View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16702_low_1 (Length: 929)

Name: NF16702_low_1
Description: NF16702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16702_low_1
NF16702_low_1
[»] chr2 (5 HSPs)
chr2 (24-216)||(18929696-18929887)
chr2 (743-926)||(17403898-17404081)
chr2 (40-220)||(17403198-17403377)
chr2 (22-123)||(26651299-26651400)
chr2 (68-188)||(25519999-25520118)
[»] chr3 (9 HSPs)
chr3 (43-221)||(9033046-9033225)
chr3 (37-220)||(4770126-4770307)
chr3 (42-191)||(4765286-4765434)
chr3 (43-123)||(15687340-15687420)
chr3 (15-122)||(24698727-24698834)
chr3 (28-121)||(16242605-16242699)
chr3 (26-123)||(29614037-29614135)
chr3 (43-110)||(4832190-4832258)
chr3 (40-123)||(13428406-13428488)
[»] chr6 (6 HSPs)
chr6 (15-220)||(17525241-17525444)
chr6 (62-190)||(31125745-31125872)
chr6 (43-217)||(22394009-22394179)
chr6 (39-123)||(16177672-16177759)
chr6 (26-82)||(1176918-1176974)
chr6 (26-112)||(32784447-32784534)
[»] chr5 (12 HSPs)
chr5 (26-193)||(20064063-20064227)
chr5 (26-124)||(25951685-25951783)
chr5 (26-123)||(20058300-20058397)
chr5 (26-124)||(21165557-21165655)
chr5 (26-126)||(23209772-23209872)
chr5 (745-812)||(24879513-24879580)
chr5 (30-123)||(20061232-20061323)
chr5 (79-123)||(19217727-19217771)
chr5 (42-150)||(24878782-24878889)
chr5 (79-154)||(17987914-17987988)
chr5 (26-77)||(20713596-20713647)
chr5 (44-154)||(22011479-22011588)
[»] chr4 (2 HSPs)
chr4 (15-124)||(11362051-11362160)
chr4 (79-157)||(10071001-10071078)
[»] chr8 (4 HSPs)
chr8 (15-124)||(23539981-23540090)
chr8 (25-235)||(28371496-28371705)
chr8 (43-121)||(10662109-10662187)
chr8 (43-220)||(16600980-16601159)
[»] chr7 (6 HSPs)
chr7 (43-136)||(2545771-2545864)
chr7 (15-121)||(14986744-14986846)
chr7 (15-121)||(15416355-15416457)
chr7 (26-123)||(4173104-4173201)
chr7 (15-124)||(20146262-20146371)
chr7 (89-125)||(2563197-2563233)
[»] chr1 (4 HSPs)
chr1 (42-235)||(22619579-22619770)
chr1 (15-123)||(11013493-11013601)
chr1 (15-120)||(20146581-20146686)
chr1 (42-124)||(17615684-17615766)
[»] scaffold0002 (1 HSPs)
scaffold0002 (67-220)||(373696-373847)
[»] scaffold0795 (1 HSPs)
scaffold0795 (15-123)||(5725-5833)
[»] scaffold0555 (1 HSPs)
scaffold0555 (36-116)||(5337-5417)
[»] scaffold0161 (1 HSPs)
scaffold0161 (15-116)||(5287-5388)


Alignment Details
Target: chr2 (Bit Score: 129; Significance: 3e-66; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 24 - 216
Target Start/End: Original strand, 18929696 - 18929887
Alignment:
Q  24 gaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 123  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  18929696 gaaactcctttaattgaggaaaatacttcaattcctgcaagagtaaaagtcaactaatgttcaccacattaaatgaggttggtgaaaataccagctaaca 18929795  T
Q  124 aattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgat 216  Q
    |||| |||| ||| ||||| |||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18929796 aatttcccctcaa-aaatgtcattttcgactgaatatattcaaaggagagaattgacatttttgagaaaactctaagtatttcaaagcatgat 18929887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 743 - 926
Target Start/End: Original strand, 17403898 - 17404081
Alignment:
Q  743 ccaagatttggaaatctcatgtacttattccatactctgtctctggtactgttcacgccttcctagggccctttgcatattccaaattagaccctgaaaa 842  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||  ||||||| |   || ||||||||||| ||||||||||    
T  17403898 ccaagatttagaaatctcaggtactcattccatactctgtctctggtactgtttacgcctttatagggccttacccagattccaaattacaccctgaaaa 17403997  T
Q  843 ggttgaggacgactttcctggccgcgaaggtcacaaacctatagtcttctcacatgattcgctcaatatgtccttaatgagcca 926  Q
    ||||||||| |||||||||||| ||||||||| |||||||| |||| | ||||||| ||||||||| ||||| || ||||||||    
T  17403998 ggttgaggaagactttcctggcagcgaaggtcgcaaacctagagtcctttcacatgcttcgctcaacatgtctttcatgagcca 17404081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 40 - 220
Target Start/End: Original strand, 17403198 - 17403377
Alignment:
Q  40 aagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaa 139  Q
