View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16703_low_23 (Length: 469)

Name: NF16703_low_23
Description: NF16703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16703_low_23
NF16703_low_23
[»] chr1 (117 HSPs)
chr1 (132-402)||(12448969-12449238)
chr1 (135-404)||(32624004-32624274)
chr1 (170-408)||(39555581-39555819)
chr1 (135-408)||(24190364-24190635)
chr1 (135-404)||(43667302-43667568)
chr1 (170-404)||(2125965-2126200)
chr1 (236-404)||(15959639-15959807)
chr1 (236-408)||(6785450-6785621)
chr1 (183-408)||(32983167-32983390)
chr1 (171-404)||(35691320-35691554)
chr1 (236-408)||(6786832-6787004)
chr1 (171-406)||(42965813-42966045)
chr1 (236-408)||(33369547-33369716)
chr1 (187-404)||(28120754-28120970)
chr1 (236-408)||(40718672-40718844)
chr1 (236-408)||(45226132-45226304)
chr1 (236-408)||(28016741-28016911)
chr1 (236-399)||(39932576-39932739)
chr1 (236-408)||(13136549-13136717)
chr1 (236-407)||(7467958-7468130)
chr1 (238-408)||(24728621-24728792)
chr1 (238-408)||(3076291-3076461)
chr1 (236-408)||(47014488-47014657)
chr1 (236-408)||(3875014-3875188)
chr1 (236-405)||(1820409-1820578)
chr1 (236-404)||(46542978-46543144)
chr1 (236-408)||(33431555-33431725)
chr1 (237-410)||(46818495-46818668)
chr1 (238-408)||(44148831-44148997)
chr1 (236-404)||(47600035-47600206)
chr1 (288-408)||(11241073-11241193)
chr1 (236-391)||(2246026-2246181)
chr1 (263-408)||(32742197-32742342)
chr1 (236-391)||(37735395-37735550)
chr1 (237-399)||(3861699-3861859)
chr1 (254-408)||(7875935-7876091)
chr1 (237-342)||(6787051-6787155)
chr1 (241-342)||(16854139-16854240)
chr1 (288-408)||(52984979-52985099)
chr1 (237-342)||(50369953-50370061)
chr1 (248-408)||(45840061-45840220)
chr1 (248-342)||(5950445-5950539)
chr1 (239-341)||(10558818-10558920)
chr1 (236-342)||(23392227-23392332)
chr1 (248-408)||(7397712-7397872)
chr1 (236-385)||(25391678-25391824)
chr1 (238-385)||(43765290-43765438)
chr1 (248-342)||(5858432-5858526)
chr1 (238-401)||(47302910-47303071)
chr1 (236-408)||(50012585-50012745)
chr1 (288-408)||(30221771-30221891)
chr1 (236-404)||(1034852-1035017)
chr1 (260-404)||(298667-298812)
chr1 (350-408)||(4672939-4672997)
chr1 (248-342)||(16688142-16688236)
chr1 (135-219)||(15959855-15959939)
chr1 (248-408)||(37538815-37538975)
chr1 (135-217)||(6787208-6787290)
chr1 (248-406)||(25185300-25185459)
chr1 (136-217)||(6786700-6786781)
chr1 (248-342)||(8889758-8889845)
chr1 (248-408)||(41063747-41063908)
chr1 (256-322)||(14086966-14087030)
chr1 (264-408)||(30701380-30701524)
chr1 (248-408)||(35366198-35366358)
chr1 (276-342)||(32318621-32318687)
chr1 (249-404)||(52841444-52841599)
chr1 (172-217)||(4672798-4672843)
chr1 (172-217)||(6785355-6785400)
chr1 (172-217)||(7468170-7468215)
chr1 (172-217)||(28016961-28017006)
chr1 (248-341)||(44510281-44510374)
chr1 (250-330)||(47026655-47026736)
chr1 (172-216)||(44149050-44149094)
chr1 (238-294)||(50665259-50665315)
chr1 (308-404)||(50176588-50176684)
chr1 (135-217)||(11240907-11240989)
chr1 (248-342)||(13351686-13351780)
chr1 (248-342)||(15912204-15912298)
chr1 (236-276)||(11241037-11241077)
chr1 (135-203)||(16853997-16854065)
chr1 (172-216)||(38942642-38942686)
chr1 (172-216)||(40935814-40935858)
chr1 (172-216)||(40960675-40960719)
chr1 (172-216)||(49924334-49924378)
chr1 (248-327)||(34102049-34102127)
chr1 (172-217)||(35366401-35366446)
chr1 (172-216)||(4529102-4529146)
chr1 (356-408)||(7190770-7190822)
chr1 (172-216)||(29488663-29488707)
chr1 (173-217)||(37538728-37538772)
chr1 (249-333)||(42724101-42724185)
chr1 (248-292)||(43359696-43359740)
chr1 (248-340)||(16661521-16661614)
chr1 (76-134)||(28563374-28563437)
chr1 (173-216)||(36383844-36383887)
chr1 (182-217)||(45226046-45226081)
chr1 (172-203)||(46542880-46542911)
chr1 (173-203)||(44056513-44056543)
chr1 (172-217)||(298884-298929)
chr1 (172-217)||(1820314-1820359)
chr1 (375-408)||(6304792-6304825)
chr1 (172-217)||(7397625-7397670)
chr1 (172-217)||(33369452-33369497)
chr1 (248-321)||(39151242-39151315)
chr1 (172-217)||(45840246-45840291)
chr1 (135-216)||(46949199-46949280)
chr1 (172-217)||(47026393-47026438)
chr1 (176-216)||(9127962-9128002)
chr1 (172-216)||(26907290-26907334)
chr1 (176-216)||(28017577-28017617)
chr1 (176-216)||(35189119-35189159)
chr1 (176-216)||(35941760-35941800)
chr1 (173-217)||(37735607-37735651)
chr1 (173-217)||(43359609-43359653)
chr1 (176-216)||(44875098-44875138)
chr1 (172-216)||(48566252-48566295)
[»] chr7 (79 HSPs)
chr7 (136-408)||(18102423-18102696)
chr7 (136-408)||(14805764-14806035)
chr7 (136-408)||(15252758-15253029)
chr7 (136-408)||(25737621-25737895)
chr7 (135-408)||(45485846-45486121)
chr7 (135-408)||(46760251-46760525)
chr7 (136-404)||(19912767-19913034)
chr7 (170-408)||(35923180-35923417)
chr7 (236-408)||(25944570-25944742)
chr7 (236-408)||(6191039-6191211)
chr7 (236-391)||(20123691-20123846)
chr7 (238-408)||(47779600-47779770)
chr7 (236-408)||(4910629-4910799)
chr7 (238-408)||(22632085-22632255)
chr7 (238-408)||(14574560-14574730)
chr7 (236-340)||(47557663-47557767)
chr7 (276-404)||(12632342-12632470)
chr7 (236-342)||(9158084-9158189)
chr7 (238-408)||(15995715-15995886)
chr7 (236-402)||(44682872-44683037)
chr7 (236-396)||(11780012-11780171)
chr7 (134-279)||(12633110-12633256)
chr7 (236-340)||(2610630-2610734)
chr7 (136-225)||(16562642-16562731)
chr7 (136-225)||(16602931-16603020)
chr7 (238-408)||(16917468-16917637)
chr7 (248-342)||(39170540-39170634)
chr7 (135-219)||(25944438-25944522)
chr7 (136-227)||(47557922-47558012)
chr7 (239-333)||(27810804-27810898)
chr7 (263-341)||(31549964-31550042)
chr7 (350-404)||(37767017-37767071)
chr7 (249-342)||(24151642-24151734)
chr7 (244-396)||(48413723-48413867)
chr7 (248-408)||(35887963-35888123)
chr7 (238-333)||(4237784-4237879)
chr7 (260-342)||(8015733-8015813)
chr7 (236-378)||(35068872-35069001)
chr7 (248-408)||(38260322-38260482)
chr7 (134-216)||(9157951-9158033)
chr7 (248-342)||(31769022-31769116)
chr7 (173-227)||(39174181-39174235)
chr7 (248-410)||(3777984-3778146)
chr7 (135-216)||(41815849-41815930)
chr7 (282-342)||(4069043-4069103)
chr7 (172-216)||(18800919-18800963)
chr7 (172-216)||(19933211-19933255)
chr7 (172-216)||(19964350-19964394)
chr7 (172-216)||(47778671-47778715)
chr7 (170-216)||(4910850-4910896)
chr7 (135-217)||(20123896-20123978)
chr7 (172-205)||(30082278-30082311)
chr7 (247-408)||(33153039-33153200)
chr7 (239-286)||(4068972-4069020)
chr7 (238-404)||(19492391-19492559)
chr7 (173-217)||(24151776-24151820)
chr7 (247-408)||(35084054-35084215)
chr7 (172-216)||(36576332-36576376)
chr7 (172-216)||(44600360-44600404)
chr7 (361-408)||(27810740-27810787)
chr7 (368-407)||(31549751-31549790)
chr7 (308-342)||(10248594-10248628)
chr7 (249-404)||(29713196-29713351)
chr7 (171-217)||(35069051-35069097)
chr7 (238-271)||(16562745-16562778)
chr7 (238-271)||(16602884-16602917)
chr7 (247-300)||(21654182-21654235)
chr7 (175-216)||(39337444-39337485)
chr7 (247-300)||(41890303-41890356)
chr7 (172-216)||(3157350-3157394)
chr7 (172-216)||(9818395-9818439)
chr7 (172-216)||(10720320-10720364)
chr7 (249-329)||(22369233-22369313)
chr7 (356-408)||(22369330-22369382)
chr7 (172-216)||(22631986-22632030)
chr7 (172-216)||(28843656-28843700)
chr7 (176-216)||(41889089-41889129)
chr7 (176-216)||(43108062-43108102)
chr7 (173-217)||(44877792-44877835)
[»] chr5 (80 HSPs)
chr5 (135-408)||(11261879-11262152)
chr5 (135-408)||(43589957-43590231)
chr5 (170-404)||(6686311-6686547)
chr5 (135-408)||(37562756-37563030)
chr5 (135-400)||(37522592-37522858)
chr5 (236-408)||(20644008-20644180)
chr5 (236-408)||(42273643-42273813)
chr5 (240-408)||(20039100-20039268)
chr5 (236-408)||(34425325-34425496)
chr5 (236-403)||(38130113-38130283)
chr5 (239-404)||(19413138-19413303)
chr5 (238-408)||(25840860-25841030)
chr5 (236-384)||(32110996-32111144)
chr5 (236-409)||(43454317-43454490)
chr5 (236-408)||(9957430-9957583)
chr5 (236-342)||(38280841-38280947)
chr5 (236-388)||(8225457-8225608)
chr5 (238-408)||(4463356-4463524)
chr5 (236-342)||(32017698-32017803)
chr5 (238-408)||(39505227-39505397)
chr5 (248-406)||(12912292-12912449)
chr5 (238-404)||(17351384-17351550)
chr5 (276-408)||(12792781-12792903)
chr5 (236-385)||(5984126-5984282)
chr5 (236-398)||(41625517-41625677)
chr5 (170-269)||(842698-842799)
chr5 (276-408)||(12729880-12730001)
chr5 (243-391)||(42104262-42104408)
chr5 (276-408)||(23233445-23233577)
chr5 (239-342)||(104275-104386)
chr5 (248-342)||(10153989-10154083)
chr5 (248-469)||(8506443-8506651)
chr5 (136-219)||(20643877-20643960)
chr5 (350-401)||(32019929-32019980)
chr5 (248-342)||(5369092-5369186)
chr5 (136-217)||(8225326-8225407)
chr5 (238-334)||(7071234-7071330)
chr5 (236-280)||(12730103-12730147)
chr5 (137-217)||(42273513-42273593)
chr5 (248-404)||(3463816-3463970)
chr5 (248-408)||(5736235-5736395)
chr5 (172-219)||(9957631-9957678)
chr5 (354-408)||(30893245-30893299)
chr5 (311-410)||(32079573-32079672)
chr5 (141-217)||(12730204-12730280)
chr5 (172-216)||(39505450-39505494)
chr5 (236-275)||(12792929-12792968)
chr5 (248-396)||(16153353-16153500)
chr5 (135-217)||(20038964-20039046)
chr5 (170-216)||(25840760-25840806)
chr5 (247-332)||(24439575-24439660)
chr5 (172-217)||(34425229-34425274)
chr5 (248-339)||(5659584-5659676)
chr5 (248-369)||(8959646-8959767)
chr5 (141-217)||(12793024-12793100)
chr5 (172-216)||(24439489-24439533)
chr5 (172-216)||(38130334-38130378)
chr5 (236-323)||(11858314-11858401)
chr5 (170-216)||(8143849-8143895)
chr5 (172-214)||(32079423-32079465)
chr5 (308-401)||(1144493-1144586)
chr5 (175-219)||(7071140-7071184)
chr5 (172-216)||(16286281-16286325)
chr5 (236-272)||(23233393-23233429)
chr5 (172-216)||(25962650-25962694)
chr5 (308-405)||(29307185-29307282)
chr5 (172-216)||(35462916-35462960)
chr5 (174-217)||(104437-104480)
chr5 (237-292)||(446000-446055)
chr5 (173-216)||(19413040-19413083)
chr5 (248-340)||(28907074-28907167)
chr5 (248-340)||(28943469-28943562)
chr5 (172-217)||(17351279-17351325)
chr5 (172-217)||(16153543-16153588)
chr5 (172-217)||(32110901-32110946)
chr5 (238-278)||(1238522-1238562)
chr5 (175-203)||(2002334-2002362)
chr5 (247-275)||(17825326-17825354)
chr5 (176-216)||(32433576-32433616)
chr5 (176-216)||(42364960-42365000)
[»] chr4 (91 HSPs)
chr4 (135-408)||(47867770-47868043)
chr4 (136-408)||(14332651-14332924)
chr4 (170-408)||(20281519-20281755)
chr4 (135-408)||(2229137-2229411)
chr4 (170-408)||(26916251-26916489)
chr4 (171-408)||(41414599-41414834)
chr4 (170-408)||(28668989-28669226)
chr4 (236-408)||(29203498-29203670)
chr4 (237-404)||(4058708-4058875)
chr4 (136-408)||(56318058-56318330)
chr4 (236-408)||(20716172-20716344)
chr4 (236-408)||(39078149-39078320)
chr4 (170-408)||(7654553-7654781)
chr4 (236-404)||(55580661-55580830)
chr4 (236-408)||(10069689-10069861)
chr4 (236-408)||(17794529-17794701)
chr4 (260-405)||(16604837-16604982)
chr4 (236-408)||(5483266-5483438)
chr4 (236-404)||(35310734-35310902)
chr4 (244-404)||(24940365-24940525)
chr4 (238-408)||(42915523-42915694)
chr4 (238-408)||(48793618-48793784)
chr4 (238-408)||(8683294-8683462)
chr4 (236-408)||(1585337-1585507)
chr4 (236-332)||(35529664-35529760)
chr4 (238-408)||(50080444-50080609)
chr4 (236-327)||(52535654-52535745)
chr4 (238-408)||(12002621-12002793)
chr4 (324-410)||(16473828-16473914)
chr4 (248-408)||(5064643-5064803)
chr4 (250-408)||(32203226-32203377)
chr4 (249-408)||(19351851-19352016)
chr4 (238-401)||(32323257-32323419)
chr4 (249-373)||(5815474-5815598)
chr4 (309-408)||(21722670-21722769)
chr4 (238-332)||(25297286-25297380)
chr4 (248-402)||(46070517-46070668)
chr4 (248-341)||(5841834-5841927)
chr4 (248-342)||(8178293-8178387)
chr4 (238-404)||(14583723-14583889)
chr4 (248-342)||(23978169-23978263)
chr4 (241-341)||(17186850-17186940)
chr4 (248-397)||(47516190-47516339)
chr4 (239-342)||(50145731-50145834)
chr4 (135-217)||(17186992-17187074)
chr4 (253-404)||(17799126-17799277)
chr4 (135-216)||(16605046-16605127)
chr4 (135-216)||(35529531-35529612)
chr4 (248-408)||(28142610-28142769)
chr4 (363-410)||(52535583-52535630)
chr4 (170-216)||(30012117-30012163)
chr4 (135-217)||(39078017-39078099)
chr4 (356-404)||(7438760-7438808)
chr4 (248-408)||(32410332-32410492)
chr4 (248-408)||(37911888-37912048)
chr4 (173-216)||(42915427-42915470)
chr4 (172-215)||(55580564-55580607)
chr4 (248-342)||(49080261-49080355)
chr4 (236-384)||(31280191-31280329)
chr4 (288-390)||(32280009-32280111)
chr4 (249-342)||(40553774-40553867)
chr4 (248-340)||(28318473-28318565)
chr4 (309-370)||(29511490-29511551)
chr4 (172-216)||(32012491-32012535)
chr4 (172-216)||(48793837-48793881)
chr4 (248-404)||(8013081-8013237)
chr4 (353-404)||(31532445-31532496)
chr4 (247-342)||(40411104-40411199)
chr4 (175-217)||(4058614-4058656)
chr4 (179-217)||(10069600-10069638)
chr4 (170-216)||(47516383-47516429)
chr4 (182-219)||(29203414-29203451)
chr4 (238-279)||(32280104-32280145)
chr4 (172-209)||(52535805-52535842)
chr4 (248-408)||(53848471-53848624)
chr4 (176-216)||(29180576-29180616)
chr4 (172-216)||(35310954-35310998)
chr4 (356-408)||(38140700-38140752)
chr4 (173-217)||(49080172-49080216)
chr4 (172-216)||(50768357-50768401)
chr4 (236-279)||(21722783-21722826)
chr4 (247-332)||(30011991-30012074)
chr4 (356-406)||(40411762-40411812)
chr4 (172-217)||(8013280-8013325)
chr4 (175-216)||(12002846-12002887)
chr4 (176-216)||(3043331-3043371)
chr4 (172-216)||(5222462-5222506)
chr4 (172-216)||(38187890-38187934)
chr4 (172-216)||(38940781-38940825)
chr4 (176-216)||(47806814-47806854)
chr4 (172-216)||(55937867-55937911)
[»] chr2 (71 HSPs)
chr2 (135-408)||(6110193-6110468)
chr2 (173-408)||(45085188-45085423)
chr2 (170-410)||(28599140-28599381)
chr2 (136-408)||(35517016-35517289)
chr2 (170-408)||(41528184-41528423)
chr2 (136-408)||(3201229-3201492)
chr2 (236-408)||(19264093-19264266)
chr2 (236-404)||(45660359-45660530)
chr2 (236-408)||(33198625-33198797)
chr2 (238-408)||(11617020-11617190)
chr2 (236-408)||(12938236-12938408)
chr2 (238-408)||(29524035-29524205)
chr2 (236-408)||(28858303-28858478)
chr2 (238-408)||(25572042-25572211)
chr2 (238-408)||(9864712-9864881)
chr2 (236-408)||(6765927-6766100)
chr2 (241-405)||(8701601-8701765)
chr2 (236-384)||(14873956-14874105)
chr2 (236-404)||(24204527-24204695)
chr2 (236-405)||(33677477-33677646)
chr2 (236-408)||(7645221-7645396)
chr2 (237-404)||(5963196-5963362)
chr2 (263-408)||(35115797-35115943)
chr2 (242-408)||(35022897-35023064)
chr2 (236-364)||(40584436-40584564)
chr2 (266-408)||(40808714-40808853)
chr2 (238-404)||(44454987-44455151)
chr2 (238-410)||(30830588-30830760)
chr2 (309-408)||(43415468-43415567)
chr2 (248-404)||(26998323-26998479)
chr2 (248-408)||(32010108-32010268)
chr2 (248-409)||(32273677-32273842)
chr2 (236-342)||(30421242-30421348)
chr2 (135-219)||(19263961-19264045)
chr2 (236-324)||(39696877-39696965)
chr2 (248-404)||(38071002-38071157)
chr2 (135-216)||(18834109-18834190)
chr2 (255-342)||(9709526-9709613)
chr2 (267-317)||(5280592-5280642)
chr2 (240-404)||(4707419-4707580)
chr2 (136-217)||(33198851-33198932)
chr2 (248-342)||(8032728-8032823)
chr2 (139-217)||(28858175-28858253)
chr2 (172-217)||(38070914-38070959)
chr2 (248-341)||(44442137-44442230)
chr2 (172-217)||(45660261-45660306)
chr2 (248-404)||(4891636-4891793)
chr2 (173-217)||(5280697-5280741)
chr2 (172-216)||(18454964-18455008)
chr2 (172-216)||(25571943-25571987)
chr2 (172-216)||(29524258-29524302)
chr2 (172-216)||(38549840-38549884)
chr2 (173-216)||(40808930-40808973)
chr2 (351-396)||(5280536-5280582)
chr2 (175-217)||(11616925-11616967)
chr2 (366-404)||(32428098-32428136)
chr2 (248-305)||(11031020-11031077)
chr2 (309-342)||(16494986-16495019)
chr2 (248-370)||(20380129-20380251)
chr2 (135-216)||(21539635-21539716)
chr2 (376-408)||(11825353-11825385)
chr2 (172-216)||(15068661-15068705)
chr2 (172-216)||(33635251-33635295)
chr2 (133-216)||(792553-792636)
chr2 (173-216)||(4033872-4033915)
chr2 (172-203)||(14873859-14873890)
chr2 (172-217)||(26998235-26998280)
chr2 (172-217)||(32010020-32010065)
chr2 (359-408)||(33932917-33932966)
chr2 (176-216)||(14565571-14565611)
chr2 (176-216)||(29514216-29514256)
[»] chr6 (30 HSPs)
chr6 (133-408)||(21542309-21542584)
chr6 (141-408)||(35129049-35129317)
chr6 (135-408)||(11082240-11082513)
chr6 (135-408)||(34177636-34177909)
chr6 (170-404)||(3095719-3095954)
chr6 (238-408)||(7274870-7275040)
chr6 (237-404)||(30794191-30794358)
chr6 (236-404)||(12461428-12461596)
chr6 (236-408)||(17751739-17751911)
chr6 (248-408)||(4031991-4032154)
chr6 (236-316)||(9428764-9428844)
chr6 (236-372)||(31107185-31107320)
chr6 (248-370)||(4987947-4988069)
chr6 (248-370)||(16524384-16524505)
chr6 (252-342)||(16013493-16013583)
chr6 (248-342)||(3888431-3888525)
chr6 (354-404)||(9428857-9428907)
chr6 (248-342)||(5300661-5300748)
chr6 (237-404)||(14573127-14573294)
chr6 (314-408)||(5822029-5822123)
chr6 (176-216)||(12278625-12278665)
chr6 (173-216)||(30949051-30949094)
chr6 (172-214)||(32882882-32882924)
chr6 (172-217)||(1130435-1130480)
chr6 (172-217)||(5300791-5300835)
chr6 (135-216)||(10227790-10227871)
chr6 (172-205)||(17598208-17598241)
chr6 (356-408)||(5121451-5121503)
chr6 (176-216)||(17722007-17722047)
chr6 (176-216)||(30766365-30766405)
[»] chr8 (92 HSPs)
chr8 (137-404)||(7858421-7858688)
chr8 (170-404)||(7022403-7022637)
chr8 (236-408)||(34890170-34890342)
chr8 (171-408)||(26483460-26483696)
chr8 (236-408)||(36190764-36190936)
chr8 (1-137)||(35746484-35746619)
chr8 (135-404)||(41086386-41086655)
chr8 (236-408)||(43216343-43216515)
chr8 (236-408)||(24892830-24893005)
chr8 (236-384)||(31734107-31734255)
chr8 (135-396)||(15957919-15958184)
chr8 (236-409)||(28348603-28348775)
chr8 (236-404)||(34158290-34158459)
chr8 (236-408)||(8711868-8712036)
chr8 (252-408)||(30575830-30575987)
chr8 (237-410)||(8107611-8107784)
chr8 (236-408)||(35456016-35456192)
chr8 (236-384)||(13143756-13143904)
chr8 (238-408)||(29920264-29920434)
chr8 (238-408)||(4046889-4047060)
chr8 (238-408)||(8709782-8709950)
chr8 (276-408)||(13143941-13144073)
chr8 (236-404)||(7499718-7499875)
chr8 (236-400)||(15824641-15824799)
chr8 (260-396)||(35525603-35525737)
chr8 (243-335)||(3642039-3642130)
chr8 (236-396)||(16879400-16879560)
chr8 (238-342)||(2052830-2052932)
chr8 (275-408)||(16358108-16358240)
chr8 (248-408)||(17713227-17713387)
chr8 (248-404)||(41362307-41362463)
chr8 (248-409)||(8673385-8673551)
chr8 (135-219)||(34890390-34890474)
chr8 (248-408)||(2628160-2628320)
chr8 (248-342)||(26954454-26954548)
chr8 (248-341)||(25195109-25195202)
chr8 (250-404)||(38072169-38072323)
chr8 (248-408)||(17336746-17336906)
chr8 (248-410)||(8745587-8745749)
chr8 (172-217)||(13143661-13143706)
chr8 (236-341)||(41755918-41756022)
chr8 (240-408)||(44663788-44663953)
chr8 (350-408)||(2052969-2053027)
chr8 (238-342)||(33563573-33563681)
chr8 (172-216)||(4047113-4047157)
chr8 (358-406)||(11158675-11158723)
chr8 (236-280)||(13144085-13144129)
chr8 (137-217)||(24892700-24892780)
chr8 (360-408)||(45190700-45190748)
chr8 (248-342)||(4038943-4039037)
chr8 (172-217)||(13144179-13144224)
chr8 (172-217)||(35525495-35525540)
chr8 (172-217)||(36190668-36190713)
chr8 (248-342)||(14576214-14576301)
chr8 (173-217)||(30576045-30576089)
chr8 (172-216)||(36537976-36538020)
chr8 (249-408)||(5217397-5217555)
chr8 (356-410)||(6401732-6401786)
chr8 (248-342)||(27819663-27819757)
chr8 (175-217)||(33563728-33563770)
chr8 (310-380)||(4480841-4480911)
chr8 (172-217)||(8673298-8673343)
chr8 (172-217)||(17314746-17314791)
chr8 (170-227)||(20051504-20051560)
chr8 (172-217)||(29920489-29920534)
chr8 (253-317)||(7670749-7670813)
chr8 (172-219)||(8107834-8107882)
chr8 (172-216)||(11043975-11044019)
chr8 (172-216)||(24612679-24612723)
chr8 (172-216)||(32678708-32678752)
chr8 (172-216)||(33851222-33851266)
chr8 (356-408)||(34900037-34900089)
chr8 (173-217)||(38072114-38072158)
chr8 (173-216)||(25321785-25321828)
chr8 (174-217)||(28348511-28348553)
chr8 (133-216)||(37597949-37598032)
chr8 (173-216)||(41809022-41809065)
chr8 (172-203)||(43216587-43216618)
chr8 (353-407)||(17749562-17749616)
chr8 (179-217)||(34158509-34158547)
chr8 (354-404)||(40773403-40773453)
chr8 (173-215)||(41362846-41362888)
chr8 (172-205)||(2238792-2238825)
chr8 (172-217)||(5217308-5217353)
chr8 (172-217)||(17713139-17713184)
chr8 (289-342)||(28497200-28497253)
chr8 (135-216)||(35259938-35260019)
chr8 (172-216)||(3099870-3099914)
chr8 (309-341)||(14693434-14693466)
chr8 (176-216)||(27621052-27621092)
chr8 (172-216)||(27752504-27752548)
chr8 (172-200)||(41426207-41426235)
[»] scaffold0045 (1 HSPs)
scaffold0045 (170-408)||(77885-78123)
[»] scaffold0300 (1 HSPs)
scaffold0300 (136-408)||(568-840)
[»] chr3 (112 HSPs)
chr3 (136-408)||(36546440-36546712)
chr3 (136-408)||(36561603-36561875)
chr3 (172-408)||(37042371-37042607)
chr3 (136-406)||(11054267-11054533)
chr3 (170-404)||(23311551-23311785)
chr3 (136-408)||(30189468-30189741)
chr3 (173-404)||(47864125-47864357)
chr3 (237-408)||(14752162-14752333)
chr3 (238-408)||(50650991-50651161)
chr3 (236-408)||(6075079-6075251)
chr3 (236-404)||(28875404-28875572)
chr3 (236-408)||(35963150-35963322)
chr3 (236-408)||(7866437-7866609)
chr3 (236-408)||(46711612-46711783)
chr3 (236-408)||(579099-579264)
chr3 (236-406)||(37074956-37075128)
chr3 (236-384)||(6438081-6438229)
chr3 (236-404)||(54464854-54465021)
chr3 (170-408)||(23910467-23910687)
chr3 (236-408)||(53270231-53270404)
chr3 (236-408)||(29235191-29235357)
chr3 (236-408)||(19464073-19464247)
chr3 (238-408)||(26208014-26208184)
chr3 (236-404)||(50730107-50730275)
chr3 (236-404)||(50782579-50782747)
chr3 (238-404)||(2927289-2927456)
chr3 (236-408)||(41476289-41476455)
chr3 (236-404)||(32619787-32619956)
chr3 (236-408)||(8703107-8703275)
chr3 (236-408)||(9054994-9055162)
chr3 (239-396)||(20847235-20847391)
chr3 (237-406)||(26724947-26725116)
chr3 (243-342)||(34722625-34722724)
chr3 (297-408)||(9264610-9264721)
chr3 (285-408)||(31836966-31837089)
chr3 (248-408)||(8096972-8097132)
chr3 (248-407)||(22479009-22479168)
chr3 (238-404)||(47115849-47116015)
chr3 (238-342)||(3972275-3972379)
chr3 (238-342)||(3997499-3997603)
chr3 (238-326)||(46557237-46557325)
chr3 (238-332)||(6752670-6752764)
chr3 (248-342)||(34194892-34194986)
chr3 (236-305)||(33974616-33974685)
chr3 (238-334)||(47866941-47867036)
chr3 (248-408)||(10114915-10115075)
chr3 (135-219)||(14752382-14752466)
chr3 (248-408)||(10252015-10252175)
chr3 (255-342)||(16033007-16033094)
chr3 (248-400)||(30454687-30454838)
chr3 (135-294)||(48802548-48802714)
chr3 (248-403)||(22455967-22456122)
chr3 (248-408)||(38401384-38401548)
chr3 (248-341)||(7886638-7886731)
chr3 (238-327)||(38674870-38674959)
chr3 (248-408)||(10014273-10014433)
chr3 (248-342)||(46918233-46918327)
chr3 (248-408)||(21214245-21214408)
chr3 (248-404)||(47443932-47444087)
chr3 (354-408)||(8769533-8769587)
chr3 (236-306)||(9264006-9264076)
chr3 (302-408)||(33973520-33973627)
chr3 (286-407)||(3084135-3084256)
chr3 (172-219)||(28875309-28875356)
chr3 (172-219)||(54465065-54465112)
chr3 (354-408)||(8764633-8764687)
chr3 (313-408)||(25242132-25242227)
chr3 (248-342)||(48291826-48291920)
chr3 (172-217)||(7866659-7866704)
chr3 (172-217)||(21214157-21214202)
chr3 (172-217)||(22479211-22479256)
chr3 (172-217)||(37074861-37074906)
chr3 (172-217)||(38401296-38401341)
chr3 (135-216)||(45347828-45347909)
chr3 (172-217)||(50651213-50651258)
chr3 (172-216)||(45781313-45781357)
chr3 (248-335)||(2994446-2994532)
chr3 (177-216)||(3972174-3972213)
chr3 (177-216)||(3997665-3997704)
chr3 (135-217)||(6074947-6075030)
chr3 (243-278)||(34722564-34722599)
chr3 (365-408)||(47866878-47866921)
chr3 (172-214)||(33974738-33974780)
chr3 (308-342)||(54725630-54725664)
chr3 (247-332)||(51426621-51426706)
chr3 (172-217)||(54725760-54725805)
chr3 (172-216)||(2927191-2927235)
chr3 (238-305)||(41936248-41936313)
chr3 (173-217)||(47444133-47444177)
chr3 (176-216)||(49067033-49067073)
chr3 (172-203)||(6437982-6438013)
chr3 (240-279)||(8769644-8769683)
chr3 (173-216)||(16739315-16739358)
chr3 (172-211)||(20847454-20847493)
chr3 (237-280)||(36509540-36509583)
chr3 (173-216)||(51255105-51255148)
chr3 (179-217)||(9263916-9263954)
chr3 (174-216)||(43575876-43575918)
chr3 (179-217)||(50730016-50730054)
chr3 (179-217)||(50782798-50782836)
chr3 (172-217)||(2994575-2994620)
chr3 (240-277)||(8764746-8764783)
chr3 (172-217)||(22456165-22456210)
chr3 (172-217)||(32070163-32070207)
chr3 (172-217)||(46711835-46711880)
chr3 (173-217)||(6752571-6752615)
