View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16702_low_58 (Length: 290)
Name: NF16702_low_58
Description: NF16702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16702_low_58 |
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Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 34570798 - 34570527
Alignment:
| Q |
1 |
attatcaaggattacttggagaagaaggaaaaggaagtaggaaaaaaggtaagcacaatcttcatcataccccatgtatatatgattatgtgaatatatt |
100 |
Q |
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| T |
34570798 |
attatcaaggattacttggagaagaaggaaaaggaagtaggaaaaaaggtaagcacaatcttcatcataccccatgtatatatgattatgtgaatatatt |
34570699 |
T |
|
| Q |
101 |
tgaatatgtcatagactcttagtcatagaacaataagaaattaactaattattgtttctgactattgagggttctattgcagttcaatcttccatcacct |
200 |
Q |
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| T |
34570698 |
tgaatatgtcatagactcttagtcatagaacaataagaaattaactaattattgtttctgactattgagggttctattgcagttcaatcttccatcacct |
34570599 |
T |
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| Q |
201 |
caaaggaattctacattccagaaattgtttgggttgcctccagaagaatttctaatcaatgatttcacatgt |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
34570598 |
caaaggaattctacattccagaaattgtttgggttgccaccagaagaatttctaatcaatgatttcacatgt |
34570527 |
T |
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