View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16702_low_26 (Length: 441)

Name: NF16702_low_26
Description: NF16702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16702_low_26
NF16702_low_26
[»] chr5 (44 HSPs)
chr5 (267-427)||(28211275-28211435)
chr5 (9-184)||(2865124-2865299)
chr5 (9-184)||(18183338-18183513)
chr5 (9-184)||(5819298-5819473)
chr5 (9-184)||(8647439-8647614)
chr5 (9-184)||(19359137-19359312)
chr5 (9-184)||(24362205-24362380)
chr5 (9-184)||(15708972-15709146)
chr5 (9-184)||(8460931-8461106)
chr5 (9-184)||(29455111-29455286)
chr5 (13-184)||(14215616-14215787)
chr5 (9-182)||(15372242-15372415)
chr5 (9-184)||(164560-164735)
chr5 (25-182)||(18182973-18183131)
chr5 (25-182)||(5818932-5819090)
chr5 (25-179)||(24361843-24361997)
chr5 (59-184)||(19359555-19359680)
chr5 (25-184)||(8647822-8647982)
chr5 (20-184)||(14463901-14464064)
chr5 (25-183)||(2864756-2864915)
chr5 (9-184)||(16018590-16018763)
chr5 (25-179)||(24325218-24325372)
chr5 (9-163)||(25000112-25000266)
chr5 (25-183)||(14215243-14215402)
chr5 (9-183)||(24331929-24332107)
chr5 (33-184)||(8461323-8461475)
chr5 (23-184)||(25000471-25000633)
chr5 (25-184)||(29454741-29454901)
chr5 (33-184)||(164192-164343)
chr5 (23-182)||(16018969-16019129)
chr5 (25-184)||(24331560-24331722)
chr5 (43-184)||(7349420-7349561)
chr5 (65-184)||(4222147-4222266)
chr5 (25-184)||(15709353-15709512)
chr5 (59-184)||(7348560-7348685)
chr5 (72-183)||(15371873-15371983)
chr5 (47-184)||(4219664-4219800)
chr5 (45-184)||(4623149-4623286)
chr5 (67-187)||(6018312-6018431)
chr5 (47-179)||(6019177-6019309)
chr5 (57-172)||(4624642-4624757)
chr5 (43-103)||(13814131-13814190)
chr5 (59-103)||(14462686-14462730)
chr5 (9-49)||(16752717-16752757)
[»] scaffold0295 (2 HSPs)
scaffold0295 (9-184)||(4794-4969)
scaffold0295 (71-183)||(5222-5334)
[»] chr6 (35 HSPs)
chr6 (9-184)||(10900299-10900474)
chr6 (9-184)||(15828010-15828185)
chr6 (9-184)||(20741101-20741276)
chr6 (9-184)||(11276951-11277126)
chr6 (9-184)||(18257138-18257313)
chr6 (9-184)||(11444988-11445163)
chr6 (11-184)||(1149802-1149976)
chr6 (9-186)||(31470685-31470862)
chr6 (25-184)||(2319673-2319832)
chr6 (11-184)||(12935528-12935701)
chr6 (9-184)||(28472638-28472812)
chr6 (9-184)||(29859827-29860001)
chr6 (9-182)||(2322588-2322760)
chr6 (16-182)||(10899942-10900109)
chr6 (9-184)||(18505288-18505463)
chr6 (25-184)||(12935158-12935318)
chr6 (25-184)||(23075512-23075672)
chr6 (22-184)||(4811373-4811535)
chr6 (25-184)||(11445371-11445531)
chr6 (25-184)||(22219737-22219897)
chr6 (9-184)||(23074000-23074164)
chr6 (25-184)||(31470316-31470476)
chr6 (59-182)||(18504922-18505045)
chr6 (68-184)||(18257565-18257681)
chr6 (33-184)||(20741493-20741648)
chr6 (16-184)||(11276591-11276760)
chr6 (43-183)||(29033436-29033577)
chr6 (43-183)||(29035040-29035180)
chr6 (59-184)||(4811675-4811800)
chr6 (59-184)||(15827639-15827766)
chr6 (57-182)||(3835143-3835268)
chr6 (44-184)||(18296146-18296285)
chr6 (97-184)||(1149466-1149553)
chr6 (129-184)||(22534214-22534269)
chr6 (10-92)||(35163557-35163639)
[»] chr7 (32 HSPs)
chr7 (9-182)||(19830423-19830596)
chr7 (9-184)||(19590526-19590701)
chr7 (9-184)||(37786768-37786943)
chr7 (11-184)||(32004985-32005158)
chr7 (11-184)||(35289272-35289445)
chr7 (9-184)||(38858644-38858819)
chr7 (11-184)||(2659211-2659384)
chr7 (9-182)||(29100220-29100393)
chr7 (11-184)||(34534162-34534335)
chr7 (9-182)||(4641443-4641616)
chr7 (16-182)||(4478076-4478242)
chr7 (16-179)||(23953105-23953268)
chr7 (25-184)||(19590909-19591069)
chr7 (33-184)||(34533792-34533944)
chr7 (25-184)||(38859025-38859185)
chr7 (25-184)||(2658840-2659000)
chr7 (26-184)||(32004615-32004774)
chr7 (27-184)||(37787153-37787311)
chr7 (47-184)||(28583440-28583577)
chr7 (69-184)||(35288904-35289019)
chr7 (68-184)||(23952731-23952848)
chr7 (59-172)||(29099863-29099976)
chr7 (43-184)||(38160952-38161093)
chr7 (44-184)||(28584326-28584466)
chr7 (25-182)||(4641828-4641983)
chr7 (25-184)||(19830804-19830963)
chr7 (9-185)||(35579256-35579431)
chr7 (16-51)||(32427397-32427432)
chr7 (135-184)||(49064035-49064084)
chr7 (134-182)||(787281-787329)
chr7 (9-49)||(35579034-35579074)
chr7 (121-184)||(39137014-39137078)
[»] chr1 (43 HSPs)
chr1 (9-184)||(50970647-50970822)
chr1 (16-184)||(5540194-5540362)
chr1 (16-184)||(29306954-29307122)
chr1 (9-184)||(18984120-18984295)
chr1 (9-184)||(29869621-29869796)
chr1 (9-182)||(5962947-5963120)
chr1 (9-183)||(33144288-33144462)
chr1 (9-182)||(15173099-15173272)
chr1 (16-184)||(15646571-15646739)
chr1 (9-184)||(17433217-17433392)
chr1 (9-184)||(21856412-21856587)
chr1 (9-184)||(8678911-8679085)
chr1 (9-184)||(9018974-9019149)
chr1 (9-183)||(39154021-39154195)
chr1 (11-184)||(26859431-26859603)
chr1 (16-184)||(29307317-29307486)
chr1 (23-183)||(17433597-17433758)
chr1 (68-186)||(8678540-8678658)
chr1 (25-184)||(29870003-29870163)
chr1 (33-187)||(4636363-4636518)
chr1 (59-186)||(5539815-5539942)
chr1 (27-184)||(50970279-50970437)
chr1 (59-184)||(18984538-18984663)
chr1 (25-177)||(33143925-33144078)
chr1 (25-184)||(15173478-15173637)
chr1 (68-184)||(15646193-15646309)
chr1 (25-183)||(21856044-21856203)
chr1 (59-184)||(39154439-39154564)
chr1 (68-184)||(26859060-26859176)
chr1 (16-184)||(9019338-9019507)
chr1 (45-184)||(52268291-52268430)
chr1 (11-125)||(4636033-4636146)
chr1 (59-184)||(5962579-5962704)
chr1 (59-184)||(17112283-17112407)
chr1 (69-183)||(52269177-52269291)
chr1 (99-184)||(2733416-2733501)
chr1 (120-188)||(47826961-47827029)
chr1 (85-177)||(47827033-47827125)
chr1 (132-183)||(50304441-50304492)
chr1 (15-49)||(17088516-17088550)
chr1 (132-182)||(17641862-17641912)
chr1 (59-184)||(44802591-44802716)
chr1 (104-184)||(50419725-50419805)
[»] chr3 (61 HSPs)
chr3 (9-182)||(5136983-5137156)
chr3 (9-182)||(41046703-41046876)
chr3 (9-184)||(39555946-39556121)
chr3 (9-184)||(31779021-31779196)
chr3 (11-184)||(20840561-20840734)
chr3 (9-184)||(24300925-24301100)
chr3 (9-184)||(37726930-37727105)
chr3 (9-184)||(23644463-23644638)
chr3 (9-184)||(30104483-30104657)
chr3 (16-184)||(43973442-43973610)
chr3 (9-183)||(25853596-25853770)
chr3 (9-181)||(22425182-22425354)
chr3 (33-184)||(48452990-48453141)
chr3 (11-184)||(32535330-32535507)
chr3 (9-184)||(27393946-27394121)
chr3 (9-182)||(26274936-26275108)
chr3 (9-184)||(26837725-26837899)
chr3 (9-184)||(17464860-17465036)
chr3 (25-184)||(4275748-4275908)
chr3 (25-184)||(37727314-37727474)
chr3 (25-184)||(43973824-43973984)
chr3 (59-184)||(17464492-17464617)
chr3 (25-184)||(20840945-20841105)
chr3 (25-184)||(25853235-25853395)
chr3 (25-184)||(27393662-27393822)
chr3 (25-184)||(39555579-39555739)
chr3 (25-184)||(31778654-31778814)
chr3 (44-182)||(25612381-25612519)
chr3 (23-184)||(29801798-29801960)
chr3 (59-184)||(30098182-30098307)
chr3 (59-182)||(32534962-32535085)
chr3 (25-184)||(5137365-5137525)
chr3 (25-184)||(23644849-23645009)
chr3 (64-184)||(29801357-29801477)
chr3 (46-184)||(23228414-23228551)
chr3 (43-184)||(50116812-50116953)
chr3 (25-184)||(22424815-22424975)
chr3 (25-182)||(26837363-26837521)
chr3 (44-184)||(37220558-37220698)
chr3 (59-182)||(26274570-26274693)
chr3 (45-184)||(32697106-32697244)
chr3 (25-182)||(24300560-24300717)
chr3 (59-184)||(51474753-51474878)
chr3 (57-183)||(25420558-25420684)
chr3 (25-182)||(41047083-41047239)
chr3 (71-187)||(51473426-51473542)
chr3 (59-184)||(45965939-45966064)
chr3 (52-166)||(18010157-18010271)
chr3 (99-184)||(37222030-37222115)
chr3 (58-184)||(25419145-25419273)
chr3 (58-182)||(32695706-32695830)
chr3 (8-184)||(49407797-49407972)
chr3 (43-107)||(23227334-23227398)
chr3 (9-49)||(37075824-37075864)
chr3 (9-49)||(55192253-55192293)
chr3 (9-69)||(29801532-29801592)
chr3 (9-184)||(27200062-27200236)
chr3 (9-183)||(36701466-36701640)
chr3 (134-184)||(52375826-52375876)
chr3 (134-182)||(22370599-22370647)
chr3 (132-184)||(49720854-49720906)
[»] chr2 (41 HSPs)
chr2 (11-182)||(11090524-11090695)
chr2 (9-184)||(40027141-40027316)
chr2 (9-182)||(40815714-40815887)
chr2 (9-184)||(22374321-22374496)
chr2 (9-184)||(239354-239528)
chr2 (9-184)||(18451200-18451375)
chr2 (11-184)||(28616614-28616788)
chr2 (9-184)||(1978109-1978284)
chr2 (9-184)||(43058334-43058509)
chr2 (9-179)||(3025472-3025641)
chr2 (12-182)||(14432145-14432315)
chr2 (9-184)||(26538098-26538273)
chr2 (16-184)||(26538454-26538623)
chr2 (16-182)||(8425736-8425902)
chr2 (44-184)||(20444750-20444890)
chr2 (25-184)||(22374709-22374869)
chr2 (44-184)||(35781067-35781207)
chr2 (25-183)||(40815347-40815506)
chr2 (11-184)||(7446343-7446519)
chr2 (25-184)||(7446730-7446890)
chr2 (25-184)||(18450831-18450991)
chr2 (70-184)||(11090950-11091064)
chr2 (59-182)||(40027559-40027682)
chr2 (60-184)||(20440451-20440575)
chr2 (44-184)||(35779709-35779849)
chr2 (25-183)||(14432525-14432684)
chr2 (59-184)||(1978528-1978653)
chr2 (59-184)||(28617033-28617158)
chr2 (25-184)||(239736-239896)
chr2 (68-184)||(28847123-28847239)
chr2 (25-184)||(43058717-43058876)
chr2 (44-183)||(8972239-8972378)
chr2 (43-183)||(15551501-15551641)
chr2 (26-182)||(8425358-8425514)
chr2 (26-184)||(3025848-3026005)
chr2 (59-183)||(15552473-15552596)
chr2 (9-184)||(28143400-28143574)
chr2 (27-184)||(31797166-31797322)
chr2 (132-184)||(4355756-4355808)
chr2 (134-184)||(42192738-42192788)
chr2 (132-184)||(44220138-44220190)
[»] scaffold0019 (1 HSPs)
scaffold0019 (9-184)||(134042-134217)
[»] chr8 (32 HSPs)
chr8 (9-184)||(19176659-19176834)
chr8 (11-184)||(11656456-11656630)
chr8 (9-182)||(33328161-33328334)
chr8 (9-184)||(12571864-12572040)
chr8 (12-184)||(41681135-41681306)
chr8 (9-181)||(13224645-13224816)
chr8 (9-184)||(9930026-9930201)
chr8 (9-184)||(9178005-9178179)
chr8 (9-184)||(44831614-44831789)
chr8 (9-184)||(31133221-31133396)
chr8 (25-184)||(13225023-13225183)
chr8 (33-184)||(19176291-19176443)
chr8 (9-182)||(4630161-4630328)
chr8 (26-185)||(31133605-31133765)
chr8 (68-184)||(41681562-41681678)
chr8 (25-184)||(44831248-44831408)
chr8 (59-182)||(12572270-12572393)
chr8 (34-184)||(34540941-34541092)
chr8 (68-182)||(9928912-9929026)
chr8 (59-184)||(11656876-11657001)
chr8 (25-184)||(33742923-33743082)
chr8 (25-183)||(33328524-33328683)
chr8 (11-132)||(33743290-33743411)
chr8 (77-184)||(11336959-11337066)
chr8 (59-184)||(4629798-4629923)
chr8 (44-184)||(8073956-8074095)
chr8 (47-182)||(10918129-10918264)
chr8 (44-106)||(43958264-43958326)
chr8 (152-184)||(9177668-9177700)
chr8 (145-184)||(10919691-10919730)
chr8 (135-184)||(35427308-35427357)
chr8 (134-186)||(28254921-28254973)
[»] scaffold0951 (2 HSPs)
scaffold0951 (11-184)||(1668-1841)
scaffold0951 (25-184)||(2051-2211)
[»] scaffold0273 (2 HSPs)
scaffold0273 (9-184)||(4576-4751)
scaffold0273 (25-146)||(4242-4364)
[»] chr4 (66 HSPs)
chr4 (9-183)||(33109686-33109860)
chr4 (9-183)||(46193774-46193948)
chr4 (9-184)||(11153516-11153691)
chr4 (15-184)||(25447611-25447780)
chr4 (9-184)||(12234330-12234505)
chr4 (9-184)||(15523603-15523778)
chr4 (9-184)||(25937671-25937846)
chr4 (16-183)||(38962195-38962362)
chr4 (9-183)||(4219559-4219733)
chr4 (9-183)||(23494445-23494619)
chr4 (9-182)||(22434547-22434718)
chr4 (9-182)||(54995437-54995609)
chr4 (9-184)||(22170306-22170480)
chr4 (9-184)||(48526197-48526371)
chr4 (9-184)||(51020798-51020973)
chr4 (25-184)||(45082808-45082968)
chr4 (9-182)||(2118665-2118837)
chr4 (9-182)||(45082435-45082606)
chr4 (23-184)||(46193406-46193568)
chr4 (25-184)||(22434180-22434340)
chr4 (33-184)||(25447248-25447400)
chr4 (26-184)||(15523236-15523395)
chr4 (69-184)||(23494872-23494987)
chr4 (59-184)||(12234748-12234873)
chr4 (25-184)||(11153147-11153307)
chr4 (25-184)||(20470895-20471055)
chr4 (25-182)||(48526565-48526723)
chr4 (59-182)||(18751602-18751725)
chr4 (59-182)||(54995072-54995195)
chr4 (25-182)||(4219943-4220101)
chr4 (59-184)||(25938090-25938215)
chr4 (59-184)||(33109883-33110008)
chr4 (71-183)||(18763951-18764063)
chr4 (59-183)||(2118295-2118419)
chr4 (9-113)||(12503805-12503909)
chr4 (35-184)||(51021190-51021339)
chr4 (43-184)||(20958264-20958403)
chr4 (47-167)||(43281198-43281317)
chr4 (44-167)||(43243685-43243807)
chr4 (44-187)||(44890515-44890658)
chr4 (43-182)||(48713749-48713888)
chr4 (44-184)||(44892552-44892692)
chr4 (47-178)||(20957196-20957327)
chr4 (44-184)||(48293595-48293735)
chr4 (59-184)||(10258306-10258431)
chr4 (68-184)||(35363028-35363145)
chr4 (57-182)||(16690939-16691064)
chr4 (44-184)||(48294946-48295087)
chr4 (25-168)||(12503453-12503597)
chr4 (57-184)||(48708296-48708423)
chr4 (113-184)||(16318249-16318320)
chr4 (57-184)||(16691489-16691615)
chr4 (44-127)||(43242328-43242411)
chr4 (9-76)||(18751971-18752038)
chr4 (77-184)||(55189529-55189636)
chr4 (44-124)||(44220781-44220861)
chr4 (9-184)||(17503975-17504149)
chr4 (9-49)||(17504329-17504369)
chr4 (9-49)||(35193443-35193483)
chr4 (47-182)||(55191181-55191318)
chr4 (59-186)||(23986519-23986646)
chr4 (58-184)||(30597939-30598064)
chr4 (134-184)||(55677453-55677503)
chr4 (9-42)||(40160236-40160269)
chr4 (134-183)||(44219377-44219426)
chr4 (132-184)||(12593516-12593568)
[»] scaffold0007 (3 HSPs)
scaffold0007 (9-184)||(64303-64478)
scaffold0007 (70-182)||(64735-64847)
scaffold0007 (9-183)||(205738-205911)
[»] scaffold1223 (2 HSPs)
scaffold1223 (9-183)||(755-928)
scaffold1223 (59-184)||(1160-1285)
[»] scaffold0432 (2 HSPs)
scaffold0432 (9-182)||(10242-10414)
scaffold0432 (78-182)||(9935-10039)
[»] scaffold0027 (2 HSPs)
scaffold0027 (9-184)||(42528-42702)
scaffold0027 (16-182)||(42172-42339)
[»] scaffold0417 (2 HSPs)
scaffold0417 (9-166)||(10640-10797)
scaffold0417 (59-184)||(11042-11167)
[»] scaffold0176 (2 HSPs)
scaffold0176 (18-184)||(18836-19001)
scaffold0176 (88-184)||(19069-19165)
[»] scaffold0113 (1 HSPs)
scaffold0113 (59-181)||(28662-28784)
[»] scaffold1585 (1 HSPs)
scaffold1585 (43-185)||(567-709)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-113)||(16568-16672)
scaffold0157 (25-168)||(16880-17024)
[»] scaffold1696 (1 HSPs)
scaffold1696 (44-181)||(454-589)
[»] scaffold0057 (2 HSPs)
scaffold0057 (44-182)||(61862-62000)
scaffold0057 (115-184)||(61029-61098)
[»] scaffold0076 (1 HSPs)
scaffold0076 (82-182)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (43-130)||(7691-7778)


Alignment Details
Target: chr5 (Bit Score: 161; Significance: 1e-85; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 267 - 427
Target Start/End: Complemental strand, 28211435 - 28211275
Alignment:
Q  267 tttaaggttgatgacaagtaccaatactcaagtgagaacataaaccttaaggttcatggatggataagtgcagagtctgaaacaattccagcaacaggtt 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28211435 tttaaggttgatgacaagtaccaatactcaagtgagaacataaaccttaaggttcatggatggataagtgcagagtctgaaacaattccagcaacaggtt 28211336  T
Q  367 tttgggtaatcatacctagcaatgaatttcgatcaggtggtcttgttaaacagaatcttac 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28211335 tttgggtaatcatacctagcaatgaatttcgatcaggtggtcttgttaaacagaatcttac 28211275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 2865124 - 2865299
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 2865299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 18183338 - 18183513
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 18183513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 5819298 - 5819473
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5819473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 8647614 - 8647439
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8647439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 19359312 - 19359137
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagc 19359137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 24362205 - 24362380