chr3 (172-216)||(19463977-19464021)
chr3 (176-216)||(21654164-21654204)
chr3 (172-216)||(34105460-34105503)
chr3 (172-216)||(46819965-46820009)
chr3 (172-216)||(53270134-53270178)
chr3 (356-408)||(54725575-54725627)
[»] scaffold0774 (1 HSPs)
scaffold0774 (176-384)||(3447-3655)
[»] scaffold0442 (1 HSPs)
scaffold0442 (176-406)||(9979-10209)
[»] scaffold0018 (1 HSPs)
scaffold0018 (136-404)||(154755-155022)
[»] scaffold0062 (1 HSPs)
scaffold0062 (236-404)||(44770-44938)
[»] scaffold0009 (4 HSPs)
scaffold0009 (238-406)||(157790-157958)
scaffold0009 (238-329)||(52676-52767)
scaffold0009 (173-216)||(157694-157737)
scaffold0009 (179-215)||(53269-53305)
[»] scaffold0132 (4 HSPs)
scaffold0132 (236-396)||(1006-1166)
scaffold0132 (236-396)||(8966-9126)
scaffold0132 (172-217)||(911-956)
scaffold0132 (172-217)||(8871-8916)
[»] scaffold0111 (1 HSPs)
scaffold0111 (237-385)||(40174-40321)
[»] scaffold0012 (1 HSPs)
scaffold0012 (238-334)||(160246-160342)
[»] scaffold0565 (1 HSPs)
scaffold0565 (248-408)||(5870-6030)
[»] scaffold0005 (1 HSPs)
scaffold0005 (238-404)||(233486-233652)
[»] scaffold0330 (2 HSPs)
scaffold0330 (248-408)||(3174-3334)
scaffold0330 (172-217)||(3086-3131)
[»] scaffold0010 (1 HSPs)
scaffold0010 (269-408)||(160914-161053)
[»] scaffold1786 (2 HSPs)
scaffold1786 (236-279)||(858-900)
scaffold1786 (288-342)||(893-947)
[»] scaffold0495 (1 HSPs)
scaffold0495 (135-216)||(4509-4590)


Alignment Details
Target: chr1 (Bit Score: 178; Significance: 8e-96; HSPs: 117)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 132 - 402
Target Start/End: Complemental strand, 12449238 - 12448969
Alignment:
Q  132 cacatactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnn 231  Q
    ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        
T  12449238 cacatactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttt 12449139  T
Q  232 nnnngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatct 331  Q
        ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12449138 ttttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacatct 12449039  T
Q  332 tcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaat 402  Q
    |||||||||||       |||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  12449038 tcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttat-ttttaattttcttaat 12448969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 135 - 404
Target Start/End: Complemental strand, 32624274 - 32624004
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    ||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||           
T  32624274 atactccatccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttt 32624175  T
Q  235 n-gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
      ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32624174 ttgtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 32624075  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32624074 ctataaaacttttttcaaagaaaacacaaaaaactacactccaaattcttatgttttagttttcttaataa 32624004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 170 - 408
Target Start/End: Complemental strand, 39555819 - 39555581
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  39555819 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacatt 39555720  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||       |||||||||||||||| |||    
T  39555719 caatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaacttttttcaaagaaaacacaaaaaccta 39555620  T
Q  370 tactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  39555619 tactccaaattcttatgttttaattttcttaataagtgt 39555581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 135 - 408
Target Start/End: Original strand, 24190364 - 24190635
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    |||||||| ||||||||||||||||||        |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||           
T  24190364 atactcccaccgtcccataatataagcaaaaaaaacacattttctttgtaccaaaatataag-aaaaaagacaaacttttatcttttccaagattttttt 24190462  T
Q  235 ngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
       |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |     
T  24190463 ttgttattctcataaaattaaatgcaaattacatt-aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccg 24190561  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24190562 tataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 24190635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 135 - 404
Target Start/End: Complemental strand, 43667568 - 43667302
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    ||||||||||||||||||||||||||         ||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||           
T  43667568 atactccctccgtcccataatataagaaaaaaaaacacattttctttgtctcaaaatataagcaaaaaagacaaacttttatctttttcaagattttttt 43667469  T
Q  235 ngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
     ||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43667468 -gtttattctcataaaattaaatgtaaattacattcaattttctct--ctttcattttttccataaccaatggccaatgaaaattgtttttacgtcttcc 43667372  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||||       ||||||||||||||||| ||||||  |||||||||||| ||| ||||||||||||    
T  43667371 tataaaacttttttcaaagaaaacacaaaaaattatactttaaattcttatgtcttaattttcttaataa 43667302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 170 - 404
Target Start/End: Original strand, 2125965 - 2126200
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn-gtttattctcataaaattaaatgcaaattacat 268  Q
    |||||||||||||||| |||||||||| |||||||| |||||||||||||||  ||           ||| |||||||| ||||||||||||||||||||    
T  2125965 cacattttctttgtcctaaaatataagtaaaaaagacaaacttttatcttttttaaattttttttttgttcattctcattaaattaaatgcaaattacat 2126064  T
Q  269 tcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaact 368  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||    
T  2126065 tcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaact 2126164  T
Q  369 atactccaaattcttatgttttagttttcttaataa 404  Q
    ||| ||||||||||||||||||||||||||||||||    
T  2126165 atattccaaattcttatgttttagttttcttaataa 2126200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 15959807 - 15959639
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  15959807 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcct 15959708  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||       ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15959707 ataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataa 15959639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 6785450 - 6785621
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  6785450 gtttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcat 6785549  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6785550 ataaaactttttcaaaagaaaacacaaaaaactatactcc-aattcttatgttttagttttcttaataagtgt 6785621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 183 - 408
Target Start/End: Complemental strand, 32983390 - 32983167
Alignment:
Q  183 tcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacattcaattttctcttt 282  Q
    ||||||||||||||||||||||| ||| |||||||||||  ||||        |||||||||||||||||||||||||||||| |||||||||||||| |    
T  32983390 tcccaaaatataagcaaaaaagacaaatttttatcttttttaagaatttttttgtttattctcataaaattaaatgcaaattatattcaattttctctct 32983291  T
Q  283 ctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattct 382  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||| | |||| |    
T  32983290 ctttcattttttccataaccaat-gccaatgaaaattgtttttacatcttcttataaaac-ttttccaaagaaaacacaaaaaactatacttccaatttt 32983193  T
Q  383 tatgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||||||||||||    
T  32983192 tatgttttagttttcttaataagtgt 32983167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 171 - 404
Target Start/End: Original strand, 35691320 - 35691554
Alignment:
Q  171 acattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngt-ttattctcataaaattaaatgcaaattacatt 269  Q
    ||||||||||||| |||||||||||| |||||| ||||| ||||||||||| |||||         | ||||||||||||||||||||||||||||||||    
T  35691320 acattttctttgtaccaaaatataagtaaaaaaaataaatttttatctttttcaagattttttttttgttattctcataaaattaaatgcaaattacatt 35691419  T
Q  270 caattttctctttctttca-ttttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaact 368  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||| ||||||||||       ||||||||||||||||| |    
T  35691420 caattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaaatt 35691519  T
Q  369 atactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||||||||||||||||||| |||||||||||    
T  35691520 atactccaaattcttatgttttag-tttcttaataa 35691554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 6786832 - 6787004
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |    
T  6786832 gtttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttcat 6786931  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6786932 ataaaactttttccaaagaaaacacaaaaaactatactccaaattctcatgttttagttttcttaataagtgt 6787004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 171 - 406
Target Start/End: Complemental strand, 42966045 - 42965813
Alignment:
Q  171 acattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacattc 270  Q
    ||||||| |||||||||||||| ||| |||||||| |||||||||| |||| |||||        ||||||||| |||||||||||||||||||||||||    
T  42966045 acattttatttgtcccaaaatacaagtaaaaaagacaaacttttatttttttcaagattttttt-gtttattcttataaaattaaatgcaaattacattc 42965947  T
Q  271 aattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactat 370  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||     
T  42965946 aattttctctctctttcat-ttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaa-tttttccaaagaaaacacaaaaaactaa 42965849  T
Q  371 actccaaattcttatgttttagttttcttaataagt 406  Q
    ||| |||||| |||||||||||||||||||||||||    
T  42965848 acttcaaatttttatgttttagttttcttaataagt 42965813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 33369547 - 33369716
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||| | |    
T  33369547 gtttattctcataaaattaaatgcaaattacattcaattttctct--ctttcattttttccataaccaatagccaatgaaaattgtttttacatct-cat 33369643  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33369644 ataaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgt 33369716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 187 - 404
Target Start/End: Complemental strand, 28120970 - 28120754
Alignment:
Q  187 aaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacattcaattttctctttcttt 286  Q
    |||||||||| |||||||| |||||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  28120970 aaaatataagtaaaaaagacaaacttttatcttttc-aagatttcttttgtttattcacataaaattaaatgcaaattacattcaattttctctctcttt 28120872  T
Q  287 cattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatg 386  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||| ||||||        ||| ||||||||||||||||||||||| ||||||||     
T  28120871 cattttttccataatcaatagccaatgaaaattgtttttacatcttcccataaaattcattttaaaaaaaacacaaaaaactatactccacattcttatt 28120772  T
Q  387 ttttagttttcttaataa 404  Q
    | ||||||||||||||||    
T  28120771 tcttagttttcttaataa 28120754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 40718672 - 40718844
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| |||| |    
T  40718672 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctacaacttcat 40718771  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  40718772 ataaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatattttagttttcgtaataagtgt 40718844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 45226132 - 45226304
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  45226132 gtttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcct 45226231  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||| ||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  45226232 ataaaacttttttcaaagaaaatacataaaactatactctaaattattatgttttagttttcttaataagtgt 45226304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 28016911 - 28016741
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  28016911 gtttattctcataaaattaaatgcaagttacattcaattttctct--cttttattttttttataaccaatagccaatgaaaattgtttttacatcttcct 28016814  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  28016813 ataaaacatttttcaaagaaaacaccaaaaactatactctaaattcttatgttttagttttcttaataagtgt 28016741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 236 - 399
Target Start/End: Complemental strand, 39932739 - 39932576
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||| |||||| |||||| ||||||||||||| |||||| |    
T  39932739 gtttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttctt 39932640  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttctt 399  Q
    |||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39932639 ataaaacttattaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttctt 39932576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 13136717 - 13136549
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  13136717 gtttattct-ataaaattaaatgcaaattatattcaattttctct--ctttcattttttccataaccaatagccaatggaaattgtttttacatcttcct 13136621  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    || ||         |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13136620 at-aatttttttttaaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataagtgt 13136549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 236 - 407
Target Start/End: Complemental strand, 7468130 - 7467958
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  | ||| |||| ||||||||||||||| |||||||||||||    
T  7468130 gtttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatcttcct 7468031  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaacta-tactccaaattcttatgttttagttttcttaataagtg 407  Q
     ||||||       ||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||    
T  7468030 ttaaaactttttccaaagaaaacacaaaaaattattacttcaaattcttatgttttagttttcttaataagtg 7467958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 24728792 - 24728621
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||| | ||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||| ||    
T  24728792 ttattctcgtgaaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccat 24728693  T
Q  338 aaaacnnnnnnnaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||    
T  24728692 gaaacttattcgaaagaaaacacaaaaaaactatgctacaaattcttatgttttagttttcttaataagtgt 24728621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 3076291 - 3076461
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||    
T  3076291 ttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccat 3076390  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||       ||| ||||||||||||||||| || |||||||||||| |||| ||||||||||||||||    
T  3076391 aaaacttattccaaataaaacacaaaaaactatgctacaaattcttatgctttaattttcttaataagtgt 3076461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 47014657 - 47014488
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  47014657 gtttattctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcct 47014559  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       || |||||||||||||||  ||||||| |||||||||||||||||| |||| |||||||    
T  47014558 ataaaacttttttcaacgaaaacacaaaaaac--tactccagattcttatgttttagtttacttagtaagtgt 47014488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 3875188 - 3875014
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatg----gccaatgaaaattgtttttacatct 331  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||     |||||| |||||||||||||||| |    
T  3875188 gtttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttacatat 3875089  T
Q  332 tcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||       ||| |||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  3875088 tcctataaaactttttcaaaaaaaaacac--aaaactatacttcaaattcttatgttttacttttcttaataagtgt 3875014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 236 - 405
Target Start/End: Original strand, 1820409 - 1820578
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||  || |||||| ||| |||||||||||||||    
T  1820409 gtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatatt-tttttacatcttcct 1820507  T
Q  336 ataaaacnnnnnnnaaagaaaacacaa-aaaactatactccaaattcttatgttttagttttcttaataag 405  Q
    |||||||       ||| ||| ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  1820508 ataaaactttttccaaaaaaagcacaataaaactatattccaaattcttatgttttagttttcttaataag 1820578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 236 - 404
Target Start/End: Original strand, 46542978 - 46543144
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||  |||||||||| |||| ||||||| ||||||| ||||||||||| |||||||||    
T  46542978 gtttattctcataaaattaaatgcaaattgcatttaattttctct--ctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcct 46543075  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||         ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  46543076 ataaattttttttcaaagaaaacacaaaaaactatactccaaatttttatgttttagtttttttaataa 46543144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 33431555 - 33431725
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||  |||||||||| || ||||||||| ||||||||||||||||||| |||| ||||    
T  33431555 gtttattctcataaaatgaaatacaaattacatttaattttctct--ctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcct 33431652  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||| ||||||||||||||||| || |||||||||||| | |||||||||||||||||||    
T  33431653 ataaaacttttttaaaaaaaaacacaaaaaactatgctacaaattcttatgatctagttttcttaataagtgt 33431725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 237 - 410
Target Start/End: Complemental strand, 46818668 - 46818495
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||   ||||||||| |||||||| | | |||||||||||||||||||| |||||||||    
T  46818668 tttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatcttccta 46818569  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
    ||||||       |||||||| |||||||||||||||  |||||||||||||||  ||||||||||||||||||    
T  46818568 taaaacttttttcaaagaaaatacaaaaaactatactttaaattcttatgtttttcttttcttaataagtgtaa 46818495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 44148997 - 44148831
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||||||||||| || ||||||||||  |||  |||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  44148997 ttattctcatgaaattaaatgcaaattacgtttaattttctct--ctt--attttttccataaccaattgccaatgaaaattgtttttacatcttcccat 44148902  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||    
T  44148901 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcgtaataagtgt 44148831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 47600206 - 47600035
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||    
T  47600206 gtttattctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcct 47600107  T
Q  336 ataaaac-nnnnnnnaaaga--aaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||         ||||  | ||| |||||||||||||| |||||||||||||||| |||| |||||||    
T  47600106 ataaaactttttttttaagattacacaaaaaaaactatactctaaattcttatgttttaatttttttaataa 47600035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 288 - 408
Target Start/End: Original strand, 11241073 - 11241193
Alignment:
Q  288 attttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgt 387  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  11241073 attttttccataaccaatagccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgt 11241172  T
Q  388 tttagttttcttaataagtgt 408  Q
    |||| |||| |||||||||||    
T  11241173 tttaatttttttaataagtgt 11241193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 236 - 391
Target Start/End: Complemental strand, 2246181 - 2246026
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||| || |||  ||| ||| ||| ||||||||||||| ||||||||| |||||    
T  2246181 gtttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcct 2246082  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgtttta 391  Q
    |||||||       ||||||||||||||||||||||||| ||||| | ||||||||    
T  2246081 ataaaacttatttcaaagaaaacacaaaaaactatactctaaattttaatgtttta 2246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 263 - 408
Target Start/End: Complemental strand, 32742342 - 32742197
Alignment:
Q  263 ttacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaa 362  Q
    ||||||| |||||||||||||||||||||||||||||| |||||   ||||||||||||||||| || ||  ||||||||       |||||||||||||    
T  32742342 ttacatttaattttctctttctttcattttttccataatcaatgattaatgaaaattgtttttatatttttttataaaactttttttaaagaaaacacaa 32742243  T
Q  363 aaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||    
T  32742242 aaaactatactcaaaattcttatgctttagtttttttaataagtgt 32742197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 391
Target Start/End: Complemental strand, 37735550 - 37735395
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| | || |||||| ||||||| |||| |||||| |||||||||||||| ||||||     
T  37735550 gtttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttccc 37735451  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgtttta 391  Q
    || ||||       |||||||| ||||||||||||||| || ||||||||||||||    
T  37735450 atgaaacttattccaaagaaaatacaaaaaactatacttcagattcttatgtttta 37735395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 237 - 399
Target Start/End: Complemental strand, 3861859 - 3861699
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    |||||||| |||||||||||||||||||| ||| |||||| |||  |||||||||||| ||||| |||| |||||||||||||||||||||||||| | |    
T  3861859 tttattcttataaaattaaatgcaaattatatttaatttt-tctc-ctttcatttttttcataatcaatagccaatgaaaattgtttttacatctttcaa 3861762  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttctt 399  Q
    ||||||       |||||||||| |||||| |||||| |||||| ||||||||||||||||||    
T  3861761 taaaacttattctaaagaaaacataaaaaattatacttcaaattattatgttttagttttctt 3861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 7876091 - 7875935
Alignment:
Q  254 aaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat--aaaacnnnnnnnaa 351  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||| | |||| |||||| |||||||||||| ||||  ||||        ||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaaaaaaaaattcaa 7875992  T
Q  352 agaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||||||||||| | |||||| |||| ||||| ||||||||||||||||    
T  7875991 agaaaacacaaaaaactataattcaaatttttatattttaattttcttaataagtgt 7875935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 237 - 342
Target Start/End: Complemental strand, 6787155 - 6787051
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    ||||||||| ||||| |||||||||| |||||||||||| |||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  6787155 tttattctcgtaaaaataaatgcaaactacattcaattt-ctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttccta 6787057  T
Q  337 taaaac 342  Q
    ||||||    
T  6787056 taaaac 6787051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 16854139 - 16854240
Alignment:
Q  241 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaa 340  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||| |||||| ||||||||||||||| ||||| |||||    
T  16854139 ttctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaa 16854238  T
Q  341 ac 342  Q
    ||    
T  16854239 ac 16854240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 408
Target Start/End: Original strand, 52984979 - 52985099
Alignment:
Q  288 attttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgt 387  Q
    ||||| ||| ||| |||| ||||||||||||||||||||||||||||  | ||||       ||||||||||||||||||||||||||||||||||||||    
T  52984979 attttatccctaatcaatagccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaattcttatgt 52985078  T
Q  388 tttagttttcttaataagtgt 408  Q
     ||||||||||||||||||||    
T  52985079 attagttttcttaataagtgt 52985099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 342
Target Start/End: Original strand, 50369953 - 50370061
Alignment:
Q  237 tttattctcataaaattaaatgcaaatta----cattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
    ||||||||||||||||||||| |||||||    ||||||||||||||| |||||||||||||| ||||||||| ||||||  ||||||||||||||||||    
T  50369953 tttattctcataaaattaaatacaaattaattacattcaattttctctctctttcattttttc-ataaccaatagccaatagaaattgtttttacatctt 50370051  T
Q  333 cctataaaac 342  Q
    ||||||||||    
T  50370052 cctataaaac 50370061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 45840220 - 45840061
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| | |||||||||||| |||| |||   |||||||||||||||||| ||||||||||||||||         
