaataacaatgtgagtatgagagagaaagttgtcacaaaaattataaaacaatagttgttcaaat 11954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 280
Target Start/End: Original strand, 1293100 - 1293147
Alignment:
Q  233 aaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| ||||  |||||||||||||||||||||||| |||||    
T  1293100 aaagagagaaagttgtcacaaaagttgttaaaaaatggttgtacaaat 1293147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 22098360 - 22098265
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| ||||||| |||  |||||||||||| ||  | |||||| |||  ||||||||| ||||  |||||||||||| ||||||||||| |||||    
T  22098360 acaaatatcaaagtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 22098265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 1764326 - 1764234
Alignment:
Q  187 aaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  || |||||| ||||||||| ||||||||||    
T  1764326 aaaaaccaaagcaataaagagagaaagtaaaaagaaaatgtgagtatgagagagaaagttgtcacagaagttg-taaaaaatgattgttcaaat 1764234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 36562944 - 36563049
Alignment:
Q  110 aatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagag 209  Q
    |||||||||||||||| | ||| ||| || ||| | || ||||| ||||  | ||||||||||| ||||| ||| ||||||| | |||||||  ||||||    
T  36562944 aatgttatttgaacaaccctttgttgggacaacttgttggacaaccaaactacacaaagaaattaaggtattgacacaaaaacctaagcaatagagagag 36563043  T
Q  210 aaagta 215  Q
    ||||||    
T  36563044 aaagta 36563049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 23126360 - 23126404
Alignment:
Q  236 gagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||||||||||| |  |||||| |||||||||    
T  23126360 gagagaaaattgttgcaaaagttgtcactaaatggatgttcaaat 23126404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 35075520 - 35075637
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgt 260  Q
    ||||||| |||||||| || || |||||||||||||||||  |||||||||| || ||  | |||||| |||  ||||| ||| ||||  ||  ||||||    
T  35075520 atacaaacaaatttagatattggtacaaaaatcaaagcaa--tagagagaaaataaaaatataatgtgagtatgagagaaaaagttgtcacatcagttgt 35075617  T
Q  261 taaaaaatggttgttcaaat 280  Q
     |||||||| ||||||||||    
T  35075618 caaaaaatgattgttcaaat 35075637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 7e-55; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 108 - 280
Target Start/End: Complemental strand, 33057561 - 33057389
Alignment:
Q  108 gcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagag 207  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | | |||||||||||||||||  ||||    
T  33057561 gcaatgttatttgaacaatcttttcttgtgacaacctattagacaaccaaataatacaaagaaatttaggtaataacacaaaaatcaaagcaatagagag 33057462  T
Q  208 agaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| | |||||| || |||| ||| ||||| ||||| |||||||||||||||||| |||||||||||    
T  33057461 agaaagtaggaagacaatatgagtaagagaaagaaagttgttacaaaagttgttaaaaaatagttgttcaaat 33057389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 106 - 280
Target Start/End: Original strand, 32777594 - 32777768
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    ||||||||||||||||||||||||||||||| ||||| | || ||||| ||||| ||||||||||||||||||||||  ||||||||||||| |||| ||    
T  32777594 gagcaatgttatttgaacaatcttttcttgtaataacttgttggacaaccaaattatacaaagaaatttaggtagtggcacaaaaatcaaagtaatggag 32777693  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||| |||| |||  ||||||||| ||||   ||||||||| |||||||||||||||||||    
T  32777694 agagaaagtagaaggacagtgtgagtatgagagagaaagttgtcataaaagttgtcaaaaaatggttgttcaaat 32777768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 109 - 280
Target Start/End: Original strand, 43081780 - 43081951
Alignment:
Q  109 caatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagaga 208  Q
    |||||||||||||||||  ||||  ||||| ||  | |||||||| || || ||||||||||||||||||||||| ||||| || ||||||||  |||||    
T  43081780 caatgttatttgaacaacatttttatgtgacaatttgttagacaaccacattatacaaagaaatttaggtagtgacacaaatattaaagcaatagagaga 43081879  T
Q  209 gaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| |||||||| ||| |||||||||| ||||   ||||||||| ||||| |||||||||||||    
T  43081880 gaaagtagaagaacaatgtgtgtataagagagaaagttgtcataaaagttgtcaaaaagtggttgttcaaat 43081951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 12007071 - 12007247
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    ||||||||||||||||| ||||   ||| |||||| ||| | || ||||| |||||  ||||||||||||||| |||||  |||||||||||||||||      
T  12007071 tagagcaatgttatttgtacaactatttattgtgacaacttgttggacaaccaaattttacaaagaaatttagatagtggcacaaaaatcaaagcaatag 12007170  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| ||  ||||| |||  ||||||||| ||||  |||||||||| |||||||||||||||||||    
T  12007171 agagagaaagtagaatgatcatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaat 12007247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 13152777 - 13152603
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatc-aaagcaatgta 204  Q
    |||||||| ||||||||||| | |||||| ||| ||||| || |||||  |||| ||||||||||||||||||||||  ||||||||| ||||||||  |    
T  13152777 gagcaatgatatttgaacaaccatttcttatgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaagcaataga 13152678  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| ||||| |||||| |||  ||||||||| ||||  ||||||||| | ||||||||||||||||||    
T  13152677 gagagaaagtaaaaggataatgtgagtatgagagagaaagttgtcacaaaagttg-tcaaaaatggttgttcaaat 13152603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 33845227 - 33845052
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| |||||| ||||| ||  | || ||||| || || ||||||||||||||||||||||| ||||||||||||||||   |    
T  33845227 agagcaatgttatttgaacaaccttttcatgtgacaatttgttggacaaccacattatacaaagaaatttaggtagtgacacaaaaatcaaagcaacaga 33845128  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    || | |||||||||| |||||||| |||  | ||||||| ||||  |||||||||| ||||| ||||| |||||||    
T  33845127 gaaaaaaagtagaagaacaatgtgtgtatgaaagagaaagttgtcacaaaagttgtcaaaaagtggttattcaaat 33845052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 34978481 - 34978306
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||| ||||| ||||| | |||||||||| ||||| || |||||  |||| ||||||||||||||||||||||  ||||||| |||||||||  |    
T  34978481 agagcaatgatattttaacaaccatttcttgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacaaaaaacaaagcaataga 34978382  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| ||||| |||||| |||  ||||||||| ||||  ||||| |||| ||||| || ||||||||||    
T  34978381 gagagaaagtaaaaggataatgtgagtatgagagagaaagttgtcacaaaaattgtcaaaaagtgattgttcaaat 34978306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 37352294 - 37352120
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||| | ||||||||   ||| | || ||||| ||||| ||||||| ||||||||||||||| |||||||||||| || |  ||    
T  37352294 gagcaatgttatttgaacaaccatttcttgtaccaacttgttggacaaccaaattatacaaataaatttaggtagtgacacaaaaatcaaaacagtagag 37352195  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| |||||||  ||  ||||| |||||| |  ||||| |||| |||||||||||||||||||    
T  37352194 agagaaagtagaagggcaatgtgaatatgagagaaaaaattatcacaaaaattgtcaaaaaatggttgttcaaat 37352120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 47448955 - 47448836
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgt 260  Q
    ||||||||||||||||||||||  ||||||| |||||||||  ||| |||||||| ||  |||||||| |||  ||||||||| ||||  ||||||||||    
T  47448955 atacaaagaaatttaggtagtggcacaaaaaccaaagcaatagagaaagaaagtaaaaacacaatgtgagtatgagagagaaagttgtcacaaaagttgt 47448856  T
Q  261 taaaaaatggttgttcaaat 280  Q
     |||||||||||||||||||    
T  47448855 caaaaaatggttgttcaaat 47448836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 15325526 - 15325698
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| |||||  ||||| ||| | || ||||| || || ||||||| |||||||| |||||| |||||||| ||| ||||  |    
T  15325526 agagcaatgttatttgaacaacctttttatgtgacaacttgttggacaaccacattatacaaaaaaatttagatagtgacacaaaaataaaaacaataga 15325625  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| ||||| || ||   ||||||||| ||||  ||||||||| | ||||||| ||||||||||    
T  15325626 gagagaaagtagaagaacaatatgtgt--gagagagaaagttgtcacaaaagttg-tcaaaaatgattgttcaaat 15325698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 228
Target Start/End: Original strand, 45419946 - 45420070
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    ||||||||| |||||||||||| | |||||| ||| ||||| || |||||  |||| ||||||||||||||||||||||  |||||||||||| ||||      
T  45419946 tagagcaatattatttgaacaaccatttcttttgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaacaatag 45420045  T
Q  204 agagagaaagtagaaggacaatgtg 228  Q
    |||||||||||| || || ||||||    
T  45420046 agagagaaagtaaaatgataatgtg 45420070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 280
Target Start/End: Complemental strand, 21103193 - 21103022
Alignment:
Q  109 caatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagaga 208  Q
    ||||| ||||||||||| | |||||||||||||| | || |||||  || | |||||||||||||||| |||||  | |||||||||||||||  |||||    
T  21103193 caatgatatttgaacaaccatttcttgtgataacttgttggacaactaacttatacaaagaaatttagatagtggcataaaaatcaaagcaataaagaga 21103094  T
Q  209 gaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     |||||| ||  | |||||  ||| |||| ||||| ||||  ||||| ||||| |||||| |||||||||||    
T  21103093 taaagtaaaaaaataatgtaagtataagatagaaagttgtcacaaaaattgtttaaaaatagttgttcaaat 21103022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 28249460 - 28249551
Alignment:
Q  109 caatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaa 200  Q
    ||||||||||||||||| | |||||||||| ||| | || |||||  |||| ||||||||||||||| ||||||| ||||||||||||||||    
T  28249460 caatgttatttgaacaaccatttcttgtgacaactttttggacaactaaattatacaaagaaatttaagtagtgacacaaaaatcaaagcaa 28249551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 46881086 - 46880912
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||| | ||| || ||| ||  | ||| |||| ||||| |||||| || |||||| |||||    ||||||||||| |||  ||    
T  46881086 gagcaatgttatttgaacaaccctttattatgacaattttttatacaaccaaattatacaacgacatttagatagtggcgaaaaaatcaaagtaatagag 46880987  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| |||||||| ||||| || |||  |||||||||||| | |||||| || | |||||||||||||||||||    
T  46880986 agagatagtagaagaacaatatgagtatgagagagaaaattatcgcaaaaattatcaaaaaatggttgttcaaat 46880912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 29723812 - 29723916
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    ||||||||||||||| |||| | ||| |||||| ||| | || ||||| |||||  ||||||||||||||| ||||| ||||||||||||||||||  ||    
T  29723812 gagcaatgttatttgtacaaccatttattgtgacaacttgttggacaaccaaattttacaaagaaatttagatagtggtacaaaaatcaaagcaatagag 29723911  T
Q  206 agaga 210  Q
    |||||    
T  29723912 agaga 29723916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 2008719 - 2008823
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||| | |||  ||||| ||| | || ||||| || || ||||||||||||||||||||||  ||||| |||||||||||  ||    
T  2008719 gagcaatgttatttgaacaaccattttatgtgacaacttgttggacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagag 2008818  T
Q  206 agaga 210  Q
    |||||    
T  2008819 agaga 2008823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 2008843 - 2008919
Alignment:
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||| |||||||| |||  ||||||||| ||||  |||||||||| ||||| |||||||||||||    
T  2008843 agagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaat 2008919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 280
Target Start/End: Complemental strand, 48062181 - 48062066
Alignment:
Q  165 aaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaa 264  Q
    ||||||| | ||||| ||| ||||||| |||| ||||  |||||||||||| ||  | ||| || ||| |||||||||| ||||| |||||||||| |||    
T  48062181 aaagaaaatgaggtattgacacaaaaaccaaaacaatagagagagaaagtaaaaacataatatgagtataagagagaaagttgttacaaaagttgtaaaa 48062082  T
Q  265 aaatggttgttcaaat 280  Q
    ||||| ||||||||||    
T  48062081 aaatgattgttcaaat 48062066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 248
Target Start/End: Original strand, 43807700 - 43807842
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    ||||| |||||||||||||| | |||||| ||| ||  | ||  |||| ||||| ||||||||| ||||| ||||||| ||||||||||||  |||  |     
T  43807700 gagcagtgttatttgaacaaccctttcttatgacaatttgttgtacaaccaaattatacaaagacatttaagtagtgacacaaaaatcaaattaatagaa 43807799  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgt 248  Q
    |||||||||| ||| |||||||| |||  ||||| ||||||||    
T  43807800 agagaaagtaaaagaacaatgtgagtatgagagaaaaaattgt 43807842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 40854621 - 40854706
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatgg 270  Q
    |||||||||||||||||  |||||||||||| ||  | |||||| |||  ||||||||||||||  |||||||||||| |||||||    
T  40854621 acaaaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgagagagaaaattgtcacaaaagttgttagaaaatgg 40854706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 243
Target Start/End: Complemental strand, 27570529 - 27570390
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||||||| || ||||   ||| |||||| ||| |||| ||||| |||||  ||||||||||||| | |||||  |||||||||||||||||      
T  27570529 tagagcaatgttatctgtacaactatttattgtgacaacttattggacaaccaaattttacaaagaaattttgatagtggcacaaaaatcaaagcaatag 27570430  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaa 243  Q
    ||| | ||||||||| ||  ||||| |||  |||||||||    
T  27570429 agaaaaaaagtagaatgatcatgtgagtatgagagagaaa 27570390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 31445422 - 31445327
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||  |||||||||||| ||  | |||||| |||  | | ||||| ||||  |||||||||| |||||||||||||||||||    
T  31445422 acaaaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgaaaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaat 31445327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 26749189 - 26749079
