View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16702_low_52 (Length: 308)

Name: NF16702_low_52
Description: NF16702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16702_low_52
NF16702_low_52
[»] chr2 (13 HSPs)
chr2 (150-301)||(38694461-38694624)
chr2 (28-122)||(21750048-21750142)
chr2 (31-122)||(21754353-21754448)
chr2 (31-122)||(21768508-21768603)
chr2 (73-122)||(21754533-21754582)
chr2 (73-122)||(21768678-21768727)
chr2 (74-122)||(21321498-21321546)
chr2 (31-122)||(21768593-21768688)
chr2 (74-122)||(21754438-21754486)
chr2 (76-122)||(21749954-21750000)
chr2 (73-122)||(22673139-22673188)
chr2 (76-122)||(15813514-15813560)
chr2 (73-114)||(19656270-19656311)
[»] chr7 (33 HSPs)
chr7 (28-122)||(16264670-16264764)
chr7 (28-122)||(16272336-16272430)
chr7 (28-122)||(26124733-26124827)
chr7 (28-122)||(3423410-3423504)
chr7 (28-122)||(792779-792873)
chr7 (28-122)||(808562-808656)
chr7 (73-122)||(4889933-4889982)
chr7 (73-122)||(4890028-4890077)
chr7 (73-122)||(12594731-12594780)
chr7 (73-122)||(12594827-12594876)
chr7 (73-122)||(16281239-16281288)
chr7 (73-122)||(16295441-16295490)
chr7 (73-130)||(17452898-17452955)
chr7 (73-122)||(17453002-17453051)
chr7 (73-122)||(17464220-17464269)
chr7 (73-122)||(17464316-17464365)
chr7 (73-122)||(17588849-17588898)
chr7 (73-122)||(17588945-17588994)
chr7 (76-122)||(792685-792731)
chr7 (76-122)||(808468-808514)
chr7 (76-122)||(3423316-3423362)
chr7 (76-122)||(16272242-16272288)
chr7 (73-122)||(3423220-3423269)
chr7 (73-122)||(7342693-7342742)
chr7 (77-122)||(16281143-16281188)
chr7 (77-122)||(16295345-16295390)
chr7 (73-122)||(23445099-23445148)
chr7 (73-122)||(26124872-26124921)
chr7 (76-122)||(16264576-16264622)
chr7 (73-122)||(12606832-12606881)
chr7 (73-122)||(23445003-23445052)
chr7 (82-122)||(17452872-17452912)
chr7 (73-122)||(3423124-3423173)
[»] chr4 (22 HSPs)
chr4 (28-122)||(3357610-3357704)
chr4 (28-122)||(3367276-3367370)
chr4 (33-122)||(55790137-55790226)
chr4 (152-263)||(38873639-38873750)
chr4 (73-122)||(737075-737124)
chr4 (73-122)||(36696076-36696125)
chr4 (73-122)||(40816267-40816316)
chr4 (73-122)||(40816363-40816412)
chr4 (73-121)||(40816556-40816604)
chr4 (76-122)||(3357752-3357798)
chr4 (76-122)||(3367418-3367464)
chr4 (76-122)||(22140822-22140868)
chr4 (76-122)||(22152736-22152782)
chr4 (73-122)||(3396928-3396977)
chr4 (73-122)||(25653184-25653233)
chr4 (73-119)||(49891216-49891262)
chr4 (73-122)||(3397024-3397073)
chr4 (77-122)||(40816459-40816504)
chr4 (31-74)||(25653151-25653194)
chr4 (31-74)||(36695882-36695925)
chr4 (73-122)||(3357845-3357894)
chr4 (73-122)||(3367511-3367560)
[»] chr3 (31 HSPs)
chr3 (28-122)||(16470259-16470353)
chr3 (28-122)||(30021817-30021911)
chr3 (29-122)||(3676033-3676126)
chr3 (29-122)||(3685168-3685261)
chr3 (28-122)||(20434940-20435034)
chr3 (28-122)||(20448866-20448960)
chr3 (28-122)||(41432106-41432200)
chr3 (28-122)||(27873459-27873558)
chr3 (73-122)||(12702272-12702321)
chr3 (73-122)||(13554728-13554777)
chr3 (73-122)||(14738879-14738928)
chr3 (76-122)||(3676174-3676220)
chr3 (76-122)||(3685309-3685355)
chr3 (76-122)||(6957588-6957634)
chr3 (76-122)||(6957683-6957729)
chr3 (76-122)||(6971868-6971914)
chr3 (76-122)||(6971963-6972009)
chr3 (76-122)||(16470165-16470211)
chr3 (76-122)||(20435082-20435128)
chr3 (76-122)||(20449008-20449054)
chr3 (76-122)||(30021959-30022005)
chr3 (76-122)||(41432248-41432294)
chr3 (77-122)||(13554828-13554873)
chr3 (73-122)||(14738974-14739023)
chr3 (76-122)||(47729674-47729720)
chr3 (76-111)||(12998984-12999019)
chr3 (28-74)||(3675982-3676028)
chr3 (28-74)||(3685117-3685163)
chr3 (28-74)||(13848468-13848514)
chr3 (73-122)||(13848405-13848454)
chr3 (31-100)||(14738728-14738793)
[»] scaffold0016 (3 HSPs)
scaffold0016 (31-117)||(57385-57471)
scaffold0016 (73-122)||(57189-57238)
scaffold0016 (73-122)||(57285-57334)
[»] chr8 (19 HSPs)
chr8 (31-122)||(20027099-20027190)
chr8 (31-109)||(15831432-15831509)
chr8 (77-122)||(6664378-6664423)
chr8 (73-122)||(14336754-14336803)
chr8 (73-122)||(20027002-20027051)
chr8 (73-122)||(22106453-22106502)
chr8 (73-122)||(23601838-23601887)
chr8 (77-122)||(6672048-6672093)
chr8 (77-122)||(14336658-14336703)
chr8 (73-122)||(22106583-22106632)
chr8 (77-122)||(23601742-23601787)
chr8 (73-121)||(15831251-15831299)
chr8 (74-122)||(15831394-15831442)
chr8 (73-122)||(31967828-31967877)
chr8 (82-122)||(15831294-15831334)
chr8 (208-263)||(9820095-9820150)
chr8 (73-122)||(12846014-12846062)
chr8 (34-74)||(16738129-16738169)
chr8 (31-71)||(22106423-22106463)
[»] chr5 (21 HSPs)
chr5 (29-122)||(24061336-24061427)
chr5 (73-122)||(345891-345940)
chr5 (73-122)||(360530-360579)
chr5 (73-122)||(36433056-36433105)
chr5 (73-122)||(37577113-37577162)
chr5 (73-122)||(37577209-37577258)
chr5 (73-122)||(37586225-37586274)
chr5 (73-122)||(37586321-37586370)
chr5 (76-122)||(34460630-34460676)
chr5 (76-122)||(34474887-34474933)
chr5 (77-122)||(360434-360479)
chr5 (73-122)||(13459964-13460013)
chr5 (73-122)||(13460060-13460109)
chr5 (73-122)||(21747281-21747330)
chr5 (73-130)||(36433151-36433208)
chr5 (77-119)||(345798-345840)
chr5 (73-122)||(29189639-29189688)
chr5 (82-122)||(36433194-36433234)
chr5 (28-74)||(24061432-24061478)
chr5 (31-100)||(37577344-37577409)
chr5 (31-100)||(37586456-37586521)
[»] chr6 (20 HSPs)
chr6 (31-122)||(27643122-27643217)
chr6 (73-122)||(18868710-18868759)
chr6 (73-122)||(18868804-18868853)
chr6 (73-122)||(22402194-22402243)
chr6 (73-122)||(27642893-27642942)
chr6 (73-122)||(34270085-34270134)
chr6 (76-122)||(30115818-30115864)
chr6 (76-130)||(35024914-35024968)
chr6 (73-122)||(12392220-12392269)
chr6 (73-122)||(18868613-18868662)
chr6 (73-122)||(18868900-18868949)
chr6 (73-122)||(27642988-27643037)
chr6 (73-122)||(27643083-27643132)
chr6 (73-122)||(28268421-28268470)
chr6 (73-122)||(28347171-28347220)
chr6 (73-122)||(33253031-33253080)
chr6 (73-122)||(22402290-22402339)
chr6 (81-122)||(26845321-26845362)
chr6 (73-122)||(33252935-33252984)
chr6 (28-74)||(22402134-22402180)
[»] scaffold0206 (1 HSPs)
scaffold0206 (31-88)||(7901-7958)
[»] scaffold0125 (5 HSPs)
scaffold0125 (73-122)||(9629-9678)
scaffold0125 (73-122)||(16551-16600)
scaffold0125 (73-122)||(15536-15585)
scaffold0125 (73-114)||(16456-16497)
scaffold0125 (73-114)||(9534-9575)
[»] scaffold0031 (3 HSPs)
scaffold0031 (73-122)||(1103-1152)
scaffold0031 (31-74)||(2578-2621)