T  45840220 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttttctataatcaactaccaatgaaaattgttttt-catcttcctataaaacatatt 45840122  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||| | |||||||||||||||  | |||| | |||||||||||||||||||||||||||    
T  45840121 tcaaaaataacacaaaaaactatgttacaaactattatgttttagttttcttaataagtgt 45840061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 5950445 - 5950539
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||| ||| | |||| ||||| |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  5950445 aaaattaaatgtaaagtgcatttaatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaac 5950539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 341
Target Start/End: Complemental strand, 10558920 - 10558818
Alignment:
Q  239 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctata 338  Q
    ||||||||| |||||||||| |||||||||| |||||| ||| |||| |||||| ||||||| |||| |||||||||||||||||||||||||||| |||    
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccata 10558821  T
Q  339 aaa 341  Q
    |||    
T  10558820 aaa 10558818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 23392332 - 23392227
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| | ||||||||||| |||||| || || ||    
T  23392332 gtttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaattatttttatatttttct 23392234  T
Q  336 ataaaac 342  Q
    |||||||    
T  23392233 ataaaac 23392227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 7397712 - 7397872
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||||| ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||          
T  7397712 aaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatt 7397811  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| |||||||||||||||  | |||| |  ||| |||||||||| |||||||||||    
T  7397812 tcaaagataacacaaaaaactatgttacaaactactatattttagtttttttaataagtgt 7397872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 385
Target Start/End: Original strand, 25391678 - 25391824
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||| ||  || |||||||| | | ||||||||||||||||||||||| ||| |    
T  25391678 gtttattctcataaaattaaatgcaaattacattcaatttt-tatctcttcca-cttctccataactattagccaatgaaaattgtttttacattttcat 25391775  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttat 385  Q
    |||||||       ||||||||||||||||| |||||| |||||||||||    
T  25391776 ataaaac-ttatctaaagaaaacacaaaaaattatacttcaaattcttat 25391824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 385
Target Start/End: Original strand, 43765290 - 43765438
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||  |||||| |||||||||| |||||||||||| | |||| |||||| | |||||| |||  |||||||||| |||||||||||||||||||    
T  43765290 ttattctcacgaaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctat 43765389  T
Q  338 aaaacnnnnnnnaaagaaaacac-aaaaaactatactccaaattcttat 385  Q
    |||||       ||||||||||| ||||||||||||| |||||| ||||    
T  43765390 aaaacttattctaaagaaaacacaaaaaaactatactacaaatttttat 43765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 5858526 - 5858432
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || ||||||||| |||||||||||||||||||| |||||||||||||||    
T  5858526 aaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaac 5858432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 238 - 401
Target Start/End: Complemental strand, 47303071 - 47302910
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttct-ctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    |||||||||| ||||||||||||||||||||||| ||||||  ||| ||||||||| | ||||| |||| |||||||||||||  |||||||||||||||    
T  47303071 ttattctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaatt-attttacatcttccta 47302973  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaa 401  Q
    | ||||        || |||||||  |||| |||||||||| ||||||| |||||||||||||||    
T  47302972 tgaaacttattcctaaaaaaacac--aaaattatactccaatttcttatattttagttttcttaa 47302910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 50012585 - 50012745
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||| |||  |||||||||||| |||||| || |||||    
T  50012585 gtttattcttataaaattaaatgcaaattacattcaattttctttctcttttattttttctataactaat-accaatgaaaattatttttatatattcct 50012683  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgtttt-agttttcttaataagtgt 408  Q
    ||             ||||||||||||||||||||||||||||||| ||| |||| | |||| |||||||||||    
T  50012684 at------------gaagaaaacacaaaaaactatactccaaattcctatattttaattttttttaataagtgt 50012745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 288 - 408
Target Start/End: Original strand, 30221771 - 30221891
Alignment:
Q  288 attttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgt 387  Q
    ||||| ||||||||||||  ||||| |||| |||||||||||||||| |||||||       ||||||||||||||||| |||| ||||| |||||||||    
T  30221771 attttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaaattatattccaagttcttatgt 30221870  T
Q  388 tttagttttcttaataagtgt 408  Q
    |||| |||||||||| |||||    
T  30221871 tttaattttcttaattagtgt 30221891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 404
Target Start/End: Original strand, 1034852 - 1035017
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| ||||||||||| |||||||||||||||| | | || |  ||||| ||  |||||||| | | |||||||||||||||| ||||||      
T  1034852 gtttattctcatgaaattaaatgcgaattacattcaatttttt-tctcatctattttctctgtaaccaatagtcgatgaaaattgtttttatatcttctc 1034950  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||       ||||||||||||||| |  |||| |||||||||||||||||| ||||||||||||    
T  1034951 ataaaacttattccaaagaaaacacaaaaca--atacgccaaattcttatgttttaattttcttaataa 1035017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 260 - 404
Target Start/End: Complemental strand, 298812 - 298667
Alignment:
Q  260 aaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaaca 359  Q
    |||||||||| ||||||||||||||| |||||| ||||||| |||| |||||| |||||  |||||||||||||| || ||||       ||||||||||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatcttcccat-aaacttattctaaagaaaaca 298714  T
Q  360 caaaaaactatactccaaat--tcttatgttttagttttcttaataa 404  Q
    ||  |||||||||| ||| |  | |||||||||||||||||||||||    
T  298713 catcaaactatacttcaagttattttatgttttagttttcttaataa 298667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 4672939 - 4672997
Alignment:
Q  350 aaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4672939 aaagaaaatacaaaaaactatactccaaattcttatattttagttttcttaataagtgt 4672997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 16688142 - 16688236
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||| ||| | || ||||||||||||| || ||||||||   |||||||||||||||||||||||||||||||||||    
T  16688142 aaaattaaatgcaaagttcatttaatatgctttttctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaac 16688236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 15959939 - 15959855
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    |||||||||||||||||||||||||||        | |||||||||||||||||||||||||||||||||| ||| |||||||||    
T  15959939 atactccctccgtcccataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaatttttatctt 15959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 37538815 - 37538975
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    |||||||| |||||| | |||||||||| |||  ||||||||||| || ||||||||   |||||||||||||| ||||||||||||||||||||         
T  37538815 aaaattaactgcaaagtgcattcaatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaacttatt 37538914  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      || || ||||||| |||||||  | |||| |  ||| ||||| ||||||||||||||||    
T  37538915 tcaaggataacacaagaaactatgttgcaaactactatattttaattttcttaataagtgt 37538975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 6787290 - 6787208
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||        | |||||||||| ||||||||||||||||||||||| |||||||||||    
T  6787290 atactccctccgtcccataatataagcaaaaaaaactcattttctttatcccaaaatataagcaaaaaagacaaacttttatc 6787208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 406
Target Start/End: Complemental strand, 25185459 - 25185300
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   ||||||||| ||||||| |||||||||||||||||         
T  25185459 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactaccaatgaaagttgttttcacatcttcctataaaacttatt 25185360  T
Q  348 nnaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagt 406  Q
      ||||| ||||| ||||||||||  | |||| |  ||||||||||||||||||||||||    
T  25185359 tcaaagataacacaaaaaaactatgttacaaactactatgttttagttttcttaataagt 25185300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 6786700 - 6786781
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||| |||||||||||||||        | |||||||||||||||||||||||||||||||||| |||||||||||    
T  6786700 tactccctccatcccataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 6786781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 8889845 - 8889758
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||| ||| | ||||||||||||||| ||||||||||| || ||||||||||       |||||||||||||||||||||||||||||    
T  8889845 aaaattaaatgtaaagtgcattcaattttctctctctttcattttctcaataaccaatg-------aaaattgtttttacatcttcctataaaac 8889758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 41063747 - 41063908
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | ||||||||||  ||| ||||| ||||| || ||||| |||  |||||||||||| |||||||||||| ||||||||          
T  41063747 aaaattaaatgcaaagtgcattcaatttgttctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttctataaaagcttat 41063846  T
Q  348 nnaaagaa-aacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
       ||||| |||||||||||||||  | |||| |  |||||||| |||||||||||||||||    
T  41063847 tttaagaataacacaaaaaactatgttgcaaactactatgttttggttttcttaataagtgt 41063908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 14086966 - 14087030
Alignment:
Q  256 atgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtt 322  Q
    |||||||||||||||||||||||||  |||| |||||||||||||| ||| ||||||||||||||||    
T  14086966 atgcaaattacattcaattttctct--cttttattttttccataactaatagccaatgaaaattgtt 14087030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 408
Target Start/End: Complemental strand, 30701524 - 30701380
Alignment:
Q  264 tacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaa 363  Q
    |||||||||||| |||| | ||||||||| || |||| |||   |||||||||||| |||| |||||||||||||||||       ||||| ||||||||    
T  30701524 tacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaa 30701425  T
Q  364 aaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||| |||  | |||| |  |||||||||||||| |||||||||||    
T  30701424 aaattatgttacaaactactatgttttagtttttttaataagtgt 30701380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 35366358 - 35366198
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    |||||||||| |||| | |||||||||| || | ||| ||||||  || |||||||||  ||||| ||||||||||||||||||| ||||||||          
T  35366358 aaaattaaattcaaagtgcattcaatttgctatctctatcatttgatcaataaccaataaccaattaaaattgtttttacatctttctataaaatttatt 35366259  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      || || ||||||| |||||||  | |||| |  ||||||||||||||||||||||||||    
T  35366258 tcaacgataacacaagaaactatgttgcaaactactatgttttagttttcttaataagtgt 35366198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 32318687 - 32318621
Alignment:
Q  276 tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||| ||| ||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  32318687 tctctctctctcattttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaac 32318621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 404
Target Start/End: Complemental strand, 52841599 - 52841444
Alignment:
Q  249 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnn 348  Q
    ||||||| |||||||| || ||| ||| ||||| ||||||||||  | ||||| |||  ||||||||||||||||| ||||||| |||| ||||          
T  52841599 aaattaagtgcaaattgcaatcattttgctcttcctttcattttccctataactaataaccaatgaaaattgttttaacatctttctatgaaacttattt 52841500  T
Q  349 naaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
     || || || |||| |||||||||| |||| | || ||||||||||||||||||||    
T  52841499 taaggataagacaagaaactatactacaaactattgtgttttagttttcttaataa 52841444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 4672798 - 4672843
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  4672798 cattttctttgtcccaaaatataagcaaaaaagataaatttttatc 4672843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 6785355 - 6785400
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6785355 cattttctttgtcacaaaatataagcaaaaaagataaacttttatc 6785400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 7468215 - 7468170
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  7468215 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7468170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 28017006 - 28016961
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  28017006 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 28016961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 341
Target Start/End: Complemental strand, 44510374 - 44510281
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaa 341  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| ||||   |||||||||||||||||||| ||||||||||||    
T  44510374 aaaattaaatgcaaagtgcattcaatttgctctccttttcattttctctataatcaattatcaatgaaaattgtttttacaacttcctataaaa 44510281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 47026655 - 47026736
Alignment:
Q  250 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaa-tggccaatgaaaattgtttttacatc 330  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||| ||||||| | ||||||||||||| ||| ||||||    
T  47026655 aattaaatgcaaattacattcaaatttttttctctttcattttttccttaaccaattagccaatgaaaattatttatacatc 47026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 44149094 - 44149050
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  44149094 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 44149050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 50665259 - 50665315
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt 294  Q
    |||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  50665259 ttattctcatgaaattaattgcaaattacatttaattttctctctctttcatttttt 50665315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 404
Target Start/End: Original strand, 50176588 - 50176684
Alignment:
Q  308 ccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||| ||||||||||||||||||||||||||||        ||||| |||||||||||||||  | |||| |  ||||||||||||||||||||||    
T  50176588 ccaataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataa 50176684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 11240907 - 11240989
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||        || ||||||||||||||| |||||||||||||| || | |||||||||    
T  11240907 atactccctccgtcccataatataagcaaaaaaatcatattttctttgtcccagaatataagcaaaaaggacacacttttatc 11240989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 13351686 - 13351780
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||| |||||||||| | ||||||||||  |||   ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||||    
T  13351686 aaaactaaatgcaaagtgcattcaatttgttctccttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 13351780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 15912204 - 15912298
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| ||  ||| |||    ||||||||||||||||||||||||||||||||||    
T  15912204 aaaattaaatgcaaactgcattcaatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctataaaac 15912298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 11241037 - 11241077
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaatttt 276  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  11241037 gtttattctcataaaattaaatgtaaattacattcaatttt 11241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 16853997 - 16854065
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaa 203  Q
    |||||||||| ||||||||||||||||        | ||||||||||||||||||||||||||||||||    
T  16853997 atactccctctgtcccataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaa 16854065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 38942686 - 38942642
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  38942686 cattttctttgtctcaaaatataagcaaaaaagatcaacttttat 38942642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 40935858 - 40935814
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  40935858 cattttctttgtctcaaaatataagcaaaaaagatcaacttttat 40935814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 40960719 - 40960675
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  40960719 cattttctttgtctcaaaatataagcaaaaaagatcaacttttat 40960675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 49924334 - 49924378
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  49924334 cattttctttgtctcaaaatataagcaaaaaagatcaacttttat 49924378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 34102127 - 34102049
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttac 327  Q
    ||||||||||||||| | ||| |||||| |||| ||||||| ||| || |||||||||  ||||||||||||||||||||    
T  34102127 aaaattaaatgcaaagtgcat-caatttgctctctctttcactttctcaataaccaataaccaatgaaaattgtttttac 34102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 35366446 - 35366401
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||    
T  35366446 cattttctttgtccaaaattataagcaaaaaagatcaacttttatc 35366401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 4529102 - 4529146
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||| |||||| ||||||||||||||||||||| |||||||||    
T  4529102 cattttttttgtctcaaaatataagcaaaaaagatcaacttttat 4529146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 408
Target Start/End: Original strand, 7190770 - 7190822
Alignment:
Q  356 aacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||| ||||||||||| ||||| | ||||||||||||| |||||||||||    
T  7190770 aacacaagaaactatactctaaattatcatgttttagtttttttaataagtgt 7190822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 29488663 - 29488707
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||    
T  29488663 cattttctttgtctcaaaatataagcaaaaaagaccaacttttat 29488707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 37538728 - 37538772
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||    
T  37538728 attttctttgtcccaaattataaacaaaaaagatcaacttttatc 37538772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 42724101 - 42724185
Alignment:
Q  249 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
    |||||||||||||||| |||| ||||| ||||  || ||||||| | |||||| |||  | ||| ||||||||||||||||||||    
T  42724101 aaattaaatgcaaattgcatttaatttgctctccctatcattttcttcataacaaataactaataaaaattgtttttacatcttc 42724185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 43359696 - 43359740
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcatttt 292  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||    
T  43359696 aaaattaaatgcaaagtacattcaatttgctctctctttcatttt 43359740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 340
Target Start/End: Original strand, 16661521 - 16661614
Alignment:
Q  248 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaa 340  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| |||||||||    
T  16661521 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctataaa 16661614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 28563437 - 28563374
Alignment:
Q  76 aaagggaaagtaagaatattttaataa-----tttagattacaattctacccttttgtcttcac 134  Q
    ||||||||||||||||||||||| |||     |||||||||||||  |||||||||||||||||    
T  28563437 aaagggaaagtaagaatattttagtaattaattttagattacaatcttacccttttgtcttcac 28563374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 36383844 - 36383887
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||| |||||| ||||||||||||||||||||| |||||||||    
T  36383844 attttatttgtcacaaaatataagcaaaaaagatcaacttttat 36383887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 45226046 - 45226081
Alignment:
Q  182 gtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||| |||||||||||||||||||||||||||||    
T  45226046 gtcccataatataagcaaaaaagataaacttttatc 45226081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 46542880 - 46542911
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaa 203  Q
    ||||||||||||||||||||||||||||||||    
T  46542880 cattttctttgtcccaaaatataagcaaaaaa 46542911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 203
Target Start/End: Complemental strand, 44056543 - 44056513
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaa 203  Q
    |||||||||||||||||||||||||||||||    
T  44056543 attttctttgtcccaaaatataagcaaaaaa 44056513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 298929 - 298884
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||| |||||| ||||||||||||| ||| |||||||    
T  298929 cattttctttgtctcaaaatgtaagcaaaaaagacaaagttttatc 298884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 1820314 - 1820359
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||| ||| |||||||||| |||||||| |||||||||||    
T  1820314 cattttctttatcctaaaatataagtaaaaaagacaaacttttatc 1820359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 408
Target Start/End: Complemental strand, 6304825 - 6304792
Alignment:
Q  375 caaattcttatgttttagttttcttaataagtgt 408  Q
    |||||| |||||||||||||||||||||||||||    
T  6304825 caaattattatgttttagttttcttaataagtgt 6304792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 7397625 - 7397670
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| ||||||||||||||   ||||||||||    
T  7397625 cattttctttgtcccaaattataagcaaaaaagcctaacttttatc 7397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 33369452 - 33369497
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||| | ||||||||||||||||| || ||||||||    
T  33369452 cattttctttgtcctagaatataagcaaaaaagacaagcttttatc 33369497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 39151315 - 39151242
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgt 321  Q
    ||||||||||| ||| | |||||||||| || | ||||||||||| || ||||| |||  ||||||||||||||    
T  39151315 aaaattaaatgtaaagtgcattcaatttgctttatctttcattttatcaataactaataaccaatgaaaattgt 39151242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 45840291 - 45840246
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||||||||||| | || |||||||    
T  45840291 cattttctttgtcccaaattataagcaaaaaagttcaaattttatc 45840246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 46949199 - 46949280
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||| | |||||||||        | ||| ||||||||| ||||||||||||||||||||  |||||||||    
T  46949199 atactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 46949280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 47026393 - 47026438
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||| | |||||||||| |||||||| |||||||||||    
T  47026393 cattttctttgttctaaaatataagtaaaaaagacaaacttttatc 47026438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 9127962 - 9128002
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  9127962 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 9128002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 26907334 - 26907290
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||| ||||||||  |||||||||    
T  26907334 cattttctttgtctcaaaatataagtaaaaaagaccaacttttat 26907290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 28017577 - 28017617
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||| || ||||||||||||||||||||| |||||||||    
T  28017577 ttctttatctcaaaatataagcaaaaaagatcaacttttat 28017617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 35189119 - 35189159
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  35189119 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 35189159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 35941760 - 35941800
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| |||||||||||||||||| || |||||||||    
T  35941760 ttctttgtctcaaaatataagcaaaaaaaatcaacttttat 35941800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 37735651 - 37735607
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||| ||||||||| | |||||||||||||||||||| ||||    
T  37735651 attttctctgtcccaaactgtaagcaaaaaagataaacttgtatc 37735607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 43359609 - 43359653
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||| |||| ||||| ||||||||||||| |||||||    