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| | ||| |||||| || || || |||||  |||| ||||||||| ||||||||  ||  |||| ||||||||||||  |    
T  26749189 agagcaatgttatttgaacaaccattttttgtgacaatcttttggacaactaaattatacaaagagatttaggttatggcacaacaatcaaagcaataga 26749090  T
Q  205 gagagaaagta 215  Q
    || ||||||||    
T  26749089 gaaagaaagta 26749079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 38861223 - 38861106
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||| ||||  |||||||||||| || || ||| |||||| || ||||||| ||||  ||||||||| |    
T  38861223 tacaaagtaaataaggtagtggcacaaaaaccaaaacaatagagagagaaagtaaaaagataatttgggtataaaagagaaagttgtcacaaaagttg-t 38861125  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||| ||||||||||    
T  38861124 aaaaaatgattgttcaaat 38861106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 30941504 - 30941396
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaat----gtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatgg 270  Q
    ||||| ||| |||||||||||||||||      |||||||||||| || || |||||| |||  ||||||||| ||||  ||||||||| ||||||||||    
T  30941504 aggtattgacacaaaaatcaaagcaatagagagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttg-taaaaaatgg 30941406  T
Q  271 ttgttcaaat 280  Q
    ||||||||||    
T  30941405 ttgttcaaat 30941396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 3148847 - 3148749
Alignment:
Q  169 aaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaa 267  Q
    |||||||| |||||| ||||| ||||||| |||  |||||||||||||||    |||||  ||| |||||||||||||||   ||||||||| ||||||    
T  3148847 aaatttagatagtgacacaaatatcaaagtaatagagagagaaagtagaacagaaatgtatgtataagagagaaaattgtcataaaagttgtcaaaaaa 3148749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 9363515 - 9363397
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||||||  || ||| |||||| |||||||||| |||| |||||||||||  ||  | |||||| |||  ||||| ||| ||||  |||||||||||    
T  9363515 tacaaagaaaagtatgtattgatacgaaaatcaaagtaatggagagagaaagtcaaaatataatgtgtgtattagagataaagttgtcacaaaagttgtt 9363416  T
Q  262 aaaaaatggttgttcaaat 280  Q
    | |||||| |||| |||||    
T  9363415 ataaaatgattgtacaaat 9363397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 41430121 - 41430207
Alignment:
Q  188 aaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    |||| |||||||||  ||||| |||||| ||  | |||||| ||| |||||||||| ||||  |||||||||||| |||||||||||    
T  41430121 aaaaccaaagcaatagagagataaagtaaaaatataatgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggttgt 41430207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 280
Target Start/End: Original strand, 44189270 - 44189371
Alignment:
Q  178 tagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttca 277  Q
    |||||| ||||||| ||||| |||  |||||||||||| || || |||||| |||  ||||||||| |||   ||||||||  |||||||||||||||||    
T  44189270 tagtgacacaaaaaccaaagtaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgacacaaaagtt-ataaaaaatggttgttca 44189368  T
Q  278 aat 280  Q
    |||    
T  44189369 aat 44189371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 44895516 - 44895633
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||||||||  |||||||||||| || || || |||  ||  ||| ||||| ||||  ||||||||| |    
T  44895516 tacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataacgtgaatatgagatagaaagttgtcacaaaagttg-t 44895614  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  44895615 aaaaaatggttgttcaaat 44895633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 8904348 - 8904413
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaa 171  Q
    |||||||||| |||||||||  ||||||||||||||| | || || |||||||| ||| |||||||    
T  8904348 gagcaatgttttttgaacaacattttcttgtgataacttgttggataatcaaattatataaagaaa 8904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 16980364 - 16980307
Alignment:
Q  223 aatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| ||| |||||||||| |||||||||||||||| | ||||||  |||||||||    
T  16980364 aatgtgagtataagagagaaagttgttgcaaaagttgtcacaaaatgaatgttcaaat 16980307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 22623439 - 22623398
Alignment:
Q  239 agaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||| ||||||||| | |||||||||||||||||||    
T  22623439 agaaaattgtcgcaaaagttatcaaaaaatggttgttcaaat 22623398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 25192901 - 25192945
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||    
T  25192901 agagagaaagttgttacaaaagttgt-aaaaaatggttgttcaaat 25192945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 46578102 - 46578183
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaa 266  Q
    |||||||||||| ||||  |||||||||||| || || ||||||  ||  ||||| ||||||||| |||||||||| |||||    
T  46578102 acaaaaatcaaatcaatagagagagaaagtaaaatgataatgtgaatatgagagataaaattgttacaaaagttgtcaaaaa 46578183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 280
Target Start/End: Complemental strand, 17002374 - 17002346
Alignment:
Q  252 aaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||||||||||||    
T  17002374 aaaagttgttaaaaaatggttgttcaaat 17002346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 42584902 - 42584818
Alignment:
Q  190 aatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||||||  ||||| |||||| ||  | |||||| |||  ||||||||| ||||  |||||||||||| |||||||||||    
T  42584902 aatcaaagcaatagagagataaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgt 42584818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 7e-55; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 108 - 280
Target Start/End: Complemental strand, 18510857 - 18510685
Alignment:
Q  108 gcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagag 207  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| | |  ||||    
T  18510857 gcaatgttatttgaacaacattttcttgtgacaacctattagacaaccaaataatacaaagaaatttaggtaatgacacaaaaatcaaagaagtagagag 18510758  T
Q  208 agaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||||||| |||| |||| |||| |||||||||||||||| ||||||| |||||||||||    
T  18510757 agaaagtagaaggacaatgtgagtaagagagggaaagttgttgcaaaagttgtcaaaaaatagttgttcaaat 18510685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 115 - 280
Target Start/End: Original strand, 39234076 - 39234241
Alignment:
Q  115 tatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagt 214  Q
    |||||||||||  ||||||||||| |||||||||||||| |||||||||||||||||||||||| |||  |||||||||||| || || ||||| |||||    
T  39234076 tatttgaacaacattttcttgtgacaacctattagacaaccaaataatacaaagaaatttaggtggtggcacaaaaatcaaaacattggagagaaaaagt 39234175  T
Q  215 agaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||  | | ||| ||||| |||||||||||||| | |||||||||||||||||||    
T  39234176 agaaggacaatgtgaatgagagaaagaaagttgttgcaaaagttatcaaaaaatggttgttcaaat 39234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 37316701 - 37316876
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| |||||  | ||| ||| | || ||||| || || ||||||||||||||||||||||| ||||| |||||||||||  |    
T  37316701 agagcaatgttatttgaacaacctttttctatgacaacttgttggacaaccacattatacaaagaaatttaggtagtgacacaaatatcaaagcaataga 37316800  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| |||||||| |||  ||||||||| ||||  |||||||||| ||||| |||||||||||||    
T  37316801 gagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaat 37316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 106 - 280
Target Start/End: Original strand, 37731087 - 37731261
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||| |||||  ||||| ||| | ||  |||| || || ||||||||||||||||||||||  ||||| |||||||||||  ||    
T  37731087 gagcaatgttatttgaacaacctttttatgtgacaacttgttgcacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagag 37731186  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    || ||||||||||| |||||||| |||  ||||||||||||||  |||||||||| ||||| |||||||||||||    
T  37731187 agcgaaagtagaagaacaatgtgtgtatgagagagaaaattgtcacaaaagttgtcaaaaagtggttgttcaaat 37731261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 11965978 - 11965803
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| |||||  ||||| ||| | || ||||| || || ||||| |||||||||| |||||  |||||||||||||||||  |    
T  11965978 agagcaatgttatttgaacaacctttttatgtgacaacttgttggacaaccacattatacatagaaatttagatagtggcacaaaaatcaaagcaataga 11965879  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| |||||||| |||  |||||||||  |||  |||||||||| ||||| || ||||||||||    
T  11965878 gagagaaagtagaagaacaatgtgtgtatgagagagaaagctgtcacaaaagttgtcaaaaagtgattgttcaaat 11965803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 26480975 - 26481151
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||||||||||||||| | ||| |||||| ||| | ||| |||| ||||| ||||||||  |||||| |||||| ||||||||||||| |||      
T  26480975 tagagcaatgttatttgaacaaccctttattgtgacaacttcttatacaaccaaattatacaaagggatttagatagtgacacaaaaatcaaagtaatag 26481074  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||| |||||||||||  |||| ||| |||  ||| ||||||||||  ||||||||||||||||||  ||||||||||    
T  26481075 agaaagaaagtagaaaaacaacgtgagtatgagaaagaaaattgtcacaaaagttgttaaaaaataattgttcaaat 26481151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 109 - 280
Target Start/End: Complemental strand, 30831935 - 30831766
Alignment:
Q  109 caatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagaga 208  Q
    ||||||||||||||||||| ||| |||||| ||| | ||| |||||||||| ||||||||  |||||| |||||  ||||||||||||| |||  |||||    
T  30831935 caatgttatttgaacaatcatttattgtgacaacttcttatacaatcaaattatacaaagggatttagatagtggcacaaaaatcaaagtaatagagaga 30831836  T
Q  209 gaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| |||||||| |||  |||||| || ||||  ||||||||| | ||||||||||||||||||    
T  30831835 gaaagtagaagaacaatgtgagtatgagagag-aagttgtgacaaaagttg-tcaaaaatggttgttcaaat 30831766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 36587357 - 36587529
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| | |||||| ||| ||||| || |||||  |||| |||||||||||||||| |||||  ||||||||||||||||  ||    
T  36587357 agagcaatgttatttgaacaaccatttcttctgacaaccttttggacaactaaattatacaaagaaatttagatagtggcacaaaaatcaaagcaa--ta 36587454  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| |||| || || |||||| |||  ||||||||| ||| |  |||| |||| |||||||||||||||||||    
T  36587455 gagagagagtaaaatgataatgtgagtatgagagagaaagttg-tcaaaaaattgtcaaaaaatggttgttcaaat 36587529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 104 - 228
Target Start/End: Complemental strand, 31578620 - 31578496
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||| ||||||||||||| |||||||||| ||| | || |||||  || | ||||||||||||||||||||||| |||||||||||||||||      
T  31578620 tagagcaatgatatttgaacaatcatttcttgtgacaacttgttggacaactaacttatacaaagaaatttaggtagtgacacaaaaatcaaagcaatag 31578521  T
Q  204 agagagaaagtagaaggacaatgtg 228  Q
    ||||| |||||| ||| | ||||||    
T  31578520 agagataaagtaaaagaataatgtg 31578496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 106 - 258
Target Start/End: Original strand, 32944391 - 32944543
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||  |||||||| || | |||||||||||||||| || |||||| |||| ||| ||| ||||||||||||||| |||||||||||||||||  ||    
T  32944391 gagcaatcatatttgaataaccatttcttgtgataaccttttggacaattaaattatataaaaaaatttaggtagtgacacaaaaatcaaagcaatagag 32944490  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagtt 258  Q
    ||| |||||| ||||| ||||||  ||  ||||||||| ||||  ||||||||    
T  32944491 agaaaaagtaaaaggagaatgtgactatgagagagaaagttgtcacaaaagtt 32944543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 14872056 - 14871951
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||| |||||||||||||||| | |||||||| | ||| | |||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||  |    
T  14872056 agagaaatgttatttgaacaaccatttcttgtaacaacttgttagacaatcaaattatacaaagaaatttaggtagtggcacaaaaatcaaaacaataga 14871957  T
Q  205 gagaga 210  Q
    ||||||    
T  14871956 gagaga 14871951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 280
Target Start/End: Complemental strand, 43057235 - 43057074
Alignment:
Q  119 tgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaa 218  Q
    ||||||||  ||| ||||||||| || || |||||  |||| ||| ||| ||||||| ||||||| |||||||||||||||||  ||| | ||| || ||    
T  43057235 tgaacaattattttttgtgataatcttttggacaactaaattatataaataaatttaagtagtgacacaaaaatcaaagcaatagagaaaaaaaataaaa 43057136  T
Q  219 ggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     || |||||| ||| |||||||||| ||||  |||||||||||||||| |||||||||||||    
T  43057135 tgataatgtgagtataagagagaaagttgtcacaaaagttgttaaaaagtggttgttcaaat 43057074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 1079010 - 1079105
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaat 201  Q
    |||||||||||| ||||||| | |||||||||| ||||| ||||||||  |||| ||||||||||||||| | ||||| |||||||||||||||||    
T  1079010 gagcaatgttatatgaacaaccatttcttgtgacaaccttttagacaactaaattatacaaagaaatttaagcagtgacacaaaaatcaaagcaat 1079105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 19916784 - 19916665
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgt 260  Q
    ||||||||||||||||| ||||| ||||| ||||||  |||  |||||||||||||||| |||||||| |||  ||||||||| ||||  ||||| || |    
T  19916784 atacaaagaaatttaggcagtgacacaaatatcaaaataatagagagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaaattat 19916685  T
Q  261 taaaaaatggttgttcaaat 280  Q
    |||||| |||||||||||||    
T  19916684 taaaaagtggttgttcaaat 19916665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 8847669 - 8847549
Alignment:
Q  109 caatgttatttgaacaatcttttct-tgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagag 207  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||| |  || |||||||||||||||| ||||| || ||| |||||||||||  ||||    
T  8847669 caatgttatttgaacaatcttttctatgtgacaacttgttggacaaccgcattatacaaagaaatttagatagtggtataaatatcaaagcaatagagag 8847570  T
Q  208 agaaagtagaaggacaatgtg 228  Q
    |||||||||||| | ||||||    
T  8847569 agaaagtagaagaataatgtg 8847549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 14877174 - 14877069