scaffold0031 (76-122)||(2611-2657)
[»] scaffold0014 (4 HSPs)
scaffold0014 (73-122)||(177942-177991)
scaffold0014 (73-122)||(187406-187455)
scaffold0014 (28-74)||(178005-178051)
scaffold0014 (28-74)||(187469-187515)
[»] scaffold0005 (2 HSPs)
scaffold0005 (76-122)||(305181-305227)
scaffold0005 (76-122)||(297899-297945)
[»] chr1 (7 HSPs)
chr1 (84-122)||(2685940-2685978)
chr1 (31-122)||(20312752-20312847)
chr1 (73-122)||(2686023-2686072)
chr1 (73-122)||(49933706-49933755)
chr1 (31-122)||(20312837-20312932)
chr1 (73-122)||(2686119-2686168)
chr1 (73-122)||(20312922-20312971)
[»] scaffold0560 (2 HSPs)
scaffold0560 (73-122)||(10108-10157)
scaffold0560 (33-74)||(10053-10094)
[»] scaffold0278 (2 HSPs)
scaffold0278 (75-115)||(14653-14693)
scaffold0278 (75-115)||(17987-18027)
[»] scaffold0023 (1 HSPs)
scaffold0023 (73-122)||(146004-146053)


Alignment Details
Target: chr2 (Bit Score: 119; Significance: 8e-61; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 150 - 301
Target Start/End: Original strand, 38694461 - 38694624
Alignment:
Q  150 tatgtacaaggatgatcggttgttgaattttcctaaaaatgcattaattccaaagtaataaaatggagtttttaaatattttcaataaaatagtaatttt 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38694461 tatgtacaaggatgatcggttgttgaattttcctaaaaatgcattaattccaaagtaataaaatggagtttttaaatattttcaataaaatagtaatttt 38694560  T
Q  250 aaatgccactatct------------attatccatcaagaatgtaacatgatgtacctttgctt 301  Q
    ||||||||||||||            ||||||||||||||||||||||||||||||||| ||||    
T  38694561 aaatgccactatctttctatagttgaattatccatcaagaatgtaacatgatgtaccttagctt 38694624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 21750142 - 21750048
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21750142 ctgttaatccagagtgctctggtcctcagttaactactaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 21750048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 21754448 - 21754353
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattataatt----attctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| ||||||||||||| ||||| || ||||||||||||    ||||||||||| ||||||||||||  ||||||| |||||||||||    
T  21754448 ttaatccagagtgctctggtcctcaattaactgtcaatattataatttgttattctccagaataatctggtccttgttaattaatttaatccagag 21754353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 21768603 - 21768508
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattata----attattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| ||||||||||||| ||||| || |||||||||     ||||||||||||| ||||||||||||  ||||||| |||||||||||    
T  21768603 ttaatccagagtgctctggtcctcaattaactgtcaatattatattttgttattctccagaataatctggtccttgttaattaatttaatccagag 21768508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 21754582 - 21754533
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  21754582 taattattctccagaacaatctggtccttgttaattaaattaatccagag 21754533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 21768727 - 21768678
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  21768727 taattattctccagaacaatctggtccttgttaattaaattaatccagag 21768678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 21321546 - 21321498
Alignment:
Q  74 aattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  21321546 aattattctccagaacaatctggtccttcttaattaaattaatccagag 21321498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 21768688 - 21768593
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattata----attattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| ||||||||||||| ||||| || |||||||||     ||||||||||||  |||||||||| |  |||||||||||||||||||    
T  21768688 ttaatccagagtgctctggtcctcaattaactgtcaatattatattttgttattctccagagtaatctggtccctgttaattaaattaatccagag 21768593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 21754486 - 21754438
Alignment:
Q  74 aattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||    
T  21754486 aattattctccagaacaatctggtccctgttaattaaattaatccagag 21754438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 21750000 - 21749954
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||    
T  21750000 ttattctccagaataatctggtccttgttaattaaattaatccagag 21749954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 22673188 - 22673139
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  22673188 taattattctccagaacaatatggtccttgttaattaaattgatccagag 22673139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 15813560 - 15813514
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||| |||||| ||||||||| ||||| |||||||||||||    
T  15813560 ttattctccataacaatttggtccttattaattcaattaatccagag 15813514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 19656311 - 19656270
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaatta 114  Q
    |||||||||||||||| ||||||||||||  |||||||||||    
T  19656311 taattattctccagaataatctggtccttgttaattaaatta 19656270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 16264764 - 16264670
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16264764 ctgttaatccagagtgctctggtcctcagttaactgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 16264670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 16272430 - 16272336
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16272430 ctgttaatccagagtgctctggtcctcagttaactgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 16272336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 26124733 - 26124827
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26124733 ctgttaatccagagtgctctggtcctcagttaactgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 26124827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 3423504 - 3423410
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423504 ctgttaatccagagtgctctggtccccagttaactgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 3423410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 792873 - 792779
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  792873 ctgttaatccagagtgctctggtcctcagttaactgttaatattataattattctccagaacaatctggtcctcaataattgaattaatccagag 792779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 808656 - 808562
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  808656 ctgttaatccagagtgctctggtcctcagttaactgttaatattataattattcttcagaacaatctggtcctcaataattgaattaatccagag 808562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 4889982 - 4889933
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  4889982 taattattctccagaacaatctggtccttgttaattaaattaatccagag 4889933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 4890077 - 4890028