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| || ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 24362380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 15709146 - 15708972
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagc 15708972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 8461106 - 8460931
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagc 8460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 29455111 - 29455286
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29455210  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29455211 attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagc 29455286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 14215616 - 14215787
Alignment:
Q  13 tagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttt 112  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  113 tattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    | |||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagc 14215787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 15372242 - 15372415
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||||||||||||| ||||||||||||||||||| || |||||||||||  |||| || ||||||||||||||||||||| ||||||||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggacc 15372341  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15372342 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 164560 - 164735
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| ||||||||| |||||| |||||||||| ||||| ||||| | |||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagc 164735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18183131 - 18182973
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | | | |||||| | || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 18182973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 5819090 - 5818932
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24361997 - 24361843
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttta 124  Q
    |||||||  |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  125 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 179  Q
     |||||||||| |||||||||| ||||||||||||| | ||||||||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 19359555 - 19359680
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  19359555 aaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 19359654  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||    
T  19359655 cacgaggaccaaaagtgtaattaagc 19359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 8647822 - 8647982
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| |  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8647982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 14463901 - 14464064
Alignment:
Q  20 taggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctg 119  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| |||||| ||||     
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggg-taggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  120 ttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||| ||  |  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagc 14464064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 2864915 - 2864756
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 16018763 - 16018590
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||| |||   ||||| |||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||| |||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 16018590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24325372 - 24325218
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttta 124  Q
    |||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  125 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 179  Q
     |||||||||| |||||||||| ||||||||||||| | ||||||||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 25000266 - 25000112
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | ||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc 25000167  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacga 163  Q
     |||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  25000166 attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 14215402 - 14215243
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 24331929 - 24332107
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacg-aaaaatgcaac-aaaaatgataattgaagga 106  Q
    |||||||||| |||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  107 ccgttttattctgtttt-aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc-aaaagtgtaattaag 183  Q
    ||||||| ||||||||| |||| |||| || |||||||||||||| ||||||||| || |||| |||||||||||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 8461323 - 8461475
Alignment:
Q  33 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggc 131  Q
    ||||||||||||||||| | |||  | ||||| || |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||    
T  8461323 gtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgttttaaaagagc 8461422  T
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8461423 aggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8461475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 25000471 - 25000633
Alignment:
Q  23 gtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtt 121  Q
    ||||||||| ||||||||||||||||||| |||  | ||||| || ||| |||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  122 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||  |||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagc 25000633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 29454901 - 29454741
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagc 29454741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 164343 - 164192
Alignment:
Q  33 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggc 131  Q
    ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||| ||||||||||| ||||||||| || |||| |||||||||    
T  164343 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttataaaagggc 164245  T
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  164244 aggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 164192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 16018969 - 16019129
Alignment:
Q  23 gtctaaaacggtcatttctctgcgttttttgagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtt 121  Q
    ||||||||| ||||||||||||||||| | |||  ||||| | || ||||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  122 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||| ||| ||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaa 16019129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 24331722 - 24331560
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaat--gataattgaaggaccgttttattctgtt 121  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || | ||||| |||||||||||||||||   |||||||||||||||||||| |||||||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  122 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagc 24331560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 7349420 - 7349561
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagttt 142  Q
    ||||||||| ||| | |||||||||||||||| ||||| ||||||||||||||||| |||||||  ||||| || ||||||||||| ||| ||||| |||    
T  7349420 tgcgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaattt 7349519  T
Q  143 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  7349520 cgtgagtagaccaaaacacgaggaccaaaagtgtaattaagc 7349561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 4222147 - 4222266
Alignment:
Q  65 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgag 164  Q
    |||||||||||||||||||||| ||||||||||| |||| |||  |||| |||||||||||||||||||||||| ||||||||| || ||||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  165 gaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||    
T  4222247 gaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 15709353 - 15709512
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| |||||||||||||| || | |||  | ||||| || ||||||||||||||||||||| ||||||||| | |||||||||||| |||||||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||||||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagc 15709512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 7348685 - 7348560
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    |||||||||||||||||||||| |||||||||||||||||  ||||||  ||||| |||||||||||||||||| ||||| |||||||||||| | ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    || ||||||||||| |||||||||||    
T  7348585 catgaggaccaaaaatgtaattaagc 7348560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 15371983 - 15371873
Alignment:
Q  72 ggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaa 171  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||  ||||||||||| |||||| ||||||| ||||    
T  15371983 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaa 15371885  T
Q  172 agtgtaattaag 183  Q
    ||||||||||||    
T  15371884 agtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 184
Target Start/End: Complemental strand, 4219800 - 4219664
Alignment:
Q  47 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtg 146  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| | ||||||   ||| ||||||||||||| |||||||||| ||| ||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  147 agtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    | ||| |||||||||||||| |||||||||||||||||    
T  4219701 aatagcccaaaacacgaggatcaaaagtgtaattaagc 4219664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 45 - 184
Target Start/End: Complemental strand, 4623286 - 4623149
Alignment:
Q  45 cgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcg 144  Q
    ||||||| ||| |||||||||||  ||||||| ||||||| | ||||||||||||||||||||  |||| ||||||||||||  |||| ||||| |||||    
T  4623286 cgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcg 4623189  T
Q  145 tgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||| | |||||||||| ||||||||||||||||||||    
T  4623188 tgagtaagtcaaaacacgatgaccaaaagtgtaattaagc 4623149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 67 - 187
Target Start/End: Complemental strand, 6018431 - 6018312
Alignment:
Q  67 gggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgagga 166  Q
    ||||||||| |||| ||||||||||||||||||||||| |   |||| ||||||||||||||| |||||||||||||||||||||  ||||||||||| |    
T  6018431 gggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaa 6018333  T
Q  167 ccaaaagtgtaattaagcatt 187  Q
    |||||| ||||||||||||||    
T  6018332 ccaaaaatgtaattaagcatt 6018312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 6019177 - 6019309
Alignment:
Q  47 ttttttgagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgt 145  Q
    ||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||| || ||| ||||| |||||||||||||| ||| || |||||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  146 gagtaggccaaaacacgaggaccaaaagtgtaat 179  Q
    ||||| ||||||||| || |||||||| ||||||    
T  6019277 gagta-gccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 4624642 - 4624757
Alignment:
Q  57 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaa 156  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||| || |||||||||  | |||||||| |||||||||||||  ||    
T  4624642 ataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtaggttaa 4624741  T
Q  157 aacacgaggaccaaaa 172  Q
    ||||||||||| ||||    
T  4624742 aacacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 13814131 - 13814190
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaa 103  Q
    ||||||||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  13814131 tgcgtttttggaggataaaatgggg-gtaggacgaaaagtgcaacaaaaatgataattgaa 13814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 14462730 - 14462686
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaa 103  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 16752757 - 16752717
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||  |||||||| |||||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgttt 16752717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 160; Significance: 4e-85; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 4969 - 4794
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 5222 - 5334
Alignment:
Q  71 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaa 170  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  5222 aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaa 5321  T
Q  171 aagtgtaattaag 183  Q
    |||||||||||||    
T  5322 aagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 4e-85; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 10900299 - 10900474
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 10900474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 15828010 - 15828185
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15828185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 20741276 - 20741101
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 20741101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 11276951 - 11277126
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 11277126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 18257313 - 18257138
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagc 18257138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 11445163 - 11444988
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11444988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 1149802 - 1149976
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttg-agaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 109  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  110 ttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagc 1149976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 31470685 - 31470862
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| ||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcat 186  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagcat 31470862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 2319832 - 2319673
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttta 124  Q
    |||||||  |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  125 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagc 2319673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 12935528 - 12935701
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  111 tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| |||||||||| || |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagc 12935701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 28472812 - 28472638
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| ||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagc 28472638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 29860001 - 29859827
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| ||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagc 29859827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||| ||||||||||| |||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgttttg-gagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| ||||||||||||| |||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10900109 - 10899942
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttta 114  Q
    |||||||||||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||     
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 10900010  T
Q  115 ttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10900009 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 18505288 - 18505463
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||| | |||||| ||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| || ||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 12935318 - 12935158