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||| |||||||||||||||| | |||||||||| ||| | |||||||| |||||   ||||||||||||||||||||  |||||||||||| |||| ||    
T  14877174 agagaaatgttatttgaacaaccatttcttgtgacaacttgttagacaaccaaatttaacaaagaaatttaggtagtggcacaaaaatcaaaacaatata 14877075  T
Q  205 gagaga 210  Q
     |||||    
T  14877074 tagaga 14877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 44239220 - 44239125
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaat 201  Q
    |||||||||||||||||||| | ||| |||||| ||  | || |||||  |||| ||||||||||||||||| ||||| |||||||||||||||||    
T  44239220 gagcaatgttatttgaacaaccatttattgtgacaattttttggacaactaaattatacaaagaaatttaggcagtgacacaaaaatcaaagcaat 44239125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 9990803 - 9990701
Alignment:
Q  177 gtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttc 276  Q
    |||||| |||||||| |||||||||  |||||||||||| || || |||||| ||| |||||||||| ||||  ||||||||| |||||| | |||||||    
T  9990803 gtagtggtacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtataagagagaaagttgtcacaaaagttg-taaaaattagttgttc 9990705  T
Q  277 aaat 280  Q
    ||||    
T  9990704 aaat 9990701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 18254176 - 18254270
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  18254176 acaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttg-taaaaaatggttgttcaaat 18254270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 32477438 - 32477363
Alignment:
Q  183 atacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagtt 258  Q
    ||||||||||||||||||| ||||||||||||| || || |||||| ||| | || ||||||||||  ||||||||    
T  32477438 atacaaaaatcaaagcaatatagagagaaagtaaaaagataatgtgagtatatgaaagaaaattgtcacaaaagtt 32477363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 2076696 - 2076579
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||| ||| |||||||||||||||||  | |||||||||| || || | |||| |||  ||| ||||| || |  ||||||||| |    
T  2076696 tacaaagaaaatgaggtattgacacaaaaatcaaagcaatagaaagagaaagtaaaaagatagtgtgagtaggagaaagaaagttatcacaaaagttg-t 2076598  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  2076597 aaaaaatggttgttcaaat 2076579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 9207717 - 9207600
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||||||||  |||||||||||| ||  | |||||| |||  ||||||||| ||||  ||||||||| |    
T  9207717 tacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttg-t 9207619  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||| ||||||||||    
T  9207618 aaaaaatgattgttcaaat 9207600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 6511365 - 6511261
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| ||||||| |||||||||  | ||||||| || || || |||||| |||  ||||||||| ||||  | |||||||| |||||||||||||    
T  6511365 aggtagtgacacaaaaaccaaagcaatagaaagagaaaataaaaagataatgtgagtatgagagagaaagttgtcactaaagttgt-aaaaaatggttgt 6511267  T
Q  275 tcaaat 280  Q
    ||||||    
T  6511266 tcaaat 6511261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 35589403 - 35589448
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||||||||| | ||||||| |||||||||    
T  35589403 agagagaaaattgttgcaaaagttgtcacaaaatggatgttcaaat 35589448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 41042356 - 41042264
Alignment:
Q  187 aaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| |||||||||  |||||||||||| || || |||||| |||  ||||| ||| ||||  |||||||||||| |||||||||||||||||    
T  41042356 aaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaagttgtta-aaaatggttgttcaaat 41042264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 228
Target Start/End: Original strand, 36417289 - 36417408
Alignment:
Q  109 caatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagaga 208  Q
    ||||||||||||||| ||  |||  ||||| ||| |||| ||||| ||  | ||| ||| || ||||||| ||| ||||||||||||||||||  | |||    
T  36417289 caatgttatttgaacgattgttttatgtgacaacttattggacaaccacgttatataaaaaagtttaggtggtggtacaaaaatcaaagcaataaaaaga 36417388  T
Q  209 gaaagtagaaggacaatgtg 228  Q
    ||||||||||| | ||||||    
T  36417389 gaaagtagaagtaaaatgtg 36417408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 280
Target Start/End: Complemental strand, 37003750 - 37003621
Alignment:
Q  150 acaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgtt 249  Q
    |||| ||||| ||||||||   ||||| |||||  | ||||||||||| |||  |||||||| ||||||| |||||||| |||  ||||||||| ||||     
T  37003750 acaaccaaattatacaaaggggtttagatagtggcataaaaatcaaagtaataaagagagaatgtagaagaacaatgtgagtatgagagagaaagttgtc 37003651  T
Q  250 gcaaaagttgttaaaaaatggttgttcaaat 280  Q
     |||||  | ||||||||| |||||||||||    
T  37003650 acaaaa-atattaaaaaatagttgttcaaat 37003621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 5031978 - 5031933
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| |||| ||||||||||||| ||||||||||| |||||    
T  5031978 agagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaat 5031933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 14871933 - 14871860
Alignment:
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttca 277  Q
    ||||||| | ||||||| ||||||| |||  |||||||||  |||  |||||||||| ||||||||||||||||    
T  14871933 agagagagaatagaagggcaatgtgagtatgagagagaaagctgtcacaaaagttgtcaaaaaatggttgttca 14871860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 38821453 - 38821376
Alignment:
Q  203 tagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| ||| ||  |||||||| |||  ||| ||||||||||  |||||||||| | |||||||||||||||||    
T  38821453 tagagagaaggtaaaaacacaatgtgagtatgagaaagaaaattgtcacaaaagttgtcataaaatggttgttcaaat 38821376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 41195688 - 41195607
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaa 266  Q
    ||||||| |||||||||  |||||||||||| || |  |||||| |||  ||||||||||||||  |||||||||| |||||    
T  41195688 acaaaaaccaaagcaatagagagagaaagtaaaaaggtaatgtgagtatgagagagaaaattgtcacaaaagttgtcaaaaa 41195607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 42421855 - 42421955
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||  ||||| | |||||||||  |||||||||||| || || |||||| |||  || || ||||||||  ||||||||| ||||||||||||||    
T  42421855 aggtagtggcacaaacaccaaagcaataaagagagaaagtaaaaagaaaatgtgagtatgagtgacaaaattgtcacaaaagttg-taaaaaatggttgt 42421953  T
Q  275 tc 276  Q
    ||    
T  42421954 tc 42421955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 28481835 - 28481791
Alignment:
Q  236 gagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| | ||||| |||||||||| |||||||||||||||||||    
T  28481835 gagagagagttgttccaaaagttgtcaaaaaatggttgttcaaat 28481791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 115 - 280
Target Start/End: Complemental strand, 4672166 - 4672001
Alignment:
Q  115 tatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagt 214  Q
    |||||||||||  ||||||||||| | |||||||||||| |||||||||||||||||||||||  ||| ||||||||||||| || || |||||||||||    
T  4672166 tatttgaacaactttttcttgtgacaccctattagacaaccaaataatacaaagaaatttaggcggtggtacaaaaatcaaaacattggagagagaaagt 4672067  T
Q  215 agaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||| || | ||||| ||| |||||||||||||||| |||||||||||||||||||    
T  4672066 agaaggacaatgtgagtgagagagataaagttgttgcaaaagttgtcaaaaaatggttgttcaaat 4672001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 33451450 - 33451624
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||||||||||||||| | |||||||||| ||| | |||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||      
T  33451450 tagagcaatgttatttgaacaaccctttcttgtgacaacttgttagacaatcaaattatacaaagaaa-ttaggtagtggcacaaaaatcaaagcaatag 33451548  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| ||||||||| |||  ||||||||| ||||  |||||||||| |||||||| ||||||||||    
T  33451549 agagagaaagtagaa-gacaatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaat 33451624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 280
Target Start/End: Complemental strand, 1068792 - 1068616
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||||||||||||||| |||||  ||||| ||| | || ||||| || || |||||||||||||||||||||| |||||| |||||||||||      
T  1068792 tagagcaatgttatttgaacaacctttttatgtgacaacttgttggacaaccacattatacaaagaaatttaggtagtgttacaaatatcaaagcaatag 1068693  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||| |||||||| |||  ||||||||| ||||  |||||||||| ||||| |||||||||||||    
T  1068692 agagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaat 1068616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 25987673 - 25987848
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||| |||||||||||||||| | |||||||||| ||||| ||  ||||  |||| ||||||||||||||||||||||| |||||||||||||||||  |    
T  25987673 agagtaatgttatttgaacaaccatttcttgtgacaaccttttgaacaactaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaataga 25987772  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||| ||||||||| || |||||| |||  ||||| ||| ||||  |||||||||| |||||||||||||||||||    
T  25987773 gagataaagtagaatgataatgtgagtatgagagataaagttgtcacaaaagttgtaaaaaaatggttgttcaaat 25987848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 106 - 248
Target Start/End: Complemental strand, 44091070 - 44090928
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||| |||||| ||||| ||| | || ||||| || || ||||||||||||||||||||||| |||||||||||||||||  ||    
T  44091070 gagcaatgttatttgaacaaccttttcatgtgacaactttttggacaaccacattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagag 44090971  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgt 248  Q
    |||||||||||||| |||||||| |||  ||||||||||||||    
T  44090970 agagaaagtagaagaacaatgtgtgtatgagagagaaaattgt 44090928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 106 - 280
Target Start/End: Original strand, 34435624 - 34435798
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||| |||||  ||||| ||| | ||  |||| || || ||||||||||||||||||||||  ||||| |||||||||||  ||    
T  34435624 gagcaatgttatttgaacaacctttttatgtgacaacttgttgcacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagag 34435723  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    || ||||||||||| |||||||| |||  ||||||||||||||  |||||||||| ||||| |||||||||||||    
T  34435724 agcgaaagtagaagaacaatgtgtgtatgagagagaaaattgtcacaaaagttgtcaaaaagtggttgttcaaat 34435798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 104 - 280
Target Start/End: Complemental strand, 44061903 - 44061727
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    ||||| ||||||||||||||||   |||||||||||||  | || ||||| ||||| |||||||||||||||| |||||| ||||||||||||||||       
T  44061903 tagagtaatgttatttgaacaactatttcttgtgataatttgttggacaaccaaattatacaaagaaatttagatagtgacacaaaaatcaaagcaacag 44061804  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    | |||||||||| || || |||||| |||  ||||||||| ||||  |||||||| | |||||||||||||||||||    
T  44061803 aaagagaaagtaaaatgataatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaat 44061727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 15716862 - 15717037
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||||||||||||||||||  ||||  ||||| ||| | || ||||| || || ||||||||||||||||||||||||||||| |||||||||||  |    
T  15716862 agagcaatgttatttgaacaacttttttatgtgacaacttgttggacaaccacattatacaaagaaatttaggtagtgatacaaatatcaaagcaataga 15716961  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| |||||||  |||  ||||| ||| ||||  |||||||| | ||||| || || |||||||    
T  15716962 gagagaaagtagaagaacaatgtatgtatgagagaaaaagttgtcacaaaagttatcaaaaagtgattattcaaat 15717037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 26027081 - 26026906
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||    |||||||||| ||| | || | ||| ||||| |||||||||||||||| ||||||||||||||| ||||||||  |    
T  26027081 agagcaatgttatttgaacagctatttcttgtgacaacttgttggccaaccaaattatacaaagaaatttagatagtgatacaaaaattaaagcaataga 26026982  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     ||||||| || || || |||||| |||  ||| ||||| ||||  |||||||||| |||||||||||||||||||    
T  26026981 aagagaaaataaaatgataatgtgagtatgagaaagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaat 26026906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 28772012 - 28772185
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||| ||||||||||| | |||||||||| ||||| || |||||  |||| ||||||||||||||||||||||  |||||||||||| |||  ||    
T  28772012 agagcaatgatatttgaacaaccatttcttgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaacaa--ta 28772109  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     ||||| |||| || || || |||||||  ||||||||| || |  ||||| |||| |||||||||||||||||||    
T  28772110 aagagagagtaaaatgataaagtgggtatgagagagaaagttatcacaaaaattgtcaaaaaatggttgttcaaat 28772185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 33107753 - 33107928
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| |||||  ||||| ||  | || ||||| || || |||||||||||||||||||||   ||||| ||||||||||   |    
T  33107753 agagcaatgttatttgaacaacctttttatgtgacaatttgttggacaaccacattatacaaagaaatttaggtagttgcacaaatatcaaagcaacaga 33107852  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| |||||||| |||  || |||||| ||||   ||||||||| ||||| |||||||||||||    
T  33107853 gagagaaagtagaagaacaatgtgtgtatgagggagaaagttgtcataaaagttgtcaaaaagtggttgttcaaat 33107928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 280
Target Start/End: Original strand, 5600903 - 5601048
Alignment:
Q  135 gtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaa 234  Q
    |||||||| | || ||||| |||||  ||||||||||||||| | |||| |||||||||||||||||  |||||||||||||||  |  ||||| |||      
T  5600903 gtgataacttgttggacaaccaaattttacaaagaaatttagatggtgacacaaaaatcaaagcaataaagagagaaagtagaataatcatgtgagtatg 5601002  T
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| ||||||||  |||||||||| |||||||||||||||||||    
T  5601003 agagaaaaaattgtcacaaaagttgtcaaaaaatggttgttcaaat 5601048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 280