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  4890077 taattattctccagaacaatctggtccttgttaattaaattaatccagag 4890028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 12594731 - 12594780
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  12594731 taattattctccagaacaatctggtccttgttaattaaattaatccagag 12594780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 12594827 - 12594876
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  12594827 taattattctccagaacaatctggtccttgttaattaaattaatccagag 12594876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 16281288 - 16281239
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  16281288 taattattctccagaacaatctggtccttgttaattaaattaatccagag 16281239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 16295490 - 16295441
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  16295490 taattattctccagaacaatctggtccttgttaattaaattaatccagag 16295441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 17452955 - 17452898
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagagcactctgg 130  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| || |||||    
T  17452955 taattattctccagaacaatctggtccttgttaattaaattaatccagaacaatctgg 17452898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 17453051 - 17453002
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  17453051 taattattctccagaacaatctggtccttgttaattaaattaatccagag 17453002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 17464220 - 17464269
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  17464220 taattattctccagaacaatctggtccttgttaattaaattaatccagag 17464269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 17464316 - 17464365
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  17464316 taattattctccagaacaatctggtccttgttaattaaattaatccagag 17464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 17588898 - 17588849
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  17588898 taattattctccagaacaatctggtccttgttaattaaattaatccagag 17588849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 17588994 - 17588945
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  17588994 taattattctccagaacaatctggtccttgttaattaaattaatccagag 17588945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 792731 - 792685
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  792731 ttattctccagaacaatctggtccttgttaattaaattaatccagag 792685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 808514 - 808468
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  808514 ttattctccagaacaatctggtccttgttaattaaattaatccagag 808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 3423362 - 3423316
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  3423362 ttattctccagaacaatctggtccttgttaattaaattaatccagag 3423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 16272288 - 16272242
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  16272288 ttattctccagaacaatctggtccttgttaattaaattaatccagag 16272242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 3423269 - 3423220
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  3423269 taattactctccagaacaatctggtccttgttaattaaattaatccagag 3423220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 7342742 - 7342693
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  7342742 taattattctccagaacaatctggtctttgttaattaaattaatccagag 7342693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 16281188 - 16281143
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  16281188 tattctccagaacaatctggtccttgttaattaaattaatccagag 16281143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 16295390 - 16295345
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  16295390 tattctccagaacaatctggtccttgttaattaaattaatccagag 16295345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 23445099 - 23445148
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||    
T  23445099 taattattctccagaacaatctggtccttgtgaattaaattaatccagag 23445148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 26124872 - 26124921
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  26124872 taattattctccagaacaatctggtccttgttaattaaattaattcagag 26124921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 16264622 - 16264576
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||    
T  16264622 ttattctccagaacaatctggtccttgttaattaaattaatctagag 16264576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 12606881 - 12606832
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||| ||||||||  |||||||||| ||||||||    
T  12606881 taattattctccagaacaatatggtccttgttaattaaattgatccagag 12606832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 23445003 - 23445052
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||| ||||||||||||  ||||||||||||| |||||    
T  23445003 taattattctccagaataatctggtccttgttaattaaattaattcagag 23445052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 17452912 - 17452872
Alignment:
Q  82 tccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  17452912 tccagaacaatctggtccttgttaattaaattaatccagag 17452872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 3423173 - 3423124
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||| ||||||||||||||||||| ||   ||||||||||||||||||    
T  3423173 taattactctccagaacaatctggtctttgtcaattaaattaatccagag 3423124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 3357610 - 3357704
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3357610 ctgttaatccagagtgctctggtccccagttaactgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 3357704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 3367276 - 3367370
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3367276 ctgttaatccagagtgctctggtccccagttaactgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 3367370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 55790137 - 55790226
Alignment:
Q  33 aatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  55790137 aatccagagtgctctggtcctaaattaactgttaatattataattattctccagaacaatctggtccttgttaattaaattaatccagag 55790226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 263
Target Start/End: Complemental strand, 38873750 - 38873639
Alignment:
Q  152 tgtacaaggatgatcggttgttgaattttcctaaaaatgcattaattccaaagtaataaaatggagtttttaaatattttcaataaaatagtaattttaa 251  Q