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 12935158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 23075512 - 23075672
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||| ||||| |||  ||||| | || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 23075672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 4811535 - 4811373
Alignment:
Q  22 ggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtt 121  Q
    |||||||||| || |||| |||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  122 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagc 4811373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 11445371 - 11445531
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11445531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 22219737 - 22219897
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| |||||||||||| |||| | |||  | ||||| || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 22219897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 23074164 - 23074000
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||  |||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||           ||||||||||||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatg-----------ataattgaaggacc 23074076  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23074075 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 23074000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 31470476 - 31470316
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||| ||||||||| ||| ||||| |||||||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 31470316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 18505045 - 18504922
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  18505045 aaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaa 18504946  T
Q  159 cacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||    
T  18504945 cacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 18257565 - 18257681
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 167  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  168 caaaagtgtaattaagc 184  Q
    ||||||| |||||||||    
T  18257665 caaaagtataattaagc 18257681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 20741493 - 20741648
Alignment:
Q  33 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaa---atgataattgaaggaccgttttattctgttttaaaag 128  Q
    ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||| ||||   |||||||||||||||||||||| ||||||||||||||    
T  20741493 gtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgttttaaaag 20741592  T
Q  129 ggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| || |||||||||||||||||||||||||||||||||| |||||||||||||    
T  20741593 ggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagc 20741648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 11276760 - 11276591
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttta 114  Q
    |||||||| ||||||| ||||||||||||||||||| |||  | ||||| || |||||||||||||||| ||||||||||| |||||||||||| ||||     
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttg 11276661  T
Q  115 ttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||| | || ||||||| ||||||| |||||||||| |||| ||| ||||||||||||    
T  11276660 ttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagc 11276591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 29033577 - 29033436
Alignment:
Q  43 tgcgttttttgag-aataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtt 141  Q
    ||||||||| ||| || |||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||| ||    
T  29033577 tgcgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatt 29033478  T
Q  142 tcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  29033477 tcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 43 - 183
Target Start/End: Original strand, 29035040 - 29035180
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagttt 142  Q
    ||||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||| | ||||||  |||| ||||||||||||||||||| |||| |||    
T  29035040 tgcgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaattt 29035139  T
Q  143 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  29035140 cgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 4811675 - 4811800
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||||||| ||||||||||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| ||||||| |||||||||    
T  4811775 cacgaggatcaaaagtataattaagc 4811800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 15827766 - 15827639
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt--tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaa 156  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||  ||| || |||||||||||| ||  |||||||||||||||| |||||    
T  15827766 aaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaa 15827667  T
Q  157 aacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||||    
T  15827666 aacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 3835143 - 3835268
Alignment:
Q  57 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaa 156  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||  |||| ||||||||||||  |||| ||||| ||||||||||||| |||    
T  3835143 ataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaa 3835242  T
Q  157 aacacgaggaccaaaagtgtaattaa 182  Q
    |||||  |||||||||||||||||||    
T  3835243 aacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 18296285 - 18296146
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||  | || |||     
T  18296285 gcgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaatttt 18296187  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| | |||||||||||||| |||| | |||||||||    
T  18296186 gtgagtaagtcaaaacacgaggactaaaattataattaagc 18296146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 97 - 184
Target Start/End: Complemental strand, 1149553 - 1149466
Alignment:
Q  97 aattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 1149466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 22534214 - 22534269
Alignment:
Q  129 ggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| ||||| |||||||||| || ||||| |||||||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagc 22534269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 35163557 - 35163639
Alignment:
Q  10 gcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaa 92  Q
    |||||||||||||| ||||||| |||||||||||| |||||| |||   ||||| || |||||||| |||| ||||| |||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 6e-84; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 19830596 - 19830423
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 19830423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 19590701 - 19590526
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19590526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 37786943 - 37786768
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 37786768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 32004985 - 32005158
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  111 tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| |||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagc 32005158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 35289272 - 35289445
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  111 tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35289445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 38858819 - 38858644
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 38858644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 2659211 - 2659384
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  111 tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| |||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||| |||||||||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagc 2659384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 29100220 - 29100393
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 34534162 - 34534335
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||| |||||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  111 tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| |||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagc 34534335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 4641616 - 4641443
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||| |||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| || ||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 4478076 - 4478242
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttat 115  Q
    |||||||||||||||| || |||||||||||||||| |||||||||||| ||| || |||||||||||||||||||||||||||||||||||  | ||||    
T  4478076 ggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttat 4478175  T
Q  116 tctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  4478176 tctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaa 4478242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 23953105 - 23953268
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttat 115  Q
    |||||| ||||||||| || |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  23953105 ggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 23953204  T
Q  116 tctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 179  Q
    |||||||| |||||||  ||||||||||||||||||  ||||||||||||||||||| ||||||    
T  23953205 tctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 19590909 - 19591069
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagc 19591069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 34533944 - 34533792
Alignment:
Q  33 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggc 131  Q
    ||||||||||||||||||| |||  | ||||| || ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||    
T  34533944 gtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgttttaaaagagc 34533845  T
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34533844 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 34533792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 38859025 - 38859185
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 38859185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 2659000 - 2658840
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| | ||||||||||||||||| |||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagc 2658840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 32004774 - 32004615
Alignment:
Q  26 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttta 124  Q
    |||||| ||||||||||||||||| | |||  | ||||| || |||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  125 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| || || |||||||||||||||||||||||||||||||||||||||||||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 32004615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 37787153 - 37787311
Alignment:
Q  27 aaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaa 125  Q
    ||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  126 aagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagc 37787311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 47 - 184
Target Start/End: Complemental strand, 28583577 - 28583440
Alignment:
Q  47 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtg 146  Q
    ||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||  |||| | || ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  147 agtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28583477 agtaggccaaaacacgaggaccaaaagtgtaattaagc 28583440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 35289019 - 35288904
Alignment:
Q  69 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 168  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  35289019 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgacc 35288920  T
Q  169 aaaagtgtaattaagc 184  Q
    ||||||||||||||||    
T  35288919 aaaagtgtaattaagc 35288904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 23952848 - 23952731
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagta-ggccaaaacacgagga 166  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  23952848 ggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgagga 23952749  T
Q  167 ccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||    
T  23952748 ccaaaagtgtaattaagc 23952731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 29099976 - 29099863
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  29099976 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaa 29099877  T
Q  159 cacgaggaccaaaa 172  Q
    ||||||||||||||    
T  29099876 cacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 43 - 184
Target Start/End: Complemental strand, 38161093 - 38160952
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagttt 142  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||||| ||  | |||    
T  38161093 tgcgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattatttt 38160994  T
Q  143 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  38160993 cgtgagtaggccaaaacccgaggaccaaaagtgtaattaagc 38160952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 28584326 - 28584466
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||| ||||||||||||||| |||||||| ||||    
T  28584326 gcgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| ||||||||| ||||||||| ||||||||||||||||    
T  28584426 gtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| ||  ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||| || |||||||   |||||||||||||||||||||||||||||||||||||||    
T  4641928 aaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 19830804 - 19830963
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| |||||||||||| |||| | |||  | ||||| || |||||||| |||||||||||||||||||||||||||| |||||||| || ||||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19830963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 35579256 - 35579431
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| || ||||| |||||||||| |||   ||||| || |||| ||| |||| ||||| ||| |||||| ||  |||||     
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 35579354  T
Q  109 gttttattctgttttaaaag-ggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagca 185  Q
    ||||| || || ||| |||| ||||| | || |||||||||  |  |||||  |||||| ||||||||||||||||||    
T  35579355 gttttgtt-tgatttgaaagaggcataatcattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaagca 35579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 32427397 - 32427432
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttt 51  Q
    |||||||||||||||| |||||||||||||||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 49064084 - 49064035
Alignment:
Q  135 accagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||||||||  || ||||| |||||||||||||||||||||||||    
T  49064084 accattttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaagc 49064035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 787281 - 787329
Alignment:
Q  134 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||||||| || ||||| ||||| |||||||||||||||||    
T  787281 gaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35579074 - 35579034
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttt 49  Q
    |||||||||| |||||||||||  |||||||||||||||||    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgttt 35579034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 39137014 - 39137078
Alignment:
Q  121 tttaaaag-ggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| |||| ||||| |||||||||  || ||||| ||||||| |||||||||||||||||    
T  39137014 tttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagc 39137078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 1e-82; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 50970647 - 50970822
