View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16702_high_6 (Length: 576)
Name: NF16702_high_6
Description: NF16702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16702_high_6 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 531; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 531; E-Value: 0
Query Start/End: Original strand, 1 - 566
Target Start/End: Complemental strand, 36314888 - 36314320
Alignment:
| Q |
1 |
attggtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
36314888 |
attggtttcatggttgactcctttgctacaaacgtcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcgggaaa |
36314789 |
T |
|
| Q |
101 |
gtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314788 |
gtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccagtgaatgttcaacatatgtatcagtacattattgtttctaacaaga |
36314689 |
T |
|
| Q |
201 |
atgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctag |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
36314688 |
atgaagattctttcgcttttgaagttaaagatgggaagtttatatgatgggagctatcctcgaagggcaagttaacaagtggtgttgaagacaatgctag |
36314589 |
T |
|
| Q |
301 |
tggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtt |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314588 |
tggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtt |
36314489 |
T |
|
| Q |
401 |
tttcagaaaaaggtgggaacacc---aagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgtt |
497 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314488 |
tttcagaaaaaggtgggaacaccaaaaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgtt |
36314389 |
T |
|
| Q |
498 |
ggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcat |
566 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314388 |
ggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcat |
36314320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 30)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 566
Target Start/End: Complemental strand, 19504294 - 19503747
Alignment:
| Q |
1 |
attggtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaa |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||||| |||||||||||| ||||||||||||| || ||||||||||||| | ||| |||||||| |
|
|
| T |
19504294 |
attggtttcatggttgactccttcgctaccaactccaggtaaatttagtcttgtatgggaaccaaaagaacgtgaattgaacataaggaaaagcggcaaa |
19504195 |
T |
|
| Q |
101 |
gtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaaga |
200 |
Q |
| |
|
||| |||||||||| ||||||||||||||||||||||| |||||||||||||| | || ||||||| ||| ||||||||||||||||| |||||||||| |
|
|
| T |
19504194 |
gtgcattggaaaagcggaaaacttaaaagcaatggaatattcgagaacattcccacaaaagttcaacgtatatatcagtacattattgtctctaacaaga |
19504095 |
T |
|
| Q |
201 |
atgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctag |
300 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| ||||||| | ||| |||||||||| | |||| | ||| |||| |
|
|
| T |
19504094 |
atgaagattctttcgctttcgaagttaaagatgggaagtttgcacgatggcaactaacctcgaaggggaggttagta---ggtcatga------------ |
19504010 |
T |
|
| Q |
301 |
tggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtt |
400 |
Q |
| |
|
|||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |
|
|
| T |
19504009 |
tggagagattgggaatgcagatatgtgttatggatataatagcaatggagggtgccaaaaatgggaggaaataccaaattgtagggaaaatggtgaggtt |
19503910 |
T |
|
| Q |
401 |
tttcagaaaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttgga |
500 |
Q |
| |
|
|||||||||| | |||||||||| || | ||||||||| || | | |||| | |||| | |||| ||||||||||||||||||| |||||||||| |
|
|
| T |
19503909 |
tttcagaaaattgcgggaacacca---aacgtagacaatgcaacaacgtttgaacaggatgtgacttatagttacagtgattgcaagattagatgttgga |
19503813 |
T |
|
| Q |
501 |
gaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcat |
566 |
Q |
| |
|
||||||||| ||||||||||||| ||||| |||| |||| |||||||||| |||||||||||| |
|
|
| T |
19503812 |
gaaattgtaattgcaatggattccaggaattttatggtaatgggactggatgtatattctattcat |
19503747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 566
Target Start/End: Original strand, 19345049 - 19345596
Alignment:
| Q |
1 |
attggtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaa |
100 |
Q |
| |
|
||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| | |
|
|
| T |
19345049 |