Target Start/End: Complemental strand, 5639717 - 5639572
Alignment:
Q  135 gtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaa 234  Q
    |||||||| | || ||||| |||||  ||||||||||||||| | |||| |||||||||||||||||  |||||||||||||||  |  ||||| |||      
T  5639717 gtgataacttgttggacaaccaaattttacaaagaaatttagatggtgacacaaaaatcaaagcaataaagagagaaagtagaataatcatgtgagtatg 5639618  T
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| ||||||||  |||||||||| |||||||||||||||||||    
T  5639617 agagaaaaaattgtcacaaaagttgtcaaaaaatggttgttcaaat 5639572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 37172244 - 37172127
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    ||||||||||||||||||||| ||||||||| | ||  | || ||||| ||||| ||||||||||||||||||| ||| ||||||||||||| |||| |     
T  37172244 gagcaatgttatttgaacaattttttcttgtaacaatttgttggacaaccaaattatacaaagaaatttaggtaatgacacaaaaatcaaagtaatggaa 37172145  T
Q  206 agagaaagtagaaggaca 223  Q
    ||||||| ||||||||||    
T  37172144 agagaaaatagaaggaca 37172127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 280
Target Start/End: Original strand, 2730849 - 2731022
Alignment:
Q  107 agcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtaga 206  Q
    ||||||| |||||||||||   |||||||||| ||||| ||  | ||  |||| ||||||| |||||||| |||||  ||||||||||||||| |  |||    
T  2730849 agcaatgatatttgaacaacaatttcttgtgacaaccttttgaataactaaattatacaaataaatttagatagtggcacaaaaatcaaagcagttgaga 2730948  T
Q  207 gagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| || || ||||||  ||  ||||||||| ||||| |||||||||| ||||| |||||||||||||    
T  2730949 gagaaagtaaaaagataatgtgaatatgagagagaaagttgttacaaaagttgtcaaaaagtggttgttcaaat 2731022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 44825618 - 44825466
Alignment:
Q  114 ttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaag 213  Q
    |||| |||||||| ||||||||||| ||| |  | ||||||||||| |||||||||||||||| ||   |||||||||||||||||||  ||||||||||    
T  44825618 ttatatgaacaattttttcttgtgacaacttgattgacaatcaaattatacaaagaaatttagataaatatacaaaaatcaaagcaatagagagagaaag 44825519  T
Q  214 tagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaa 266  Q
    ||||   | |||||| |||  ||||| ||||||||  |||||||||| |||||    
T  44825518 tagataaataatgtgagtatgagagataaaattgtcacaaaagttgtcaaaaa 44825466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 12241257 - 12241134
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||||||||||||||||||  ||||  ||||||||  | || ||||| || || |||||||||||||||| |||||| | |||||||||||||||  |    
T  12241257 agagcaatgttatttgaacaacttttttatgtgataatttgttggacaaccacattatacaaagaaatttagatagtgacataaaaatcaaagcaataga 12241158  T
Q  205 gagagaaagtagaaggacaatgtg 228  Q
    |||| || ||||||| ||||||||    
T  12241157 gagataatgtagaagaacaatgtg 12241134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 31249468 - 31249585
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | |||||||| |||||||| |||||||||  |||||||||||| || || |||||| |||  ||||| ||||||||  ||||||||| |    
T  31249468 tacaaaggaaatgaggtagtggtacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagaaaaaattgtcacaaaagttg-t 31249566  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  31249567 aaaaaatggttgttcaaat 31249585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 280
Target Start/End: Original strand, 45405880 - 45406045
Alignment:
Q  115 tatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagt 214  Q
    |||||||| || | |||||| ||| ||| | || ||||| ||||| ||||||| |||||||  || | | |||||||||||| ||||  |||||||||||    
T  45405880 tatttgaataaccatttcttatgagaacttgttggacaaccaaattatacaaataaatttatataataacacaaaaatcaaaacaatagagagagaaagt 45405979  T
Q  215 agaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| ||||||| |||  ||||| |||||| |  ||||| || ||||||||| |||||||||||    
T  45405980 agaagggcaatgtgagtatgagagaaaaaattatcacaaaaattattaaaaaatagttgttcaaat 45406045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 9630307 - 9630188
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||| |||||   ||| |||||| ||  | ||||||||  |||| ||| ||||||||||||||||||||| ||||||||||| |||  ||    
T  9630307 gagcaatgttatttaaacaactattttttgtgacaatttgttagacaactaaattatataaagaaatttaggtagtgatataaaaatcaaagaaatagag 9630208  T
Q  206 agagaaagtagaaggacaat 225  Q
    | ||||| ||||||||||||    
T  9630207 aaagaaaatagaaggacaat 9630188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 22719567 - 22719450
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | |||||||   ||||||| |||||||||  |||||||||||| || || |||||| | |  ||||||||||||||  ||||||||| |    
T  22719567 tacaaagaaaatgaggtagttgcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagcatgagagagaaaattgtcacaaaagttg-t 22719469  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  22719468 aaaaaatggttgttcaaat 22719450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 27325885 - 27325768
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||||||||  |||||||||||| || ||  ||||| |||  ||||||||| ||||  ||||||||| |    
T  27325885 tacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttg-t 27325787  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  27325786 aaaaaatggttgttcaaat 27325768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 32501140 - 32501257
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||||||||| |||  |||||||| ||| ||  | |||||| |||  |||||||||||||||  |||||||| |    
T  32501140 tacaaaggaaatgaggtagtgacacaaaaatcaaagtaatagagagagaacgtaaaaaaataatgtgagtatgagagagaaaattgttaaaaaagttg-t 32501238  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||| ||||||||||    
T  32501239 aaaaaatgattgttcaaat 32501257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 36874001 - 36874120
Alignment:
Q  107 agcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtaga 206  Q
    ||||||||||||||||||| | ||| |||||||||  | ||| |||| ||||| ||| ||||  |||||| ||||| |||||||||||||  ||  ||||    
T  36874001 agcaatgttatttgaacaaccctttattgtgataattttttatacaaccaaattatataaagggatttagatagtggtacaaaaatcaaaataa--taga 36874098  T
Q  207 gagaaagtagaaggacaatgtg 228  Q
    |||||| |||||| ||||||||    
T  36874099 gagaaaatagaagaacaatgtg 36874120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 34018863 - 34018818
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||||||||| | |||||||||||||||||    
T  34018863 agagagaaaattgttgcaaaagttgtcagaaaatggttgttcaaat 34018818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 35067265 - 35067170
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||  |||||||||||| ||  | |||||| |||  ||||||||| ||||  ||||||||||||| |||||||||| |||||    
T  35067265 acaaaaaccaaagcaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttaagaaatggttgtacaaat 35067170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 10731650 - 10731569
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaa 266  Q
    |||||||||||||||||  |||||||||||| || || ||| || ||| || ||||||| ||||| |||||||||| |||||    
T  10731650 acaaaaatcaaagcaatagagagagaaagtaaaaagataatatgagtataaaagagaaagttgttacaaaagttgtcaaaaa 10731569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 33605062 - 33605139
Alignment:
Q  203 tagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||| |||| ||  |||||||| |||  ||||||||||||||| |||||||| | | |||||||||||||||||    
T  33605062 tagagagagagtaaaaacacaatgtgagtatgagagagaaaattgttccaaaagttatcataaaatggttgttcaaat 33605139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 21526266 - 21526342
Alignment:
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||| ||  | |||||| |||  |||||||||| |||| |||||||||||||||| ||||||| |||||    
T  21526266 agagagaaagtaaaaacataatgtgagtatgagagagaaaactgttacaaaagttgttaaaaagtggttgtacaaat 21526342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 25830212 - 25830307
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| ||||||| |||  |||||||||||| ||  | |||||| |||  ||||||||| ||||  |||||||||||| ||||||||||| |||||    
T  25830212 acaaatatcaaagtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 25830307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 33100414 - 33100530
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||||||  || ||| ||| ||||||||||||| |||  ||||||||| || ||    |||||| |||  ||||||||| ||||  |||||||||||    
T  33100414 tacaaagaaaagtatgtattgacacaaaaatcaaagtaat--agagagaaaataaaaatgtaatgtgagtatgagagagaaagttgtcacaaaagttgtt 33100511  T
Q  262 aaaaaatggttgttcaaat 280  Q
    | |||||||||||||||||    
T  33100512 ataaaatggttgttcaaat 33100530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 43285925 - 43286024
Alignment:
Q  181 tgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| ||||| |||||||||  |||||||||||| ||  | |||||| |||  ||||||||| ||||  |||||||| ||| ||||||||||| |||||    
T  43285925 tgatataaaaaccaaagcaataaagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttattagaaaatggttgtccaaat 43286024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 6440209 - 6440091
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||||||  || ||| ||| ||||||||||||||||   |||||||||||| ||  | |||||| |||  ||||||||| ||||  ||||||||||     
T  6440209 tacaaagaaaagtatgtattgacacaaaaatcaaagcaagaaagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgta 6440110  T
Q  262 aaaaaatggttgttcaaat 280  Q
    || |||| ||||| |||||    
T  6440109 aagaaatagttgtacaaat 6440091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 42733580 - 42733626
Alignment:
Q  234 aagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||  ||||| ||||| ||||||||||||||||||    
T  42733580 aagagagaaaattgtcacaaaaattgtttaaaaatggttgttcaaat 42733626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 43397908 - 43397791
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | || |||||  ||||||| ||||| |||  | |||||||||| ||  | |||||| |||  ||||||||| ||||  ||||||||||     
T  43397908 tacaaagaaaatgagatagtggcacaaaaaccaaagtaatagaaagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtaacaaaagttgt- 43397810  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  43397809 aaaaaatggttgttcaaat 43397791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 67165 - 67222
Alignment:
Q  223 aatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||  ||||||||| ||||  |||||||||||| ||||||||||| |||||    
T  67165 aatgtgggtatgagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 67222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 280
Target Start/End: Original strand, 16872126 - 16872217
Alignment:
Q  188 aaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||  ||||| |||||| || |  |||||| |||  | ||||||| |||||||||||||||| | ||||||| |||||||||    
T  16872126 aaaatcaaagcaatagagagataaagtaaaaagt-aatgtgagtatgatagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaat 16872217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 34476335 - 34476255
Alignment:
Q  111 atgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaa 191  Q
    ||||||||||||||| | ||| |||||| ||| ||| |||||||||||  |||||||| ||| | |||| ||| |||||||    
T  34476335 atgttatttgaacaaccattttttgtgacaacttataagacaatcaaaatatacaaagcaatattggtattgacacaaaaa 34476255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 34718220 - 34718125
Alignment:
Q  184 tacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||||  ||||| |||||| ||  | |||||| |||  ||||||||| ||||  |||||||||| | ||||||| |||||||||    
T  34718220 tacaaaaatcaaagcaatagagagataaagta-aaaaataatgtgagtatgagagagaaagttgtaacaaaagttgtcacaaaatggatgttcaaat 34718125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 36816583 - 36816674
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttca 277  Q
    |||||||||||||||||  ||||| |||||| || || |||||| |||  | |||||| |||||  ||||||||| | |||||||||||||||    
T  36816583 acaaaaatcaaagcaatagagagaaaaagtaaaaagataatgtgagtatgatagagaagattgtcacaaaagttg-tcaaaaatggttgttca 36816674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 280
Target Start/End: Original strand, 34307428 - 34307602
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||||| |||||||||| ||| |||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||||||  |     
T  34307428 gagcaatgttatttgaacaatcctttcttgtgacaacttattggacaaccaaattatacaaagaaatttaggtagtgatacaaaaaccaaagcaatagaa 34307527  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||| |||||||| |||  | ||||||| ||||   |||| |||| ||||||| |||||| ||||    
T  34307528 agagaaagtagaagaacaatgtgagtatgaaagagaaagttgtcataaaaattgtcaaaaaattgttgtttaaat 34307602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 4494123 - 4494298
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| | |||||| ||| ||| | || ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||  |    
T  4494123 agagcaatgttatttgaacaaccatttcttatgacaacttgttggacaaccaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaataga 4494222  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     |||||||||| || ||  ||||| ||| |||||||||| ||||  ||||| || | ||||||| ||| |||||||    
T  4494223 aagagaaagtaaaatgatgatgtgagtataagagagaaagttgtcacaaaaattatcaaaaaatagttattcaaat 4494298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 41443077 - 41443252
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||| ||||||||||||| |||||||||| ||||| || |||||  |||| ||||||||||||||||||| |   |||||||||||| ||||  |    
T  41443077 agagcaatgatatttgaacaatcatttcttgtgacaaccttttggacaactaaattatacaaagaaatttaggtatttgcacaaaaatcaaaacaataga 41443176  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| ||| | |||||| |||  |||||||||||| |  |||||||||| ||||| || | ||||||||    
T  41443177 gagagaaagtaaaagaataatgtgagtatgagagagaaaattatcacaaaagttgtcaaaaagtgatcgttcaaat 41443252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 227
Target Start/End: Complemental strand, 31104849 - 31104727
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||||||||||||||||||  ||||||||||| ||  | || |||||  |||| |||| |||||||||||||||||| |||||||||||| ||||  |    
T  31104849 agagcaatgttatttgaacaactttttcttgtgacaatttgtttgacaactaaattatacgaagaaatttaggtagtgacacaaaaatcaaaacaataga 31104750  T
Q  205 gagagaaagtagaaggacaatgt 227  Q