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 50970822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 5540194 - 5540362
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttat 115  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttct 5540293  T
Q  116 tctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5540294 tctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5540362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 29307122 - 29306954
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttat 115  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 29307023  T
Q  116 tctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29307022 tctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 29306954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 18984295 - 18984120
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagc 18984120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 29869796 - 29869621
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagc 29869621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 5962947 - 5963120
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 33144288 - 33144462
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
     |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||  ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 15646571 - 15646739
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttat 115  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 15646670  T
Q  116 tctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15646671 tctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15646739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 17433392 - 17433217
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagc 17433217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 21856412 - 21856587
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||| |||| || ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 21856587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 8678911 - 8679085
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8679085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 9019149 - 9018974
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| |||||||   | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagc 9018974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 39154195 - 39154021
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| | |||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||||||||| || |||||||||||||||||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 26859431 - 26859603
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||| ||||||||||||||  | |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  111 tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     || |||||||||||||||||| ||  |||||||||||||| |||||||||||||| |||||||||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagc 26859603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 29307317 - 29307486
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttta 114  Q
    |||||||||||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||     
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 29307416  T
Q  115 ttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  29307417 ttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagc 29307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 17433597 - 17433758
Alignment:
Q  23 gtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtt 121  Q
    ||||||||| ||||||||||||||||| |  ||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  122 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 8678658 - 8678540
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8678658 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 8678559  T
Q  168 caaaagtgtaattaagcat 186  Q
    |||||||||||||||||||    
T  8678558 caaaagtgtaattaagcat 8678540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 29870003 - 29870163
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| |  ||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 29870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 4636363 - 4636518
Alignment:
Q  33 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggc 131  Q
    ||||||||||||||||| | |||  | ||||| || ||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  4636363 gtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaagggc 4636462  T
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatt 187  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4636463 aggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatt 4636518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 5539942 - 5539815
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  5539942 aaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 5539843  T
Q  159 cacgaggaccaaaagtgtaattaagcat 186  Q
    ||||||||||||||||||||||||||||    
T  5539842 cacgaggaccaaaagtgtaattaagcat 5539815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 50970437 - 50970279
Alignment:
Q  27 aaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaa 125  Q
    ||||| ||||||||||||||||| | |||  | ||||| |  |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  126 aagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 50970279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 18984538 - 18984663
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  18984538 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 18984637  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||| ||||||||||||||||||||||    
T  18984638 cacaaggaccaaaagtgtaattaagc 18984663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 33144078 - 33143925
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 177  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 15173478 - 15173637
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15173578 aaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15173637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 15646309 - 15646193
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 167  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15646309 ggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 15646210  T
Q  168 caaaagtgtaattaagc 184  Q
    ||||||| |||||||||    
T  15646209 caaaagtataattaagc 15646193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 21856203 - 21856044
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 39154439 - 39154564
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||| |||||||||||||||||||||||||    
T  39154439 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaa 39154538  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||    
T  39154539 cacgaggaccaaaagtgtaattaagc 39154564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 26859176 - 26859060
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||||||||| |||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  168 caaaagtgtaattaagc 184  Q
    |||||||||||||||||    
T  26859076 caaaagtgtaattaagc 26859060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 9019338 - 9019507
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttta 114  Q
    |||| ||||||||||| || |||||||||||||| | | |  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||     
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 9019437  T
Q  115 ttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||| ||||  |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  9019438 ttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 9019507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 45 - 184
Target Start/End: Complemental strand, 52268430 - 52268291
Alignment:
Q  45 cgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcg 144  Q
    ||||||| ||| | |||||||||||||||||||||| ||||||||||||||||| |||| ||| ||||| |||||||||||||||||| ||||| |||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  145 tgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  52268330 tgagcaggccaaaatacgaggaccaaaagtgtaattaagc 52268291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 4636146 - 4636033
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||     
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg- 4636048  T
Q  111 tttattctgttttaa 125  Q
    ||| |||||||||||    
T  4636047 tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 5962704 - 5962579
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  |||||||||||||| ||| ||| ||    
T  5962704 aaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataa 5962605  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||| |||||||||||    
T  5962604 cacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 17112407 - 17112283
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||||||||| | |||| |||| |||||||  |||||    
T  17112407 aaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctattttaaaagggcct-accaatttcatgagtagatcaaaa 17112309  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    || ||| |||||||||||||||||||    
T  17112308 catgagaaccaaaagtgtaattaagc 17112283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  69 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 168  Q
    |||||||||||| ||||||||||||||||| |||| |||  |||| ||||||||||||||||||  |||  |||| |||||| | |||||||||||||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  169 aaaagtgtaattaag 183  Q
    |||||||||||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 2733416 - 2733501
Alignment:
Q  99 ttgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||| || ||||||||||||| |||||||||||| |||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagc 2733501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 47827029 - 47826961
Alignment:
Q  120 ttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatta 188  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  47827029 ttttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagtatta 47826961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 47827033 - 47827125
Alignment:
Q  85 aacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 177  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||| |  || ||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 50304492 - 50304441
Alignment:
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||| |||||||||| || |||||  |||||||||||||||||||||||    
T  50304492 atgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 50304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 17088516 - 17088550
Alignment:
Q  15 gggggtaggtctaaaacggtcatttctctgcgttt 49  Q
    ||||||||||||||||| |||||||||||||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 17641862 - 17641912
Alignment:
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||| |||||||||| || |||||  ||||||||||||||||||||||    
T  17641862 atgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 44802591 - 44802716
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||||| || |||| ||||| ||| |||||| || | ||||  |||| ||| |||| |||  |||||||||| |||||||||  || |||||    
T  44802591 aaaataggaggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaa 44802690  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
      | ||||||||||||||||||||||    
T  44802691 tgcaaggaccaaaagtgtaattaagc 44802716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 50419725 - 50419805
Alignment:
Q  104 ggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||| |||  |||||||| |||| ||||| |||||||||| || | |||  ||| ||||||||||| ||||||||    
T  50419725 ggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaagc 50419805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 2e-81; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 5137156 - 5136983
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 5136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 41046876 - 41046703
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 39555946 - 39556121
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 39556121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 31779021 - 31779196
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31779196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 20840734 - 20840561
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  111 tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| |||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 20840561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 24300925 - 24301100
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| || |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 24301100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 37727105 - 37726930
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| || |||||||||||||||  ||||||||||| || || ||||||||||||||||||||||||||||||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagc 37726930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 23644638 - 23644463
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 23644463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 30104657 - 30104483
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| |||| ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 30104483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 43973610 - 43973442
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttat 115  Q
    |||||||||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  43973610 ggggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 43973511  T
Q  116 tctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||| | || ||||||||||||| |||||||||||||||||||||||||||||||    
T  43973510 tctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagc 43973442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 25853596 - 25853770
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
     |||| ||||||||||||| | || ||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| |||||||   | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 181  Q
    ||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 48453141 - 48452990
Alignment:
Q  33 gtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggca 132  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  48453141 gtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggca 48453042  T
Q  133 tgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  48453041 ggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagc 48452990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 32535330 - 32535507
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaat-----gataattgaagg 105  Q
    |||||||| ||||||||||||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||     ||||||||||||    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  106 accgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 32535507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 27393946 - 27394121
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 27394121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 26274936 - 26275108
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||| | ||||||||||||||||||| |||||||| ||| |||||| | |||||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaa 26275108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 26837725 - 26837899
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||| |||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 26837899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 17464860 - 17465036
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgataattgaaggac 107  Q