attggtttcatggatgactccttcgctaccaactccaggtgaatttagtcttgaatgggaaccaaaagaaggtgaattgaacatcaagaaaagcggcata |
19345148 |
T |
|
| Q |
101 |
gtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaaga |
200 |
Q |
| |
|
| |||||||||||| ||||||||||| ||||||||||| |||||||||||||| | ||| ||||||| ||| ||||||||||||||||| |||||||||| |
|
|
| T |
19345149 |
gcgtattggaaaagcggaaaacttaatagcaatggaatattcgagaacattcccacgaaagttcaacgtatatatcagtacattattgtctctaacaaga |
19345248 |
T |
|
| Q |
201 |
atgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctag |
300 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| ||||||| | ||| ||||||| || | |||| | ||| |||| |
|
|
| T |
19345249 |
atgaagattctttcgctttcgaagttaaagatgggaagtttgcacgatggcaactaacctcgaacgggaggttagta---ggtcatga------------ |
19345333 |
T |
|
| Q |
301 |
tggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtt |
400 |
Q |
| |
|
|||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| |
|
|
| T |
19345334 |
tggagatattgggaatgcagatatgtgttatggatataatagcaatggagggtgccaaaaatgggaggaaataccaaattgtagggaaaatggtgaggtt |
19345433 |
T |
|
| Q |
401 |
tttcagaaaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttgga |
500 |
Q |
| |
|
|||||||||| |||||||||||||| | | ||| ||| | || | ||||| |||| | |||| ||||||||||||||||||| |||||||||| |
|
|
| T |
19345434 |
tttcagaaaatggtgggaacaccaacc---ttagactatgaaacagtgtttgaattcgatgtgacttatagttacagtgattgcaagattagatgttgga |
19345530 |
T |
|
| Q |
501 |
gaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcat |
566 |
Q |
| |
|
|||||||| ||||||||||||| ||||| |||| |||| |||||||||| ||||||||||| |
|
|
| T |
19345531 |
gaaattgttattgcaatggattccaggaattttatggtaatgggactggatgtacattctattcat |
19345596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 42 - 523
Target Start/End: Original strand, 19410701 - 19411164
Alignment:
| Q |
42 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
141 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19410701 |
aatttaatcttgaatgggaaccaaaacaaggtgaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19410800 |
T |
|
| Q |
142 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
241 |
Q |
| |
|
|||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19410801 |
cgagaatattccggccaatgttcaaagtaggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19410900 |
T |
|
| Q |
242 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
341 |
Q |
| |
|
|| |||||| |||||||||||||| |||||| | |||||||| |||| | |||| ||||||||||| ||||| |||||||||| |
|
|
| T |
19410901 |
gcacaatgggaactatcctcgaaggggaagttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggatataata |
19410985 |
T |
|
| Q |
342 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatgc |
441 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| ||||||| || |||||| | |
|
|
| T |
19410986 |
gtgatggagggtgccaaaaatgggaggatataccaacttgcagggaacctggtgagatgtttcagaaaaaggcgggaagaccaagc---atagacaattc |
19411082 |
T |
|
| Q |
442 |
atcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattc |
523 |
Q |
| |
|
| || ||||||||| | || | |||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
19411083 |
aacaacatatgaattcgacgtgacttatagttacagtgattgcaagatcagatgttggaaaaattgtagttgcaatggattc |
19411164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 399
Target Start/End: Original strand, 19390473 - 19390864
Alignment:
| Q |
11 |
tggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattgga |
110 |
Q |
| |
|
|||||| || ||| ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19390473 |
tggttggcttcttcgctaccaactccaggtgaatttagtcttgaatgggaaccaaaacaaggggaattgaacatcaagaaacgcggcaaagtgtattgga |
19390572 |
T |
|
| Q |
111 |
aaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattc |
210 |
Q |
| |
|
|||| |||||||||||||||||||| | |||||||||||||| |||||||||||| ||| ||||| ||||||||||| ||||||||| |||||||||| |
|
|
| T |
19390573 |
aaagcggaaaacttaaaagcaatggtttattcgagaacattccggtgaatgttcaacgtatatatcaatacattattgtctctaacaaggatgaagattc |
19390672 |
T |
|
| Q |
211 |
tttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcgaagggcaagttaacaagtggtgatga---agacaatgctagtggagaa |
307 |
Q |
| |
|
||| ||||| |||||||||||||||||||||||||||||| | |||||||||| | ||||| ||||| |||||| ||| | | ||||| ||| |
|
|