T  43359609 attttctttgtctcaaattataaacaaaaaagataaatttttatc 43359653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 44875098 - 44875138
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  44875098 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 44875138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 48566295 - 48566252
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||    
T  48566295 cattttctttatcctaaaatataag-aaaaaagataaacttttat 48566252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 177; Significance: 3e-95; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 136 - 408
Target Start/End: Original strand, 18102423 - 18102696
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||            
T  18102423 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttt 18102522  T
Q  236 -gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
     |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18102523 tgtttattctcataaaattaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 18102622  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||       ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18102623 tataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgt 18102696  T

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Target: chr7; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 136 - 408
Target Start/End: Original strand, 14805764 - 14806035
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||            
T  14805764 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaacagacaaacttttatcttttccaagatttttttt 14805863  T
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14805864 tgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 14805963  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14805964 ataaaac-tttttcaaagaaaatacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 14806035  T

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Target: chr7; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 136 - 408
Target Start/End: Original strand, 15252758 - 15253029
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||            
T  15252758 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaacagacaaacttttatcttttccaagatttttttt 15252857  T
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15252858 tgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 15252957  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15252958 ataaaac-tttttcaaagaaaatacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 15253029  T

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Target: chr7; HSP #4
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 136 - 408
Target Start/End: Complemental strand, 25737895 - 25737621
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnn--cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnn 233  Q
    ||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||          
T  25737895 tactccctccgtcccataatataagcaaaaaaaaaacacattttctttgtcccaaaatataagcaaaaaaaaaaaacttttatcttttccaagatttttt 25737796  T
Q  234 nngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25737795 tttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 25737696  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||       |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  25737695 ctataaaactttttccaaagaaaacacacaaaactataccccaaatttttatgttttagttttcttaataagtgt 25737621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 135 - 408
Target Start/End: Original strand, 45485846 - 45486121
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    |||||||||||||||||||||||||||        |||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||             
T  45485846 atactccctccgtcccataatataagcaaaaataacacattttctttgtccaaaaatataagcaaaaaagacaaaattttatcttttccaattttttttt 45485945  T
Q  235 ngtt--tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
      ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  45485946 ttttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctt 45486045  T
Q  333 cctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45486046 cctataaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgt 45486121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 135 - 408
Target Start/End: Complemental strand, 46760525 - 46760251
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    ||||||||||||||||||||||||| |        || |||||||||||||||||||||||| |||||||| |||||||||| |||| ||| |           
T  46760525 atactccctccgtcccataatataaacaaaaaaaacatattttctttgtcccaaaatataagtaaaaaagacaaacttttatttttttcaatattttttt 46760426  T
Q  235 ngt-ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
      | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46760425 tttgttattctcataaaattaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 46760326  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46760325 ctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 46760251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 136 - 404
Target Start/End: Complemental strand, 19913034 - 19912767
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        |||||||||||| |||||||||||||  |||||||| |||||||||||||||||||||            
T  19913034 tactccctccgtcccataatataagcaaaataa-cacattttctttatcccaaaatataaataaaaaagacaaacttttatcttttccaagatttttttt 19912936  T
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
      |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| || ||    
T  19912935 tgttattctcatgaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttttacattttact 19912836  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19912835 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 19912767  T

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Target: chr7; HSP #8
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 170 - 408
Target Start/End: Original strand, 35923180 - 35923417
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |          ||||||||||||||||||||||||||||||||    
T  35923180 cacattttctttgtcccaaaatataataaaaaaagataaacttttatctttttcaatatttttttttgttattctcataaaattaaatgcaaattacatt 35923279  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||       ||||||||||| ||||||||    
T  35923280 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacac-aaaaacta 35923378  T
Q  370 tactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  35923379 tactccaaatttttatgttttagttttcttaataagtgt 35923417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 25944570 - 25944742
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25944570 gtttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcct 25944669  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  25944670 ataaaactttttccaaagaaaacacaaaaacttatactccaaattcttatattttagttttcttaataagtgt 25944742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 6191039 - 6191211
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  6191039 gtttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcct 6191138  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6191139 ataaaacttttttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 6191211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 236 - 391
Target Start/End: Complemental strand, 20123846 - 20123691
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||    
T  20123846 gtttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgct 20123747  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgtttta 391  Q
    |||||||       |||||| |||||||||||||||||||||||||||||||||||    
T  20123746 ataaaactttttccaaagaatacacaaaaaactatactccaaattcttatgtttta 20123691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 47779600 - 47779770
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| ||    
T  47779600 ttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccat 47779699  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  47779700 gaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgt 47779770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 4910799 - 4910629
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  4910799 gtttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcct 4910700  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||  |||||| |||||||||||||||||||||| | |||||||||    
T  4910699 ataaaactttttctaaagaaaacacaaaaa--tatacttcaaattcttatgttttagttttttaaataagtgt 4910629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 22632085 - 22632255
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||    
T  22632085 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcccat 22632184  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       |||||||||||||||| |||| || |||| | ||||| |||||||||||||||||||||    
T  22632185 gaaacttatttcaaagaaaacacaaaaatctatgctacaaacttttatgctttagttttcttaataagtgt 22632255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 14574560 - 14574730
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| |||||| | |||||||||| | ||||| ||||| |||||||||||||| ||    
T  14574560 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatcttcccat 14574659  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  14574660 gaaacttattatcaagaaaacacaaaaaactatactccaaattcttatattttggttttcttaataagtgt 14574730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 236 - 340
Target Start/End: Complemental strand, 47557767 - 47557663
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  47557767 gtttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatcttcct 47557668  T
Q  336 ataaa 340  Q
    |||||    
T  47557667 ataaa 47557663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 276 - 404
Target Start/End: Complemental strand, 12632470 - 12632342
Alignment:
Q  276 tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactcc 375  Q
    ||||| ||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||| ||||       |||||||||| |||||||||||||||    
T  12632470 tctctctcttttattttttccacagccaatagccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaaactatactcc 12632371  T
Q  376 aaattcttatgttttagttttcttaataa 404  Q
    |||||||||||||||| ||||||||||||    
T  12632370 aaattcttatgttttaattttcttaataa 12632342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 9158084 - 9158189
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||| ||||||||||||||||||||||||||| ||| | | |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  9158084 gtttattcttataaaattaaatgcaaattacattcaaatttttttctctttcattttttc-ataaccaatggccaaagaaaattgtttttacatcttcct 9158182  T
Q  336 ataaaac 342  Q
    |||||||    
T  9158183 ataaaac 9158189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 15995715 - 15995886
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| |||||| | ||||||||||  |||||| ||||| |||||||||||| | ||    
T  15995715 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctttccat 15995814  T
Q  338 aaaacnnnnnnnaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||        |||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  15995815 gaaacttattatgaagaaaacacaaaaaaactatactccaaattcttatattttggttttcttaataagtgt 15995886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 236 - 402
Target Start/End: Original strand, 44682872 - 44683037
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| ||||||| |||||||||||| ||||||||| | ||||||| ||| |||||||||||| | |||||||||||||||||||||||||      
T  44682872 gtttattctcatgaaattaattgcaaattacatccaattttctatatctttca-tttctccataaccaatagtcaatgaaaattgtttttacatcttcgc 44682970  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaat 402  Q
    || ||||       ||| ||||||||||| | |||||||||||||||||| || |||||||||||||    
T  44682971 atcaaacttattccaaaaaaaacacaaaatattatactccaaattcttattttctagttttcttaat 44683037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 396
Target Start/End: Original strand, 11780012 - 11780171
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| | |||||  ||| | ||||| ||||| ||||||||||||||     
T  11780012 gtttattctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatagtcaatg-aaattatttttacatcttcca 11780110  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagtttt 396  Q
    ||||||        ||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  11780111 ataaaatttattttaaagaaaacacgaaaaactatattccaaattcttatattttagtttt 11780171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 134 - 279
Target Start/End: Complemental strand, 12633256 - 12633110
Alignment:
Q  134 catactccctccgtcccataatataagcnnnnnnnn-cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnn 232  Q
    ||||||||||||||| ||||||||||||         |||||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||         
T  12633256 catactccctccgtctcataatataagcaaaaaaaaacacattttttttgtcccaaaatataatcaaaatagacaaacttttatcttttccaagattttt 12633157  T
Q  233 nnngtttattctcataaaattaaatgcaaattacattcaattttctc 279  Q
       ||||||||||||||||||||||||||||||||||||||||||||    
T  12633156 tttgtttattctcataaaattaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 340
Target Start/End: Complemental strand, 2610734 - 2610630
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctt-tctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||| |||| |||||| |||||||||||| ||||| ||||| |||||||||||||| |    
T  2610734 gtttattctcatgaaattaagtgcaaattacattcaatttt-tcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctttc 2610636  T
Q  335 tataaa 340  Q
    ||||||    
T  2610635 tataaa 2610630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 16562642 - 16562731
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaa 225  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  16562642 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaatttttatcttttccaa 16562731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 16603020 - 16602931
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaa 225  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  16603020 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaatttttatcttttccaa 16602931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 16917468 - 16917637
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    ||||| |||| |||||||||||||||||| ||||||||||||| | |  ||||||  | ||||||||| |  ||||||||||||||||||||||||| ||    
T  16917468 ttattttcattaaattaaatgcaaattactttcaattttctctatttcccattttcac-ataaccaatagttaatgaaaattgtttttacatcttcccat 16917566  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       |||||||| ||||||   |||| | |||||| |||||||||| ||||||||||||||||    
T  16917567 gaaacttattccaaagaaaaaacaaaatgttatatttcaaatttttatgttttaattttcttaataagtgt 16917637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 39170540 - 39170634
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||||||| || | ||||||||||| || |||| ||||| | |||||||||||||||||||||||| ||||||||    
T  39170540 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaac 39170634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 25944438 - 25944522
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||||||    
T  25944438 atactccctccgtcccataatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 25944522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 47558012 - 47557922
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaaga 227  Q
    |||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    
T  47558012 tactccctccgtcccataatataag-aaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatgtttttcaaga 47557922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 333
Target Start/End: Complemental strand, 27810898 - 27810804
Alignment:
Q  239 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||| |||||| |  |||| ||||  ||||| ||||||||||||||||||||    
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatcttc 27810804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 31550042 - 31549964
Alignment:
Q  263 ttacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaa 341  Q
    |||||||||||||||| |||||  | ||||| ||||||||||| | |||||||| ||||||||||||||||||||||||    
T  31550042 ttacattcaattttctttttctcccctttttcccataaccaattgtcaatgaaagttgtttttacatcttcctataaaa 31549964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 37767071 - 37767017
Alignment:
Q  350 aaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  37767071 aaagaaaacacaaaaaactatactccaaattatcatgttttagttttcttaataa 37767017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 249 - 342
Target Start/End: Complemental strand, 24151734 - 24151642
Alignment:
Q  249 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||||| ||||||| |||||||||||| |||| |||||| |||| || |||||||||   || |||||||||||||||||||||||||||||||    
T  24151734 aaattacatgcaaagtacattcaatttgctctctctttc-ttttctcaataaccaataatcagtgaaaattgtttttacatcttcctataaaac 24151642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 396
Target Start/End: Original strand, 48413723 - 48413867
Alignment:
Q  244 tcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacn 343  Q
    |||| ||||||||||||||||| ||||||||||||||  |||  ||||| |||||||||||| | ||||||||||||||||| |||||||  |||||||     
T  48413723 tcatgaaattaaatgcaaatta-attcaattttctct--cttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttctcataaaact 48413819  T
Q  344 nnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagtttt 396  Q
           || |||||||  |||| ||||||||||||||||||||| |||||||    
T  48413820 tatt---aaaaaaacac--aaaattatactccaaattcttatgttgtagtttt 48413867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 35888123 - 35887963
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||| ||||||||| | |||||||||| |||| | ||| ||||| || |||| |||   | ||||||||||||||||||||||||||||||||          
T  35888123 aaaataaaatgcaaagtgcattcaatttgctctcttttttattttctctataatcaactactaatgaaaattgtttttacatcttcctataaaagttatt 35888024  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| ||||||||||| |||  | |||| |  |||||||||||||| |||||||||||    
T  35888023 tcaaagataacacaaaaaattatgttacaaactactatgttttagtttttttaataagtgt 35887963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 333
Target Start/End: Complemental strand, 4237879 - 4237784
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
    ||||||| |||||||||||||||||||| |||||||| | | | |||| |||||| | | ||| |||| |||||| |||||| |||||||||||||    
T  4237879 ttattctaataaaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaattatttttacatcttc 4237784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 342
Target Start/End: Complemental strand, 8015813 - 8015733
Alignment:
Q  260 aaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||| |||||||||||||||  ||| ||||||||| |||| ||||  ||||| |||||||||||||||||||| ||||||||    
T  8015813 aaattgcattcaattttctct--cttgcattttttctataatcaataaccaataaaaattgtttttacatcttcttataaaac 8015733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 35069001 - 35068872
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |              ||||||||| || ||| ||||||||||||||||||||||    
T  35069001 gtttattctcataatattaaatgcaaattacattcaattttttctct--------------ataaccaatagctaattaaaattgtttttacatcttcct 35068916  T
Q  336 ataaaacnnnnnnnaaagaaaacac-aaaaaactatactccaaa 378  Q
    |||||||       ||||||||||| ||||||||||| ||||||    
T  35068915 ataaaacttttttcaaagaaaacacaaaaaaactatattccaaa 35068872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 38260322 - 38260482
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||| ||||| |||| ||||||||||| || ||||  |||  |||||||||||| |||||||| ||| |||||||||         
T  38260322 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatt 38260421  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||  | |||||||||||||||| | |||| |   |||||||| |||| |||||||||||    
T  38260422 tcaagaataacacaaaaaactatattacaaactacaatgttttaatttttttaataagtgt 38260482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 9157951 - 9158033
Alignment:
Q  134 catactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||||||        |  ||||||||| ||||||||||||| ||||||||| ||||||||||    
T  9157951 catactccctccgtcccataatataagcaaaaaaaacttattttctttatcccaaaatataatcaaaaaagacaaacttttat 9158033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 31769116 - 31769022
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||||||| ||||   ||| ||||| || |||| |||    ||||||||||||||||||||||||||||||||||    
T  31769116 aaaattaaatgcaaagtgcattcaatttgctctcatttttattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaac 31769022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 39174181 - 39174235
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaaga 227  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||| |||||    
T  39174181 attttctttgttccaaaatataagtaaaaaagacaaacttttatctttttcaaga 39174235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 410
Target Start/End: Original strand, 3777984 - 3778146
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||| ||| | |||||||||| || | ||||||||||| || ||||||||||  ||||||||||| |||||| || |||||  ||||          
T  3777984 aaaattaaatgaaaagtgcattcaatttgctttctctttcattttctcaataaccaatgatcaatgaaaattatttttatattttcctggaaaaattatt 3778083  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
      || || ||||||| |||||||  | |||| |  |||||||| |||||||||||||||||||    
T  3778084 tcaaggataacacaataaactatgttgcaaactactatgttttggttttcttaataagtgtaa 3778146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 41815930 - 41815849
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||| | |||||||||        | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  41815930 atactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 41815849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 4069043 - 4069103
Alignment:
Q  282 tctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||| |||||| ||||||||||||  |||||||||||| |||||||||||| |||||||||    
T  4069043 tcttccattttctccataaccaataaccaatgaaaattctttttacatctttctataaaac 4069103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 18800963 - 18800919
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||||||||||||||||||||||| | ||||||||    
T  18800963 cattttctttgtcccaaaatataagcaaaaaagacatacttttat 18800919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 19933255 - 19933211
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  19933255 cattttctttatctcaaaatataagcaaaaaagataaacttttat 19933211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 19964394 - 19964350
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  19964394 cattttctttatctcaaaatataagcaaaaaagataaacttttat 19964350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 47778671 - 47778715
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||    
T  47778671 cattttctttgtcccaaaatataagcaaaaaagacaaatttttat 47778715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 4910896 - 4910850
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||    
T  4910896 cacattttctttgtcccaaaatataagcaaaaagaacaaacttttat 4910850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 20123978 - 20123896
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||        |  ||||| ||||||||||||||||| ||||||||| |||| ||||||    
T  20123978 atactccctccgtcccataatataagcaaaaaaaacttattttatttgtcccaaaatataatcaaaaaagacaaacgtttatc 20123896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 30082278 - 30082311
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaaga 205  Q
    ||||||||||||||||||||||||||||||||||    
T  30082278 cattttctttgtcccaaaatataagcaaaaaaga 30082311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 33153039 - 33153200
Alignment:
Q  247 taaaattaaatgcaaattacattcaattttctctttctttc-attttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnn 345  Q
    |||||||||||||||||| ||||||||||  |||  ||||| ||||| ||||||| || |  ||||| | ||||||||||||||||| | ||||||        
T  33153039 taaaattaaatgcaaattgcattcaatttgttctc-ctttctattttctccataatcattaaccaataagaattgtttttacatctttccataaaattta 33153137  T
Q  346 nnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
        ||  | ||||||||||| |||||| |||| | ||||||||| ||||| |||||||||||    
T  33153138 tttcaagaagaacacaaaaaattatacttcaaactattatgtttttgtttttttaataagtgt 33153200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 4068972 - 4069020
Alignment:
Q  239 tattctcataaaattaaatgcaaattacattcaa-ttttctctttcttt 286  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  4068972 tattctcatgaaattaaatacaaattacattcaatttttctctttcttt 4069020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 404
Target Start/End: Complemental strand, 19492559 - 19492391