    |||||||||||||||||||||||    
T  31104749 gagagaaagtagaaggacaatgt 31104727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 32363116 - 32362943
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||| |||||||||||||||| |||||| ||||| ||  |||| ||||| || || ||||||||| ||||||||||||  | ||| ||||||||||  ||    
T  32363116 agagaaatgttatttgaacaaccttttcatgtgacaatttattggacaaccacattatacaaagagatttaggtagtggcataaatatcaaagcaa--ta 32363019  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| ||| |||||||| |||  ||||| ||| ||||   ||||||||| |||||||||||||||||||    
T  32363018 gagagaaagtaaaagaacaatgtgtgtatgagagataaagttgtcataaaagttgtcaaaaaatggttgttcaaat 32362943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 280
Target Start/End: Complemental strand, 9692901 - 9692735
Alignment:
Q  114 ttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaag 213  Q
    |||||||||||| | |||||||||| ||||| ||||||||  |||| ||||||||||| ||||| ||||| |||||||||||||||||  ||||||||||    
T  9692901 ttatttgaacaaccatttcttgtgacaaccttttagacaactaaattatacaaagaaagttaggcagtgacacaaaaatcaaagcaatagagagagaaag 9692802  T
Q  214 tagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    || || || ||||||  ||  ||||||||| || |  ||||| ||| |||||| |||||||| ||||    
T  9692801 taaaatgataatgtgaatatgagagagaaagttatcacaaaaattgataaaaagtggttgtttaaat 9692735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 34456974 - 34456800
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||| ||||||||||||  |||||||||| || || ||||||||  |||| ||||||||||||||||||| ||  |||||||| ||||||||  ||    
T  34456974 gagcaatgatatttgaacaattatttcttgtgacaatcttttagacaactaaattatacaaagaaatttaggtattggcacaaaaattaaagcaatagag 34456875  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||| || || ||| || |||  ||||||||| || |  |||||||||| ||||| ||||| |||||||    
T  34456874 agagaaagtaaaaagataatatgagtatgagagagaaagttatcacaaaagttgtcaaaaagtggttattcaaat 34456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 25188313 - 25188416
Alignment:
Q  108 gcaatgttatttgaacaatcttttctt-gtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtaga 206  Q
    |||||||||||||||||| ||||| || |||| ||||||||||||||  |||||||||||||||||||||||| ||| || ||||||||||||||  |||    
T  25188313 gcaatgttatttgaacaaccttttttttgtgacaacctattagacaactaaataatacaaagaaatttaggtaatgacaccaaaatcaaagcaatagaga 25188412  T
Q  207 gaga 210  Q
    ||||    
T  25188413 gaga 25188416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 25188450 - 25188526
Alignment:
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||| |||||||||||| |||| ||||||||| |||||||||||||||| ||||||| |||||||||||    
T  25188450 agagagaaagtataaggacaatgtgagtaagagagagaaagttgttgcaaaagttgtcaaaaaatagttgttcaaat 25188526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 39099502 - 39099413
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatca 194  Q
    ||||||||||||||||||||||  ||| |||||| ||| | || |||||| |||| |||||||||||||||||||||| |||||||||||    
T  39099502 agagcaatgttatttgaacaattattttttgtgacaacattttggacaattaaattatacaaagaaatttaggtagtggtacaaaaatca 39099413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 27168567 - 27168743
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||| ||||||||||||||||| | ||| || ||| ||| | ||| |||| ||||| ||||||||  |||||  |||||  ||||||||||||| |||      
T  27168567 tagaacaatgttatttgaacaaccctttattatgacaacttcttatacaaccaaattatacaaagggatttaaatagtggcacaaaaatcaaagtaatag 27168666  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| ||||||||| | ||| || |||  ||||||||| ||||  ||||| || |||||||||||||||||||||    
T  27168667 agagaggaagtagaagaataatatgagtatgagagagaaagttgtcacaaaaattattaaaaaatggttgttcaaat 27168743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 228
Target Start/End: Original strand, 39713927 - 39714046
Alignment:
Q  109 caatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagaga 208  Q
    ||||||||||||||||| | ||| |||||||||  | || ||||| ||||| ||||||| || ||||| |||| | |||||||||||||||||  |||||    
T  39713927 caatgttatttgaacaaccattttttgtgataatttgttggacaaccaaattatacaaaaaattttagatagtaacacaaaaatcaaagcaatagagaga 39714026  T
Q  209 gaaagtagaaggacaatgtg 228  Q
    ||||||| ||| ||||||||    
T  39714027 gaaagtataagaacaatgtg 39714046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 280
Target Start/End: Complemental strand, 38671797 - 38671628
Alignment:
Q  110 aatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagag 209  Q
    |||||||||||||||| | ||| |||| ||||| |  || ||||| |||| ||| ||||  |||||| ||||||||||||||| |||| |||  ||| |     
T  38671797 aatgttatttgaacaaccatttattgtaataacttcctatacaattaaattatataaagtgatttagatagtgatacaaaaattaaagtaatagagaaat 38671698  T
Q  210 aaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| ||| |||||||| |||  ||||||||||||||  ||||| ||  ||||||||||||||||||||    
T  38671697 aaagtataagaacaatgtgagtacgagagagaaaattgtcacaaaaatt-ataaaaaatggttgttcaaat 38671628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 254
Target Start/End: Original strand, 33472305 - 33472454
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||| |||||||||| ||||| | ||| || ||| ||| | ||| |||||||||| ||||||||| |||||| |||||||||||||||||||| |||  |    
T  33472305 agagtaatgttatttaaacaaccctttattatgacaacttcttatacaatcaaattatacaaagagatttagatagtgatacaaaaatcaaagtaataga 33472404  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaa 254  Q
     | |||||||| ||| ||||| ||  ||  ||||||||||||||| ||||    
T  33472405 aaaagaaagtaaaagaacaatatgaatatgagagagaaaattgttacaaa 33472454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 277
Target Start/End: Original strand, 34064033 - 34064163
Alignment:
Q  146 ttagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaat 245  Q
    |||||||| ||||| ||||| | ||| ||||||||||||| ||||||||||| |||  ||| |||||||||||  | |||||| |||  ||||| ||| |    
T  34064033 ttagacaaacaaattatacagataaacttaggtagtgatataaaaatcaaagtaatagagaaagaaagtagaaaaataatgtgagtatgagagataaagt 34064132  T
Q  246 tgttgcaaaagttgttaaaaaatggttgttca 277  Q
    |||| |||||||| || |||||||||||||||    
T  34064133 tgttacaaaagttatt-aaaaatggttgttca 34064163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 5114205 - 5114088
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||||||| |||||||||||||||||  |||||||||||| || || |||||| ||   ||||||||| ||||   |||| ||| |    
T  5114205 tacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtgtgagagagaaagttgtcaaaaaaattg-t 5114107  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  5114106 aaaaaatggttgttcaaat 5114088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 280
Target Start/End: Complemental strand, 9862709 - 9862543
Alignment:
Q  114 ttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaag 213  Q
    |||||||||||| ||||| |||||| ||||| |||  ||| ||||| ||||||   | ||||| |||||  ||||||||||||| |||  ||||| |||     
T  9862709 ttatttgaacaaccttttattgtgacaacctcttatgcaaccaaattatacaacatagtttagatagtggcacaaaaatcaaagtaattgagagaaaaaa 9862610  T
Q  214 tagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    || |||||||||||   ||  ||||||||| ||||  |||||||||  |||||||||||||||||||    
T  9862609 taaaaggacaatgttaatatgagagagaaagttgtcacaaaagttgacaaaaaatggttgttcaaat 9862543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 27541446 - 27541563
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||||||||  | ||||||| |    
T  27541446 tacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcactaaagttg-t 27541544  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  27541545 aaaaaatggttgttcaaat 27541563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 32145871 - 32145985
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||||||||||||||| | |||   | || ||| | || || ||| ||||  |||||||||||||||||||||| |||||||||||| ||||      
T  32145871 tagagcaatgttatttgaacaaccatttacggggacaacttgttggataattaaattttacaaagaaatttaggtagtgacacaaaaatcaaaacaatag 32145970  T
Q  204 agagagaaagtagaa 218  Q
    |||||||||||||||    
T  32145971 agagagaaagtagaa 32145985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 38926755 - 38926638
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  |||| |||| |    
T  38926755 tacaaaggaaataaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaacgttg-t 38926657  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  38926656 aaaaaatggttgttcaaat 38926638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 280
Target Start/End: Complemental strand, 29526054 - 29525874
Alignment:
Q  99 tattctagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagc 198  Q
    |||| ||||||||||||||||| |||| | ||| |||||| ||| | || ||||| |||||  |||||| |||||||| |||||  |||||||||||| |    
T  29526054 tattttagagcaatgttatttgtacaaccatttattgtgacaacttgttggacaaccaaattttacaaaaaaatttagatagtggcacaaaaatcaaaac 29525955  T
Q  199 aatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||  |||||| |||||||| ||  ||||  |||  ||||||||| ||||   || | ||||||||| ||||||||||||||    
T  29525954 aatagagagag-aagtagaatgatcatgtaagtatgagagagaaagttgtcataagaattgttaaaagatggttgttcaaat 29525874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 20547934 - 20548051
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  |||||||||||||||||  |||||||||||| || || || ||| |||  ||||||||||||||  ||||||||| |    
T  20547934 tacaaaggaaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaagataacgtgagtatgagagagaaaattgtcacaaaagttg-t 20548032  T
Q  262 aaaaaatggttgttcaaat 280  Q
    ||||| || ||||||||||    
T  20548033 aaaaactgattgttcaaat 20548051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 41505618 - 41505501
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  ||||||||| |    
T  41505618 tacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttg-t 41505520  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||  ||||||||||    
T  41505519 aaaaaataattgttcaaat 41505501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 46624034 - 46623917
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||||||| ||||||| |||| ||||  | |||||||||| || || ||||||  ||  ||||||||| ||||  ||||||||||     
T  46624034 tacaaagaaaatgaggtagtgacacaaaaaccaaaacaatagaaagagaaagtaaaaagataatgtgaatatcagagagaaagttgtcacaaaagttgt- 46623936  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  46623935 aaaaaatggttgttcaaat 46623917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 52254082 - 52254199
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||| |||||||||  |||||||||||| || ||||||| | |||  ||||||||| ||||   |||||||| |    
T  52254082 tacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagacaatgcgagtatgagagagaaagttgtcataaaagttg-t 52254180  T
Q  262 aaaaaatggttgttcaaat 280  Q
    ||| |||||||||||||||    
T  52254181 aaacaatggttgttcaaat 52254199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 7668156 - 7668248
Alignment:
Q  187 aaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| |||||||||  |||||||||||| || || |||||| ||| |||||||||||||||   |||||||| ||||||||| ||||||||||    
T  7668156 aaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtataagagagaaaattgtcaaaaaagttg-taaaaaatgattgttcaaat 7668248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 50314739 - 50314634
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||| ||| ||||||||||||| |||  |||||||||||| ||  | |||||| |||  |||||||||||||| | ||||||| | |||||||| ||||    
T  50314739 aggtattgacacaaaaatcaaagtaatagagagagaaagtaaaaacataatgtgagtatgagagagaaaattgtcgaaaaagttatcaaaaaatgattgt 50314640  T
Q  275 tcaaat 280  Q
    ||||||    
T  50314639 tcaaat 50314634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 48353102 - 48353006
Alignment:
Q  184 tacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||||  |||||||||||| ||  | ||| || |||  ||||||||| ||||  |||||||||||||||||||| ||| |||||    
T  48353102 tacaaaaatcaaagcaatagagagagaaagtaaaaatataatatgagtatgagagagaaagttgtcacaaaagttgttaaaaaatggatgtacaaat 48353006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 10811264 - 10811145
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgt 260  Q
    |||||||||||| |  ||| ||| ||||| | |||||||||  |||||||| ||| ||  |||||||| |||  ||||||||| ||||  ||||||||||    
T  10811264 atacaaagaaatatgagtattgacacaaataccaaagcaatagagagagaaggtaaaaacacaatgtgagtatgagagagaaagttgtcacaaaagttgt 10811165  T
Q  261 taaaaaatggttgttcaaat 280  Q
     | |||||||||||||||||    
T  10811164 cataaaatggttgttcaaat 10811145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 26014916 - 26014822
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||| ||||  |||||||||||| || || |||||| |||  ||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  26014916 acaaaaaccaaaacaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttg-taaaaaatggttgttcaaat 26014822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 280
Target Start/End: Complemental strand, 288837 - 288735
Alignment:
Q  178 tagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttca 277  Q
    |||||| ||||||| |||||||||  |||||||||||| ||  | |||||| |||  ||||||||| ||||  |||||||| | ||||||| ||||||||    
T  288837 tagtgacacaaaaaccaaagcaatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttataaaaaaattgttgttca 288738  T
Q  278 aat 280  Q
    |||    
T  288737 aat 288735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 5244356 - 5244239
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||||||||  |||||||||||| ||  | |||||| |||  ||||||||| ||||  ||||||||| |    
T  5244356 tacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaagttg-t 5244258  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||| ||||||||||||||    
T  5244257 aaaatatggttgttcaaat 5244239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 266
Target Start/End: Original strand, 6178383 - 6178473
Alignment:
Q  176 ggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaa 266  Q
    |||| ||| |||||||||||||||||  |||||||||||| ||  | |||||| |||  ||||||||||||||  |||||||||| |||||    
T  6178383 ggtattgacacaaaaatcaaagcaatagagagagaaagtaaaaacataatgtgagtatgagagagaaaattgtcacaaaagttgtcaaaaa 6178473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 45711383 - 45711500
