View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16702_low_51 (Length: 311)
Name: NF16702_low_51
Description: NF16702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16702_low_51 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 24 - 296
Target Start/End: Original strand, 45394990 - 45395262
Alignment:
| Q |
24 |
cacatatggttacataataggttgtttaaatcattgagttgtactaactctattggtattggattaggaccaccaatccaccatcactcacatatataga |
123 |
Q |
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| T |
45394990 |
cacatatggttacataacaggttgtttaaatcattgagttgtactaactctattggtattggattaggaccaccaatccaccatcactcacgtatataga |
45395089 |
T |
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| Q |
124 |
tagatgtgatgcagctaattctattatcatcatcctggaaatcacattacgtggacgtggcatattataagaggcacgtgcttccaacacatgattagtg |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45395090 |
tagatgtgatgcagctaattctattatcatcatcctggaaatcacattacgtggacgtggcatattataagaggcacgtgcttccaacacatgattagtg |
45395189 |
T |
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| Q |
224 |
ctctaaaggttacgttatcatactaatactatctatctattcattgaattggatccatatactatgtagattc |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45395190 |
ctctaaaggttacgttatcatactaatactatctatctattcattgaattggatccatatactatgtagattc |
45395262 |
T |
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