    |||||| |||||||| |||| | |||| || ||||||||||| |||||||||||||| |||||||||| || |||||||||   ||||||||| ||||||    
T  38873750 tgtacatggatgatcagttgctcaattgtcgtaaaaatgcataaattccaaagtaatcaaatggagttgtttaatattttcttgaaaatagtagttttaa 38873651  T
Q  252 atgccactatct 263  Q
    ||||||||||||    
T  38873650 atgccactatct 38873639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 737124 - 737075
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  737124 taattattctccagaacaatctggtccttgttaattaaattaatccagag 737075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 36696125 - 36696076
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  36696125 taattattctccagaacaatctggtccttgttaattaaattaatccagag 36696076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 40816316 - 40816267
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  40816316 taattattctccagaacaatctggtccttgttaattaaattaatccagag 40816267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 40816412 - 40816363
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  40816412 taattattctccagaacaatctggtccttgttaattaaattaatccagag 40816363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 40816604 - 40816556
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccaga 121  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  40816604 taattattctccagaacaatctggtccttgttaattaaattaatccaga 40816556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 3357752 - 3357798
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  3357752 ttattctccagaacaatctggtccttgttaattaaattaatccagag 3357798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 3367418 - 3367464
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  3367418 ttattctccagaacaatctggtccttgttaattaaattaatccagag 3367464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 22140868 - 22140822
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  22140868 ttattctccagaacaatctggtccttgttaattaaattaatccagag 22140822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 22152782 - 22152736
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  22152782 ttattctccagaacaatctggtccttgttaattaaattaatccagag 22152736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 3396977 - 3396928
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  3396977 taattattctccagaacaatctggtccttgttaattaaattaatacagag 3396928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 25653233 - 25653184
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  25653233 taattattctccaggacaatctggtccttgttaattaaattaatccagag 25653184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 49891216 - 49891262
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatcca 119  Q
    |||||||||||||||||||||||||||||  ||| ||||||||||||    
T  49891216 taattattctccagaacaatctggtccttgttaactaaattaatcca 49891262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 3397073 - 3397024
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||| ||||| ||||||||||||  |||||||||||||||||||    
T  3397073 taattattcttcagaataatctggtccttgttaattaaattaatccagag 3397024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 40816504 - 40816459
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||    
T  40816504 tattctccagaacaatctcgtccttgttaattaaattaatccagag 40816459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 25653194 - 25653151
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||    
T  25653194 ttaatccagagtgctctggtcctcaattaactgttaatattata 25653151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 36695925 - 36695882
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||    
T  36695925 ttaatccagagtgctctggtcctcagttaattgttaatattata 36695882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 3357845 - 3357894
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||| ||||||||||||||||||| ||   ||||||||||||||||||    
T  3357845 taattactctccagaacaatctggtctttgtcaattaaattaatccagag 3357894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 3367511 - 3367560
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||| ||||||||||||||||||| ||   ||||||||||||||||||    
T  3367511 taattactctccagaacaatctggtctttgtcaattaaattaatccagag 3367560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 16470353 - 16470259
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16470353 ctgttaatccagagtgttctggtcctcagttaactgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 16470259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 30021817 - 30021911
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30021817 ctgttaatccagagtgctctggtccccagttaactgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 30021911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 3676033 - 3676126
Alignment:
Q  29 tgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3676033 tgttaatccagagtgctctggtccccagttagctgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 3676126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 3685168 - 3685261
Alignment:
Q  29 tgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3685168 tgttaatccagagtgctctggtccccagttagctgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 3685261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 20434940 - 20435034
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| || |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434940 ctgttaatccaaagtgctctggtccccagttagctgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 20435034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 20448866 - 20448960
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| || |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20448866 ctgttaatccaaagtgctctggtccccagttagctgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 20448960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 41432106 - 41432200
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| || |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41432106 ctgttaatccaaagtgctctggtccccagttagctgttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 41432200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 27873459 - 27873558
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattata-----attattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||| ||||||||||| | ||||| ||||||||||||      ||||||| |||| |||||||||||||  |||||||||||||||||||    
T  27873459 ctgttaatccagagtgctctggtccttaattaactgttaatattatattcttgttattctgcagagcaatctggtccttgttaattaaattaatccagag 27873558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 12702272 - 12702321