| T |
19390673 |
ttttgctttcgaagttaaagatgggaagtttatacgatggttcattacctcgaaggggaggttaataagtgctgatgagggagagatttatagtgcagac |
19390772 |
T |
|
| Q |
308 |
attggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggt |
399 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
19390773 |
attgctaatgcagataagtgttatggatataatagtgatgccgggtgccaaaaatgggaggatataccaacttgcagggaccctcgtgaggt |
19390864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 42 - 428
Target Start/End: Original strand, 19457720 - 19458091
Alignment:
| Q |
42 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
141 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19457720 |
aatttaatcttgaatgggaaccaaaacaaggtgaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19457819 |
T |
|
| Q |
142 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
241 |
Q |
| |
|
|||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19457820 |
cgagaatattccggccaatgttcaaagtaggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19457919 |
T |
|
| Q |
242 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
341 |
Q |
| |
|
|| |||||| |||||||||||||| |||||| | |||||||| |||| | |||| ||||||||||| ||||| |||||||||| |
|
|
| T |
19457920 |
gcacaatgggaactatcctcgaaggggaagttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggatataata |
19458004 |
T |
|
| Q |
342 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagca |
428 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| |||||||| |
|
|
| T |
19458005 |
gtgatggagggtgccaaaaatgggaggatataccaacttgcagggaacctggtgagatgtttcagaaaaaggcgggaagaccaagca |
19458091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 42 - 428
Target Start/End: Complemental strand, 19523358 - 19522987
Alignment:
| Q |
42 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
141 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19523358 |
aatttaatcttgaatgggaaccaaaacaaggtgaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19523259 |
T |
|
| Q |
142 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
241 |
Q |
| |
|
|||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19523258 |
cgagaatattccggccaatgttcaaagtaggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19523159 |
T |
|
| Q |
242 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
341 |
Q |
| |
|
|| |||||| |||||||||||||| |||||| | |||||||| |||| | |||| ||||||||||| ||||| |||||||||| |
|
|
| T |
19523158 |
gcacaatgggaactatcctcgaaggggaagttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggatataata |
19523074 |
T |
|
| Q |
342 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagca |
428 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| |||||||| |
|
|
| T |
19523073 |
gtgatggagggtgccaaaaatgggaggatataccaacttgcagggaacctggtgagatgtttcagaaaaaggcgggaagaccaagca |
19522987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 42 - 566
Target Start/End: Original strand, 19592051 - 19592554
Alignment:
| Q |
42 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
141 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19592051 |
aatttaatcttgaatggggaccaaaagaaggagaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19592150 |
T |
|
| Q |
142 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
241 |
Q |
| |
|
|||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19592151 |
cgagaatattccggccaatgttcaaaataggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19592250 |
T |
|
| Q |
242 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
341 |
Q |
| |
|
|| |||||| ||| |||||| || | |||| | |||||||| |||| | |||| ||||||||||| ||||| |||| ||| |
|
|
| T |
19592251 |
gcacaatgggaactaatctcgaaagggaggttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggat---ata |
19592332 |
T |
|
| Q |
342 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatgc |
441 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| || | |||||||| |
|
|
| T |
19592333 |
gtgatggaggatgccaaaaatgggaggatataccaacttgcagggaacctggtgaggtttttcagaaaaaggcgggaacacca---aacgtagacaatgc |
19592429 |
T |
|
| Q |
442 |
atcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataat |
541 |
Q |
| |
|
| || | | |||| | |||| | |||| ||||||||||||||||||| ||||||||||||||||||| ||||| || |||| ||||| ||||||||| |
