View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16703_high_53 (Length: 239)
Name: NF16703_high_53
Description: NF16703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16703_high_53 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 31871143 - 31871373
Alignment:
| Q |
9 |
ccaccatactccaatgcagagagaactggctgctgcctcgatttcttgcgggaaaggttgttggcagagagagaggcagcagatgatgagaaaggtaaac |
108 |
Q |
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| T |
31871143 |
ccaccatactccaatgcagagagaactggctgctgcctcgatttcttgcgggaaaggttgttggcagagagagaggcagcagatgatgagaaaggtaaac |
31871242 |
T |
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| Q |
109 |
aaaattttaagctccttaggctattattactttgacgaaatagcgaaagtgtagcatgcacggaagagatcatcattgccacacagatgactgagtctta |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31871243 |
aaaattttaagctccttaggctattattactttgacgaaatagcgaaagtgtggcatgcacggaagagatcatcattgccacacagatgactgagtctta |
31871342 |
T |
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| Q |
209 |
caatgttgcaattgatttctgcaaagaattg |
239 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
31871343 |
caatgttgcaattgatttctgcaaagaattg |
31871373 |
T |
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