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | | ||| ||| |||| || |||| ||||  |||||||||||| || || |||||| |||  ||||||||||||||  ||||||||| |    
T  45711383 tacaaagaaaatgaagtattgacacaataaccaaaacaatagagagagaaagtaaaaagataatgtgagtatgagagagaaaattgtcacaaaagttg-t 45711481  T
Q  262 aaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||||    
T  45711482 aaaaaattgttgttcaaat 45711500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 26452693 - 26452778
Alignment:
Q  189 aaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    |||||||||||||  |||||||||||| ||  | |||||| |||  ||||||||| ||||  |||||||||||| |||||||||||    
T  26452693 aaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtaacaaaagttgttagaaaatggttgt 26452778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 31931035 - 31931080
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||    
T  31931035 agagagaaaattgtcacaaaagttgttaaaaaatggatgttcaaat 31931080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 41309244 - 41309191
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagta 215  Q
    |||||||||| | ||||||||| |||||||||||||||||  ||||||||||||    
T  41309244 tacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagagagagaaagta 41309191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 8502833 - 8502929
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagt 257  Q
    ||||||||||||||| ||| ||| | |||||||||||||||  ||||||||||||  |  ||||| || |||| ||||| |||||| || |||||||    
T  8502833 atacaaagaaatttatgtattgagataaaaatcaaagcaatagagagagaaagtaagaacacaatatgagtaagagagataaaattatttcaaaagt 8502929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 52939778 - 52939663
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||||||||  |||||||||||| || ||  ||||| ||  | |||||||| ||||  ||||||||| |    
T  52939778 tacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagatcatgtgagt--atgagagaaagttgtcacaaaagttg-t 52939682  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  52939681 aaaaaatggttgttcaaat 52939663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 20221570 - 20221608
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagca 199  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  20221570 atacaaagaaatgtaggtattgatacaaaaatcaaagca 20221608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 15927611 - 15927656
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| | ||||| |||||||||||||||||||| |||||||||    
T  15927611 agagagagagttgttacaaaagttgttaaaaaatggatgttcaaat 15927656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 24482979 - 24483024
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| |||||||||||||||| | ||||||| |||||||||    
T  24482979 agagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaat 24483024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 36670971 - 36671075
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||  ||||||| |||||||||  ||||| |||||| || || |||||| |||  ||||| ||| ||||  ||||| |||| |||||||||||||    
T  36670971 aggtagtggcacaaaaaccaaagcaatagagagaaaaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaaattgt-aaaaaatggttgt 36671069  T
Q  275 tcaaat 280  Q
    ||||||    
T  36671070 tcaaat 36671075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 37788400 - 37788356
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||    
T  37788400 agagagaaaattgttacaaa-gttgtttaaaaatggttgttcaaat 37788356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 42358595 - 42358695
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||| ||| |||||||||||||||||  ||||| |||||| || || |||||| |||  ||||||||| ||||  ||||| ||| | ||||||||||||    
T  42358595 aggtattgacacaaaaatcaaagcaatagagagataaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaaattg-tcaaaaatggttgt 42358693  T
Q  275 tc 276  Q
    ||    
T  42358694 tc 42358695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 44677500 - 44677545
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||||||||| |  |||||| |||||||||    
T  44677500 agagagaaaattgttgcaaaagttgtcactaaatggatgttcaaat 44677545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 50206986 - 50207031
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||| |||||||||||||||| | ||||||| |||||||||    
T  50206986 agagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaat 50207031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 50559180 - 50559273
Alignment:
Q  187 aaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||| ||||  |||||||||||| ||  | |||||  |||  ||||||||||||||  |||||||||| ||||||| ||||| |||||    
T  50559180 aaaaatcaaaacaatagagagagaaagtaaaaacataatgtaagtatgagagagaaaattgtcacaaaagttgtcaaaaaatagttgtacaaat 50559273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 52963332 - 52963377
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||| ||||||||  |||||||||||||||||||||||| |||||    
T  52963332 agagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaat 52963377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 54099325 - 54099418
Alignment:
Q  187 aaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||  |||||||||||| ||  | ||| || | | |||||||||| ||||  |||||||||||| ||||||| ||| |||||    
T  54099325 aaaaatcaaagcaatagagagagaaagtaaaaatataatatgagcataagagagaaagttgtcacaaaagttgttagaaaatggatgtacaaat 54099418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 3648682 - 3648589
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||| ||||  ||||| |||||| ||  ||||||||  ||  ||||||||||||||  |||||||| | | |||||||||||||||||    
T  3648682 acaaaaatcaaaacaat--agagataaagtaaaaatacaatgtgaatatgagagagaaaattgtcacaaaagttatcataaaatggttgttcaaat 3648589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 42357028 - 42357141
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||| |||||||||  ||||||| |||| || ||  ||||| |||   |||||||| ||||  ||||||||||     
T  42357028 tacaaaggaaatgaggtagtgacacaaaaaccaaagcaat--agagagagagtaaaaagatcatgtgagtat--gagagaaagttgtcacaaaagttgt- 42357122  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  42357123 aaaaaatggttgttcaaat 42357141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 47472414 - 47472339
Alignment:
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||| || || ||| || |||  ||||||||| ||||  |||||||||| |||||||||||||||||||    
T  47472414 agagagaaagtaaaaagataatatgagtatgagagagaaagttgtcacaaaagttgt-aaaaaatggttgttcaaat 47472339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 48405496 - 48405420
Alignment:
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||| ||  | |||||| |||  ||||||||| ||||| |||||||||| | ||||||||||| |||||    
T  48405496 agagagaaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaatggttgtacaaat 48405420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 106 - 248
Target Start/End: Original strand, 8840 - 8982
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||| |||||| ||||| ||| | || ||||| || || ||||||||||||||||||||||| |||||||||||||||||  ||    
T  8840 gagcaatgttatttgaacaaccttttcatgtgacaactttttggacaaccacattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagag 8939  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgt 248  Q
    |||||||||||||| |||||||| |||  ||||||||||||||    
T  8940 agagaaagtagaagaacaatgtgtgtatgagagagaaaattgt 8982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 5739650 - 5739825
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||  | |||||| ||| ||| | || ||||||||||| | | ||||||| ||||||||||| |||||||||||||||||  |    
T  5739650 agagcaatgttatttgaacatccatttcttatgacaacttgttggacaatcaaattaaataaagaaaattaggtagtgacacaaaaatcaaagcaataga 5739749  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     ||||||| |||||||||||| || ||| |||| ||||| ||||  |||||||||||||||||| |||||||||||    
T  5739750 aagagaaattagaaggacaatatgagtataagaaagaaagttgtcacaaaagttgttaaaaaatagttgttcaaat 5739825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 8645492 - 8645319
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||| ||||||||||| | |||||||||| ||||| || |||||  |||| |||||||||||||||||||||||  || |||||||||||||  ||    
T  8645492 gagcaatgatatttgaacaaccatttcttgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtgacgcataaatcaaagcaatagag 8645393  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||| ||||| |||||| |||  ||||||||| ||||  |||||||||| ||||| | |||||||||||    
T  8645392 agagaaagtaaaaggataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagt-gttgttcaaat 8645319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 8505658 - 8505835
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaa-tcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatg 202  Q
    |||||||||| ||||||||||||| |||||||||| ||  | || ||||| | |||| |||||||||||||||||||||  ||||||||||||||||||     
T  8505658 tagagcaatgatatttgaacaatcatttcttgtgacaattttttggacaacttaaattatacaaagaaatttaggtagttgtacaaaaatcaaagcaata 8505757  T
Q  203 tagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     ||||| |||||| ||||| ||||||  ||  ||||||||| ||||  |||||||||| |||||||| ||||||||||    
T  8505758 gagagaaaaagtaaaaggataatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaat 8505835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 33712505 - 33712330
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| |||||  ||| | ||| | || ||||| || || |||||||||||||||||||||   ||||| ||||||||||   |    
T  33712505 agagcaatgttatttgaacaacctttttatgtaacaacttgttggacaaccacattatacaaagaaatttaggtagttgcacaaatatcaaagcaacaga 33712406  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| |||||||| |||  ||||||||| ||||  |||||||||| ||||| |||||||||||||    
T  33712405 gagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaat 33712330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 109 - 280
Target Start/End: Original strand, 18064980 - 18065151
Alignment:
Q  109 caatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagaga 208  Q
    |||||||||||||||||  ||||  ||||| ||| | || ||||| || || ||||||||||||||||||||||  ||||| |||||||||||  |||||    
T  18064980 caatgttatttgaacaacttttttatgtgacaacttgttggacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagagaga 18065079  T
Q  209 gaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| |||||||| |||  ||||| ||| ||||  |||||||||| ||||| || ||||||||||    
T  18065080 gaaagtagaagaacaatgtgtgtatgagagaaaaagttgtcacaaaagttgtcaaaaagtgattgttcaaat 18065151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 280
Target Start/End: Complemental strand, 14910368 - 14910187
Alignment:
Q  97 tatattctagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaa 196  Q
    |||||||  |||||| ||||||||||||| | |||||| ||| ||||| || |||||  |||| ||||||||||||||||||||||| ||||||||||||    
T  14910368 tatattcatgagcaacgttatttgaacaa-catttcttttgagaaccttttggacaactaaattatacaaagaaatttaggtagtgacacaaaaatcaaa 14910270  T
Q  197 gcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||  ||||| ||| || || || |||| | |||  |||||| |||||||  |||||||||| ||||| || ||||||||||    
T  14910269 gcaatagagagataaaatacaatgataatg-gagtatgagagaggaaattgtcacaaaagttgtcaaaaagtgtttgttcaaat 14910187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 11635421 - 11635596
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||| | |||||||||||| | ||| |||||| ||  | ||| |||| ||||| ||||||||| |||||| |||||  ||||||||||||| |||  |    
T  11635421 agagcagtcttatttgaacaaccctttattgtgacaatttcttatacaaccaaattatacaaagagatttagatagtggcacaaaaatcaaagtaataga 11635520  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||| ||||||  |||||||  ||  ||||||||| ||||  |||||||||| |||||||| ||||||||||    
T  11635521 gagagaaaatagaagagcaatgtgaatatgagagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaat 11635596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 1287098 - 1286993
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||||| ||| |||||| ||| | ||| ||||  |||| |||||||  ||||||| |||||| ||||||||||||| |||  |    
T  1287098 agagcaatgttatttgaacaatcctttattgtgacaacttcttatacaactaaattatacaaaagaatttagatagtgacacaaaaatcaaagtaatcga 1286999  T
Q  205 gagaga 210  Q
    ||||||    
T  1286998 gagaga 1286993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 25811805 - 25811899
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  25811805 acaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttg-taaaaaatggttgttcaaat 25811899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 8098554 - 8098656
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| ||||||| |||||||||  |||||||||||| || || |||||| ||  | |||||||| ||||  ||||||||| ||||||||||||||    
T  8098554 aggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagaaaatgtgagt--atgagagaaagttgtcacaaaagttg-taaaaaatggttgt 8098650  T
Q  275 tcaaat 280  Q
    ||||||    
T  8098651 tcaaat 8098656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 280
Target Start/End: Original strand, 22079509 - 22079624
Alignment:
Q  164 caaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaa 263  Q
    |||||||| | | ||| ||| |||||||||||||||||  |||||||||||| ||  | |||||| ||   ||||||||| ||||  ||||||||| |||    
T  22079509 caaagaaaatgatgtattgacacaaaaatcaaagcaatagagagagaaagtaaaaacataatgtgagtgtgagagagaaagttgtcacaaaagttg-taa 22079607  T
Q  264 aaaatggttgttcaaat 280  Q
    |||||||||||||||||    
T  22079608 aaaatggttgttcaaat 22079624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 17551345 - 17551440
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||| ||||  ||||| |||||| ||  | |||||| |||  ||||||||| ||||| |||||||||| |||||||||||||||||||    
T  17551345 acaaaaaccaaaacaatagagagataaagtaaaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcaaaaaatggttgttcaaat 17551440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 17182282 - 17182172
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||||||||||| | ||| || ||| ||| | ||| |||||||||| ||||||||  |||||| |||||  | ||||||||||| |||  ||    
T  17182282 gagcaatgttatttgaacaaccctttattatgacaacttcttatacaatcaaattatacaaagggatttagatagtggcataaaaatcaaagtaatagag 17182183  T