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  12702272 taattattctccagaacaatctggtccttgttaattaaattaatccagag 12702321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 13554728 - 13554777
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  13554728 taattattctccagaacaatctggtccttgttaattaaattaatccagag 13554777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 14738928 - 14738879
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  14738928 taattattctccagaacaatctggtccttgttaattaaattaatccagag 14738879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 3676174 - 3676220
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  3676174 ttattctccagaacaatctggtccttgttaattaaattaatccagag 3676220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 3685309 - 3685355
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  3685309 ttattctccagaacaatctggtccttgttaattaaattaatccagag 3685355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 6957634 - 6957588
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  6957634 ttattctccagaacaatctggtccttgttaattaaattaatccagag 6957588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 6957729 - 6957683
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  6957729 ttattctccagaacaatctggtccttgttaattaaattaatccagag 6957683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 6971914 - 6971868
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  6971914 ttattctccagaacaatctggtccttgttaattaaattaatccagag 6971868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 6972009 - 6971963
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  6972009 ttattctccagaacaatctggtccttgttaattaaattaatccagag 6971963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 16470211 - 16470165
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  16470211 ttattctccagaacaatctggtccttgttaattaaattaatccagag 16470165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 20435082 - 20435128
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  20435082 ttattctccagaacaatctggtccttgttaattaaattaatccagag 20435128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 20449008 - 20449054
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  20449008 ttattctccagaacaatctggtccttgttaattaaattaatccagag 20449054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 30021959 - 30022005
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  30021959 ttattctccagaacaatctggtccttgttaattaaattaatccagag 30022005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 41432248 - 41432294
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  41432248 ttattctccagaacaatctggtccttgttaattaaattaatccagag 41432294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 13554828 - 13554873
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  13554828 tattctccagaacaatctggtccttgttaattaaattaatccagag 13554873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 14739023 - 14738974
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  14739023 taattattctccggaacaatctggtccttgttaattaaattaatccagag 14738974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 47729674 - 47729720
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  47729674 ttattctgcagaacaatctggtccttattaattaaataaatccagag 47729720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 12999019 - 12998984
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaa 111  Q
    ||||||||||||||||||||||||||| ||||||||    
T  12999019 ttattctccagaacaatctggtccttattaattaaa 12998984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 3675982 - 3676028
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    |||||||||||||| ||||||||||| | ||||| ||||||||||||    
T  3675982 ctgttaatccagagtgctctggtcctaaattaactgttaatattata 3676028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 3685117 - 3685163
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    |||||||||||||| ||||||||||| | ||||| ||||||||||||    
T  3685117 ctgttaatccagagtgctctggtcctaaattaactgttaatattata 3685163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 13848514 - 13848468
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    |||||||||||||| ||||||||||| ||||||  ||||||||||||    
T  13848514 ctgttaatccagagtgctctggtcctaagttaattgttaatattata 13848468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 13848454 - 13848405
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||| |||||  |  |||||||||||||||||||    
T  13848454 taattattctccagaacaatatggtctctgttaattaaattaatccagag 13848405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 14738793 - 14738728
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtcct 100  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||    |||||||||||| | |||||||||    
T  14738793 ttaatccagagtgctctggtcctaaattaactgttaatatta----tattctccagaatattctggtcct 14738728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 57471 - 57385
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatc 117  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  57471 ttaatccaaagtgctctggtcctcagttaactgttaatattataattattctccagaacaatctggtccttaataattaaattaatc 57385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 57238 - 57189
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  57238 taattattctccagaacaatctggtccttgttaactaaattaatccagag 57189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 57334 - 57285
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||| ||  || ||||||||||||||||    
T  57334 taattattctccagaacaatctggtcgttgttatttaaattaatccagag 57285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 9e-33; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 20027190 - 20027099
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20027190 ttaatccagagtgctctggtcctcagttttctgttaatattataattattctccagaacaatctggtccttaataattaatttaatccagag 20027099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 15831432 - 15831509
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataatta 109  Q
    ||||||||||| ||||||||||||| ||||| || |||||||| |||||||||||||| |||||||||||| |||||||    
T  15831432 ttaatccagagtgctctggtcctcaattaaccgtcaatattat-attattctccagaataatctggtccttgataatta 15831509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 6664378 - 6664423
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  6664378 tattctccagaacaatctggtccttattaattaaattaatccagag 6664423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 14336803 - 14336754