    ||||||||||||||||| ||||||  |||||| | ||| |||||||||||||||||||||||||||| ||| |||||||||| ||||| |||   || ||    
T  17403198 aagaaaagacttcaattgctgcaaaggtaaaagttaactaatgttgaccacattaaatgaggctggtaaaattaccagctaaaaaatttcccaaaaaaaa 17403297  T
Q  140 atgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtca 220  Q
    |||||||||| |||  || ||  || | |||||  |||||||||||| || |||| |||||||||||||||||||||||||    
T  17403298 atgccatttttgactaaagattttcgaaggagaagattgacatttttcag-aaactctaagtatttcaaagcatgatgtca 17403377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 26651299 - 26651400
Alignment:
Q  22 ttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 121  Q
    ||||||||||||   |||||||||| ||||| ||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| |||| |||||    
T  26651299 ttgaaactccttaagttgaagaaaaaacttcgatttctgcaagagtaaaagtcaactaatattgaccacattaaatgaggctggtgaaattacctgctaa 26651398  T
Q  122 ca 123  Q
    ||    
T  26651399 ca 26651400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 25520118 - 25519999
Alignment:
Q  68 aaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaac 167  Q
    |||| ||||| |||||||||  ||||||||  | ||  |||||||||   ||||||||||||| ||||| |||||||||||||||| |||||||||| |     
T  25520118 aaaagtcaactaatgttgactgcattaaattggccttttgaaaatacagcctaacaaattgccacccaa-aaatgccattttcgactgaatataatcgaa 25520020  T
Q  168 ggagagaattgacatttttga 188  Q
    ||||| ||||| |||||||||    
T  25520019 ggagataattggcatttttga 25519999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 1e-52; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 43 - 221
Target Start/End: Complemental strand, 9033225 - 9033046
Alignment:
Q  43 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaatt--gccccccaagaaa 140  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||| |||    
T  9033225 aaaagacttcaattcctgcaagagtaaaagtcaactaatgttgaccatattaaatgaggctggtgaaaataccagctaacaaattgggacccccaa-aaa 9033127  T
Q  141 tgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtcac 221  Q
    ||||||||||||| |||||||||||| |||| |||||| |||||||| |||||    ||||||| ||||||||||||||||    
T  9033126 tgccattttcgactgaatataatcaaaggagggaattggcatttttgggaaaaattaaagtattccaaagcatgatgtcac 9033046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 37 - 220
Target Start/End: Original strand, 4770126 - 4770307
Alignment:
Q  37 ttgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaa 136  Q
    |||||||||||||| | |||||||||||  ||||| | ||| ||||||| |||||||||| ||| ||| | ||| ||||||||||||| || ||||||      
T  4770126 ttgaagaaaagactacgattcctgcaaggataaaagtaaacgaatgttggccacattaaacgagtctgttaaaattaccagctaacaatttacccccc-t 4770224  T
Q  137 gaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtca 220  Q
    ||||||||||||||||| |||| || || | ||||||||||| ||||||| || |||| |||||||||||||||||||||||||    
T  4770225 gaaatgccattttcgactgaatctattcgaaggagagaattggcattttttag-aaactctaagtatttcaaagcatgatgtca 4770307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 42 - 191
Target Start/End: Complemental strand, 4765434 - 4765286
Alignment:
Q  42 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 141  Q
    ||||| ||||| |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||| |||||||||| | |||||| ||||    
T  4765434 gaaaaaacttcgattcctgcaagagtaaaagtcaactaatgttgatcacattaaatgaggctggtgaaaattccaactaacaaattacaccccaa-aaat 4765336  T
Q  142 gccattttcgacggaatataatcaacggagagaattgacatttttgagaa 191  Q
    |||||||||||| ||| | | |  | |||||||||||  |||||||||||    
T  4765335 gccattttcgactgaacaaattagaaggagagaattggtatttttgagaa 4765286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 15687340 - 15687420
Alignment:
Q  43 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 123  Q
    |||||||||  |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  15687340 aaaagactttgattcctacaagagtaaaagtcaactaatgttgaccacattaaatgaggctggtgaacttaccagctaaca 15687420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 24698834 - 24698727
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatac 114  Q