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||| ||| ||||||||| ||||||| |||||||||||| | ||||  ||||| |||||||||||  | | || |||||||||||| ||| || | ||    
T  19492559 ttattcgcatgaaattaaatacaaattatattcaattttctttctcttctattttctccataaccaacagtcgataaaaattgtttttgcatattaccat 19492460  T
Q  338 aa--aacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
     |  ||        ||| |||| |||||||  ||||||| ||||| |||||||||||||||||||||||    
T  19492459 gatgaaatttattaaaaaaaaatacaaaaagttatactctaaatttttatgttttagttttcttaataa 19492391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 24151820 - 24151776
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||    
T  24151820 attttctttgtcccaaattataagcaaaaaagaccaacttttatc 24151776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 35084215 - 35084054
Alignment:
Q  247 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnn 346  Q
    |||||||||||||||||| |||| |||||  |||   ||||||||| ||||||| || |  ||||| | |||||||||||||||||  ||| ||||        
T  35084215 taaaattaaatgcaaattgcattgaatttgttctccttttcattttctccataatcattatccaataagaattgtttttacatctttttatgaaacttat 35084116  T
Q  347 nnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
       ||  | ||||||||||||||||   ||||||  | |||||||||||||||| |||||||    
T  35084115 ttcaagaagaacacaaaaaactataactcaaattactgtgttttagttttcttattaagtgt 35084054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 36576332 - 36576376
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||    
T  36576332 cattttctttgtctcaaaatataagtaaaaaagacaaacttttat 36576376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 44600360 - 44600404
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||    
T  44600360 cattttctttgtctcaaaatataagcaaaaaagaccaacttttat 44600404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 408
Target Start/End: Complemental strand, 27810787 - 27810740
Alignment:
Q  361 aaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||| |||||||||||||||||||||  ||||| |||||||||||    
T  27810787 aaaaaacaatactccaaattcttatgtttctgttttgttaataagtgt 27810740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 407
Target Start/End: Complemental strand, 31549790 - 31549751
Alignment:
Q  368 tatactccaaattcttatgttttagttttcttaataagtg 407  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  31549790 tatactccaattttttatgttttagttttcttaataagtg 31549751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 342
Target Start/End: Original strand, 10248594 - 10248628
Alignment:
Q  308 ccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||||||||||||| |||||||||    
T  10248594 ccaatgaaaattgtttttacatctttctataaaac 10248628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 404
Target Start/End: Original strand, 29713196 - 29713351
Alignment:
Q  249 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnn 348  Q
    ||||||||||||||||| ||| | | | | || ||||||||||| || ||||  |||  ||||||||||||||||||||| ||| |||| |||           
T  29713196 aaattaaatgcaaattatatttattataccctctctttcattttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttattc 29713295  T
Q  349 naaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
     |||||  |||||| |||||||||| ||||   | |||| ||||||||||||||||    
T  29713296 taaagatgacacaagaaactatactacaaacaatgatgtcttagttttcttaataa 29713351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 35069097 - 35069051
Alignment:
Q  171 acattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||| |||||||||||||||||| ||||| || |||||||||||    
T  35069097 acattttttttgtcccaaaatataagtaaaaatgacaaacttttatc 35069051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 16562745 - 16562778
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattca 271  Q
    ||||||||||||||||||||||||||||| ||||    
T  16562745 ttattctcataaaattaaatgcaaattactttca 16562778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 16602917 - 16602884
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattca 271  Q
    ||||||||||||||||||||||||||||| ||||    
T  16602917 ttattctcataaaattaaatgcaaattactttca 16602884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 21654235 - 21654182
Alignment:
Q  247 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataa 300  Q
    |||||||||||||||||||||||||||||  |||   ||||||||| |||||||    
T  21654235 taaaattaaatgcaaattacattcaatttgttctccttttcattttctccataa 21654182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 39337444 - 39337485
Alignment:
Q  175 tttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||||||| |  |||||||||    
T  39337444 tttctttgtcccaaaatataagcaaaaaataccaacttttat 39337485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 41890356 - 41890303
Alignment:
Q  247 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataa 300  Q
    |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||||    
T  41890356 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataa 41890303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 3157350 - 3157394
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||| ||||| ||||||||||||||||||||  |||||||||    
T  3157350 cattttccttgtctcaaaatataagcaaaaaagactaacttttat 3157394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 9818395 - 9818439
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||| || ||||||||||||||||||||  |||||||||    
T  9818395 cattttctttttctcaaaatataagcaaaaaagaccaacttttat 9818439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 10720320 - 10720364
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||| || ||||||||||||||||||||  |||||||||    
T  10720320 cattttctttttctcaaaatataagcaaaaaagaccaacttttat 10720364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 22369233 - 22369313
Alignment:
Q  249 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacat 329  Q
    ||||||||||||| || |||||| | | |||| ||||||||||| || ||||| |||  ||||| |||||| |||||||||    
T  22369233 aaattaaatgcaatttgcattcattatgctctctctttcattttgtctataactaataaccaataaaaattatttttacat 22369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 408
Target Start/End: Original strand, 22369330 - 22369382
Alignment:
Q  356 aacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||||||||| |||| |   || ||||||||||||||||||||||    
T  22369330 aacacaaaaaactatactacaaactacaatattttagttttcttaataagtgt 22369382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 22631986 - 22632030
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||| | |||||||||||||||| || ||||||||||    
T  22631986 cattttctttgttctaaaatataagcaaaaaggacaaacttttat 22632030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 28843700 - 28843656
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||| |||||||||||||| ||||| |||||| ||||||    
T  28843700 cattttctttatcccaaaatataagtaaaaaggataaatttttat 28843656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 41889089 - 41889129
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| |||||||||||||||||| || |||||||||    
T  41889089 ttctttgtctcaaaatataagcaaaaaaaatcaacttttat 41889129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 43108102 - 43108062
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  43108102 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 43108062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 44877792 - 44877835
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||    
T  44877792 attttctttgtcccaaaatataag-aaaaaaattaaacttttatc 44877835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 3e-95; HSPs: 80)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 135 - 408
Target Start/End: Complemental strand, 11262152 - 11261879
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||           
T  11262152 atactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaacttttatcttttccaagattttttt 11262053  T
Q  235 ngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11262052 tgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcc 11261953  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||       ||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||    
T  11261952 tataaaacttttttcaaagaaaacacaaaaaattatactccaaattctcatgtgttagtttacttaataagtgt 11261879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 135 - 408
Target Start/End: Complemental strand, 43590231 - 43589957
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnn-cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnn 233  Q
    |||||||||||||||||||||||||||         |||||||||||||| ||||||||||||||||||| | ||||||||||||||| |||||          
T  43590231 atactccctccgtcccataatataagcaaaaaaaaacacattttctttgtaccaaaatataagcaaaaaatacaaacttttatctttttcaagatttttt 43590132  T
Q  234 nngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  43590131 tttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctcc 43590032  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43590031 ctataaaactttttcaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 43589957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 170 - 404
Target Start/End: Original strand, 6686311 - 6686547
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngt-ttattctcataaaattaaatgcaaattacat 268  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||         | |||||||||||||||||||||||||||||||    
T  6686311 cacattttctttgtcccaaaatataaacaaaaaagataaacttttatcttttccaagattttttttttgttattctcataaaattaaatgcaaattacat 6686410  T
Q  269 tcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac-nnnnnnnaaagaaaacacaaaaaac 367  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  6686411 tcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttccaaagaaaacacaaaaaac 6686510  T
Q  368 tatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||||||||||||||||||||||||||||||||    
T  6686511 tatactccaaattcttatgttttagttttcttaataa 6686547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 135 - 408
Target Start/End: Complemental strand, 37563030 - 37562756
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    ||||||| |||||||||||||||||||        ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||           
T  37563030 atactccatccgtcccataatataagcaaaaaaaacacattttcttcgtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttt 37562931  T
Q  235 ngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| || |||||||||||||||||||||||||    
T  37562930 tgtttattctcataaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagctaatgaaaattgtttttacatcttcc 37562831  T
Q  335 tataaaac-nnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||        ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37562830 tataaaactttttccaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 37562756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 135 - 400
Target Start/End: Complemental strand, 37522858 - 37522592
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    |||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||           
T  37522858 atactccctccgtcccataatataagcaaaaaaaacacattttcttcgtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttt 37522759  T
Q  235 ngtttattctcataaaa-ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
     || ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  37522758 tgtctattctcataaaaattaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatcttc 37522659  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttctta 400  Q
    |||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37522658 ctataaaactttttccaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttctta 37522592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 20644008 - 20644180
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20644008 gtttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 20644107  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20644108 ataaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgt 20644180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 42273643 - 42273813
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||||||||||| |    
T  42273643 gtttattctcataaaattaaatgcaaattgcattcaattttctct--ctttcattttctccataaccaatagccaatgaaaattgtttttacatcttctt 42273740  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42273741 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 42273813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 240 - 408
Target Start/End: Original strand, 20039100 - 20039268
Alignment:
Q  240 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataa 339  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||||    
T  20039100 attctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctataa 20039199  T
Q  340 aacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||       ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20039200 aacctttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgt 20039268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 34425325 - 34425496
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| |||||| |||| ||||||||||||||||||||||| |||||    
T  34425325 gtttattctcataaaattaaatgcaaattatattcaattttctctctcttttattttt-ccataatcaatagccaatgaaaattgtttttacatattcct 34425423  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34425424 ataaaacttttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgt 34425496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 236 - 403
Target Start/End: Complemental strand, 38130283 - 38130113
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||    
T  38130283 gtttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcct 38130184  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaa---actatactccaaattcttatgttttagttttcttaata 403  Q
    |||||||       ||||||||||||||||   |||||| |||||||||||||||||||||||||||||||    
T  38130183 ataaaactttttctaaagaaaacacaaaaaactactatattccaaattcttatgttttagttttcttaata 38130113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 239 - 404
Target Start/End: Original strand, 19413138 - 19413303
Alignment:
Q  239 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctata 338  Q
    ||||||||| ||||||||||||||||||||| ||||||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccata 19413237  T
Q  339 aaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||       ||||||||||||||||||||| || |||||||||||  |||||||||||||||||    
T  19413238 aaacttatttcaaagaaaacacaaaaaactatgctacaaattcttatactttagttttcttaataa 19413303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 25840860 - 25841030
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| | |||||||||||||||||||||||||| ||    
T  25840860 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccat 25840959  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||||||||||||||||||||| || |||||| ||||| |||||||||||||||||||||    
T  25840960 gaaacttattccaaagaaaacacaaaaaactatgctacaaatttttatgctttagttttcttaataagtgt 25841030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 236 - 384
Target Start/End: Original strand, 32110996 - 32111144
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  32110996 gtttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcct 32111095  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattctta 384  Q
    || ||||       ||||||||||||||| | |||||||||||||||||    
T  32111096 atgaaacttttttcaaagaaaacacaaaacattatactccaaattctta 32111144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 236 - 409
Target Start/End: Complemental strand, 43454490 - 43454317
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| | | |||||||| |  |||||||||||||||||||| |||||    
T  43454490 gtttaatctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcct 43454391  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgta 409  Q
    |||||||       |||||||||||||||||||||| | ||| ||||||||||||| |||||||||||||||||    
T  43454390 ataaaacttatgacaaagaaaacacaaaaaactatatttcaagttcttatgttttaattttcttaataagtgta 43454317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 9957583 - 9957430
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||||||||     
T  9957583 gtttattctcataaaattaaatgcaaattacattcaactttctc--tctttcatttttt-cataaccaatagccaatgaaaattgtttttacatcttcc- 9957488  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
                  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  9957487 --------------aaagaaaacac-aaaaactatactccaaattctcatgttttagttttcttaataagtgt 9957430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 38280841 - 38280947
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||| |||||    
T  38280841 gtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcct 38280940  T
Q  336 ataaaac 342  Q
    |||||||    
T  38280941 ataaaac 38280947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 236 - 388
Target Start/End: Original strand, 8225457 - 8225608
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaa-attgtttttacatcttcc 334  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||||||||  || ||||||||| ||||    
T  8225457 gtttattctcataaaattaaatgcaaattacgttcaattttctc--tctttcattttttccataaccaatagccaatgaaattttttttttacattttcc 8225554  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgtt 388  Q
    ||||||||       |||||||| ||||||||||||| ||||||||||| ||||    
T  8225555 tataaaactttttccaaagaaaatacaaaaaactatagtccaaattcttttgtt 8225608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 4463356 - 4463524
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||| ||||| ||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||    
T  4463356 ttatactcatgaaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcccat 4463455  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     || |       |||||||||||  | ||| || || |||||||||||| |||||||||||||||||||||    
T  4463456 gaagcttattccaaagaaaacac--acaaccatgctacaaattcttatgctttagttttcttaataagtgt 4463524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 32017698 - 32017803
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |||||||||||||||| | |||||||||||||||||||||||||||    
T  32017698 gtttattctcataaaattaaatgcaaattacattcaactttctctctctttc-gtttttccataaccaatagacaatgaaaattgtttttacatcttcct 32017796  T
Q  336 ataaaac 342  Q
    |||||||    
T  32017797 ataaaac 32017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 39505397 - 39505227
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| | |||||||||||| ||| |||||||||||||||||||||||||| | ||    
T  39505397 ttattctcatgaaattaaatgcaaattacatttaattttctctctctttta-tttttccataacgaattgccaatgaaaattgtttttacatcttaccat 39505299  T
Q  338 aaaacnnnnnnnaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||       ||||||||||| |||||||||| || |||||||||||  |||| |||| |||||||||||    
T  39505298 aaaacttattccaaagaaaacacaaaaaaactatgctacaaattcttatactttaatttttttaataagtgt 39505227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 248 - 406
Target Start/End: Complemental strand, 12912449 - 12912292
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||| ||||| |||| |||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||         
T  12912449 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaacttatt 12912350  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 406  Q
      ||||| |||||||||||||||| ||||| | | ||||||||||||||||||||||||    
T  12912349 tcaaagataacacaaaaaactatattccaactac-tatgttttagttttcttaataagt 12912292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 17351384 - 17351550
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||| ||||||||||||||||||||| | | ||||||| ||||||| |||| |||||| ||||||||||||||||||| | ||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccat 17351483  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||       || ||||| | ||||||||||||||||| || ||| || ||||||||||||||||    
T  17351484 aaaacttattccaacgaaaataaaaaaaactatactccaagtttttacgtattagttttcttaataa 17351550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 276 - 408
Target Start/End: Complemental strand, 12792903 - 12792781
Alignment:
Q  276 tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactcc 375  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||||||         |||||||||||||||||||||||||    
T  12792903 tctctctctttcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa---------aagaaaacacaaaaaactatactcc 12792814  T
Q  376 aaattcttatgttttagttttcttaataagtgt 408  Q
    || |||||||||||||||||| |||||||||||    
T  12792813 aatttcttatgttttagtttttttaataagtgt 12792781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 385
Target Start/End: Complemental strand, 5984282 - 5984126
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaat-------gaaaattgtttttaca 328  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||| ||||||||||| || |||||||||  |||||       ||||||||||||||||    
T  5984282 gtttattctcataaaattaaatgtaaattacattaaatattctctctctttcattttctctataaccaataaccaatagtcaatgaaaattgtttttaca 5984183  T
Q  329 tcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttat 385  Q
    | || |||||||||       ||||||||||||||||||||||||| ||||||||||    
T  5984182 tatttctataaaacttattccaaagaaaacacaaaaaactatactctaaattcttat 5984126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 398
Target Start/End: Complemental strand, 41625677 - 41625517
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||| |||| ||||||||| ||||||||||| ||||||| || |||| |||||||| ||||| |||| || |||||||||  |||||||||||||||    
T  41625677 gtttattttcatgaaattaaattcaaattacatttaattttccctctcttccatttttt-cataatcaatagcgaatgaaaataatttttacatcttcct 41625579  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttct 398  Q
    || ||||       |||||||||||||||||||||| |  |||||||||||||||||||||||    
T  41625578 atgaaacttatttcaaagaaaacacaaaaaactata-tttaaattcttatgttttagttttct 41625517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 842799 - 842698
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngt--ttattctcataaaattaaatgcaaattaca 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |  ||||||||||||||||||||||||||||||    
T  842799 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagatttttttttttattattctcataaaattaaatgcaaattaca 842700  T
Q  268 tt 269  Q
    ||    
T  842699 tt 842698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 276 - 408
Target Start/End: Complemental strand, 12730001 - 12729880
Alignment:
Q  276 tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactcc 375  Q
    ||||| ||| ||||||| |||||||||||| ||||||||||||||| ||||| |||||||||||||         |||||||||||||||||||||||||    
T  12730001 tctctctctctcattttctccataaccaatagccaatgaaaattgtctttac-tcttcctataaaa---------aagaaaacacaaaaaactatactcc 12729912  T
Q  376 aaattcttatgttttagttttcttaataagtgt 408  Q
    || |||||||||||||||||| |||||||||||    
T  12729911 aatttcttatgttttagtttt-ttaataagtgt 12729880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 243 - 391
Target Start/End: Complemental strand, 42104408 - 42104262
Alignment:
Q  243 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||| |||||||||||||| ||||||||||||| ||  |||| |||||| |||||||  ||| |||||||||||||||||||||||||||| || ||||    
T  42104408 ctcatgaaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaac 42104309  T
Q  343 nnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgtttta 391  Q
           ||||| |||||  |||| ||||||||||||||||||||||||    
T  42104308 ttgttccaaagagaacac--aaaattatactccaaattcttatgtttta 42104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 276 - 408
Target Start/End: Original strand, 23233445 - 23233577
Alignment:
Q  276 tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactcc 375  Q
    ||||| ||||||||||| |||||||||||| |  ||| |||| ||||||||||| ||||||||||         |||||||||||||||||||||||  |    
T  23233445 tctctctctttcattttctccataaccaatagttaataaaaactgtttttacatattcctataaagttgttttcaaagaaaacacaaaaaactatacgtc 23233544  T
Q  376 aaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||| ||||| |||||||||    
T  23233545 aaattcttatgttttagatttctcaataagtgt 23233577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 239 - 342
Target Start/End: Complemental strand, 104386 - 104275
Alignment:
Q  239 tattctcataaaattaaatgcaaattacattcaattttctctttct--------ttcattttttccataaccaatggccaatgaaaattgtttttacatc 330  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||| |||||| ||| || |||||||||||||||||||||    
T  104386 tattctcataaaattaaatgcatattacattcaattttctctctctctctctctttcatttttttcataactaatagctaatgaaaattgtttttacatc 104287  T
Q  331 ttcctataaaac 342  Q
    || |||||||||    
T  104286 tttctataaaac 104275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 10154083 - 10153989
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||||||| || | ||||||||||| || || ||||||  |||||||||||||||||||||||||||||||||||    