|
|
| T |
19592430 |
aacaacgtttgaacaggatgtgacttatagttacagtgattgcaagattagatgttggagaaattgtaattgcagtgcattccaagaatattatgataat |
19592529 |
T |
|
| Q |
542 |
ttgactggatgtgtattctattcat |
566 |
Q |
| |
|
|||||||||||||||| |||||| |
|
|
| T |
19592530 |
gggactggatgtgtattccattcat |
19592554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 42 - 566
Target Start/End: Complemental strand, 19469723 - 19469220
Alignment:
| Q |
42 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
141 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19469723 |
aatttaatcttgaatggggaccaaaagaaggagaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19469624 |
T |
|
| Q |
142 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
241 |
Q |
| |
|
|||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19469623 |
cgagaatattccggccaatgttcaaaataggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19469524 |
T |
|
| Q |
242 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
341 |
Q |
| |
|
|| |||||| ||| |||||| || | |||| | |||||||| |||| | |||| ||||||||||| ||||| |||| ||| |
|
|
| T |
19469523 |
gcacaatgggaactaatctcgaaagggaggttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggat---ata |
19469442 |
T |
|
| Q |
342 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatgc |
441 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||| || |||||| | |
|
|
| T |
19469441 |
gtgatggaggatgccaaaaatgggaggatataccaacttgcagggaacctggtgaggtgtttcagaaaaaggcgggaagaccaagc---attgacaattc |
19469345 |
T |
|
| Q |
442 |
atcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataat |
541 |
Q |
| |
|
| || | | |||| | |||| | |||| |||||||||||||||||||||||||||||| |||||||| ||||| || |||| ||||| ||||||||| |
|
|
| T |
19469344 |
aacaacgtttgaagaggatgtgacttatagttacagtgattgcaagatgagatgttggaaaaattgtaattgcagtgcattccaagaatattatgataat |
19469245 |
T |
|
| Q |
542 |
ttgactggatgtgtattctattcat |
566 |
Q |
| |
|
|||||||||||||||| |||||| |
|
|
| T |
19469244 |
gggactggatgtgtattccattcat |
19469220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 42 - 566
Target Start/End: Complemental strand, 19540647 - 19540144
Alignment:
| Q |
42 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgtt |
141 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | || |
|
|
| T |
19540647 |
aatttaatcttgaatggggaccaaaagaaggagaattgaacatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattatt |
19540548 |
T |
|
| Q |
142 |
cgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagttt |
241 |
Q |
| |
|
|||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
19540547 |
cgagaatattccggccaatgttcaaaataggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagttt |
19540448 |
T |
|
| Q |
242 |
atacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataata |
341 |
Q |
| |
|
|| |||||| ||| |||||| || | |||| | |||||||| |||| | |||| ||||||||||| ||||| |||| ||| |
|
|
| T |
19540447 |
gcacaatgggaactaatctcgaaagggaggttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggat---ata |
19540366 |
T |
|
| Q |
342 |
gcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatgc |
441 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||| || |||||| | |
|
|
| T |
19540365 |
gtgatggaggatgccaaaaatgggaggatataccaacttgcagggaacctggtgaggtgtttcagaaaaaggcgggaagaccaagc---attgacaattc |
19540269 |
T |
|
| Q |
442 |
atcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataat |
541 |
Q |
| |
|
| || | | |||| | |||| | |||| |||||||||||||||||||||||||||||| |||||||| ||||| || |||| ||||| ||||||||| |
|
|
| T |
19540268 |
aacaacgtttgaagaggatgtgacttatagttacagtgattgcaagatgagatgttggaaaaattgtaattgcagtgcattccaagaatattatgataat |
19540169 |
T |
|
| Q |
542 |
ttgactggatgtgtattctattcat |
566 |
Q |
| |
|
|||||||||||||||| |||||| |
|
|
| T |
19540168 |
gggactggatgtgtattccattcat |
19540144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 19337333 - 19337582
Alignment:
| Q |
1 |
attggtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaa |
100 |
Q |
| |
|
|||||||||| ||||| ||| || ||||| |||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| | |||||| |
|
|
| T |
19337333 |
attggtttcacggttggctcattcgctaccaactccaggtgaacttagtcttgaatgggaaccaaaagaaggtgaattgaacatcaggaaaagtggcaaa |
19337432 |