    |||||| | ||||||||||   ||||||||||||||||||||||| ||| ||||||| ||||| ||||||||| | ||||||||||| |||||||| ||     
T  24698834 catctcgtcgaaactccttatgttgaagaaaagacttcaattcctccaatagtaaaagtcaactaatgttgactaaattaaatgaggttggtgaaattat 24698735  T
Q  115 cagctaac 122  Q
    ||||||||    
T  24698734 cagctaac 24698727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 16242699 - 16242605
Alignment:
Q  28 ctcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatc-aaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 121  Q
    ||||||||||||| |||||||||||  ||||||||| ||||| | || ||| ||||||||||||||||||||||| || ||||||||||||||||    
T  16242699 ctcctttgattgaggaaaagacttcgcttcctgcaaaagtaacagtctaactaatgttgaccacattaaatgaggttgatgaaaataccagctaa 16242605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 29614135 - 29614037
Alignment:
Q  26 aactcctttgattgaagaaaaga-cttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 123  Q
    |||||||| | |||||||||| | |||  |||| ||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||| |||||||||    
T  29614135 aactccttcgtttgaagaaaaaaactttgattcatgcaagagtaaaagtcaactaatattgaccacattaaatgaggctagtgaaaatagcagctaaca 29614037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 4832258 - 4832190
Alignment:
Q  43 aaaagacttcaattcctgcaagagtaaaaa-tcaaccaatgttgaccacattaaatgaggctggtgaaa 110  Q
    |||||||||| ||||||||||   |||||| ||||| ||||||||||| ||||||||||||||||||||    
T  4832258 aaaagacttcgattcctgcaaagataaaaagtcaactaatgttgaccatattaaatgaggctggtgaaa 4832190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 13428488 - 13428406
Alignment:
Q  40 aagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 123  Q
    ||||||| ||||| |||| ||||| ||  ||| ||||| ||||| |||| ||||||| ||||||||||||| ||||||||||||    
T  13428488 aagaaaacacttcgattcatgcaa-agataaagtcaactaatgtcgaccgcattaaacgaggctggtgaaattaccagctaaca 13428406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 5e-43; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 17525241 - 17525444
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatac 114  Q
    |||||| |||||||| |||   ||||||||||| |||| ||||||  | |||||||| ||||| |||||||||||||||||||||| ||||||||| |||    
T  17525241 catctcgttgaaacttcttaagttgaagaaaaggcttcgattcctagaggagtaaaagtcaactaatgttgaccacattaaatgagactggtgaaattac 17525340  T
Q  115 cagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatg 214  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||| |||| |||||||||    |||||||| ||||| |||||||||| ||||||||    
T  17525341 cagctaacaaattgccccccaa-aaatgctattttcgacaaaatatattcaaaggagagaatcagaatttttga-aaaactctaagtatttaaaagcatg 17525438  T
Q  215 atgtca 220  Q
    ||||||    
T  17525439 atgtca 17525444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 31125872 - 31125745
Alignment:
Q  62 aagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatata 161  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||  |||||| || |||||||    
T  31125872 aagagtaaaagtcaactaatgttgaccacattaaatgaggatggtgaaaatatcagctaaaaaattgccccctaa-aaatgaaattttctactgaatata 31125774  T
Q  162 atcaacggagagaattgacatttttgaga 190  Q
     |||| ||||||||||| |||||||||||    
T  31125773 ttcaaaggagagaattggcatttttgaga 31125745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 22394179 - 22394009
Alignment:
Q  43 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatg 142  Q
    |||||||||  ||||||||||||||||||   ||| ||||||||||||||||||  |||||||||||| ||||| |||||| |||||||||||| |||||    
T  22394179 aaaagactttgattcctgcaagagtaaaacggaactaatgttgaccacattaaa--aggctggtgaaattaccaactaacagattgccccccaa-aaatg 22394083  T
Q  143 ccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatg 217  Q
     ||||||||||  ||| || |  | ||||| |||||  ||||||||| |||| ||||||||| || |||||||||    
T  22394082 tcattttcgacaaaatctatttgaaggagataattggaatttttgag-aaactctaagtattccagagcatgatg 22394009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 16177672 - 16177759
Alignment:
Q  39 gaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggct---ggtgaaaataccagctaaca 123  Q