T  10154083 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaac 10153989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 469
Target Start/End: Original strand, 8506443 - 8506651
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || ||||||      |||||||||||||||||||||||| |||||||||         
T  8506443 aaaattaaatgcaaagtgcattcaatttgctctatctttcattttctcaataacc------caatgaaaattgtttttacatctttctataaaacttatt 8506536  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtaannnnnnnnnnnnnnnngcttataatatgggaaggagg 447  Q
      || || |||| || |||||||  | |||| |  ||||||||||||||||||||||||||||                 |||||||||||||| |||||    
T  8506537 tcaaggataacataagaaactatgttgcaaactactatgttttagttttcttaataagtgtaatttttttttc-------cttataatatgggacggagg 8506629  T
Q  448 gagtatttggttctaccgtgac 469  Q
    ||||||||||||||||||||||    
T  8506630 gagtatttggttctaccgtgac 8506651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 20643877 - 20643960
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    ||||||||||||||||||||||||||        | |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  20643877 tactccctccgtcccataatataagcaaaaaaaactcattttctttatcccaaaatataagcaaaaaagacaaacttttatctt 20643960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 32019929 - 32019980
Alignment:
Q  350 aaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaa 401  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32019929 aaagaaaacacagaaaactatactccaaattcttatgttttagttttcttaa 32019980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 5369186 - 5369092
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | ||||||||   | || ||||||||||| || ||||||||   |||||||||||||||||||||||||||||||||||    
T  5369186 aaaattaaatgcaaagtgcattcaataagccctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaac 5369092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 8225326 - 8225407
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||||    
T  8225326 tactccctccgtcccataatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 8225407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 334
Target Start/End: Original strand, 7071234 - 7071330
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    |||||||||| ||||||||| ||||||||||||||||||| |  |||| |||||| ||| ||| |||| | ||||||||||| ||||||||| ||||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacattttcc 7071330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 12730147 - 12730103
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctct 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12730147 gtttattctcataaaattaaatgcaaattacattcaattttctct 12730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 42273513 - 42273593
Alignment:
Q  137 actccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||| |||||||||||||        | |||||||||||||||||||||||||||||||||| |||||||||||    
T  42273513 actccctccgttccataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 42273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 404
Target Start/End: Complemental strand, 3463970 - 3463816
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||| ||||||||||||| |||||||||||||||         
T  3463970 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatt 3463871  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
      ||||| ||||| |||||||||  | |||| |  ||||||||||||||||||||||    
T  3463870 tcaaagataacac-aaaaactatgttacaaact-gtatgttttagttttcttaataa 3463816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 5736395 - 5736235
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | | |||||||| ||||  |||||||||| ||  ||| ||| | | ||||||||||||||||||| ||||||||||||          
T  5736395 aaaattaaatgcaaaatgcgttcaatttgctctccctttcattttctctgtaatcaacgacaaatgaaaattgtttttacaacttcctataaaatttatt 5736296  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| |||| ||||||||||  | |||| |  ||||||||| ||||||||||||||||    
T  5736295 tcaaagataacataaaaaactatgttacaaactactatgttttaattttcttaataagtgt 5736235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 9957678 - 9957631
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  9957678 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 9957631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 30893299 - 30893245
Alignment:
Q  354 aaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  30893299 aaaacacaagaaactatactccaaattatcatgttttagttttcttaataagtgt 30893245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 32079573 - 32079672
Alignment:
Q  311 atgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
    |||||||||||||||||||||| | || ||||       || || |||| ||||||||||| |||||||| | |||||||||||||||||||||||||||    
T  32079573 atgaaaattgtttttacatctttccattaaactaatttcaaggagaacataaaaaactataatccaaattataatgttttagttttcttaataagtgtaa 32079672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 12730280 - 12730204
Alignment:
Q  141 cctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||        | ||||||||||||||||||||||||| |||||||| |||||||||||    
T  12730280 cctccgtcccataatataagcaagaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttatc 12730204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 39505494 - 39505450
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  39505494 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 39505450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 12792968 - 12792929
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattt 275  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12792968 gtttattctcataaaattaaatgcaaattacattcaattt 12792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 396
Target Start/End: Complemental strand, 16153500 - 16153353
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    |||||||||| |||| | |||| ||||| |||| | ||||| ||| || |||| |||   ||||||||||| |||||||||||||||||||||||         
T  16153500 aaaattaaatacaaagtgcatttaatttgctctctttttcactttctctataatcaactaccaatgaaaat-gtttttacatcttcctataaaacttatt 16153402  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagtttt 396  Q
      ||||| |||||||||||||||  | |||| | |||||||||||||||    
T  16153401 tcaaagataacacaaaaaactatgttacaaactattatgttttagtttt 16153353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 20038964 - 20039046
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||        | |||||| ||||||||| ||||||||||||| ||| |||||||||||    
T  20038964 atactccctccgtcccataatataagcaaaaaaaactcattttttttgtcccacaatataagcaaaacagacaaacttttatc 20039046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 25840760 - 25840806
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||    
T  25840760 cacattttctttgtcccaaaatataagcaaaaatgacaaacttttat 25840806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 332
Target Start/End: Original strand, 24439575 - 24439660
Alignment:
Q  247 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
    |||||||||||||||||| ||||||||||  |||   ||| |||||||||||||  | | |||||||| |||||||||||||||||    
T  24439575 taaaattaaatgcaaattgcattcaatttgttctcctttttattttttccataataattagccaatgataattgtttttacatctt 24439660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 34425229 - 34425274
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||    
T  34425229 cattttctttgtcctaaaatataagcaaaaaagacaaacttttatc 34425274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 339
Target Start/End: Complemental strand, 5659676 - 5659584
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctct-ttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataa 339  Q
    ||||||||||| ||| | |||||||||| || | || |||||||||||| |||| |||   ||||| ||||||||||||||||||||||||||    
T  5659676 aaaattaaatgtaaagtgcattcaatttgctttcttttttcattttttctataatcaactaccaataaaaattgtttttacatcttcctataa 5659584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 369
Target Start/End: Original strand, 8959646 - 8959767
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||| ||| | | |||||||| |||| | || |||||| || |||| |||    ||||||||||||||||||||||||||||||||||         
T  8959646 aaaattaaatgtaaagtgcgttcaatttgctctcttttccattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatt 8959745  T
Q  348 nnaaagaaaacacaaaaaacta 369  Q
      ||||| ||||||||||||||    
T  8959746 tcaaagataacacaaaaaacta 8959767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 12793100 - 12793024
Alignment:
Q  141 cctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||        | |||||||||||| ||||||||||||||||||| | |||||||||||    
T  12793100 cctccgtcccataatataagcaagaaaaactcattttctttgttccaaaatataagcaaaaaatacaaacttttatc 12793024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 24439489 - 24439533
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  24439489 cattttctttgtcgcaaaatataagcaaaaaagatcaacttttat 24439533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 38130378 - 38130334
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  38130378 cattttctttgtcccaaaatataagtaaaaaagataaatttttat 38130334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 323
Target Start/End: Original strand, 11858314 - 11858401
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgttt 323  Q
    |||||||||||| || |||||| |||||||| ||||||||| ||| | || |||||| ||||||| ||||  ||||| ||||||||||    
T  11858314 gtttattctcatgaacttaaatacaaattacgttcaattttttctcttttccattttctccataatcaataaccaataaaaattgttt 11858401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 8143849 - 8143895
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||    
T  8143849 cacattttttttgtcccataatataagcaaaaaagatcaacttttat 8143895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 32079423 - 32079465
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaactttt 214  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  32079423 cattttctttgttccaaattataagcaaaaaagataaactttt 32079465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 401
Target Start/End: Complemental strand, 1144586 - 1144493
Alignment:
Q  308 ccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaa 401  Q
    |||||||||||||||||||||| |||||||||||        ||||| |||||||||||||||  | |||| |  |||| ||||||||||||||    
T  1144586 ccaatgaaaattgtttttacatattcctataaaatttattttaaagataacacaaaaaactatgttacaaactactatggtttagttttcttaa 1144493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 7071140 - 7071184
Alignment:
Q  175 tttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||    
T  7071140 tttctttgtaccaaaatataagcgaaaaagacaaacttttatctt 7071184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 16286325 - 16286281
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||    
T  16286325 cattttctttgtctcaaaatataagtaaaaaagacaaacttttat 16286281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 23233393 - 23233429
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaa 272  Q
    |||||||||||||||| ||||||||||||||||||||    
T  23233393 gtttattctcataaaaataaatgcaaattacattcaa 23233429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 25962694 - 25962650
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| |||||||||||||||||| | ||||||||||    
T  25962694 cattttctttgtctcaaaatataagcaaaaaatacaaacttttat 25962650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 405
Target Start/End: Complemental strand, 29307282 - 29307185
Alignment:
Q  308 ccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataag 405  Q
    |||||||||||| ||||||||||||||||||||||       |||||  |||||||||||||   | |||| |  ||| |||||||||||||||||||    
T  29307282 ccaatgaaaattatttttacatcttcctataaaacttattttaaagattacacaaaaaactacgttacaaactactatattttagttttcttaataag 29307185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 35462960 - 35462916
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||    
T  35462960 cattttctttgtctcaaaatataagcaaaaaagaccaacttttat 35462916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 104480 - 104437
Alignment:
Q  174 ttttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||| |||||||||||||||| |||||||| |||||||||||    
T  104480 ttttctctgtcccaaaatataagtaaaaaagacaaacttttatc 104437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 446055 - 446000
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttt 292  Q
    |||||| |||| |||||||||| ||||| ||||||||||| ||| |||||||||||    
T  446055 tttattatcatgaaattaaatgaaaattgcattcaattttttctctctttcatttt 446000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 19413040 - 19413083
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||  |||| ||||||||||||||||||||||||||||||    
T  19413040 attttctcagtcctaaaatataagcaaaaaagataaacttttat 19413083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 340
Target Start/End: Original strand, 28907074 - 28907167
Alignment:
Q  248 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaa 340  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| |||||||||    
T  28907074 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctataaa 28907167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 340
Target Start/End: Original strand, 28943469 - 28943562
Alignment:
Q  248 aaaattaaatgcaaattacattcaattt--tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaa 340  Q
    ||||||||||||||| | ||||||||||  ||||||| ||||||||| || | || |||   ||||| ||||||||||||||||| |||||||||    
T  28943469 aaaattaaatgcaaagtgcattcaatttgttctcttt-tttcattttctctagaatcaactaccaataaaaattgtttttacatcctcctataaa 28943562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 17351279 - 17351325
Alignment:
Q  172 cattttctttgtcccaaaata-taagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||    
T  17351279 cattttctttgtcccaaaattgtaagcaaaaaagacaaacttttatc 17351325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 16153588 - 16153543
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||| |||||||||||  |||||||||||||| |||||||||||    
T  16153588 cattttgtttgtcccaaatgataagcaaaaaagacaaacttttatc 16153543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 32110901 - 32110946
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||| ||| ||||||||||||||||||| |||| ||||||    
T  32110901 cattttctttatcctaaaatataagcaaaaaagacaaacatttatc 32110946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 1238522 - 1238562
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttct 278  Q
    ||||||| |||||||||||  ||||||||||||||||||||    
T  1238522 ttattcttataaaattaaaaacaaattacattcaattttct 1238562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 203
Target Start/End: Complemental strand, 2002362 - 2002334
Alignment:
Q  175 tttctttgtcccaaaatataagcaaaaaa 203  Q
    |||||||||||||||||||||||||||||    
T  2002362 tttctttgtcccaaaatataagcaaaaaa 2002334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 275
Target Start/End: Complemental strand, 17825354 - 17825326
Alignment:
Q  247 taaaattaaatgcaaattacattcaattt 275  Q
    |||||||||||||||||||||||||||||    
T  17825354 taaaattaaatgcaaattacattcaattt 17825326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 32433576 - 32433616
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| |||||||||||||||||||| ||| ||||||    
T  32433576 ttctttgtctcaaaatataagcaaaaaagacaaatttttat 32433616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 42364960 - 42365000
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  42364960 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 42365000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 3e-95; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 135 - 408
Target Start/End: Original strand, 47867770 - 47868043
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    |||||||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||           
T  47867770 atactccctctgtcccataatataagcaaaaaaaatacattttctttgtcccaaaatataagcaaaaaagaaaaacttttatctttttcaagattttttt 47867869  T
Q  235 ngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47867870 ttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcc 47867969  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47867970 tataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 47868043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 136 - 408
Target Start/End: Original strand, 14332651 - 14332924
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    |||||||||||| |||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||            
T  14332651 tactccctccgttccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttt 14332750  T
Q  236 -gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  14332751 tgtttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcc 14332850  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||       |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14332851 tataaaactttttccaaagaaaacacaaaaaaccatattccaaattcttatgttttagttttcttaataagtgt 14332924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 170 - 408
Target Start/End: Original strand, 20281519 - 20281755
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    |||||||||||||| ||||||||||||||||||||| |  ||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  20281519 cacattttctttgttccaaaatataagcaaaaaagaca--cttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacatt 20281616  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  20281617 caattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaacta 20281716  T
Q  370 tactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20281717 tactccaaattcttatgttttagttttcttaataagtgt 20281755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 135 - 408
Target Start/End: Original strand, 2229137 - 2229411
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnn-cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnn 233  Q
    |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |          
T  2229137 atactccctccgtcccataatataagcaaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaatatttttt 2229236  T
Q  234 nngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
        |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  2229237 tttgttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttc 2229336  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2229337 ctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 2229411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 170 - 408
Target Start/End: Original strand, 26916251 - 26916489
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||        ||||||||||||||||||||||||||||||||||    
T  26916251 cacattttctttgtctcaaaatataagcaaaaaagataaacttttatccttttcaagattttttttgtttattctcataaaattaaatgcaaattacatt 26916350  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    ||||||| | |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||       |||||||||||||||||| |    
T  26916351 caattttatttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaacca 26916450  T
Q  370 tactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26916451 tactccaaattcttatgttttagttttcttaataagtgt 26916489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 171 - 408
Target Start/End: Complemental strand, 41414834 - 41414599
Alignment:
Q  171 acattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacattc 270  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||        ||||||||| |||||||||||||||||||||||||    
T  41414834 acattttctttgtcccaaaatataagtaaaaaagacaaacttttatctttttcaagattttttt-gtttattcttataaaattaaatgcaaattacattc 41414736  T
Q  271 aattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactat 370  Q
    |||||| ||| |||||||||||||| |||| |||| |||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  41414735 aattttttctctctttcattttttc-ataatcaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 41414637  T
Q  371 actccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||| |||||||||||||||||||||||||||||||    
T  41414636 actccatattcttatgttttagttttcttaataagtgt 41414599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 170 - 408
Target Start/End: Complemental strand, 28669226 - 28668989
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||||        |||||||||||||||||||||| |||||||||||    
T  28669226 cacattttctttgtcccaaaatataagcaaaaaggacaaatttttatctttttcaagattttttttgtttattctcataaaattaaatacaaattacatt 28669127  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    ||||||||||| ||||||||||||| |||||| |||  |||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||    
T  28669126 caattttctctctctttcatttttt-cataactaataaccaatgaaaattgtttttacattttcctataaaaccttttctaaagaaaacacaaaaaacta 28669028  T
Q  370 tactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||  |||||||||||||||||||||||||||||||||    
T  28669027 tactttaaattcttatgttttagttttcttaataagtgt 28668989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 29203498 - 29203670
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29203498 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 29203597  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||        ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29203598 ataaaaaaatttgcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgt 29203670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 237 - 404
Target Start/End: Original strand, 4058708 - 4058875
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  4058708 tttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttccta 4058807  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4058808 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 4058875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 136 - 408
Target Start/End: Complemental strand, 56318330 - 56318058
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    |||||||| | |||||||||||||||        |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |            
T  56318330 tactcccttcatcccataatataagcaaaaaaaacacatttt-tttgtcccaaaatataagcaaaaaagacatacttttatcttttccaatatttttttt 56318232  T
Q  236 -gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
     ||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  56318231 tgtttattatcataaaattaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatcttcc 56318132  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||| |       |||||||||||||||||| |||||| |||||||||||||||| |||| |||||||||||    
T  56318131 tataaacctttttccaaagaaaacacaaaaaaccatactctaaattcttatgttttaatttttttaataagtgt 56318058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 20716172 - 20716344
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  20716172 gtttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttct 20716271  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20716272 ataaaactttttccaaacaaaagtcaaaagactatactccaaattcttatgttttagttttcttaataagtgt 20716344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 39078149 - 39078320
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||    
T  39078149 gtttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatctt-ct 39078247  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39078248 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 39078320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 170 - 408
Target Start/End: Original strand, 7654553 - 7654781
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngt-ttattctcataaaattaaatgcaaattacat 268  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||         | |||||||||||||||           |||||    
T  7654553 cacattttctttatcctaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttttgttattctcataaaat-----------tacat 7654641  T
Q  269 tcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaact 368  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||       |||||||||||||||||||    
T  7654642 tcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaacacaaaaaact 7654741  T
Q  369 atactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  7654742 atactccaaatttttatgttttagttttcttaataagtgt 7654781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 236 - 404
Target Start/End: Original strand, 55580661 - 55580830
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttca-ttttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  55580661 gtttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatcttcc 55580760  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||| |||       |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  55580761 tatacaactttttccaaagaaaacaaaaaaaactatactccaaattcttatgtttcagttttcttaataa 55580830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 10069689 - 10069861
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||    