Q  206 agagaaagtag 216  Q
    ||| |||||||    
T  17182182 agaaaaagtag 17182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 2777332 - 2777377
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||    
T  2777332 agagagaaaattgttgcaaaagttgttactaaatggatgttcaaat 2777377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 5080511 - 5080628
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| |||||||  ||||||||  |||||||||||| ||  | |||||| |||  | ||||||| ||||  ||||||||| |    
T  5080511 tacaaaggaaatgaggtagtgacacaaaaactaaagcaatagagagagaaagtaaaaaaataatgtgagtatgaaagagaaagttgtcacaaaagttg-t 5080609  T
Q  262 aaaaaatggttgttcaaat 280  Q
    ||||| |||||||||||||    
T  5080610 aaaaagtggttgttcaaat 5080628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 26595476 - 26595359
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||| ||| ||||||| |||||||||  |||||||||||| ||  | |||||| |||  ||||| |||||||||  |||||||  |    
T  26595476 tacaaagaaaatgaggtattgacacaaaaaccaaagcaatagagagagaaagtaaaaacataatgtgagtatgagagaaaaaattgttataaaagtt-at 26595378  T
Q  262 aaaaaatggttgttcaaat 280  Q
     |||||| |||||||||||    
T  26595377 caaaaatagttgttcaaat 26595359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 1376431 - 1376374
Alignment:
Q  223 aatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| ||| |||||||||| ||||  |||||||||||| ||||||||||| |||||    
T  1376431 aatgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 1376374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 1384179 - 1384122
Alignment:
Q  223 aatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||| ||| |||||||||| ||||  |||||||||||| ||||||||||| |||||    
T  1384179 aatgtgagtataagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaat 1384122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 10375812 - 10375743
Alignment:
Q  133 ttgtgataacctattagacaatcaaata-atacaaagaaatttaggtagtgatacaaaaatcaaagcaat 201  Q
    |||||||||  ||| ||||||||||| | |||||||||||| |||||| ||| |||||||||||| ||||    
T  10375812 ttgtgataatttataagacaatcaaagatatacaaagaaatataggtattgacacaaaaatcaaaacaat 10375743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 11547545 - 11547590
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||||||||| |  |||||| |||||||||    
T  11547545 agagagaaaattgttgcaaaagttgtcattaaatggatgttcaaat 11547590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 20998089 - 20998142
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagta 215  Q
    |||||||||| | ||||| ||||||||||| |||||||||  ||||||||||||    
T  20998089 tacaaagaaaatgaggtattgatacaaaaaccaaagcaatagagagagaaagta 20998142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 3552139 - 3552215
Alignment:
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||| ||  | |||||| ||| || | ||||||| ||  |||||||||||||||||||||||| |||||    
T  3552139 agagagaaagtaaaaatataatgtgagtataaaaaagaaaatagtcacaaaagttgttaaaaaatggttgtacaaat 3552215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 3772484 - 3772444
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagcaat 201  Q
    |||||||||||||||| |||||| |||||||||||| ||||    
T  3772484 atacaaagaaatttagatagtgacacaaaaatcaaatcaat 3772444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 4820454 - 4820410
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaa 279  Q
    ||||||||||||||  |||||||||| |||||||| |||||||||    
T  4820454 agagagaaaattgtcacaaaagttgtcaaaaaatgattgttcaaa 4820410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 8656 - 8482
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    ||||||||||||||||||||   |||||||||| ||| | ||||||||  |||| ||| |||||||||||| | |||| |||||||||||||||||  |     
T  8656 gagcaatgttatttgaacaactatttcttgtgacaacttgttagacaactaaattatataaagaaatttagttggtgacacaaaaatcaaagcaatagaa 8557  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||||||||| |||  ||||||||| ||||   |||| ||||||||||||| ||||||||||    
T  8556 agagaaagtagaaggacaatgtgagtatgagagagaaagttgtcataaaaattgttaaaaaatgattgttcaaat 8482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 48859007 - 48858833
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||| ||||||| | |||||||||| ||||| || |||||  |||| |||||||||||||||| |||||| |||||||||||||||||  ||    
T  48859007 gagcaatgttatatgaacaaccatttcttgtgacaaccttttggacaactaaattatacaaagaaatttagatagtgacacaaaaatcaaagcaatagag 48858908  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||| ||||| || || |||||| |||  ||||||||| ||||  |||||||||| ||||| |||||||||||||    
T  48858907 agaggaagtaaaatgataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaat 48858833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 105 - 278
Target Start/End: Original strand, 40439726 - 40439899
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| |||||  ||||| ||  | || ||||| || || ||||||||||||||||||||||  ||||| |||||||||||  |    
T  40439726 agagcaatgttatttgaacaacctttttatgtgacaatttgttggacaaccacattatacaaagaaatttaggtagtgtcacaaatatcaaagcaataga 40439825  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaa 278  Q
    ||||||||||||||| |||||||| |||  ||||||||| ||||   ||||||||| |||||||||||||||||    
T  40439826 gagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcataaaagttgtcaaaaaatggttgttcaa 40439899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 280
Target Start/End: Original strand, 7918953 - 7919123
Alignment:
Q  110 aatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagag 209  Q
    |||||||||||||||| | |||||||||| ||| | |||||||| ||||| ||||||||||||||||||||||  ||||||||||||| |||  |||||     
T  7918953 aatgttatttgaacaaccctttcttgtgacaacttgttagacaaccaaattatacaaagaaatttaggtagtggcacaaaaatcaaagtaatagagagat 7919052  T
Q  210 aaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||| || |||  ||||||||| ||||  | |||||| | ||||| || ||||||||||    
T  7919053 aaagtagaaggacaatatgagtatgagagagaaagttgtcacgaaagttatcaaaaattgattgttcaaat 7919123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 280
Target Start/End: Complemental strand, 4213257 - 4213082
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| | ||| |||||| ||| | ||| |||| ||||| ||| ||| | |||||| |||||| ||||||||||||| |||  |    
T  4213257 agagcaatgttatttgaacaaccctttattgtgacaacttcttatacaaccaaattatataaaaagatttagatagtgacacaaaaatcaaagtaataga 4213158  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| ||||||| |||||||| |||  ||||||||| ||||  |||||||| | |||||||||||||||||||    
T  4213157 gagagaaggtagaagaacaatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaat 4213082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 47642493 - 47642668
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||||||||||||||| | ||| ||| || ||| | || ||||| ||||| |||||||||||||||| |||||| |||||||| ||||||||  |    
T  47642493 agagcaatgttatttgaacaaccattttttgggacaacttgttggacaaccaaattatacaaagaaatttagatagtgacacaaaaattaaagcaataga 47642592  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     ||||||||||  | || |||||| |||  ||||||||| ||||  |||||||| | |||||||||||||||||||    
T  47642593 aagagaaagtaatatgataatgtgagtatgagagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaat 47642668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 106 - 280
Target Start/End: Original strand, 5771631 - 5771809
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagca----at 201  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||||  |||| ||||||||||||||||||||||  | |||||||||||||    ||    
T  5771631 gagcaatgttatttgaacaatcatttcttgtgacaaccttttagacaactaaattatacaaagaaatttaggtagtggcagaaaaatcaaagcaatagat 5771730  T
Q  202 gtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
      |||||||||||| || || |||||| |||  ||||||||| ||||  ||||| || | ||||| || ||||||||||    
T  5771731 agagagagaaagtaaaatgataatgtgagtatgagagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaat 5771809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 48983554 - 48983729
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||||||||||| | |||| | ||| |||||| ||| | || ||||| |||||  ||||||||||||||| || ||  |||||||||||||||||  |    
T  48983554 agagcaatgttattggtacaaccatttattgtgacaacttgttggacaaccaaattttacaaagaaatttagataatggcacaaaaatcaaagcaataga 48983653  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
     |||||||||||||  |  ||||| |||  ||||||||| ||||  |||||||||| |||||||||||||||||||    
T  48983654 aagagaaagtagaataatcatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaat 48983729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 4858087 - 4857972
Alignment:
Q  113 gttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaa 212  Q
    ||||||||||||| |||||  ||||||||  |||| ||||| || || ||||||||||||||| ||||||  ||||| |||||||||||  |||||||||    
T  4858087 gttatttgaacaacctttttatgtgataatttattggacaaccacattatacaaagaaatttaagtagtggcacaaatatcaaagcaatagagagagaaa 4857988  T
Q  213 gtagaaggacaatgtg 228  Q
    ||||||| ||||||||    
T  4857987 gtagaagaacaatgtg 4857972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 649896 - 649778
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  ||||||||||     
T  649896 tacaaaggaaatgaggtagtgacacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 649797  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  649796 aaaaaatggttgttcaaat 649778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 280
Target Start/End: Complemental strand, 27742795 - 27742627
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||||||||||||||| |||||  ||| | ||| | || |||||  | |  |||||||||||||||||||      ||||||||||||||||      
T  27742795 tagagcaatgttatttgaacaacctttttatgtaacaacttgttggacaacaacactatacaaagaaatttaggta------caaaaatcaaagcaat-- 27742704  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||| ||||||| |||||||| |||  ||||||||| ||||  |||||||||| ||||| |||||||||||||    
T  27742703 agagagaatgtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaaat 27742627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 17082685 - 17082804
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgt 260  Q
    ||||||||||||||||||||||  ||||| ||||||| |||  ||||||||| |||||| | |||||| |||  ||||||||| ||||  ||||||||||    
T  17082685 atacaaagaaatttaggtagtggcacaaatatcaaagtaatagagagagaaaatagaagaataatgtgtgtatgagagagaaagttgtcacaaaagttgt 17082784  T
Q  261 taaaaaatggttgttcaaat 280  Q
     ||||| | |||||||||||    
T  17082785 caaaaagtagttgttcaaat 17082804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 37685443 - 37685341
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| |||||||||||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  ||||||||| ||||||||||||||    
T  37685443 aggtagtgacacaaaaatcaaagcaat--agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttg-taaaaaatggttgt 37685347  T
Q  275 tcaaat 280  Q
    ||||||    
T  37685346 tcaaat 37685341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 37700075 - 37700177
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| |||||||||||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  ||||||||| ||||||||||||||    
T  37700075 aggtagtgacacaaaaatcaaagcaat--agagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaagttg-taaaaaatggttgt 37700171  T
Q  275 tcaaat 280  Q
    ||||||    
T  37700172 tcaaat 37700177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 38878788 - 38878910
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    ||||||||||||||||||||  ||||  ||||| ||| | || |||||  | || ||| ||||||||||||||||||| |||||||||||||||||  |     
T  38878788 gagcaatgttatttgaacaacatttttatgtgacaacttgttggacaactatattatataaagaaatttaggtagtgacacaaaaatcaaagcaatagaa 38878887  T
Q  206 agagaaagtagaaggacaatgtg 228  Q
    ||| |||||||||| ||||||||    
T  38878888 agaaaaagtagaagaacaatgtg 38878910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 35369814 - 35369710
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| |||||||||||||||||  |||||||||||| || ||||||||| |||  ||| ||||| ||||  ||||||||| ||||||||| ||||    
T  35369814 aggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagacaatgtgagtatgagatagaaagttgtcacaaaagttg-taaaaaatgattgt 35369716  T
Q  275 tcaaat 280  Q
    ||||||    
T  35369715 tcaaat 35369710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 33100922 - 33100818
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| |||||||||||| ||||  |||||||||||| || || |||||| |||  ||||||||| ||||   |||||||| ||||||||||||||    
T  33100922 aggtagtgacacaaaaatcaaaacaatagagagagaaagtaaaaagataatgtgagtatgagagagaaagttgtcaaaaaagttg-taaaaaatggttgt 33100824  T
Q  275 tcaaat 280  Q
    ||||||    
T  33100823 tcaaat 33100818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 8350142 - 8350257
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||| ||||||| |||||||||  |||||||||||| || ||  ||||| |||  ||||||||| ||||  ||||||||| |    
T  8350142 tacaaaggaaataaggtagtgacacaaaaaccaaagcaat--agagagaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttg-t 8350238  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  8350239 aaaaaatggttgttcaaat 8350257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 42468777 - 42468667
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||| ||||||||||| | |||||||||| ||  | || |||||  || | ||||||||||||||||||||||| |||||||| ||| ||||  |    
T  42468777 agagcaatgatatttgaacaaccatttcttgtgacaatttgttggacaactaacttatacaaagaaatttaggtagtgacacaaaaattaaaacaataaa 42468678  T
Q  205 gagagaaagta 215  Q
    |||| ||||||    
T  42468677 gagataaagta 42468667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 9566918 - 9567022
Alignment:
Q  176 ggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgtt 275  Q
    |||| ||| ||||||| |||||||||  || ||||||||| ||  | |||||| |||  ||||||||| ||||  |||||||||| ||||||||||||||    
T  9566918 ggtattgacacaaaaaccaaagcaatagagtgagaaagtaaaaacataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgtt 9567017  T
Q  276 caaat 280  Q
    |||||    
T  9567018 caaat 9567022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 9988056 - 9987961