    |||||||||||||  |||||| ||||||||||| ||||| |||||| ||||||||||||||||||   ||||||||||||||||||||    
T  16177672 gaagaaaagactttgattcctacaagagtaaaagtcaactaatgttaaccacattaaatgaggctggaggtgaaaataccagctaaca 16177759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 1176974 - 1176918
Alignment:
Q  26 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatg 82  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  1176974 aactccttttattgaagaaaagatttcgattcctgcaagagtaaaagtcaactaatg 1176918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 32784447 - 32784534
Alignment:
Q  26 aactcctttgattgaagaaaa-gacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaat 112  Q
    |||||| ||||||| |||||| || ||||||||||| || ||||||| ||||| ||| || ||||||||||||||| ||| |||||||    
T  32784447 aactccattgattgtagaaaaagatttcaattcctgtaaaagtaaaagtcaactaatattaaccacattaaatgagactgatgaaaat 32784534  T

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Target: chr5 (Bit Score: 85; Significance: 5e-40; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 20064227 - 20064063
Alignment:
Q  26 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaa 125  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||| |||||||||||    
T  20064227 aactcttttgattgaagaaaagacttcgattcctgcaagagtaaaagtcaactgatgttgaccacattaaacgaggctggtgaaaataacagctaacaaa 20064128  T
Q  126 ttgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaa 193  Q
    ||| ||||||| ||||| |||||||||  ||   || |||| |||||| ||||||||||||| |||||    
T  20064127 ttgtcccccaa-aaatgtcattttcgaatga--ctactcaaaggagaggattgacatttttgggaaaa 20064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 25951685 - 25951783
Alignment:
Q  26 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 124  Q
    |||||||||||||  |||||||||||  |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25951685 aactcctttgattagagaaaagactttgattcgtgcaagagtaaaagtcaactaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 25951783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 20058397 - 20058300
Alignment:
Q  26 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 123  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||| ||||| |||  |||||||||||||||||||||||||||||| |||||||||    
T  20058397 aactcttttgattgaagaaaagacttcgattcctgcaagagtaaaagtcaactaatactgaccacattaaatgaggctggtgaaaatatcagctaaca 20058300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 21165557 - 21165655
Alignment:
Q  26 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 124  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||| |||||||||    
T  21165557 aactcctttgattgaaggaaagacttcgcttcctgcaagagtaaaagtcaactaatgttgaccacattaagtgaggctggtaaaaatactagctaacaa 21165655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 23209872 - 23209772
Alignment:
Q  26 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaa 125  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||| ||||| ||||||| |||    
T  23209872 aactcctttgtttgaagaaaatacttcgattcctgcaagagtaaaagtcaactattgttgaccacattaattgaggctggtgcaaataacagctaataaa 23209773  T
Q  126 t 126  Q
    |    
T  23209772 t 23209772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 745 - 812
Target Start/End: Original strand, 24879513 - 24879580
Alignment:
Q  745 aagatttggaaatctcatgtacttattccatactctgtctctggtactgttcacgccttcctagggcc 812  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||| || |||| ||||||||    
T  24879513 aagatttggaaatctcaggtactcattccatactctgtctctggtactgtttacacctttctagggcc 24879580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 20061232 - 20061323
Alignment:
Q  30 cctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 123  Q
    ||||| ||||||||||| ||||| |||||||||||||||||| ||||| |||| |||||| |||||| |||||||||| |||||||||| ||||    
T  20061232 cctttcattgaagaaaa-acttcgattcctgcaagagtaaaagtcaactaatggtgaccatattaaacgaggctggtg-aaataccagcaaaca 20061323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 19217771 - 19217727
Alignment:
Q  79 aatgttgaccacattaaatgaggctggtgaaaataccagctaaca 123  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  19217771 aatgttgaccacattaaatgaggctggtgaaattaccagctaaca 19217727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 24878782 - 24878889
Alignment:
Q  42 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 141  Q
    ||||||||||| |||| |||||   ||||| ||||| |||||||||  ||||||||||| ||| ||||| |||  |||||||||||| ||||||| ||||    
T  24878782 gaaaagacttcgattcttgcaaagataaaagtcaactaatgttgactgcattaaatgagcctgttgaaattacaggctaacaaattgacccccaa-aaat 24878880  T
Q  142 gccattttc 150  Q
    | |||||||    
T  24878881 gtcattttc 24878889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 17987914 - 17987988
Alignment:
Q  79 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacg 154  Q
    ||||||||||| |||||||||| |||  |||| ||| |||||||||| |||||||||| |||| ||||||||||||    
T  17987914 aatgttgaccatattaaatgagcctgtcgaaattacaagctaacaaaatgccccccaa-aaatcccattttcgacg 17987988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 20713596 - 20713647
Alignment:
Q  26 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaac 77  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||| |||||    
T  20713596 aactcctttgattgaagaaaagactttgattcctgcaagaataaaagtcaac 20713647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 22011479 - 22011588
Alignment:
Q  44 aaagacttcaattcctgcaagagtaaaaa-tcaaccaa-tgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 141  Q
    |||| |||| |||||||||| |||||||| |||||||| |||||||||||||||||||  ||| ||||| |||   |||||||| |||||||  | ||||    
T  22011479 aaagccttcgattcctgcaa-agtaaaaagtcaaccaaatgttgaccacattaaatgaatctgttgaaattacagactaacaaactgccccc--aaaaat 22011575  T
Q  142 gccattttcgacg 154  Q
    |||||||||||||    
T  22011576 gccattttcgacg 22011588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 8e-36; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 11362051 - 11362160
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatac 114  Q
    |||||| ||||||||||||   ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  11362051 catctcgttgaaactccttaagttgaagaaaagacttcaatacctgcaagagtaaaagtcaactaatgttgaccactttaaatgaggctggtgaaaatac 11362150  T
Q  115 cagctaacaa 124  Q
    ||||||||||    
T  11362151 cagctaacaa 11362160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 10071001 - 10071078
Alignment:
Q  79 aatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaa 157  Q
    ||||||||||| |||||||||| |||  |||| |||  ||||||||| | |||||||| |||||| |||||||||||||    
T  10071001 aatgttgaccatattaaatgagcctgtcgaaattacaggctaacaaaattccccccaa-aaatgcaattttcgacggaa 10071078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 2e-33; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 23540090 - 23539981
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatac 114  Q
    |||||| | ||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||| |||||||||||||||||||||||||| |||||    
T  23540090 catctcgtcgaaactcctttgattgaagaaaagacttcaaatactgcaagagtaaaagtcaactaatattgaccacattaaatgaggctggtgacaatac 23539991  T
Q  115 cagctaacaa 124  Q
     |||||||||    
T  23539990 gagctaacaa 23539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 25 - 235
Target Start/End: Original strand, 28371496 - 28371705
Alignment:
Q  25 aaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 124  Q
    |||||||||| | ||| | ||||  ||| |||||| | ||| ||||| ||||| ||| ||| ||||||||||| | ||| |||||||||||| |||||||    
T  28371496 aaactcctttaactgagggaaaggtttcgattcctaccagaataaaagtcaactaatattggccacattaaattatgctagtgaaaataccaactaacaa 28371595  T
Q  125 attgccccccaagaaatgccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtcacaat 224  Q
    |||||| || || |||||  ||||||||| ||||| | ||||  |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||  |    
T  28371596 attgccaccaaa-aaatgttattttcgactgaatacattcaaaagagagaattgacatttttgagaaaactctatgtattccaaagcatgatgtcactct 28371694  T
Q  225 tatcatgactt 235  Q
     ||||||||||    
T  28371695 aatcatgactt 28371705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 10662109 - 10662187