T  10069689 gtttattctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctttct 10069788  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||        ||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  10069789 ataaaacttttttcgaagaaaatacaaaaaactatactacaaattcttatgttttagttttattaataagtgt 10069861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 17794701 - 17794529
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||| |||| |||||||||||||||||||||||||||||    
T  17794701 gtttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcct 17794602  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||        ||||||||| |||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  17794601 ataaaatttatttcaaagaaaacgcaaaaaactatacttcaaattctttttttttagttttcttaataagtgt 17794529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 260 - 405
Target Start/End: Complemental strand, 16604982 - 16604837
Alignment:
Q  260 aaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaaca 359  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||       ||||||||||    
T  16604982 aaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaaca 16604883  T
Q  360 caaaaaactatactccaaattcttatgttttagttttcttaataag 405  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  16604882 caaaaaactatactctaaattcttatgttttagttttcttaataag 16604837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 5483438 - 5483266
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| | |||||||||||||||||||||||||||||    
T  5483438 gtttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcct 5483339  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    || ||||       ||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||||    
T  5483338 attaaacttattttaaagaaaacacaaaaaattatacttcaaatttttatgttttagttttcttaacaagtgt 5483266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 35310902 - 35310734
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| |     
T  35310902 gtttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttcc 35310803  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    || ||||       ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  35310802 atgaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgttttagttttcttaataa 35310734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 244 - 404
Target Start/End: Original strand, 24940365 - 24940525
Alignment:
Q  244 tcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacn 343  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||  |||| ||||||||||||||||||||| ||||||||     
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaact 24940464  T
Q  344 nnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
          |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  24940465 ttttccaaagaaaatacaaaaaactatactccaaattcttacgttttagttttcttaataa 24940525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 42915523 - 42915694
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca-ttttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||||||||| | |    
T  42915523 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttcca 42915622  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    | ||||       ||||||||||||||||||||| || ||||||||||| |||||||||| |||||||||||    
T  42915623 tgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatattttagtttttttaataagtgt 42915694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 48793784 - 48793618
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||    
T  48793784 ttattctcatgaaattaaatgcaaattacatttaattttctct--cttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccat 48793687  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       |||||||||||  |||||||| || |||||||||||| |||||||||||||||||||||    
T  48793686 gaaacttattccaaagaaaacac--aaaactatgctacaaattcttatgctttagttttcttaataagtgt 48793618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 8683462 - 8683294
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||  |||| |||||||||||||||||| ||||||||||||| ||||||||| || | ||    
T  8683462 ttattctcatgaaattaaatacaaattacatttaattttctct--cttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 8683365  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||||||||||||||||||||| || |||||||||||| ||||||||| |||||||||||    
T  8683364 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagtttttttaataagtgt 8683294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 1585507 - 1585337
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||| |||| |||||| ||||||||||| ||||||| |     
T  1585507 gtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttcc 1585408  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    || ||||       |||||||||||  |||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  1585407 atgaaacttatttcaaagaaaacac--aaaattatactccaaaatcttatgttttacttttcttaacaagtgt 1585337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 35529664 - 35529760
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  35529664 gtttatgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctt 35529760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 50080609 - 50080444
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||| ||| ||||||||||||||||||||||||||||| || |||| |||||| ||||||| |||| |||||| ||||||| ||||| || |||| ||    
T  50080609 ttattcgcatgaaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattggttttatattttcccat 50080510  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      |         ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  50080509 tta-----tacaaaagaaaacacaaaaaattatactcaaaattcttatgttttagttttcttaataagtgt 50080444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 52535745 - 52535654
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttac 327  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||| ||||||||||||| |||||||    
T  52535745 gtttattctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattatttttac 52535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 12002793 - 12002621
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    ||||| |||| ||||||||||||||||||||||||| |      |||| || ||| ||||||||||||||||||| ||||||||||||||||||| | ||    
T  12002793 ttattttcatgaaattaaatgcaaattacattcaatatc-----tcttccagtttctccataaccaatggccaataaaaattgtttttacatctttccat 12002699  T
Q  338 aaaacnnnnnnnaaagaaaa-------cacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12002698 gaaactaattccaaaaaaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 12002621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 410
Target Start/End: Original strand, 16473828 - 16473914
Alignment:
Q  324 ttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16473828 ttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatattttagttttcttaataagtgtaa 16473914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 5064803 - 5064643
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   | |||||||||||||||||||||||||| ||||||         
T  5064803 aaaattaaatgcaaagtgcattcaatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatt 5064704  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| ||||||||||| |||  | ||||||  ||||||||||||||||||||||||||    
T  5064703 tcaaagataacacaaaaaattatgttacaaattactatgttttagttttcttaataagtgt 5064643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 408
Target Start/End: Original strand, 32203226 - 32203377
Alignment:
Q  250 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnn 349  Q
    ||||||||| || |||||||||||||||||| | ||||||||||| |||||||||||       ||||||||||||| ||||||| |||||||           
T  32203226 aattaaatgtaatttacattcaattttctctatgtttcatttttttcataaccaatg-------aaaattgtttttatatcttcccataaaacttatttc 32203318  T
Q  350 aaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||  |||||||||||||||  ||||||||||||||||||||| ||||| |||||    
T  32203319 aaagaaacaacaaaaaactatactttaaattcttatgttttagtttttttaattagtgt 32203377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 249 - 408
Target Start/End: Original strand, 19351851 - 19352016
Alignment:
Q  249 aaattaaatgcaaattacattcaa-ttttctctttctttcattttttccataaccaatggccaatgaaaattgttttt-acatcttcctataaaacnnnn 346  Q
    |||||||||||||||||||||||| |||||||| | || |||| ||| |||||| ||| ||||||||||||||||||| ||||||||| || ||||        
T  19351851 aaattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattgtttttaacatcttcccatgaaacttat 19351950  T
Q  347 nnnaaagaaaacac---aaaaaactatactccaa-attcttatgttttagttttcttaataagtgt 408  Q
       || ||||||||   |||||||||||||||||  || |||||||||||||||||||||||||||    
T  19351951 ttcaatgaaaacacacaaaaaaactatactccaatttttttatgttttagttttcttaataagtgt 19352016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 238 - 401
Target Start/End: Complemental strand, 32323419 - 32323257
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    ||||| |||| |||||||||| ||||||| ||||||||||||| |||| |||||| || |||| |||  | |||||||||||||||||||||||||| ||    
T  32323419 ttattatcatgaaattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcccat 32323321  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaa 401  Q
    ||| |       |||||||||||||||||| ||||| |||||| |||  ||||| |||||||||    
T  32323320 aaatcttattttaaagaaaacacaaaaaacaatacttcaaatttttaaattttaattttcttaa 32323257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 249 - 373
Target Start/End: Original strand, 5815474 - 5815598
Alignment:
Q  249 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnn 348  Q
    ||||||||||  |||||||||||||||||||| |||| | |||||||||||| |||| | |||| |||||| |||||||||||||  |||||||          
T  5815474 aaattaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaacttattt 5815573  T
Q  349 naaagaaaacacaaaaaactatact 373  Q
     ||||||||||||||||||||||||    
T  5815574 caaagaaaacacaaaaaactatact 5815598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 21722769 - 21722670
Alignment:
Q  309 caatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||| ||||||||||||||||||||||       |||||||||| |||| ||||||||  ||||||||||||||||||||| |||||||||||    
T  21722769 caatgaaaattatttttacatcttcctataaaacttattacaaagaaaacataaaacactatacttaaaattcttatgttttagttttattaataagtgt 21722670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 25297380 - 25297286
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
    |||||||||| |||||||||| ||||||||||||||||||  | ||||  ||||| ||||||| |||| ||||||||||||||||||||||||||    
T  25297380 ttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctt 25297286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 402
Target Start/End: Complemental strand, 46070668 - 46070517
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| ||||  |||||||||| || ||||||||   |||||||||||||||||||||||||||||||||||         
T  46070668 aaaattaaatgcaaagtgcattcaatttactct--ctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 46070571  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaat 402  Q
      ||||| ||||| |||||||||  | |||| |  ||||||||||||||||||||    
T  46070570 tcaaagacaacac-aaaaactatgttacaaactactatgttttagttttcttaat 46070517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 248 - 341
Target Start/End: Complemental strand, 5841927 - 5841834
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaa 341  Q
    |||||| |||||||| | || ||||||| |||| |||||||||||||| |||||||||  |||||||||||| |||||||||||||||||||||    
T  5841927 aaaattcaatgcaaagtgcaatcaatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaa 5841834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 8178387 - 8178293
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||  |||||  ||||||||||||||||||| ||||||||    
T  8178387 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaac 8178293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 14583723 - 14583889
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||||||||||||||||||| || || |||| |||||| |   ||| | || ||||||||||| |||||||||||||||| ||    
T  14583723 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcccat 14583821  T
Q  338 aaaacnnnnnnnaaag-aaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
     ||||       |||| |||||||||| |||||||    |||||||||| ||||||||||||||||||    
T  14583822 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataa 14583889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 23978263 - 23978169
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||||    
T  23978263 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 241 - 341
Target Start/End: Complemental strand, 17186940 - 17186850
Alignment:
Q  241 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaa 340  Q
    ||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
T  17186940 ttctcataaaattaaatgcaaatta-attcaat---------ctttcattttttccataaccaatagccaatgaaacttatttttacatcttcctataaa 17186851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 248 - 397
Target Start/End: Complemental strand, 47516339 - 47516190
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    |||||||||| |||| | ||||  |||| |||| ||||||||||| || ||||||||   |||||||||||||||||||| ||||||||||||||         
T  47516339 aaaattaaatacaaagtgcatttgatttgctctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatt 47516240  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttc 397  Q
      ||||| |||||||||||||||| | |||| |  ||||||||| |||||    
T  47516239 tcaaagataacacaaaaaactatattacaaactactatgttttacttttc 47516190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 342
Target Start/End: Original strand, 50145731 - 50145834
Alignment:
Q  239 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctata 338  Q
    |||| |||| ||||||||||  ||||||||| ||||||| || |||| |||||| ||||| | |||| ||||||||||||||| |||||||||||| |||    
T  50145731 tattttcatgaaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcccata 50145830  T
Q  339 aaac 342  Q
    ||||    
T  50145831 aaac 50145834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 17187074 - 17186992
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||| |||||||||||        | |||||||||||||||||||||||||||||||||| |||||||||||    
T  17187074 atactccctccgtcctataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 17186992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 404
Target Start/End: Complemental strand, 17799277 - 17799126
Alignment:
Q  253 taaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaa 352  Q
    |||||||||||| |||| |||||  |||  || ||||||| |||||||| |||  ||||||||||||||||||||||||||| |||||||       ||     
T  17799277 taaatgcaaattgcatttaatttgttctccctctcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaactaattccaag 17799178  T
Q  353 gaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
     | ||||| | ||| ||||||||||||| | || ||||||||||||||||||    
T  17799177 aagaacaccagaaattatactccaaattatcatattttagttttcttaataa 17799126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 16605127 - 16605046
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| |||||||||||||||||        | |||||||||||||||||||||||||||||||||| ||||||||||    
T  16605127 atactcccttcgtcccataatataagctaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 16605046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 35529531 - 35529612
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||| |||||||        | |||||||||||||||||||||||||||||||||| ||||||||||    
T  35529531 atactccctccgtcccatagtataagcaaaaaaaacgcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 35529612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 28142769 - 28142610
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    |||||||||||||||   |||| ||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||| |||||||||||         
T  28142769 aaaattaaatgcaaaag-catttaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcctcctataaaacttatt 28142671  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| ||||||||||| |||  | |||| | | || ||||||||||||||||||||||    
T  28142670 ttaaagataacacaaaaaattatgttacaaactatcatattttagttttcttaataagtgt 28142610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 410
Target Start/End: Complemental strand, 52535630 - 52535583
Alignment:
Q  363 aaaactatactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  52535630 aaaactatactccaaattcttatgctttagttttcttaataagtgtaa 52535583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 30012163 - 30012117
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  30012163 cacattttctttgtcccaaaatataagcaaaaaagatcaacttttat 30012117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 39078017 - 39078099
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||| |||||||||        | ||||||||||||||||||||||||| |||||||| |||||||||||    
T  39078017 atactccctccgtcccacaatataagcaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttatc 39078099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 7438760 - 7438808
Alignment:
Q  356 aacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  7438760 aacaccaaaaactatactccaaattattatgttttagttttcttaataa 7438808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 32410332 - 32410492
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| |  ||||||||| |||| | ||| ||||| || ||||  ||    ||||||||||| ||||||||||||||||||||||         
T  32410332 aaaattaaatgcaaagtgtattcaatttgctctcttttttattttctctataattaactagcaatgaaaattatttttacatcttcctataaaacttatt 32410431  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| ||||||||||||| || |  ||| |  |||||| |||||||||||||||||||    
T  32410432 tcaaagataacacaaaaaactttattataaactactatgttgtagttttcttaataagtgt 32410492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 37911888 - 37912048
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||| ||||| |||| | ||| ||||| || |||| |||   |||||||||||||||||||||| || |||||||||         
T  37911888 aaaattaaatgcaaagtgcattgaatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaacttatt 37911987  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| |||||||||||||||  |  ||| |  | | ||||||||||||||||||||||    
T  37911988 ttaaagataacacaaaaaactatgttataaactactgtattttagttttcttaataagtgt 37912048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 42915427 - 42915470
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  42915427 attttctttgtcccaaaatataagcaaaaaagacaaacttttat 42915470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 55580564 - 55580607
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaactttta 215  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  55580564 cattttctttgtcccaaaatataagcaaaaaagacaaactttta 55580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 49080261 - 49080355
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | ||||||||||  ||| | |||||||||  |  ||| |||   |||||||||||||||||||||||||||||||||||    
T  49080261 aaaattaaatgcaaagtgcattcaatttgatctctttttcattttccctgtaatcaactaccaatgaaaattgtttttacatcttcctataaaac 49080355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 384
Target Start/End: Original strand, 31280191 - 31280329
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||| || ||||||||| |||| | ||||||||||||||  |||| || ||| ||||||| |||| ||||||||||||| ||||||||      |    
T  31280191 gtttattctaatgaaattaaatacaaactgcattcaattttctc--tcttcca-tttctccataa-caatagccaatgaaaattatttttaca------t 31280280  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattctta 384  Q
    |||||||       ||||||||||||||||||||||||| |||||||||    
T  31280281 ataaaacttattccaaagaaaacacaaaaaactatactctaaattctta 31280329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 390
Target Start/End: Complemental strand, 32280111 - 32280009
Alignment:
Q  288 attttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgt 387  Q
    ||||| ||||||| |||| |||||| |||||||||||||||| |    || ||||       ||||||||||||||||| ||||||||||||||||||||    
T  32280111 attttctccataatcaatagccaattaaaattgtttttacatatcttcatcaaacctattctaaagaaaacacaaaaaattatactccaaattcttatgt 32280012  T
Q  388 ttt 390  Q
    |||    
T  32280011 ttt 32280009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 342
Target Start/End: Original strand, 40553774 - 40553867
Alignment:
Q  249 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||||||||||||||| |||||| ||| ||||   ||||| ||| |||||||| |||  ||||||||| ||||||||||||||| |||| ||||    
T  40553774 aaattaaatgcaaattgcattcattttactctccttttcactttctccataactaataaccaatgaaacttgtttttacatctttctatgaaac 40553867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 340
Target Start/End: Complemental strand, 28318565 - 28318473
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaa 340  Q
    ||||||||||| ||| | |||||||||| ||   | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||    
T  28318565 aaaattaaatgtaaaatgcattcaatttactagctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaa 28318473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 29511490 - 29511551
Alignment:
Q  309 caatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactat 370  Q
    ||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||    
T  29511490 caatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactat 29511551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 32012535 - 32012491
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  32012535 cattttctttgtctcaaaatataagcaaaaaagacaaacttttat 32012491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 48793881 - 48793837
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  48793881 cattttctttgtcccaaaatataagcataaaagacaaacttttat 48793837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 404
Target Start/End: Complemental strand, 8013237 - 8013081
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    |||||||||||||| || |||||| | |  ||| ||||||||||| || || || |||  ||||| ||||||||||||||||||| |||| ||||         
T  8013237 aaaattaaatgcaatttgcattcattatgttctctctttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatt 8013138  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
      || || ||||||| |||||||  | |||| |  ||||||||||||||||||||||    
T  8013137 tcaaggataacacaagaaactatgttacaaactactatgttttagttttcttaataa 8013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 31532496 - 31532445
Alignment:
Q  353 gaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||| |||||||||||||| ||||| | |||||||||||||||||||||    
T  31532496 gaaaacataaaaaactatactctaaattgtaatgttttagttttcttaataa 31532445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 342
Target Start/End: Original strand, 40411104 - 40411199
Alignment:
Q  247 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||||||||||| ||| | ||||||||||  ||| | ||||||||| ||  ||| |||   ||||| |||||||||||||||||||||||||||||    
T  40411104 taaaattaaatgtaaactgcattcaatttgatctctttttcattttctctgtaatcaactaccaataaaaattgtttttacatcttcctataaaac 40411199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 4058614 - 4058656
Alignment:
Q  175 tttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  4058614 tttctttgtcctaaaatataagcaaaaaagacaaacttttatc 4058656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 10069600 - 10069638
Alignment:
Q  179 tttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  10069600 tttgtcccaaaatataagcaaaaaagaaaaacttttatc 10069638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 47516429 - 47516383
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||    
T  47516429 cacattttctttgtcccaaattataagcaaaaaagaccaacttttat 47516383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 29203414 - 29203451
Alignment:
Q  182 gtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    |||||||||||||||||||||||| |||||||||||||    
T  29203414 gtcccaaaatataagcaaaaaagacaaacttttatctt 29203451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 32280145 - 32280104
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctc 279  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  32280145 ttattctcatgaaactaaatgcaaattacattcaattttctc 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 52535842 - 52535805
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaa 209  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  52535842 cattttcattgtcccaaaatataagcaaaaaagataaa 52535805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 53848471 - 53848624
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    |||| |||||||||| | |||||||||| || | |||||||||||||| ||||       ||||| |||||||||||||| |||||||||||||          
T  53848471 aaaaataaatgcaaagtgcattcaatttgctttctctttcattttttcaataa-------ccaattaaaattgtttttacgtcttcctataaaaattatt 53848563  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      || || ||||||| |||||||  | |||| |  |||||||| |||||||||||||||||    