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  14336803 taattattctccagaacaatctggtccttgttaattaaattaatccagag 14336754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 20027051 - 20027002
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  20027051 taattattctccagaacaatctggtccttgttaattaaattaatccagag 20027002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 22106502 - 22106453
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22106502 taattattctccagaacaatctggtccttgttaattaaattaatccagag 22106453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 23601887 - 23601838
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  23601887 taattattctccagaacaatctggtccttgttaattaaattaatccagag 23601838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 6672048 - 6672093
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  6672048 tattctccagaacaatctggtccttgttaattaaattaatccagag 6672093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 14336703 - 14336658
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  14336703 tattctccagaacaatctggtccttgttaattaaattaatccagag 14336658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 22106632 - 22106583
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  22106632 taattattctccataacaatctggtccttgttaattaaattaatccagag 22106583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 23601787 - 23601742
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  23601787 tattctccagaacaatctggtccttgttaattaaattaatccagag 23601742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 15831251 - 15831299
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccaga 121  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  15831251 taattattctccagaataatctggtccttgttaattaaattaatccaga 15831299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 15831394 - 15831442
Alignment:
Q  74 aattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  15831394 aattattctccagaataatctggtccttgttaattaaattaatccagag 15831442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 31967877 - 31967828
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  31967877 taattattctccagaacaatctagtccttgttaattaaattaattcagag 31967828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 15831294 - 15831334
Alignment:
Q  82 tccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  15831294 tccagaataatctggtccttattaattaaattaatccagag 15831334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 9820150 - 9820095
Alignment:
Q  208 taaaatggagtttttaaatattttcaataaaatagtaattttaaatgccactatct 263  Q
    |||||||||||| || ||||||||    ||||||||||||||||||||||||||||    
T  9820150 taaaatggagttgttgaatattttgttgaaaatagtaattttaaatgccactatct 9820095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 12846014 - 12846062
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  12846014 taattattctccagaacaatctagtccttgttaattaaa-taatccagag 12846062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 16738129 - 16738169
Alignment:
Q  34 atccagagggctctggtcctcagttaacggttaatattata 74  Q
    |||||||| ||||||||||| ||||||| ||||||||||||    
T  16738129 atccagagtgctctggtcctaagttaactgttaatattata 16738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 22106463 - 22106423
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatatt 71  Q
    ||||||||||| ||||||||||| ||||||| |||||||||    
T  22106463 ttaatccagagtgctctggtcctaagttaactgttaatatt 22106423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 24061427 - 24061336
Alignment:
Q  29 tgttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||  ||||||||  |||||||||||||||||||    
T  24061427 tgttaatccagagtgctctggtcctcagttaactgttaatattataattattctccagagcaa--tggtccttgttaattaaattaatccagag 24061336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 345940 - 345891
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  345940 taattattctccagaacaatctggtccttgttaattaaattaatccagag 345891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 360579 - 360530
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  360579 taattattctccagaacaatctggtccttgttaattaaattaatccagag 360530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 36433056 - 36433105
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  36433056 taattattctccagaacaatctggtccttgttaattaaattaatccagag 36433105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 37577113 - 37577162
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  37577113 taattattctccagaacaatctggtccttgttaattaaattaatccagag 37577162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 37577209 - 37577258
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  37577209 taattattctccagaacaatctggtccttgttaattaaattaatccagag 37577258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 37586225 - 37586274
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  37586225 taattattctccagaacaatctggtccttgttaattaaattaatccagag 37586274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 37586321 - 37586370
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  37586321 taattattctccagaacaatctggtccttgttaattaaattaatccagag 37586370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 34460630 - 34460676
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  34460630 ttattctccagaacaatctggtccttgttaattaaattaatccagag 34460676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 34474887 - 34474933
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  34474887 ttattctccagaacaatctggtccttgttaattaaattaatccagag 34474933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 360479 - 360434
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  360479 tattctccagaacaatctggtccttgttaattaaattaatccagag 360434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 13459964 - 13460013
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  13459964 taattattctccagaacaatctggtccttgttaattaaattaattcagag 13460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 13460060 - 13460109
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  13460060 taattattctccagaacaatctggttcttgttaattaaattaatccagag 13460109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 21747330 - 21747281
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  21747330 taattattctccagaacaatctggtccttgttaattaaattaatctagag 21747281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 36433151 - 36433208