Alignment:
Q  43 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaa 121  Q
    |||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || |||||||    
T  10662109 aaaagacttcgagtcctgcaagagtaaaagtcaactaatgttgaccacattaaatgagtctggtgaaattatcagctaa 10662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 220
Target Start/End: Original strand, 16600980 - 16601159
Alignment:
Q  43 aaaagacttcaattcctgcaagagtaaaaa-tcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 141  Q
    |||| ||||||||||||||||   |||||| ||||| |||||||||  ||||||||||| ||| ||||| |||  ||||| |||||| ||| ||| ||||    
T  16600980 aaaatacttcaattcctgcaaagataaaaagtcaactaatgttgactgcattaaatgagtctgttgaaattacaggctaataaattg-ccctcaaaaaat 16601078  T
Q  142 gccattttcgacggaatata-atcaacggagagaattgacatttttgagaaaacg--ctaagtatttcaaagcatgatgtca 220  Q
    | |||||||||| ||| | |  || | |||| |||||||||||||||| ||||||  | ||| |||||||||||||||||||    
T  16601079 gtcattttcgactgaaaaaatttcgaaggagggaattgacatttttga-aaaacgtcccaagcatttcaaagcatgatgtca 16601159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 4e-31; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 2545771 - 2545864
Alignment:
Q  43 aaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaa 136  Q
    |||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2545771 aaaagacttcgattcctgcaagagtaaaagtcaagtaatgttgaccacattaaatgaggctggtgaaattaccagctaacaaattgcctcccaa 2545864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 14986846 - 14986744
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaag-acttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaata 113  Q
    |||||| |||||||| |||| |||| ||||||  ||||  |||||||||||||||||| ||||| |||||||||||     |||||||||||||||||||    
T  14986846 catctcgttgaaacttcttttattggagaaaaatacttggattcctgcaagagtaaaagtcaactaatgttgacca-----aatgaggctggtgaaaata 14986752  T
Q  114 ccagctaa 121  Q
    ||||||||    
T  14986751 ccagctaa 14986744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 15416457 - 15416355
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaag-acttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaata 113  Q
    |||||| |||||||| |||| |||| ||||||  ||||  |||||||||||||||||| ||||| |||||||||||     |||||||||||||||||||    
T  15416457 catctcgttgaaacttcttttattggagaaaaatacttggattcctgcaagagtaaaagtcaactaatgttgacca-----aatgaggctggtgaaaata 15416363  T
Q  114 ccagctaa 121  Q
    ||||||||    
T  15416362 ccagctaa 15416355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 4173201 - 4173104
Alignment:
Q  26 aactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaaca 123  Q
    ||||| ||||||||||| ||| ||||  || ||||||| | || || ||||| |||||||| |||||||||| |||| ||||||||||||||||||||    
T  4173201 aactcttttgattgaaggaaatactttgatacctgcaaaattataagtcaactaatgttgaacacattaaataaggcaggtgaaaataccagctaaca 4173104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 20146262 - 20146371
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatac 114  Q
    |||||| ||||||||||||| |  |||| |||  |||| ||||||  || ||||||| ||||| |||||||||||||||| || | |||| |||||||||    
T  20146262 catctcgttgaaactcctttaacagaaggaaaagcttcgattcctttaacagtaaaagtcaactaatgttgaccacattacataacgctgatgaaaatac 20146361  T
Q  115 cagctaacaa 124  Q
    || |||||||    
T  20146362 catctaacaa 20146371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 2563197 - 2563233
Alignment:
Q  89 acattaaatgaggctggtgaaaataccagctaacaaa 125  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2563197 acattaaatgaggctggtgaaattaccagctaacaaa 2563233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 3e-26; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 42 - 235
Target Start/End: Complemental strand, 22619770 - 22619579
Alignment:
Q  42 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaat 141  Q
    ||||||||||| ||||||||||   ||||| ||||| |||||||||||||||||||||| ||  || |||||   |||||||||||||| ||||| ||||    