    |||||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  108 cgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||| |||| |||||||||||   |||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  17464960 cgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagc 17465036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 4275748 - 4275908
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4275908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 37727314 - 37727474
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagc 37727474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 43973824 - 43973984
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | | | || ||||| || |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 43973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 17464617 - 17464492
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  17464617 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaa 17464518  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||    
T  17464517 cacgaggaccaaaagtgtaattaagc 17464492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 20840945 - 20841105
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagc 20841105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 25853395 - 25853235
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| || |||||||||||||| | |||  | ||||| || ||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 25853235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 27393822 - 27393662
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | | |  | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 27393662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 39555739 - 39555579
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 39555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 31778814 - 31778654
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagc 31778654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 25612381 - 25612519
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||| ||||||||||||| ||||| ||||    
T  25612381 gcgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  25612481 gtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 29801798 - 29801960
Alignment:
Q  23 gtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtt 121  Q
    ||||||||  ||||||||||||||||| | |||  | ||||| || ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  122 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagc 29801960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 30098182 - 30098307
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||| | |||||    
T  30098182 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaa 30098281  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||    
T  30098282 cacgaggaccaaaagtgtaattaagc 30098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 32535085 - 32534962
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||| |||||||    
T  32535085 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaa 32534986  T
Q  159 cacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||    
T  32534985 cacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 5137365 - 5137525
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || | |||||| |||||||||||||||||||||||||||||||| |||| |||| ||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5137525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 23644849 - 23645009
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||  | |||  | ||||| || ||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagc 23645009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 29801477 - 29801357
Alignment:
Q  64 ggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacga 163  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  164 ggaccaaaagtgtaattaagc 184  Q
     ||||||||||||||||||||    
T  29801377 tgaccaaaagtgtaattaagc 29801357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 23228414 - 23228551
Alignment:
Q  46 gttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgt 145  Q
    |||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||  |||| ||| ||||||||||||||||| || ||||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgt 23228512  T
Q  146 gagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  23228513 gagtaggccaaaacacggggaccaaaagtgtaattaagc 23228551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 50116812 - 50116953
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagttt 142  Q
    ||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||| ||| ||||||||||||||| |||    
T  50116812 tgcgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaattt 50116911  T
Q  143 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| | ||||||||||||| |||||||||||||||||    
T  50116912 cgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagc 50116953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 22424975 - 22424815
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||| ||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||| ||  ||||||||||| |||||||  ||||||||| |||||||||||||||||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagc 22424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 26837521 - 26837363
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||  || |||| |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||| ||||| ||||||||||||||||||| || |||||||||| |||||||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaa 26837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 37220698 - 37220558
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||| ||||||||  ||||||||||||||||||| |||||| |  | |     
T  37220698 gcgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 37220558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 26274693 - 26274570
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  26274693 aaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaa 26274594  T
Q  159 cacgaggaccaaaagtgtaattaa 182  Q
     || |||| ||||| |||||||||    
T  26274593 tacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 32697106 - 32697244
Alignment:
Q  45 cgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcg 144  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||| |||| | |||||    
T  32697106 cgtttttggaggataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcg 32697204  T
Q  145 tgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| |||||||||||||||||| | |||||||||    
T  32697205 tgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 24300717 - 24300560
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||| || |||||||||||||| || |||||||||||| |||||||| |||||||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 51474753 - 51474878
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| |||||||||||||||||||||||||||||||||| | ||||||  |||| || ||||||||||||||||||||| ||||||||||| |||||||    
T  51474753 aaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaa 51474852  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    |||| | |||||||||||||||||||    
T  51474853 cacgggaaccaaaagtgtaattaagc 51474878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 25420558 - 25420684
Alignment:
Q  57 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaa 156  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||| ||| || ||||||||||||| |||    
T  25420558 ataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaa 25420657  T
Q  157 aacacgaggaccaaaagtgtaattaag 183  Q
    || |||| || ||||||||||||||||    
T  25420658 aatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 41047083 - 41047239
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgtttt 41047181  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||| ||  |||||||||||||||||||||||||| || || | |||||||||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 51473542 - 51473426
Alignment:
Q  71 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaa 170  Q
    ||||| |||| |||||||||||||||||  |||||||  |||| |||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  171 aagtgtaattaagcatt 187  Q
    |||||||||||||||||    
T  51473442 aagtgtaattaagcatt 51473426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 45966064 - 45965939
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    |||||||||| ||| ||||||||||||||| |||||||||| |||||||  |||| || ||||||||||| ||| ||  |  |||||||||| |||||||    
T  45966064 aaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaa 45965965  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||    
T  45965964 cacgaggaccaaaagtgtaattaagc 45965939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 18010157 - 18010271
Alignment:
Q  52 tgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtag 151  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||||||||||  ||  |||| |||||||||||||||||   |||| ||||||||||||    
T  18010157 tgaggataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtag 18010256  T
Q  152 gccaaaacacgagga 166  Q
     | |||||| |||||    
T  18010257 acgaaaacaggagga 18010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 37222030 - 37222115
Alignment:
Q  99 ttgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||  ||||| ||||||||||||| |||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  37222030 ttgaaggatggttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagc 37222115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 25419273 - 25419145
Alignment:
Q  58 taaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaa-ggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggcca 155  Q
    |||||||||||  ||||| |||| ||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||  || | ||||||||||| || |    
T  25419273 taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatttcgtgagtaagcta 25419174  T
Q  156 aaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| |||||||||| |||| ||||    
T  25419173 aaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 32695830 - 32695706
Alignment:
Q  58 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaa 157  Q
    ||||||| |||  ||||| |||| |||||||||||| ||||| | |||||  |||| ||||||||||||| | ||| | || |||||| |||||||||||    
T  32695830 taaaatgagggtaaggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaa 32695731  T
Q  158 acacgaggaccaaaagtgtaattaa 182  Q
    | | ||||||||||| |||||||||    
T  32695730 atatgaggaccaaaaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 49407972 - 49407797
Alignment:
Q  8 tagcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggac 107  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||   ||||| || |||| ||| |||| ||  ||||||   | | || | ||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggagttgaaaataggaggtatgactaaaactg-tacaaaacataaagtttagggac 49407874  T
Q  108 cgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     ||||| |||| ||| |||  |||||||||| |||||||||  || |||||  ||||||||||||||||||||||||    
T  49407873 ggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 49407797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 23227398 - 23227334
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggac 107  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||||||||| ||||| |||||    
T  23227398 tgcgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggac 23227334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 37075864 - 37075824
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgttt 37075824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 55192293 - 55192253
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttt 49  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgttt 55192253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatgggggg 69  Q
    |||||| | |||| ||||||||| ||||||||||||| |||||  ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 27200062 - 27200236
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||| | ||||||||||||||||| | |||   ||||| || |||| ||| |||| ||||| ||| |||||| ||  |||||     
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 27200160  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    || || |||  ||| |||  ||||  |||| |||||||||  || |||||  | ||||||||||||||||||||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagc 27200236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 36701466 - 36701640
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||| | ||||||| || |||| | |||   ||||| || |||| ||| |||| ||||| ||| |||||| || | |||      
T  36701466 agcatatggggtaggtctaaaactgccatttctatgtgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagggatg 36701565  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
     |||| |||  ||| |||  | |||||||| |||||||||  || |||||  |||||||||||||||||||||||    
T  36701566 attttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 52375826 - 52375876
Alignment:
Q  134 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||| || |||||  ||||||||||||||||||||||||    
T  52375826 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 52375876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 22370647 - 22370599
Alignment:
Q  134 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||||||| || |||||  ||||||||||||||||||||||    
T  22370647 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 49720854 - 49720906
Alignment:
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| |||||||||| || ||||| |  ||||||||||||||||||||||    
T  49720854 atgaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 49720906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 11090695 - 11090524
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  111 tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 11090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 40027316 - 40027141
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagc 40027141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 40815714 - 40815887
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40815887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 22374496 - 22374321
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| || ||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 22374397  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374396 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 22374321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 239528 - 239354
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  239428 gttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagc 239354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 18451200 - 18451375
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 18451375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 28616788 - 28616614
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttg-agaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 109  Q
    ||||||||||||||||||||| |  |||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  110 ttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 28616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 1978284 - 1978109
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagc 1978109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 43058509 - 43058334
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||| |||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagc 43058334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 3025641 - 3025472
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 179  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  12 atagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 111  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  112 ttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    || || | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 26538273 - 26538098