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagagcactctgg 130  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||| || |||||    
T  36433151 taattattctccagaacaatctggtccttgttaactaaattaatccagaacaatctgg 36433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 345840 - 345798
Alignment:
Q  77 tattctccagaacaatctggtccttaataattaaattaatcca 119  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  345840 tattctccagaacaatctggtccttgttaattaaattaatcca 345798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 29189639 - 29189688
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||| ||||||||||||  |||||| ||||||||||||    
T  29189639 taattattctccagaataatctggtccttgttaattacattaatccagag 29189688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 36433194 - 36433234
Alignment:
Q  82 tccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  36433194 tccagaacaatctggtccttgttaattaaattaatccagag 36433234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 24061478 - 24061432
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    |||||||||||||| ||||||||||| | ||||| ||||||||||||    
T  24061478 ctgttaatccagagtgctctggtcctaaattaactgttaatattata 24061432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 37577344 - 37577409
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtcct 100  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||    |||||||||||| | |||||||||    
T  37577344 ttaatccagagtgctctggtcctaaattaactgttaatatta----tattctccagaatattctggtcct 37577409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 37586456 - 37586521
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaacaatctggtcct 100  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||    |||||||||||| | |||||||||    
T  37586456 ttaatccagagtgctctggtcctaaattaactgttaatatta----tattctccagaatattctggtcct 37586521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 27643122 - 27643217
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattata----attattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| ||||||||||||| ||||| || |||||||||     ||||||||||||| ||||||||||||  ||||||| |||||||||||    
T  27643122 ttaatccagagtgctctggtcctcaattaactgtcaatattatattttgttattctccagaataatctggtccttgttaattaatttaatccagag 27643217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 18868710 - 18868759
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  18868710 taattattctccagaacaatctggtccttgttaattaaattaatccagag 18868759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 18868804 - 18868853
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  18868804 taattattctccagaacaatctggtccttgttaattaaattaatccagag 18868853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 22402194 - 22402243
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22402194 taattattctccagaacaatctggtccttgttaattaaattaatccagag 22402243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 27642893 - 27642942
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  27642893 taattattctccagaacaatctggtccttgttaattaaattaatccagag 27642942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 34270085 - 34270134
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  34270085 taattattctccagaacaatctggtccttgttaattaaattaatccagag 34270134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 30115818 - 30115864
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  30115818 ttattctccagaacaatctggtccttgttaattaaattaatccagag 30115864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 35024914 - 35024968
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagagcactctgg 130  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||    
T  35024914 ttattctccagaacaatatggtccttattaattaaataaatccagagtactctgg 35024968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 12392220 - 12392269
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  12392220 taattattctccagaacaatctggtccctgttaattaaattaatccagag 12392269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 18868613 - 18868662
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  18868613 taattatcctccagaacaatctggtccttgttaattaaattaatccagag 18868662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 18868900 - 18868949
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  18868900 taattatcctccagaacaatctggtccttgttaattaaattaatccagag 18868949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 27642988 - 27643037
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  27642988 taattattctccagaacaatctggtccctgttaattaaattaatccagag 27643037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 27643083 - 27643132
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  27643083 taattattctccagaacaatctggtccctgttaattaaattaatccagag 27643132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 28268470 - 28268421
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  28268470 taattattctccagaacgatctggtccttgttaattaaattaatccagag 28268421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 28347220 - 28347171
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  28347220 taattattctccagaacgatctggtccttgttaattaaattaatccagag 28347171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 33253031 - 33253080
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  33253031 taattattctccagaataatctggtccttgttaattaaattaatccagag 33253080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 22402290 - 22402339
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||| |||||||||  ||||||||||||| |||||    
T  22402290 taattattctccagaacaacctggtccttgttaattaaattaattcagag 22402339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 26845362 - 26845321
Alignment:
Q  81 ctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  26845362 ctccagaacaatctggtccttgttaattaaattaatccagag 26845321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 33252935 - 33252984
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||| ||  ||||||||||||| |||||    
T  33252935 taattattctccagaacaatctggtctttgttaattaaattaattcagag 33252984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 22402134 - 22402180
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    |||||||||||||| ||||||||||| | ||||| ||||||||||||    
T  22402134 ctgttaatccagagtgctctggtcctaaattaactgttaatattata 22402180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 7958 - 7901
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattataattattctccagaa 88  Q