T |
|
| Q |
101 |
gtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaaga |
200 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||| || |||||||||||||| ||||||||| |
|
|
| T |
19337433 |
gtgcattggaaaagtggaaaactcaaaagcaatggaatgttcgagaacattcctgcgaaagttcaacgtatataccagtacattattgtgtctaacaagg |
19337532 |
T |
|
| Q |
201 |
atgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgg |
250 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19337533 |
atgaagattcttttgcttttgaagttaaagatgggaaatttatacgatgg |
19337582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 19355353 - 19355602
Alignment:
| Q |
1 |
attggtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaa |
100 |
Q |
| |
|
|||||||||| ||||| ||| || || || ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| |||||||| |
|
|
| T |
19355353 |
attggtttcacggttggctcattcgcgaccaacttcaggtgaatttagtcttgaatgggaaccaaaagaaggtgaattgaacataaggaaaagcggcaaa |
19355452 |
T |
|
| Q |
101 |
gtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaaga |
200 |
Q |
| |
|
||| |||||||||| |||||||||| ||| |||||||| ||||||||||||||| ||| |||||| ||| |||| |||||||||||| ||||||||| |
|
|
| T |
19355453 |
gtgcattggaaaagcggaaaacttagaagtaatggaatattcgagaacattccagcgaaagttcaaagtatatatcggtacattattgtgtctaacaagg |
19355552 |
T |
|
| Q |
201 |
atgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgg |
250 |
Q |
| |
|
||||||||||||| ||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
19355553 |
atgaagattcttttgctttcgaagttaatgatgggaattttatacgatgg |
19355602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 19468795 - 19468610
Alignment:
| Q |
34 |
ttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaat |
133 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
19468795 |
ttcaggtgaatttaatctagattgggaaccaaaacaaggtgaattgatcatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaat |
19468696 |
T |
|
| Q |
134 |
ggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttt |
219 |
Q |
| |
|
||| | |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||| |
|
|
| T |
19468695 |
ggattattcgagaatattccggtgaatgttcaacatatgtatcagtacattattgtctctaacaaagacgaagattctttcacttt |
19468610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 34 - 219
Target Start/End: Complemental strand, 19555716 - 19555531
Alignment:
| Q |
34 |
ttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaat |
133 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
19555716 |
ttcaggtgaatttaatctagattgggaaccaaaacaaggtgaattgatcatcaagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaat |
19555617 |
T |
|
| Q |
134 |
ggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttt |
219 |
Q |
| |
|
||| | |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||| |
|
|
| T |
19555616 |
ggattattcgagaatattccggtgaatgttcaacatatgtatcagtacattattgtctctaacaaagacgaagattctttcacttt |
19555531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 19376497 - 19376733
Alignment:
| Q |
1 |
attggtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaa |
100 |
Q |
| |
|
|||||| || ||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |||||||| |
|
|
| T |
19376497 |
attggtgtcctggttgactccttcgcggacaacttcaggtgaatttagtcttgagtgggaaccaaaacaaggtgaactgaacatcaagaaaagcggcaaa |
19376596 |
T |
|
| Q |
101 |
gtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaaga |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| | |||||||| ||||| ||||||||| ||||||||| |||||| ||||| ||||||||| |
|
|
| T |
19376597 |
gtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccggccaatgttcaaaatatgtatcggtacatcattgtctctaacaagg |
19376696 |
T |
|
| Q |
201 |
atgaagattctttcgcttttgaagttaaagatgggaa |
237 |
Q |
| |
|
|||||||||| || ||||||| |||||||| |||| |
|
|
| T |
19376697 |
atgaagattcctttagttttgaaattaaagatcggaa |
19376733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 326 - 566
Target Start/End: Original strand, 19355714 - 19355951
Alignment:
| Q |
326 |
tgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaa |
425 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
19355714 |
tgttatggatataatagcgatggagggtgccaaaaatgggaggaaataccaaattgtagggaacctggtgaggtttttcggaaaaaggtgggaagaccaa |
19355813 |
T |
|
| Q |
426 |
gcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgt |
525 |
Q |
| |
|
||| ||||||||| || | |||| | |||| | ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
19355814 |
ataaa---gacaatgcaacaactactgaaggtgatgtgaattatggttatagtgattgcaagatgagatgttggagaaattgtaattgctatggattcca |
19355910 |
T |
|
| Q |
526 |
agaattatatgataatttgactggatgtgtattctattcat |
566 |
Q |
| |
|
||||||||| |||||| ||||||||| ||| |||||||| |
|
|
| T |
19355911 |
agaattatacattaattttactggatgtatatactattcat |
19355951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 302 - 566
Target Start/End: Original strand, 19404923 - 19405184
Alignment:
| Q |
302 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggttt |
401 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19404923 |
ggagatattggaaatgcagatatgtgttatggatataatagggacggagggtgccaaaagtgggaggatataccaacttgtagggaacctggtgaggtgt |
19405022 |
T |
|
| Q |
402 |
ttcagaaaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggag |
501 |
Q |
| |
|
|||||| ||| ||||| ||||| || || |||||||||| | |||| | |||| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19405023 |
ttcagaggaagacgggaagaccaaacatcat---caatgcatcaactactgaaggtgatgtgaattatggttacagtgattgcaagatgagatgttggag |
19405119 |
T |
|
| Q |
502 |
aaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcat |
566 |
Q |
| |
|
|||||||| |||| ||||||||| |||| |||| |||||| ||||||||| ||| |||||||| |
|
|
| T |
19405120 |
aaattgtaattgctatggattcgaagaactatacagtaattttactggatgtatatactattcat |
19405184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 19287595 - 19287825
Alignment:
| Q |
2 |
ttggtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaag |
101 |
Q |
| |
|
||||||||||||||| ||| || ||||| || |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
19287595 |
ttggtttcatggttggctcattcgctaccaaattcaggtggatttagtcttgaatgggaacctaaagaaggtgaattgaacatcaagcaacgcggcaaag |
19287694 |
T |
|
| Q |
102 |
tgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaa |
201 |
Q |
| |
|
||||||||||||| ||||||| || | ||||||| | ||||||||||||||| |||| ||||||| | ||||||| ||||||||||| ||||||||| | |
|
|
| T |
19287695 |
tgtattggaaaagcggaaaacgtagacgcaatggtttattcgagaacattccagtgaaagttcaacgtgtgtatcaatacattattgtctctaacaagga |
19287794 |
T |
|
| Q |
202 |
tgaagattctttcgcttttgaagttaaagat |
232 |
Q |
| |
|
|||||| || ||| |||| ||| | |||||| |
|
|
| T |
19287795 |
tgaagactccttcactttcgaaatcaaagat |
19287825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 19173052 - 19172821
Alignment:
| Q |
1 |
attggtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaa |
100 |
Q |
| |
|
||||||||| |||||| |||||| ||||| | |||||||| ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
19173052 |
attggtttcgtggttggctccttcgctaccgaattcaggtggatttagtgttgaatgggaaccaatggaaggtgaattgaacatcaagcaacgcggcaaa |
19172953 |
T |
|
| Q |
101 |
gtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaaga |
200 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| | ||| ||||||||| | |||| ||||||||| ||||||| ||||||||||| ||||||||| |
|
|
| T |
19172952 |
gtgtattggaaaagcggaaaacttaacagcaatggattattcaagaacattctagtgaaagttcaacatgtgtatcaatacattattgtctctaacaagg |
19172853 |
T |
|
| Q |
201 |
atgaagattctttcgcttttgaagttaaagat |
232 |
Q |
| |
|
||||||| || ||| |||| ||| | |||||| |
|
|
| T |
19172852 |
atgaagactccttcactttcgaaatcaaagat |
19172821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 302 - 523
Target Start/End: Complemental strand, 19555454 - 19555236
Alignment:
| Q |
302 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggttt |
401 |
Q |
| |
|
||||| |||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
19555454 |
ggagatattgtaaatgcagatatgtgttatggatataatagtgatggaggatgccaaaaatgggaggatataccaacttgtagggcacctggtgaggggt |
19555355 |
T |
|
| Q |
402 |
ttcagaaaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggag |
501 |
Q |
| |
|
|||||||||||| ||||| |||| || || |||||| || || | ||||||| |||| | |||| ||||||||||||||||||||| |||||||| |
|
|
| T |
19555354 |
ttcagaaaaaggcgggaagacca---aacatagacaattcaacaacgtatgaattcgatgtgacttatagttacagtgattgcaagatgaaatgttggaa |
19555258 |
T |
|
| Q |
502 |
aaattgtagttgcaatggattc |
523 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
19555257 |
aaattgtagttgcaatggattc |
