View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16703_low_21 (Length: 477)
Name: NF16703_low_21
Description: NF16703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16703_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 429; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 19 - 463
Target Start/End: Original strand, 32991741 - 32992185
Alignment:
| Q |
19 |
ttttaaggataaactcaattggtcatgatgatcttcttgattattcttcacttccacctctcatggatccttcttacacaaatgatgatttcaaaggaat |
118 |
Q |
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| T |
32991741 |
ttttaaggataaactcaattggtcatgatgatcttcttgattattcttcacttccacctctcatggatccttcttacacaaatgatgatttcaaaggaat |
32991840 |
T |
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| Q |
119 |
taccacaaatcaacaaatttcatcaactaaatcacaatcagatggatattatcttccaagcttctccatcaacaataatcaacatcaatttctcatcaag |
218 |
Q |
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| T |
32991841 |
taccacaaatcaacaaatttcatcaactaaatcacaatcagatggatattatcttccaagcttctccatcaacaataatcaacatcaatttctcatcaag |
32991940 |
T |
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| Q |
219 |
ccagaagataattaccatagaatcaactatgatcaacatgagattaatccaaccatgatgaactacacttctatttccaaccaatccaatctcaacaacc |
318 |
Q |
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| T |
32991941 |
ccagaagataattaccatagaatcaactatgatcaacatgagattaatccaaccatgatgaactacacttccatttccaaccaatccaatctcaacaacc |
32992040 |
T |
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| Q |
319 |
caattggaaacactctatcacaacctcaaatccgaatccaaaatcaaaacttgaactactttatgtatcaaaataggatgcaaagttccatgccaacaaa |
418 |
Q |
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|||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32992041 |
caattggaaacactttaccacaacctcaaatccgaatccaaaatccaaacttgaactactttatgtatcaaaataggatgcaaagttccatgccaacaaa |
32992140 |
T |
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| Q |
419 |
tgtttatggctcaggtaagaataatgagtgcaaggtggaacaatt |
463 |
Q |
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| T |
32992141 |
tgtttatggctcaggtaagaataatgagtgcaaggtggaacaatt |
32992185 |
T |
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