View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16702_low_57 (Length: 300)
Name: NF16702_low_57
Description: NF16702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16702_low_57 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 138 - 278
Target Start/End: Complemental strand, 11612520 - 11612380
Alignment:
| Q |
138 |
ggtaagaactttggtgaattaagtgaaaagcagtaaaagatatttcacacctcaaagcatagtaaagcataagaaataaagagatagtgctatgaatcaa |
237 |
Q |
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| T |
11612520 |
ggtaagaactttggtgaattaagtgaaaagcagtaaaagatatttcacacctcaaagcatagtaaagcataagaaataaagagatagtgctatgaatcaa |
11612421 |
T |
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| Q |
238 |
tagggacacatgaaaaaagagaagagagtactaacatatga |
278 |
Q |
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| T |
11612420 |
tagtgacacatgaaaaaagagaagagagtactaacatatga |
11612380 |
T |
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