19555236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 308 - 566
Target Start/End: Original strand, 19376801 - 19377056
Alignment:
| Q |
308 |
attggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcaga |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| | |
|
|
| T |
19376801 |
attggaaatgcagatatatgttatggatataatagtgatcgagggtgccaaaaatgggaggatataccagcttgcagggaacctggtgaggtgtttcaaa |
19376900 |
T |
|
| Q |
408 |
aaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattg |
507 |
Q |
| |
|
|||| |||| |||| || || |||||||||||| | |||| | |||| | ||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19376901 |
gaaagactggaagacca---aacatagacaatgcatcaaccattgaacaggatgtgacttatgtttacagtgattgcaagataagatgttggagaaattg |
19376997 |
T |
|
| Q |
508 |
tagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcat |
566 |
Q |
| |
|
|| ||||||||||||| |||||| ||| ||| |||||||||| |||||||||||| |
|
|
| T |
19376998 |
taattgcaatggattccaagaattttatcgcaatgggactggatgtatattctattcat |
19377056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19404628 - 19404846
Alignment:
| Q |
1 |
attggtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaa |
100 |
Q |
| |
|
|||||| |||||||| ||||||| || | || ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| ||| | |||||| |
|
|
| T |
19404628 |
attggtgtcatggttaactccttcgcggccaaattcaggtaaatttagtcttgagtgggaaccaaaacaaggtgaactgaacatcaagaaaagaggcaaa |
19404727 |
T |
|
| Q |
101 |
gtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaaga |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| | |||||||| ||||| ||||||||| ||||||||| |||| |||||| ||||||||| |
|
|
| T |
19404728 |
gtgtattggaaaagcggaaaacttaaaagcgatggattattcgagaatattccggccaatgttcaaactatgtatcaatacactattgtctctaacaagg |
19404827 |
T |
|
| Q |
201 |
atgaagattctttcgcttt |
219 |
Q |
| |
|
|||||||||||||| |||| |
|
|
| T |
19404828 |
atgaagattctttcacttt |
19404846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 313 - 566
Target Start/End: Original strand, 19337681 - 19337925
Alignment:
| Q |
313 |
aaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaag |
412 |
Q |
| |
|
||||||||| || |||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| | |
|
|
| T |
19337681 |
aaatgcagacatgtgttatggatataatagcgatggagggtgccaaaaatgggaggaaataccaaattgtagggaacctggtgaggtttttcggaaaatg |
19337780 |
T |
|
| Q |
413 |
gtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagtt |
512 |
Q |
| |
|
||||||| ||||| ||| ||||||||| || || ||||| || | |||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
19337781 |
gtgggaagaccaaataaa---gacaatgcaacaacagatgaa---cctg---ctaatggttacgatgattgcaagatgagatgttggagaaattgtaatt |
19337871 |
T |
|
| Q |
513 |
gcaatggattcgtagaattatatgataatttgactggatgtgtattctattcat |
566 |
Q |
| |
|
|| ||||||||| ||||||||| |||||| ||||||||| ||| |||||||| |
|
|
| T |
19337872 |
gctatggattcgaagaattatacagtaattttactggatgtatatactattcat |
19337925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 302 - 425
Target Start/End: Complemental strand, 19468533 - 19468410
Alignment:
| Q |
302 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggttt |
401 |
Q |
| |
|
||||| |||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
19468533 |
ggagatattgtaaatgcagatatgtgttatggatataatagtgatggaggatgccaaaaatgggaggatataccaacttgtagggcacctggtgaggggt |
19468434 |
T |
|
| Q |
402 |
ttcagaaaaaggtgggaacaccaa |
425 |
Q |
| |
|
|||||||||||| ||||| ||||| |
|
|
| T |
19468433 |
ttcagaaaaaggcgggaagaccaa |
19468410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 466 - 566
Target Start/End: Original strand, 19390951 - 19391051
Alignment:
| Q |
466 |
ttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattca |
565 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||| |
|
|
| T |
19390951 |
ttatagttacagtgattgcaagatgagatgttggaaaaattgtagttgcaatggattccaagaattgtatgataatgggactggatgtatattctattca |
19391050 |
T |
|
| Q |
566 |
t |
566 |
Q |
| |
|
| |
|
|
| T |
19391051 |
t |
19391051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 74 - 207
Target Start/End: Original strand, 19370913 - 19371046
Alignment:
| Q |
74 |
gaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgt |
173 |
Q |
| |
|
||||||||||| || |||| ||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||||||| |||||| |||||| ||| |