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| || |||||||||||| || ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 26538174  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    | ||| ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26538173 gctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 26538098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 26538454 - 26538623
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttta 114  Q
    |||||||||||||||| ||||||||||||||||| | | |  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 26538553  T
Q  115 ttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26538554 ttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 26538623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 8425736 - 8425902
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttat 115  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||| |    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgt 8425835  T
Q  116 tctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||| ||||||||||||| ||||| |||||||||||| ||||||||| || |||||||||||||||||    
T  8425836 tctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 20444890 - 20444750
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||    
T  20444890 gcgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  20444790 gtgagttggccaaaacacgaggaccaaaagtgtaattaagc 20444750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 22374709 - 22374869
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||| ||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 22374869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 35781067 - 35781207
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| ||||    
T  35781067 gcgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  35781167 gtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 40815506 - 40815347
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  ||||| | || ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 7446519 - 7446343
Alignment:
Q  11 catagggggtaggtctaaaa----cggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagga 106  Q
    ||||||||||| ||||||||    | ||||||||||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||| ||    
T  7446519 catagggggtatgtctaaaattaactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatga 7446421  T
Q  107 ccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| |||||||||||||||||| ||||| |||| ||||||| |||||||||||||| |||||||||||||||||    
T  7446420 ccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagc 7446343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 7446730 - 7446890
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||||| |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||||||||||||||| | ||||||||||||| ||||| |||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagc 7446890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 18450991 - 18450831
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||| |||||||||| |||||||||||||||||||||||||| |||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 18450831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 11090950 - 11091064
Alignment:
Q  70 taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 169  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090950 taggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 11091049  T
Q  170 aaagtgtaattaagc 184  Q
    |||||||||||||||    
T  11091050 aaagtgtaattaagc 11091064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 40027559 - 40027682
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  40027559 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 40027658  T
Q  159 cacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||    
T  40027659 cacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 20440451 - 20440575
Alignment:
Q  60 aaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaac 159  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  20440451 aaatgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaac 20440550  T
Q  160 acgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||||    
T  20440551 acgaggaccaaaagtgtaattaagc 20440575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 35779849 - 35779709
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||  |||| ||||||||||||| |||| ||||| ||||    
T  35779849 gcgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttc 35779750  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  35779749 gtgagtatgtcaaaacacgaggaccaaaagtgtaattaagc 35779709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 14432525 - 14432684
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 1978528 - 1978653
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||| ||||||||||||||||||||||    
T  1978628 cacaaggaccaaaagtgtaattaagc 1978653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 28617033 - 28617158
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  28617033 aaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaa 28617132  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||    
T  28617133 cacgaggaccaaaagtgtaattaagc 28617158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 239736 - 239896
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || |||| ||||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 28847123 - 28847239
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  168 caaaagtgtaattaagc 184  Q
    ||||| |||||||||||    
T  28847223 caaaaatgtaattaagc 28847239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 43058717 - 43058876
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 43058876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 8972378 - 8972239
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||| |||  |||| ||||||||| |||||||||||||| ||||    
T  8972378 gcgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttc 8972279  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| | ||||||||||||||||||||||||||||||||    
T  8972278 gtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 15551641 - 15551501
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagttt 142  Q
    ||||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||| || |||||||||| |||||||||| |||    
T  15551641 tgcgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccatttt 15551542  T
Q  143 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  15551541 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  26 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttta 124  Q
    |||||| ||||||||||||| ||| | |||  | ||||| || ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaag-accgttttgttctgtttta 8425416  T
Q  125 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||| || | ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 3025848 - 3026005
Alignment:
Q  26 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttta 124  Q
    |||||| ||||||||||||| ||| | |||  | ||||| || |||||||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  125 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||  |||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagc 3026005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 15552473 - 15552596
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| |||  |||| |||||||||||||||||  || || |||||||||||||||||||    
T  15552473 aaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaa 15552571  T
Q  159 cacgaggaccaaaagtgtaattaag 183  Q
    ||  | |||||||||||||||||||    
T  15552572 cattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 28143400 - 28143574
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||   ||||| ||  ||||||| |||| ||||| ||| |||||| || | ||||     
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 28143498  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| |||  ||| |||  |||| ||||| |||||||||  || |||||  ||||||||||||||| ||||||||    
T  28143499 attttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagc 28143574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 31797166 - 31797322
Alignment:
Q  27 aaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaa 126  Q
    ||||| ||||||||||||||||| | |||   ||||| || |||||||| |||| ||||| ||| || ||| || | |||| ||||| |||  ||| |||    
T  31797166 aaaactgtcatttctctgcgtttctagagttgaaaataggaggtaggactaaaactgcaaaaaacat-atagtttagggacggttttgttcgatttgaaa 31797264  T
Q  127 agggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
      |||||||||| |||||||||  || |||||   |||||||||||||||||||||||    
T  31797265 gaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagc 31797322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 4355808 - 4355756
Alignment:
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| ||||||||||||| |||||  | ||||||||||||||||||||||    
T  4355808 atgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagc 4355756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 42192738 - 42192788
Alignment:
Q  134 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||| || |||||  ||||||||||||||||||||||||    
T  42192738 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 42192788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 44220138 - 44220190
Alignment:
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| |||||||||| || |||||  ||||||| ||||||||||||||||    
T  44220138 atgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaagc 44220190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 148; Significance: 6e-78; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 134042 - 134217
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 134217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 6e-78; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 19176659 - 19176834
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19176834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 11656630 - 11656456
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttg-agaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccg 109  Q
    |||| |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 11656531  T
Q  110 ttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11656530 ttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11656456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 33328334 - 33328161
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 12572040 - 12571864
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggt-aggacgaaaaatgcaacaaaaatgataattgaaggac 107  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  108 cgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||| |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 12571864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 12 - 184
Target Start/End: Complemental strand, 41681306 - 41681135
Alignment:
Q  12 atagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 111  Q
    |||||||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  112 ttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 41681135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 13224816 - 13224645
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 9930026 - 9930201
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| |||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 9930201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 9178005 - 9178179
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||||||||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 9178179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 44831614 - 44831789
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 44831789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 31133396 - 31133221
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggact 31133297  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| || ||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagc 31133221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 13225023 - 13225183
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| | ||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 13225183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 19176443 - 19176291
Alignment:
Q  33 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggc 131  Q
    ||||||||||||||||| | |||  | ||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19176443 gtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 19176344  T
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19176343 aggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19176291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 4630161 - 4630328
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||      ||||||||||||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||| |||||||||||||||  ||| ||||| |||||||||||| ||||||||||| || |||||||||||||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 31133605 - 31133765
Alignment:
Q  26 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttta 124  Q
    |||||| ||||||||||||| ||| | |||  | ||||| || |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttta 31133704  T
Q  125 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagca 185  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31133705 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagca 31133765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 41681562 - 41681678
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  41681562 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggac 41681661  T
Q  168 caaaagtgtaattaagc 184  Q
    |||||||||||||||||    
T  41681662 caaaagtgtaattaagc 41681678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 44831408 - 44831248
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagc 44831248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 12572270 - 12572393
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||    
T  12572270 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaa 12572369  T
Q  159 cacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||    
T  12572370 cacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 34 - 184
Target Start/End: Original strand, 34540941 - 34541092
Alignment:
Q  34 tcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggca 132  Q
    |||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||    
T  34540941 tcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagca 34541040  T
Q  133 tgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34541041 ggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 34541092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 9929026 - 9928912
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  9929026 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggac 9928927  T
Q  168 caaaagtgtaattaa 182  Q
    |||||||||||||||    
T  9928926 caaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 11656876 - 11657001
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |  |||||||||||||||||||||||||    
T  11656876 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaa 11656975  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||    
T  11656976 cacgaggaccaaaagtgtaattaagc 11657001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 33743082 - 33742923
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | | | || ||||| || |||||||||||||||||| ||||||||||||||||| ||||||||  |||||||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgtttg-ttctgtttt 33742984  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagc 33742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| | ||||||||||||||| | |||  | |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 33743290 - 33743411
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||| ||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgt 33743389  T
Q  111 tttattctgttttaaaagggca 132  Q