T  22619770 gaaaagacttcgattcctgcaaagataaaagtcaactaatgttgaccacattaaatgagccttttggaaatataggctaacaaattgcctcccaa-aaat 22619672  T
Q  142 gccattttcgacggaatataatcaacggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtcacaattatcatgactt 235  Q
    | |||||||||| ||||| | || | ||||| |||||  | |||||| |||||  |||||||||||||||||||||||| | | ||||||||||    
T  22619671 gtcattttcgactgaatacattcgaaggagataattggtaattttga-aaaactataagtatttcaaagcatgatgtcatattaatcatgactt 22619579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 11013601 - 11013493
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatac 114  Q
    |||||| | ||||||||||   |||||||||||||||| |||||||||||||||||| | | | |||||||||||||||||||||||||| ||||| |||    
T  11013601 catctcgtcgaaactccttaagttgaagaaaagacttcgattcctgcaagagtaaaagtaagctaatgttgaccacattaaatgaggctgatgaaattac 11013502  T
Q  115 cagctaaca 123  Q
    |||||||||    
T  11013501 cagctaaca 11013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 20146581 - 20146686
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatac 114  Q
    |||||| | |||||||||  ||||||  |||||||||| |||||||||||||||| | | ||| ||||||| |||||||||||||| |||||||| ||||    
T  20146581 catctcgtcgaaactcctacgattgagtaaaagacttcgattcctgcaagagtaatagttaactaatgttggccacattaaatgagactggtgaatatac 20146680  T
Q  115 cagcta 120  Q
    ||||||    
T  20146681 cagcta 20146686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 17615684 - 17615766
Alignment:
Q  42 gaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaa 124  Q
    ||||||| ||| ||||||||||   ||||| ||||| |||||||||| ||||||||||| ||| ||||| |||  ||||||||    
T  17615684 gaaaagatttcgattcctgcaaagataaaagtcaactaatgttgaccgcattaaatgagtctgttgaaattacatgctaacaa 17615766  T

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Target: scaffold0002 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 67 - 220
Target Start/End: Complemental strand, 373847 - 373696
Alignment:
Q  67 taaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaataccagctaacaaattgccccccaagaaatgccattttcgacggaatataatcaa 166  Q
    ||||| ||||| ||||||||||||||||||||||| |||| |||  |||| ||||||||||||||||||| ||| ||||||||||||  ||  |  |  |    
T  373847 taaaagtcaactaatgttgaccacattaaatgaggttggtaaaataaccaactaacaaattgccccccaa-aaaagccattttcgacttaaattttttga 373749  T
Q  167 cggagagaattgacatttttgagaaaacgctaagtatttcaaagcatgatgtca 220  Q
     | ||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  373748 agaagagaattgtcatttttga-aaaactctaagtatttcaaagcatgatgtca 373696  T

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Target: scaffold0795 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 5833 - 5725
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatac 114  Q
    |||||| ||||||||||||| | ||| |||||| |||| ||||||||||||  |||| ||| | |||||||||| |||||||||||| |||| |||||||    
T  5833 catctcgttgaaactcctttaactgaggaaaaggcttcgattcctgcaagaaaaaaagtcacctaatgttgaccgcattaaatgaggttggtaaaaatac 5734  T
Q  115 cagctaaca 123  Q
    |||||||||    
T  5733 cagctaaca 5725  T

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Target: scaffold0555 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 5417 - 5337
Alignment:
Q  36 attgaagaaaagacttcaattcctgcaagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaatacca 116  Q
    ||||| ||||| ||||| || ||||||||||||||| ||||| || |||||||||| ||||||||||||||||||||||||    
T  5417 attgatgaaaaaacttcgatacctgcaagagtaaaagtcaactaaagttgaccacaataaatgaggctggtgaaaatacca 5337  T

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Target: scaffold0161 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 5287 - 5388
Alignment:
Q  15 catctctttgaaactcctttgattgaagaaaagacttcaattcctgc-aagagtaaaaatcaaccaatgttgaccacattaaatgaggctggtgaaaata 113  Q
    |||||| ||||| ||||||   |||||||||||||||  |||||||| |||| ||||| ||||| ||||||||||||||||||||| |||||||||| ||    
T  5287 catctcgttgaagctccttaagttgaagaaaagactttgattcctgcgaaga-taaaagtcaactaatgttgaccacattaaatgatgctggtgaaatta 5385  T
Q  114 cca 116  Q
    |||    
T  5386 cca 5388  T

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