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||  |||||||||||| ||  | |||||| |||  | ||||||| ||||  |||||||||| ||||| |||||||||||||    
T  9988056 acaaaaatcaaagcaatagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaagttgtcaaaaattggttgttcaaat 9987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 246
Target Start/End: Complemental strand, 23332443 - 23332313
Alignment:
Q  116 atttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagta 215  Q
    |||||||||| |||||  ||||||||  | || ||||| || || ||||||||||||||||||||| | ||||| |||||||||||  ||||  ||||||    
T  23332443 atttgaacaacctttttatgtgataatttgttggacaaccacattatacaaagaaatttaggtagtaacacaaatatcaaagcaatagagagtaaaagta 23332344  T
Q  216 gaaggacaatgtgggtaaaagagagaaaatt 246  Q
     ||  |||||||| |||  ||| ||||||||    
T  23332343 aaaaaacaatgtgtgtatgagaaagaaaatt 23332313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 35529323 - 35529441
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||||||||||||||  | ||||| ||| |||||| |||||||||||| || || |||||| ||   ||||| ||| ||||  ||||||||||     
T  35529323 tacaaagaaatttaggtagtggcataaaaaccaacgcaatggagagagaaagtaaaaagagaatgtgagtttgagagaaaaagttgtcacaaaagttgtc 35529422  T
Q  262 aaaaaatggttgttcaaat 280  Q
     ||||  ||||||||||||    
T  35529423 taaaatcggttgttcaaat 35529441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 19947711 - 19947802
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||  |||||||||||| ||| | |||||  ||||  |||||||| ||||  |||||||||| |||||||||||||||||||    
T  19947711 acaaaaaccaaagcaat--agagagaaagtaaaagcataatgtaagtaa--gagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaat 19947802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 29359741 - 29359649
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||| ||||||||  ||||||||| ||||||||||    
T  29359741 acaaaaaccaaagcaat--agagagaaagtaaaaagataatgtgagtatgagagagaaagttgttacaaaagtt-ataaaaaatgattgttcaaat 29359649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 280
Target Start/End: Original strand, 36577382 - 36577473
Alignment:
Q  188 aaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||  ||||| |||||| || |  |||||| |||  ||||||||| |||||||||||||||| | ||||||| |||||||||    
T  36577382 aaaatcaaagcaataaagagataaagtaaaaagt-aatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaatggatgttcaaat 36577473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 44519118 - 44519209
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttca 277  Q
    |||||||||||||||||  |||||||||||| || || |||||  ||| |||||||||| ||||   |||||||| | |||||||||||||||    
T  44519118 acaaaaatcaaagcaatagagagagaaagtaaaaagataatgtaagtataagagagaaagttgtcataaaagttg-tcaaaaatggttgttca 44519209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 15083017 - 15083111
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||  |||||||||||| || || || ||  |||  ||||||||||||||  ||||||||| | ||||||||||||||||||    
T  15083017 acaaaaaccaaagcaatagagagagaaagtaaaaagataaagtaagtatgagagagaaaattgtcacaaaagttg-tcaaaaatggttgttcaaat 15083111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 21433375 - 21433462
Alignment:
Q  193 caaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||  ||||||||| || ||  | |||||| ||| |||||||||| ||||  |||||||||||| ||||||||||| |||||    
T  21433375 caaagcaatagagagagaaaataaaaacataatgtgagtataagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaat 21433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 35136948 - 35136854
Alignment:
Q  185 acaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    |||||||||||||||||  ||||| |||||| || |  |||||| |||  ||| ||||| |||||||||||||||| | ||||||| |||||||||    
T  35136948 acaaaaatcaaagcaatagagagataaagtaaaaagt-aatgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaatggatgttcaaat 35136854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 280
Target Start/End: Complemental strand, 2571761 - 2571645
Alignment:
Q  163 acaaagaaatttaggtagtgatacaaaaat-caaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||||| | ||||||||| |||||||| |||| ||||  ||||| |||||| ||||| ||||||  ||  ||||||||  ||||  ||||||||||     
T  2571761 acaaagaaaatgaggtagtgacacaaaaatacaaaacaatagagagaaaaagtaaaaggataatgtgactatgagagagaag-ttgtcacaaaagttgt- 2571664  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  2571663 aaaaaatggttgttcaaat 2571645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 27465001 - 27465118
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||||||||  ||||| |||||| || ||  ||||| |||  ||||||||| ||||  ||||||||||     
T  27465001 tacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagacaaagtaaaaagatcatgtgagtatgagagagaaagttgtcacaaaagttgt- 27465099  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||| ||||    
T  27465100 aaaaaatggttgtttaaat 27465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 31088308 - 31088191
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||| ||| | ||||||||  ||||||| |||||||||  |||||||||||| || || |||||| |||  ||||| ||| || |  ||||||||  |    
T  31088308 tacaaaaaaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagtatgagagaaaaagttatcacaaaagtt-at 31088210  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||||||||||||||    
T  31088209 aaaaaatggttgttcaaat 31088191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 41070951 - 41070897
Alignment:
Q  161 atacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagta 215  Q
    ||||||||||||||||||| ||| | |||||||||||||||  | ||||||||||    
T  41070951 atacaaagaaatttaggtattgacataaaaatcaaagcaatagatagagaaagta 41070897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 26837507 - 26837462
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||||||||||||||  || ||| |||||||||    
T  26837507 agagagaaaattgttgcaaaagttgttactaagtggatgttcaaat 26837462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 29586048 - 29586003
Alignment:
Q  235 agagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||||||||||||||||  |||| | |||||||||    
T  29586048 agagagaaaattgttgcaaaagttgttattaaatagatgttcaaat 29586003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 37274990 - 37275094
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||||||| ||||||| |||||||||  ||| |||||||| || || |||||| |||  | ||||||| || |  |||||||| | |||||||||||||    
T  37274990 aggtagtgacacaaaaaccaaagcaatagagaaagaaagtaaaaagataatgtgagtatgaaagagaaagttatcacaaaagttat-aaaaaatggttgt 37275088  T
Q  275 tcaaat 280  Q
    ||||||    
T  37275089 tcaaat 37275094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 45333838 - 45333785
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagta 215  Q
    ||||||| || | ||||||||| |||||||||||||||||  ||||||||||||    
T  45333838 tacaaaggaaatgaggtagtgacacaaaaatcaaagcaataaagagagaaagta 45333785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 49020388 - 49020465
Alignment:
Q  203 tagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| | ||  | |||||| |||  ||||| ||||||||  |||||||||||||||||||||||| |||||    
T  49020388 tagagagaaagaaaaaatataatgtgagtatgagagaaaaaattgtcacaaaagttgttaaaaaatggttgtacaaat 49020465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 52437622 - 52437510
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||| ||| ||| ||| |||||| ||||||||||||||  | ||| |||||| ||  | |||||| |||  ||||||||| ||||  ||||| || ||    
T  52437622 tacaaataaaattatgtattgatacgaaaatcaaagcaatagaaagataaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaaattatt 52437523  T
Q  262 aaaaaatggttgt 274  Q
    |||||||||||||    
T  52437522 aaaaaatggttgt 52437510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 280
Target Start/End: Original strand, 6406 - 6581
Alignment:
Q  105 agagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    ||||||||| ||||||||||| ||||| |||| | ||| | ||| |||| ||||  ||||||||  |||||| |||||| ||||||||||||| |||  |    
T  6406 agagcaatgctatttgaacaaccttttattgttacaacttcttatacaaccaaactatacaaagggatttagatagtgacacaaaaatcaaagtaataga 6505  T
Q  205 gagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||||||| |||||||| |||  ||||| ||| ||||  ||||||||||||||||||| ||||||||||    
T  6506 gagagaaagtagaagaacaatgtgagtatgagagataaagttgtcacaaaagttgttaaaaaatgattgttcaaat 6581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 278
Target Start/End: Complemental strand, 11120 - 10948
Alignment:
Q  104 tagagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgt 203  Q
    |||||||||||||||||||||| | |||||| ||| ||||| || |||||  |||| |||||||||||||||| |||||  ||||||||||||||||  |    
T  11120 tagagcaatgttatttgaacaaccctttcttttgaaaaccttttcgacaactaaattatacaaagaaatttagttagtggcacaaaaatcaaagcaa--t 11023  T
Q  204 agagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaa 278  Q
    ||||||| |||| || || |||||| |||  ||||||||| ||||  |||||||||| ||||| |||||||||||    
T  11022 agagagagagtaaaatgataatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaagtggttgttcaa 10948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 277
Target Start/End: Original strand, 101790 - 101964
Alignment:
Q  108 gcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaat------ 201  Q
    ||||||||||||| |||| | |||||||||| ||| | || ||||| ||||| ||||||||||||||||||||||| | |||||||||||||||          
T  101790 gcaatgttatttgcacaaccctttcttgtgacaacttgtt-gacaaccaaattatacaaagaaatttaggtagtgacataaaaatcaaagcaatagagag 101888  T
Q  202 gtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttca 277  Q
      ||||||||| ||||||||||||||| |||  ||||||||| ||||  |||||||||| ||||||||||||||||    
T  101889 agagagagaaaatagaaggacaatgtgagtatgagagagaaagttgtcacaaaagttgtcaaaaaatggttgttca 101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 261
Target Start/End: Complemental strand, 1828 - 1673
Alignment:
Q  106 gagcaatgttatttgaacaatcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtag 205  Q
    |||||||||||| ||||||| | ||||||| || ||||| || |||||  |||| |||||||||||||||| |||||  |||||||||||||||||  ||    
T  1828 gagcaatgttatgtgaacaaccatttcttgcgacaaccttttggacaactaaattatacaaagaaatttagatagtggcacaaaaatcaaagcaataaag 1729  T
Q  206 agagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| || || |||| | |||  ||||||||||||||  |||||||||||    
T  1728 agagaaagtaaaatgataatgagagtatgagagagaaaattgtcacaaaagttgtt 1673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 13444 - 13563
Alignment:
Q  106 gagcaatgttatttgaacaa-tcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||||||||||| ||||| |||||| |||||| ||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||| ||| |||  |    
T  13444 gagcaatgttatttaaacaactctttt-ttgtgacaacttattggacaactaaattatacaaagaaatttaggcagtgatacaaaaatcgaagtaataga 13542  T
Q  205 gagagaaagtagaaggacaat 225  Q
     ||||||||||||| ||||||    
T  13543 aagagaaagtagaaagacaat 13563  T

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Target: scaffold0184; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 16732 - 16849
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||| || ||||||||  ||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  |||| ||||||    
T  16732 tacaaagaaaatgaggtattggtacaaaaactaaagcaata-agagagaaagtataaagataatgtgagtatgagagagaaagttgtcacaaatgttgtt 16830  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||| ||||||||||    
T  16831 aaaaaatgattgttcaaat 16849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 59400 - 59281
Alignment:
Q  106 gagcaatgttatttgaacaa-tcttttcttgtgataacctattagacaatcaaataatacaaagaaatttaggtagtgatacaaaaatcaaagcaatgta 204  Q
    |||||||||||||| ||||| |||||| |||||| ||| |||| |||||  |||| ||||||||||||||||| ||||||||||||||| ||| |||  |    
T  59400 gagcaatgttatttaaacaactctttt-ttgtgacaacttattggacaactaaattatacaaagaaatttaggcagtgatacaaaaatcgaagtaataga 59302  T
Q  205 gagagaaagtagaaggacaat 225  Q
     ||||||||||||| ||||||    
T  59301 aagagaaagtagaaagacaat 59281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 56112 - 55995
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    |||||||||| | ||||| || ||||||||  ||||||||  |||||||||||| || || |||||| |||  ||||||||| ||||  |||| ||||||    
T  56112 tacaaagaaaatgaggtattggtacaaaaactaaagcaata-agagagaaagtataaagataatgtgagtatgagagagaaagttgtcacaaatgttgtt 56014  T
Q  262 aaaaaatggttgttcaaat 280  Q
    |||||||| ||||||||||    
T  56013 aaaaaatgattgttcaaat 55995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 28295 - 28388
Alignment:
Q  187 aaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgttcaaat 280  Q
    ||||||||||| |||  |||||||||||||||| |||||||| |||  ||||||||| ||||  |||||||| | ||||| |||||||||||||    
T  28295 aaaaatcaaagtaatagagagagaaagtagaagaacaatgtgtgtatgagagagaaagttgtcacaaaagttatcaaaaagtggttgttcaaat 28388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 76563 - 76680
Alignment:
Q  162 tacaaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgtt 261  Q
    ||||||| || | ||||||||  ||||||| |||||||||  |||||||||||  || || ||||||||||  ||||||||| ||||  ||||| ||  |    
T  76563 tacaaaggaaatgaggtagtggcacaaaaaccaaagcaatagagagagaaagtgaaaagataatgtgggtatgagagagaaagttgtcacaaaaatt-at 76661  T
Q  262 aaaaaatggttgttcaaat 280  Q
    ||||||| |||||||||||    
T  76662 aaaaaatagttgttcaaat 76680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 121738 - 121657
Alignment:
Q  187 aaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaat 268  Q
    |||||| |||| |||| ||| |||||||| ||  | |||||| |||  ||||| ||||||||| ||||||||||||||||||    
T  121738 aaaaattaaagtaatggagaaagaaagtaaaaatataatgtgagtatgagagaaaaaattgttacaaaagttgttaaaaaat 121657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 469594 - 469699
Alignment:
Q  175 aggtagtgatacaaaaatcaaagcaatgtagagagaaagtagaaggacaatgtgggtaaaagagagaaaattgttgcaaaagttgttaaaaaatggttgt 274  Q
    ||||| ||||||||||||||||| |||| ||||||||||||  |  | |||||| ||   ||||||||| ||||  ||||| || | |||||||||||||    
T  469594 aggtattgatacaaaaatcaaagtaatggagagagaaagtaataacataatgtgagtgtgagagagaaagttgtcacaaaaattatcaaaaaatggttgt 469693  T
Q  275 tcaaat 280  Q
     |||||    
T  469694 acaaat 469699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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