    ||| ||||||||||||| ||||    
T  33743390 tttgttctgttttaaaaaggca 33743411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 11336959 - 11337066
Alignment:
Q  77 aaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgt 176  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  177 aattaagc 184  Q
    ||||||||    
T  11337059 aattaagc 11337066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 4629923 - 4629798
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||| |||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||| |||||||||||||| || |||||||    
T  4629923 aaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaa 4629824  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    |||||| |  ||||||| ||||||||    
T  4629823 cacgagaattaaaagtgcaattaagc 4629798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 8073956 - 8074095
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| |||  ||||||||||| |  |||| |||||||||||||| ||||||||||||||   |||| ||||||||||||||| ||||| || ||||    
T  8073956 gcgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttc 8074054  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||||||||||||||||||||||||| ||| |||||    
T  8074055 gtgaataggccaaaacacgaggaccaaaagtataactaagc 8074095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 10918264 - 10918129
Alignment:
Q  47 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtg 146  Q
    ||||| ||| ||||||||||||||| || |||||||||||||||||||||| |||||||||  ||||  ||||||||||   |||| ||||| |||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  147 agtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||  |||||||||||||| |||| |||||||||    
T  10918164 agtagatcaaaacacgaggacaaaaaatgtaattaa 10918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 43958326 - 43958264
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagga 106  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  43958326 gcgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 9177700 - 9177668
Alignment:
Q  152 gccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagc 9177668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 10919691 - 10919730
Alignment:
Q  145 tgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  10919691 tgagtaggtcaaaacacgaggaccaaaagtataattaagc 10919730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 35427308 - 35427357
Alignment:
Q  135 accagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||||||||| || |||||  ||||||||||||||||||||||||    
T  35427308 accattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 35427357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 28254921 - 28254973
Alignment:
Q  134 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcat 186  Q
    ||||| |||||||||| || |||||  | ||||||||||||||||||||||||    
T  28254921 gaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcat 28254973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 146; Significance: 9e-77; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 1841 - 1668
Alignment:
Q  11 catagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  111 tttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagc 1668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 2051 - 2211
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 2211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 144; Significance: 1e-75; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 4576 - 4751
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagc 4751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||| ||||| |||  | ||||| || ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  124 aaaagggcatgaccagtttcgtg 146  Q
    ||||||||| |||||||||||||    
T  4264 aaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 6e-75; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 33109860 - 33109686
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 46193774 - 46193948
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 11153516 - 11153691
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 11153691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 25447611 - 25447780
Alignment:
Q  15 gggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttta 114  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||     
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttg 25447710  T
Q  115 ttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25447711 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagc 25447780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 12234505 - 12234330
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagc 12234330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 15523603 - 15523778
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
     |||| || ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagc 15523778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 25937846 - 25937671
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagc 25937671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 38962195 - 38962362
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttat 115  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 38962294  T
Q  116 tctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||  |||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  38962295 tctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 4219733 - 4219559
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| || | |||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 23494619 - 23494445
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 23494520  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    | ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  23494519 gctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 22434547 - 22434718
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22434646 gttttgttctg-tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 22434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 54995437 - 54995609
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||| ||||||||||||||  |||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggacc 54995535  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 54995609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 22170306 - 22170480
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| || |||||||||| |||| || || |||||| |||||| |||||||||||||||||||||||||||||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagc 22170480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 48526371 - 48526197
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||   |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagc 48526197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 51020973 - 51020798
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||||||||||| ||||||||| |||| |  ||||||||| ||||| |||||||||||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagc 51020798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 45082808 - 45082968
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 45082968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 2118665 - 2118837
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| || ||||||||||||  | |||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 45082606 - 45082435
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||  |||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||| |||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||| ||||||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaa 45082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 46193568 - 46193406
Alignment:
Q  23 gtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtt 121  Q
    ||||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  122 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 46193406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 22434340 - 22434180
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagc 22434180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 25447400 - 25447248
Alignment:
Q  33 gtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggc 131  Q
    ||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25447400 gtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggc 25447301  T
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25447300 aggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagc 25447248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 15523395 - 15523236
Alignment:
Q  26 taaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttta 124  Q
    |||||| ||||||||||||||||| | |||  | ||||| || ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  125 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 15523236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 23494872 - 23494987
Alignment:
Q  69 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  169 aaaagtgtaattaagc 184  Q
    ||||||||||||||||    
T  23494972 aaaagtgtaattaagc 23494987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 12234748 - 12234873
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  12234748 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaa 12234847  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||| |||||||||    
T  12234848 cacgaggaccaaaagtataattaagc 12234873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 11153307 - 11153147
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| ||||||||||||||||| | | |  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagc 11153147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 20470895 - 20471055
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    |||||||  |||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagc 20471055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 48526565 - 48526723
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| |||||||||||| |||| | |||  | ||||| || |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 18751725 - 18751602
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  18751725 aaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaa 18751626  T
Q  159 cacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||    
T  18751625 cacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 54995195 - 54995072
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||| |    
T  54995195 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaata 54995096  T
Q  159 cacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||    
T  54995095 cacgaggaccaaaagtgtaattaa 54995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 4219943 - 4220101
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| || ||||||||||||||||  ||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4220101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 25938090 - 25938215
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  25938090 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 25938189  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||| ||||||||||||||||||||||    
T  25938190 cacaaggaccaaaagtgtaattaagc 25938215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 33109883 - 33110008
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||||| |||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    || |||||||||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagc 33110008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 18763951 - 18764063
Alignment:
Q  71 aggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaa 170  Q
    ||||||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  171 aagtgtaattaag 183  Q
    |||||||||||||    
T  18764051 aagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 59 - 183
Target Start/End: Complemental strand, 2118419 - 2118295
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||  |||| || ||||||||||||||| ||||| |||||||||||||||||||    
T  2118419 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 2118320  T
Q  159 cacgaggaccaaaagtgtaattaag 183  Q
    ||| |||||||||||||||||||||    
T  2118319 cacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 12503805 - 12503909
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  109 gtttt 113  Q
    |||||    
T  12503905 gtttt 12503909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 184
Target Start/End: Original strand, 51021190 - 51021339
Alignment:
Q  35 catttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcat 133  Q
    ||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||| |||||||| |||||||||||| || |||||||||||||||     
T  51021190 catttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgttttaaaagggcag 51021288  T
Q  134 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  51021289 gaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 51021339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 20958264 - 20958403
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagttt 142  Q
    ||||||||| ||| |||||||||||| |||||| |||||||||||||||||||||||||||||||   ||| |||||||||||||||||| ||||| |||    
T  20958264 tgcgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccatttt 20958361  T
Q  143 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  20958362 cgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 43281198 - 43281317
Alignment:
Q  47 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtg 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||  |||| ||||||||||||| |||||||||| |||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  147 agtaggccaaaacacgaggac 167  Q
    |||||||||||||||||||||    
T  43281297 agtaggccaaaacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 43243685 - 43243807
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||  |||| |||||||||||||||||||||||| ||||    
T  43243685 gcgtttttggaggataaaatgggg-gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  144 gtgagtaggccaaaacacgaggac 167  Q
    ||||||||||||||||||||||||    
T  43243784 gtgagtaggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 44890658 - 44890515
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||||  |||||| |||||   |||| |||||||||||||||||||||||| ||||    
T  44890658 gcgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttc 44890559  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagcatt 187  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||    
T  44890558 gtgaataggtcaaaacacaaggaccaaaattgtaattaagcatt 44890515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 48713749 - 48713888
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagttt 142  Q
    ||||||||| ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| ||||||||| |||    
T  48713749 tgcgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccatttt 48713848  T
Q  143 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    | ||||||||| |||||||||| |  ||||||||||||||    
T  48713849 catgagtaggctaaaacacgagaattaaaagtgtaattaa 48713888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 44892552 - 44892692
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||||  ||||||||| ||| ||||| ||||||||||||| ||||  |||| ||||    
T  44892552 gcgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttc 44892651  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||||||||||||||||| | |||||||||    
T  44892652 gtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 20957327 - 20957196
Alignment:
Q  47 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtg 146  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||  |||| || ||||||||||| | ||||||| |||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  147 agtaggccaaaacacgaggaccaaaagtgtaa 178  Q
    |||| |||||||| |||||||||||| |||||    