    ||||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||    
T  7958 ttaatccagagtgctctggtcctcagttttctgttaatattataattattctccagaa 7901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 5)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 9629 - 9678
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9629 taattattctccagaacaatctggtccttgttaattaaattaatccagag 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 16551 - 16600
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  16551 taattattctccagaacaatctggtccttgttaattaaattaatccagag 16600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 15536 - 15585
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  15536 taattattctccagaataatctggtccttgttaattaaattaatccagag 15585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 16456 - 16497
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaatta 114  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  16456 taattattctccagaacaatctggtccttgttaattaaatta 16497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 9534 - 9575
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaatta 114  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  9534 taattattctccagaacaatctggtccgtgttaattaaatta 9575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 1152 - 1103
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  1152 taattattctccagaacaatctggtccttgttaattaaattaatccagag 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 2621 - 2578
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||    
T  2621 ttaatccagagtgctctggtcctcaattaactgttaatattata 2578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 2657 - 2611
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||| ||||||||  | |||||||||||||||||    
T  2657 ttattctccagaacaatatggtccttgttcattaaattaatccagag 2611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 177991 - 177942
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  177991 taattattctccagaacaatctggtccttgttaattaaattaatccagag 177942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 187455 - 187406
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  187455 taattattctccagaacaatctggtccttgttaattaaattaatccagag 187406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 178051 - 178005
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    |||||||||||||| |||||||||||  |||||| ||||||||||||    
T  178051 ctgttaatccagagtgctctggtcctatgttaactgttaatattata 178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 187515 - 187469
Alignment:
Q  28 ctgttaatccagagggctctggtcctcagttaacggttaatattata 74  Q
    |||||||||||||| |||||||||||  |||||| ||||||||||||    
T  187515 ctgttaatccagagtgctctggtcctatgttaactgttaatattata 187469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 305181 - 305227
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  305181 ttattctccagaacaatctggtccttattgattaaattaatccagag 305227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 297899 - 297945
Alignment:
Q  76 ttattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||| ||| ||| ||||||||| |||||||||||||||||||    
T  297899 ttattctccggaataatatggtccttattaattaaattaatccagag 297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 2685940 - 2685978
Alignment:
Q  84 cagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2685940 cagaacaatctggtccttaataattaaattaatccagag 2685978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 20312847 - 20312752
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattata----attattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| ||||||||||||| ||||| || |||||||||     ||||||||||||| |||||||||  |  |||||||||||||||||||    
T  20312847 ttaatccagagtgctctggtcctcaattaactgtcaatattatattttgttattctccagaataatctggtcagtgttaattaaattaatccagag 20312752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 2686023 - 2686072
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  2686023 taattattctccagaacaatctgatccttgttaattaaattaatccagag 2686072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 49933706 - 49933755
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  49933706 taattattctccagaacgatctggtccttgttaattaaattaatccagag 49933755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 20312932 - 20312837
Alignment:
Q  31 ttaatccagagggctctggtcctcagttaacggttaatattata----attattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||| ||||||||||    ||||| ||||||||||||     |||||||||||||| ||||||||| |  |||||||||||||||||||    
T  20312932 ttaatccagagtgctctggtcccatattaactgttaatattatattttgttattctccagaacgatctggtccctgttaattaaattaatccagag 20312837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 2686119 - 2686168
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||| ||||| ||||||||||||||||   ||||||||||||||||||    
T  2686119 taattactctccggaacaatctggtccttgtcaattaaattaatccagag 2686168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 20312971 - 20312922
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    |||||||| |||||||  |||||||||||  |||||||||||||||||||    
T  20312971 taattattgtccagaatgatctggtccttgttaattaaattaatccagag 20312922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 10108 - 10157
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||||||    
T  10108 taattattctccagagcagtctggtccttgttaattaaattaatccagag 10157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 10053 - 10094
Alignment:
Q  33 aatccagagggctctggtcctcagttaacggttaatattata 74  Q
    ||||||||| ||||||||||||||||||  ||||||||||||    
T  10053 aatccagagtgctctggtcctcagttaattgttaatattata 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 14693 - 14653
Alignment:
Q  75 attattctccagaacaatctggtccttaataattaaattaa 115  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  14693 attattctccagaacaatctggtccttcttaattaaattaa 14653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 18027 - 17987
Alignment:
Q  75 attattctccagaacaatctggtccttaataattaaattaa 115  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  18027 attattctccagaacaatctggtccttcttaattaaattaa 17987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 146053 - 146004
Alignment:
Q  73 taattattctccagaacaatctggtccttaataattaaattaatccagag 122  Q
    ||||||||||||| |||||| ||||||||   ||||||||||||||||||    
T  146053 taattattctccaaaacaatttggtccttgtaaattaaattaatccagag 146004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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