|
|
| T |
19370913 |
gaattgaacattaagaaacaaggcaaagtgcattggaaaagtggaaaacttagaagcaatggattattcgagaacattccagagaatgtccaacatgtgt |
19371012 |
T |
|
| Q |
174 |
atcagtacattattgtttctaacaagaatgaaga |
207 |
Q |
| |
|
||| ||||| ||||| |||||||| ||||||| |
|
|
| T |
19371013 |
atcgatacatgattgtctctaacaaagatgaaga |
19371046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 19172742 - 19172660
Alignment:
| Q |
317 |
gcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggt |
399 |
Q |
| |
|
|||||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
19172742 |
gcagatatgtgttatggctataataccgatggagggtgccaaaaatgggaggatataccaacctgcagggaacccggtgaggt |
19172660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 412
Target Start/End: Original strand, 19287901 - 19287999
Alignment:
| Q |
314 |
aatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaag |
412 |
Q |
| |
|
|||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||| |||||| |
|
|
| T |
19287901 |
aatgcagataagtgttatggatataataatgatgaagggtgccaaaaatgggaggatatgccaacttgcagggaacgtggtgaggtctttcaaaaaaag |
19287999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 74 - 207
Target Start/End: Original strand, 19341133 - 19341266
Alignment:
| Q |
74 |
gaattgaacatcaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgt |
173 |
Q |
| |
|
||||||||||| || |||| ||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||| | |||||| |||||| ||| |
|
|
| T |
19341133 |
gaattgaacattaagaaacaaggcaaagtgcattggaaaagtggaaaacttggaagcaatggattattcgagaacattctagagaatgtccaacatgtgt |
19341232 |
T |
|
| Q |
174 |
atcagtacattattgtttctaacaagaatgaaga |
207 |
Q |
| |
|
||| ||||| ||||| |||||||| ||||||| |
|
|
| T |
19341233 |
atcgatacatgattgtctctaacaaagatgaaga |
19341266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 567
Target Start/End: Complemental strand, 19172599 - 19172498
Alignment:
| Q |
466 |
ttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattca |
565 |
Q |
| |
|
|||||||||||||||||| ||||| || ||||||||||| ||| |||||||| ||| |||||| ||| |||| |||||||||| |||| |||||| |
|
|
| T |
19172599 |
ttatggttacagtgattgtaagatcagttgttggagaaactgtgaatgcaatgggttccaagaattttatcgtaatgggactggatgtatattttattca |
19172500 |
T |
|
| Q |
566 |
tc |
567 |
Q |
| |
|
|| |
|
|
| T |
19172499 |
tc |
19172498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 383
Target Start/End: Original strand, 19371145 - 19371192
Alignment:
| Q |
336 |
ataatagcaatggagggtgccaaaaatgggaggatataccaacttgta |
383 |
Q |
| |
|
||||||| ||||| || ||||||||||||||| ||||||||||||||| |
|
|
| T |
19371145 |
ataatagtaatggtggatgccaaaaatgggagtatataccaacttgta |
19371192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 96; Significance: 8e-47; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 19542950 - 19543177
Alignment:
| Q |
5 |
gtttcatggttgactccttagctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatcaaaaaacgcggcaaagtgt |
104 |
Q |
| |
|
||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| |||||||| | ||||| ||| |||||||||||| |
|
|
| T |
19542950 |
gtttcatggatgactccttcgctatcaacttcaggtgaatttagtcttgaatgggaaccaaagcaacgtgaattggaaatcaagaaaagcggcaaagtgt |
19543049 |
T |
|
| Q |
105 |
attggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatga |
204 |
Q |
| |
|
|||||||||| |||||||||| ||| ||||| | |||| |||||| || ||||||||||| | ||||| | ||||||||||||||||| || |||| |
|
|
| T |
19543050 |
attggaaaagcggaaaacttagaagaaatgggttattcgtgaacataccggcgaatgttcaacgtgtgtatgaatacattattgtttctaagaaagatga |
19543149 |
T |
|
| Q |
205 |
agattctttcgcttttgaagttaaagat |
232 |
Q |
| |
|
|||||| || ||||| || |||||||| |
|
|
| T |
19543150 |
agattcctttacttttaaaattaaagat |
19543177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 302 - 398
Target Start/End: Original strand, 19543241 - 19543337
Alignment:
| Q |
302 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgagg |
398 |
Q |
| |
|
||||| |||||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19543241 |
ggagatattggaaatgcagacttgtgttatggatataatatcaacggagggtgccaaaaatgggaggatataccaagttgtagggaacctggtgagg |
19543337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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