T  20957227 agtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 48293735 - 48293595
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||  |||| || |||||||||  | || || || ||||    
T  48293735 gcgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttc 48293636  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  48293635 gtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 48293595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 10258306 - 10258431
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||  ||  ||||| ||||||||||||||||| ||||| |||| ||||||||||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||    
T  10258406 cacgaggaccaaaagtgtaattaagc 10258431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 35363028 - 35363145
Alignment:
Q  68 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt-aaaagggcatgaccagtttcgtgagtaggccaaaacacgagga 166  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||| || | |||| ||||| |||  ||||||||||||||||||||||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  167 ccaaaagtgtaattaagc 184  Q
     |||||||||||||||||    
T  35363128 tcaaaagtgtaattaagc 35363145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 16691064 - 16690939
Alignment:
Q  57 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaa 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||   |||| || |||||||||  |||| ||||| ||||||||||||  |||    
T  16691064 ataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaa 16690965  T
Q  157 aacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||||||| |||||||||    
T  16690964 aacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 48294946 - 48295087
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacg-aaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagttt 142  Q
    |||||||| ||  |||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||| || |||||||||  |||| ||||| |||    
T  48294946 gcgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  143 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||  |||||||||| |||||||| |||||||||||    
T  48295046 cgtgagtagatcaaaacacgatgaccaaaaatgtaattaagc 48295087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 25 - 168
Target Start/End: Complemental strand, 12503597 - 12503453
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| || |||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 168  Q
    |||| |||  || |||||||||||||| | |||||||||||||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 57 - 184
Target Start/End: Complemental strand, 48708423 - 48708296
Alignment:
Q  57 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaa 156  Q
    |||||||| | |||||||  | ||||||||||||||||||||||||||||| ||||| || ||||||||||||||| || || |||||||  ||||||||    
T  48708423 ataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaa 48708324  T
Q  157 aacacgaggaccaaaagtgtaattaagc 184  Q
    |||||  |||||||||||||||||||||    
T  48708323 aacacatggaccaaaagtgtaattaagc 48708296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 16318249 - 16318320
Alignment:
Q  113 tattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  16318249 tattctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 16318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 16691489 - 16691615
Alignment:
Q  57 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaa 156  Q
    |||||||||| |||| ||||||||||||||||||||| |||||| ||||||  |||| || || ||||||  |||| ||||| ||||||||||||| |||    
T  16691489 ataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatg-tttaaagaggcaggaccattttcgtgagtaggtcaa 16691587  T
Q  157 aacacgaggaccaaaagtgtaattaagc 184  Q
    |||||  ||| |||||||||||||||||    
T  16691588 aacacagggatcaaaagtgtaattaagc 16691615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 43242411 - 43242328
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaa 127  Q
    |||||||| ||  ||||||| || ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||    
T  43242411 gcgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 18751971 - 18752038
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacg 76  Q
    ||||||||||||||||||||||| || |||||||||| ||||| ||||||||||| ||||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggacg 18752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 55189636 - 55189529
Alignment:
Q  77 aaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgt 176  Q
    ||||||| | ||||||||||||||||| |||  |||| |||| |||||||||||||| |||| |||  ||| |||| ||||||||||||| ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  177 aattaagc 184  Q
    ||||||||    
T  55189536 aattaagc 55189529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 44220781 - 44220861
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttta 124  Q
    |||||||| ||| |||||||  ||||||| |||||||||| |||||||||||||| ||||||||  |||| ||||||||||    
T  44220781 gcgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 17504149 - 17503975
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||| ||||| | |||   ||||| || |||||||| |||| ||||| ||| |||||| ||  |||||     
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacg 17504051  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||| | |||  ||| |||  |||| ||||| |||||||||  || |||||  |||||||||| ||| |||||||||    
T  17504050 gttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagc 17503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttt 49  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttt 49  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 182
Target Start/End: Original strand, 55191181 - 55191318
Alignment:
Q  47 ttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatga---taattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    ||||| ||| ||||||||  || ||| ||||||| ||||||||||||||   ||||| || |||  ||||||||| |||||||| |||||||||| ||||    
T  55191181 tttttagaggataaaatgatggttagaacgaaaagtgcaacaaaaatgatagtaattaaaagacaattttattctattttaaaa-ggcatgaccattttc 55191279  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
     |||||| | ||||||||||  ||||||| | |||||||    
T  55191280 atgagtatgtcaaaacacgaaaaccaaaattataattaa 55191318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 23986646 - 23986519
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    |||||||||| |||||| |||| ||||| ||| |||||| || | |||| ||||| |||  ||| |||  | |||||||| |||||||||  || |||||    
T  23986646 aaaatgggggttaggactaaaactgcaaaaaacatgatagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaa 23986547  T
Q  159 cacgaggaccaaaagtgtaattaagcat 186  Q
       |||||||||||||| ||||||||||    
T  23986546 tgtgaggaccaaaagtgaaattaagcat 23986519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 184
Target Start/End: Original strand, 30597939 - 30598064
Alignment:
Q  58 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaaggg-catgaccagtttcgtgagtaggccaa 156  Q
    |||||| |||| |||||| |||| |||||||||||| |||||| | ||||  |||| ||| | |||||||| | ||  |||| || ||||||| || |||    
T  30597939 taaaataggggttaggaccaaaagtgcaacaaaaat-ataatttagggacgattttgttc-gatttaaaagagacagaaccaattccgtgagttggtcaa 30598036  T
Q  157 aacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||| ||||    
T  30598037 aacacgaggaccaaaagtgtaatcaagc 30598064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 55677453 - 55677503
Alignment:
Q  134 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| |||||||||| || ||||| || ||||||||||||||||||||||    
T  55677453 gaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagc 55677503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 40160269 - 40160236
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctc 42  Q
    ||||||||||||||||||||||| ||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctc 40160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 44219426 - 44219377
Alignment:
Q  134 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| |||||||||| ||  |||| ||||||||||||||||||||||||    
T  44219426 gaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaag 44219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 12593516 - 12593568
Alignment:
Q  132 atgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||| |||||||||| || |||||  | ||||||||||||||||||||||    
T  12593516 atgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 12593568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 140; Significance: 4e-73; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 64478 - 64303
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||| || || |||||||||||||| | |||||||||||||||||||||||||||||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagc 64303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 64735 - 64847
Alignment:
Q  70 taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 169  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  170 aaagtgtaattaa 182  Q
    |||||||||||||    
T  64835 aaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 205738 - 205911
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |||   ||||| ||  ||||||| |||| ||||| ||| |||||| || | ||||     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 205836  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| |||  ||| |||  |||| ||||| |||||||||| || |||||   |||||| |||||||||||||||    
T  205837 gttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 131; Significance: 8e-68; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 928 - 755
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||| ||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggacc 830  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 1160 - 1285
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  1160 aaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaa 1259  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||| ||||||||||||||||    
T  1260 cacgaggactaaaagtgtaattaagc 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 126; Significance: 8e-65; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||| |||||| ||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 10039 - 9935
Alignment:
Q  78 aaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 177  Q
    |||||| ||||||| |||||||||||||||| |||| |||| | ||||||||||| || ||||||||||| ||||| |||||||||||||||||| ||||    
T  10039 aaaatgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgta 9940  T
Q  178 attaa 182  Q
    |||||    
T  9939 attaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 121; Significance: 8e-62; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 42528 - 42702
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||| ||||||||||||||||||  | ||||||| ||||||| ||||||||||||| |||||||| |||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagc 42702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 42339 - 42172
Alignment:
Q  16 ggggtaggtctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttta 114  Q
    |||||||||||||||| ||||||||||||||||| |  ||  | ||||| || |||| ||| ||||||||||||||||||||||||||| |||||||||     
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttg 42240  T
Q  115 ttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||| |||| || ||||||||||| ||| |||||||||||| || ||||||||||||||    
T  42239 ttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 118; Significance: 5e-60; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 10797 - 10640
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  109 gttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgagga 166  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 59 - 184
Target Start/End: Original strand, 11042 - 11167
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||||||||||    
T  11042 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaa 11141  T
Q  159 cacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||||||||    
T  11142 cacgaggaccaaaagtgtaattaagc 11167  T

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Target: scaffold0176 (Bit Score: 111; Significance: 7e-56; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 19001 - 18836
Alignment:
Q  18 ggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattc 117  Q
    |||| ||||||||| || |||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||     
T  19001 ggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgtta 18903  T
Q  118 tgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  18902 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagc 18836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 19069 - 19165
Alignment:
Q  88 aaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 19165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 28662 - 28784
Alignment:
Q  59 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 158  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  159 cacgaggaccaaaagtgtaatta 181  Q
    ||||| |||||||||||||||||    
T  28762 cacgatgaccaaaagtgtaatta 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 709 - 567
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagttt 142  Q
    ||||||||| ||| || ||||||| |||  |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||    
T  709 tgcgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcatttt 610  T
Q  143 cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagca 185  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  609 cgtgagtaggccaaaacacgaggatcaaaagtgtaattaagca 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 16672 - 16568
Alignment:
Q  9 agcatagggggtaggtctaaaacggtcatttctctgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  109 gtttt 113  Q
    |||||    
T  16572 gtttt 16568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 16880 - 17024
Alignment:
Q  25 ctaaaacggtcatttctctgcgttttttgagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgtttt 123  Q
    ||||||| || |||||||||||||| | |||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  124 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacc 168  Q
    |||| |||  || |||||||||||||| | |||||||||||||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 589 - 454
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||  || | || |||||||||||  |||||||| ||||    
T  589 gcgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaatta 181  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  490 gtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 61862 - 62000
Alignment:
Q  44 gcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttc 143  Q
    |||||||| ||| | ||||||||||||||||||||||||  ||||||||||||| ||||| ||   |||| |||| ||||||||||| | ||||| ||||    
T  61862 gcgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttc 61961  T
Q  144 gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  61962 gtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 61098 - 61029
Alignment:
Q  115 ttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| |||||||| |||| || || ||||||||||||||||||||||||||| |||||||||| ||||||    
T  61098 ttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagc 61029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 182
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  82 tgcaacaaaaatgataattgaaggaccgttttattctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 181  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||| | |||||||||||| ||||| |||||||| || |||||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  182 a 182  Q
    |    
T  8551 a 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 7691 - 7778
Alignment:
Q  43 tgcgttttttgagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctgttttaaaaggg 130  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||||||||||||    
T  7691 tgcgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaaggg 7778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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