T  53848564 tcaaggataacacaagaaactatgttgcaaactactatgtttttgttttcttaataagtgt 53848624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 29180616 - 29180576
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  29180616 ttctttgtctcaaaatataagcaaaaaagacaaacttttat 29180576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 35310998 - 35310954
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||  ||||||||||||||||||| ||||||||||    
T  35310998 cattttctttgtcttaaaatataagcaaaaaagacaaacttttat 35310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 38140752 - 38140700
Alignment:
Q  356 aacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||| ||||||||||| ||||| | ||| |||||||||||||||||||||    
T  38140752 aacacaagaaactatactcaaaattatcatgctttagttttcttaataagtgt 38140700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 49080172 - 49080216
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||    
T  49080172 attttctctgtcccaaattataagcaaaaaagatcaacttttatc 49080216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 50768357 - 50768401
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||    
T  50768357 cattttctttgtctcaaaatataagcaaaaaagaccaacttttat 50768401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 21722826 - 21722783
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctc 279  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||    
T  21722826 gtttattctcatgaaattaaatacaaattacatttaattttctc 21722783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 332
Target Start/End: Complemental strand, 30012074 - 30011991
Alignment:
Q  247 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
    |||||||||||||||||| ||||||||||  ||||  ||| ||||| |||||||  | |  ||||||| |||||||||||||||||    
T  30012074 taaaattaaatgcaaattgcattcaatttgttctt--ttttattttctccataataattaaccaatgataattgtttttacatctt 30011991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 406
Target Start/End: Original strand, 40411762 - 40411812
Alignment:
Q  356 aacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 406  Q
    |||||||||||||||| | |||| |  ||||||||||||||||||||||||    
T  40411762 aacacaaaaaactatattacaaactactatgttttagttttcttaataagt 40411812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 8013325 - 8013280
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||| ||||||||  ||||||||||    
T  8013325 cattttctttgtcccaaattataagtaaaaaagaccaacttttatc 8013280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 12002887 - 12002846
Alignment:
Q  175 tttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  12002887 tttctttgtccctaaatgtaagcaaaaaagacaaacttttat 12002846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 3043371 - 3043331
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| |||||||||||| |||||||| |||||||||    
T  3043371 ttctttgtctcaaaatataagcgaaaaagatcaacttttat 3043331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 5222506 - 5222462
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||| |||||||||| ||||||||  |||||||||    
T  5222506 cattttctttgtcctaaaatataagtaaaaaagaccaacttttat 5222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 38187934 - 38187890
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||| || ||||||||||| ||||||||| |||||||||    
T  38187934 cattttctttatctcaaaatataagtaaaaaagatcaacttttat 38187890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 38940781 - 38940825
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| |||||||||||||||||| |  |||||||||    
T  38940781 cattttctttgtctcaaaatataagcaaaaaataccaacttttat 38940825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 47806814 - 47806854
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||| || ||||||    
T  47806814 ttctttgtctcaaaatataagcaaaaaagatcaatttttat 47806854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 55937911 - 55937867
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||  |||||||||||||||||||  |||||||||    
T  55937911 cattttctttgtcttaaaatataagcaaaaaagaccaacttttat 55937867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 1e-94; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 135 - 408
Target Start/End: Complemental strand, 6110468 - 6110193
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||           
T  6110468 atactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttt 6110369  T
Q  235 ngtttattctcataaaattaaatgcaaattacattcaattttctctttct--ttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6110368 tgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 6110269  T
Q  333 cctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||        ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6110268 cctataaaactttttccgaagaaaacacaaaaagctatactccaaattcttatgttttagttttcttaataagtgt 6110193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 173 - 408
Target Start/End: Original strand, 45085188 - 45085423
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacattcaa 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||||    
T  45085188 attttctttgtcccaaaatataagcaaaaaagataaacttttatcttttctaagattttttttgtttattctcataaaattaaatgcaaattacattcaa 45085287  T
Q  273 ttttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatac 372  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||    
T  45085288 ttttctctctctttcattttttccataaccaatggctaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaaactatac 45085387  T
Q  373 tccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||||| ||||||||||||||||    
T  45085388 tccaaattcttatgttttaattttcttaataagtgt 45085423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 170 - 410
Target Start/End: Complemental strand, 28599381 - 28599140
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn-gtttattctcataaaattaaatgcaaattacat 268  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||         ||||||||||||||||||||||||| |||||||    
T  28599381 cacattttctttgtcccaaaatataatcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcatattacat 28599282  T
Q  269 tcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaact 368  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |       |||||||||||||||||||    
T  28599281 tcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaatctttttccaaagaaaacacaaaaaact 28599182  T
Q  369 atactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28599181 atactccaaattcttatgttttagttttcttaataagtgtaa 28599140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 136 - 408
Target Start/End: Original strand, 35517016 - 35517289
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        ||||||||||| || ||||||||||||||||||||| ||||||||||||||| |||||            
T  35517016 tactccctccgtcccataatataagcaaaaaaaacacattttcttcgtaccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttt 35517115  T
Q  236 gt-ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
     | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||  |    
T  35517116 ttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctcac 35517215  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35517216 tataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 35517289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 170 - 408
Target Start/End: Original strand, 41528184 - 41528423
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||    
T  41528184 cacattttgtttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacatt 41528283  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  41528284 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaaatttcaaagaaaacacaaaaaacta 41528383  T
Q  370 tactccaaattcttatg-ttttagttttcttaataagtgt 408  Q
    |||| |||||||||||| ||||| ||||||||||||||||    
T  41528384 tacttcaaattcttatgtttttaattttcttaataagtgt 41528423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 136 - 408
Target Start/End: Original strand, 3201229 - 3201492
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        |||||||||||| ||||||||||||||||||||||| ||||| |||||||||                  
T  3201229 tactccctccgtcccataatataagcaaaaaaaacacattttctttatcccaaaatataagcaaaaaagacaaactattatctttt---------ttttt 3201319  T
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  3201320 gtttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttct 3201419  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  3201420 ataaaactttttccaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgt 3201492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 19264093 - 19264266
Alignment:
Q  236 gtttattctcataaaattaaatgcaaa-ttacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  19264093 gtttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcc 19264192  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||       ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  19264193 tataaaactttttccaaagaaaacacaaaaaattatactctaaattcttatgttttagttttcttaataagtgt 19264266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 236 - 404
Target Start/End: Original strand, 45660359 - 45660530
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  45660359 gtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcct 45660458  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaa---attcttatgttttagttttcttaataa 404  Q
    |||||||       ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  45660459 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttttcttaataa 45660530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 33198797 - 33198625
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||    
T  33198797 gtttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcct 33198698  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  33198697 ataaaacttcttttaaagaaaacacaaaaaactagagtccaaattcttatattttagttttcttaataagtgt 33198625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 11617020 - 11617190
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| ||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  11617020 ttattttcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctat 11617119  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||       |||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11617120 aaaacttttttcaaagaaaataccaaaaactatactccaaattcttatgttttaattttcttaataagtgt 11617190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 12938236 - 12938408
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| |||||||||||||||||||||||  ||| ||| ||||| ||||| ||||||| |||| ||||||||||||||||||||||  |||||    
T  12938236 gtttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcct 12938335  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12938336 ataaaacttatttcaaagaaagcacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 12938408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 29524205 - 29524035
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  29524205 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccat 29524106  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||||||||||||||||| ||| || |||||||||||| |||||||||| ||||||||||    
T  29524105 gaaacttattccaaagaaaacacaaaaaattatgctacaaattcttatgctttagttttcataataagtgt 29524035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 28858303 - 28858478
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||| |||||||||||| ||    
T  28858303 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttct 28858402  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaacta---tactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||||||   || |  |||||||||||||||||||||||||||| ||||    
T  28858403 ataaaacttttttcaaagaaaacacaaaaaactactatattttaaattcttatgttttagttttcttaatatgtgt 28858478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 25572042 - 25572211
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||  ||||||||||||||||||||||||||| ||    
T  25572042 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttt-ccataaccaatatccaatgaaaattgtttttacatcttcccat 25572140  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  25572141 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgt 25572211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 9864881 - 9864712
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||||||||||||||||||||| |||  ||| |||||| ||||||| |||| ||||||||||||||||||||| |||||| ||    
T  9864881 ttattctcatgaaattaaatgcaaattacattcaattttatct--cttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccat 9864784  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaa-ctatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9864783 gaaacttattccaaagaaaacacaaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 9864712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 6766100 - 6765927
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttca-ttttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||| | |||| |||||||||||||||||||||    
T  6766100 gtttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatcttcc 6766001  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||        || ||||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  6766000 tataaaatttattccaatgaaaacataaaaaactatacttcaaatttttatgttttaattttcttaataagtgt 6765927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 241 - 405
Target Start/End: Original strand, 8701601 - 8701765
Alignment:
Q  241 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaa 340  Q
    ||||||| ||||||||| |||||| |||| |||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||| || ||    
T  8701601 ttctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaa 8701700  T
Q  341 acnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataag 405  Q
    ||       |||||||||| |||||||||| || |||||| ||||||||||||||||||||||||    
T  8701701 acttattccaaagaaaacataaaaaactatgctacaaatttttatgttttagttttcttaataag 8701765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 236 - 384
Target Start/End: Original strand, 14873956 - 14874105
Alignment:
Q  236 gtttattctcataaaattaaa-tgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    ||||||||||||| ||||||| ||||||||||||| |||||| ||| ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  14873956 gtttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttcc 14874055  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattctta 384  Q
    ||||||||       ||||||||||||||||||||||||||||| |||||    
T  14874056 tataaaacttttttcaaagaaaacacaaaaaactatactccaaactctta 14874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 24204695 - 24204527
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| | |||||||| |||||| |||||||||||||| |||| |||||| | |||||||||| |||||||||||||| |||||||| |||||    
T  24204695 gtttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcct 24204596  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||       ||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||    
T  24204595 ataaaacttattccaaagaaaacacaataaattatactccaaattcttaggttttagttttcttgataa 24204527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 405
Target Start/End: Original strand, 33677477 - 33677646
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| ||||||||||| ||| |||||||||||||| | ||||  ||||| |||||||||||| | |||||||||||||||||||||||||||    
T  33677477 gtttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatcttcct 33677576  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataag 405  Q
    |||||||       ||| |||||| |||||||||| || |||||| |||||||||||||||| |||||||    
T  33677577 ataaaacttagtaaaaaaaaaacataaaaaactattcttcaaatttttatgttttagttttcgtaataag 33677646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 7645396 - 7645221
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttcttt---cattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |  ||   |||||| |||||||  ||| ||||||||||||||||||||||| ||    
T  7645396 gtttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattgtttttacatgtt 7645297  T
Q  333 cctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    || || |||        || |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7645296 cccatgaaatttattctaaggaaaacacaaaatattatactccaaattcttatgttttagttttcttaataagtgt 7645221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 237 - 404
Target Start/End: Original strand, 5963196 - 5963362
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    |||||||| || | |||||||||||||||||||||||||||||| |||| |||||| | |||||||||| |||||| |||||| |||||||||| ||| |    
T  5963196 tttattcttatgacattaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatc-tccca 5963294  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||       ||||||||||||||||| || |||| |||||||||| ||||||||||||||||||    
T  5963295 taaaacttattctaaagaaaacacaaaaaattagactctaaattcttatattttagttttcttaataa 5963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 263 - 408
Target Start/End: Complemental strand, 35115943 - 35115797
Alignment:
Q  263 ttacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaa-caca 361  Q
    ||||||||||||||| || |||| |||||| ||||||||||||  | ||||||||||||||||||||||| |||||||||       ||| |||| ||||    
T  35115943 ttacattcaattttcactctcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaacttattaaaaaaaaaaacaca 35115844  T
Q  362 aaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  35115843 aaaaactatactccaaattcttatgttttagttctcttaataagtgt 35115797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 35022897 - 35023064
Alignment:
Q  242 tctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatg--gccaatgaaaattgtttttacatcttcctataa 339  Q
    |||||| ||||||||||||||||  |||||||||||||| |||  |||||| ||| ||| ||||   || |||||||||||||||||||||||||||| |    
T  35022897 tctcattaaattaaatgcaaattgtattcaattttctctctctaccattttctccttaaacaatatagcaaatgaaaattgtttttacatcttcctatga 35022996  T
Q  340 aacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||       ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35022997 aacttactccaaa-aaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgt 35023064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 236 - 364
Target Start/End: Complemental strand, 40584564 - 40584436
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||   |||||||||||||||||||||||||||     
T  40584564 gtttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttccc 40584465  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaa 364  Q
    |||||||       |||||||||||||||    
T  40584464 ataaaacttattctaaagaaaacacaaaa 40584436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 266 - 408
Target Start/End: Complemental strand, 40808853 - 40808714
Alignment:
Q  266 cattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaa 365  Q
    |||| ||||||||||  |||| ||||||||| |||||||| || ||||||||||||||||||||||||| || ||||       ||||||||||||||||    
T  40808853 catttaattttctct--cttttattttttccctaaccaattgctaatgaaaattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaa 40808757  T
Q  366 actatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||| || |||||||||||| |||||||||||||||||||||    
T  40808756 actatgctacaaattcttatgctttagttttcttaataagtgt 40808714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 44454987 - 44455151
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||||||||||  || |||| |||||| || |||| |||| |||||||||  || ||||||| | |||| ||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaatgaa--ttttttttacgttttcccat 44455084  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
     ||||       ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  44455085 gaaacttattcaaaataaaacacaaaaaactatactccaaattcatatattttagttttcttaataa 44455151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 238 - 410
Target Start/End: Complemental strand, 30830760 - 30830588
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||||||||||||| ||||||||||| | ||||||||| || |||| ||||  ||||||||| || |||||| ||||||  ||    
T  30830760 ttattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcat 30830661  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
     ||||       ||| ||||||||||||   ||||||||| ||||||||||||| |||||||||||| |||||    
T  30830660 gaaacttatttcaaaaaaaacacaaaaagacatactccaatttcttatgttttaattttcttaataaatgtaa 30830588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 43415468 - 43415567
Alignment:
Q  309 caatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttagtaagtgt 43415567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 404
Target Start/End: Original strand, 26998323 - 26998479
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||||         
T  26998323 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 26998422  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
      ||||| |||||||||||||||  | |||| |   |||||||||||||||||||||    
T  26998423 ttaaagataacacaaaaaactatcttacaaactaccatgttttagttttcttaataa 26998479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 32010108 - 32010268
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||| ||||| |||| | ||||||||| || |||| |||   |||||||||||| ||||||||||||||||||||||         
T  32010108 aaaattaaatgcaaagtgcatttaatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 32010207  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| |||||||||||||||| | |||| |  ||||| ||||||||||||||||||||    
T  32010208 tcaaagataacacaaaaaactatattacaaactactatgtattagttttcttaataagtgt 32010268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 409
Target Start/End: Original strand, 32273677 - 32273842
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||| |||||||||||||||         
T  32273677 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaacttatt 32273776  T
Q  348 nnaaagaaaacacaaaaaactatactccaaatt--ct--tatgttttagttttcttaataagtgta 409  Q
      ||||| |||||||||||||||  | ||||||  ||  |||||||||||||||||||||||||||    
T  32273777 tcaaagataacacaaaaaactatgttacaaattgactactatgttttagttttcttaataagtgta 32273842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 30421348 - 30421242
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||  | ||  |||   | || |||||||||||||||||||| |    
T  30421348 gtttattcttataaaattaaatgtaaattacatttaattttctctttctttcatttttttaaaaattaataatcgataaaaattgtttttacatcttctt 30421249  T
Q  336 ataaaac 342  Q
    |||||||    
T  30421248 ataaaac 30421242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 19263961 - 19264045
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    ||||||||||| |||||||||||||||        | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  19263961 atactccctccatcccataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 19264045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 39696965 - 39696877
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttt 324  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||||| |||||| || || | |||| || |||||||||||||||    
T  39696965 gtttattctcacgaaattaaatgcaaattacatttaattttctctttcttccattttctctatgatcaatagctaatgaaaattgtttt 39696877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 404
Target Start/End: Original strand, 38071002 - 38071157
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||| ||||||         
T  38071002 aaaattaaatgtaaagtgcattcaatttgctctat-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctgtaaaacttatt 38071100  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
      ||||| |||||||||||||||  | |||| |   |||||||||||||||||||||    
T  38071101 tcaaagataacacaaaaaactatgttacaaactaccatgttttagttttcttaataa 38071157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 18834190 - 18834109
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||| ||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  18834190 atacttcctccgtcccatattataagcaaaaaaatcacattttctttgtcccaaaatataagcaaaaaagatcaacttttat 18834109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 9709526 - 9709613
Alignment:
Q  255 aatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||||||||| ||||||||||  ||| ||||||||||| || |||| ||||  | ||||||||||||||| |||||||||||||||||    
T  9709526 aatgcaaattgcattcaatttgttctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaac 9709613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 5280642 - 5280592
Alignment:
Q  267 attcaattttctctttctttcattttttccataaccaatggccaatgaaaa 317  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  5280642 attcaattttctctctctttcattttttccataaccaatagccaatgaaaa 5280592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 404
Target Start/End: Original strand, 4707419 - 4707580
Alignment:
Q  240 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataa 339  Q
    |||||| |||||||||||| ||||| |||||||| | ||| | || || ||||||| || |  |||  ||||||||||||||||| |||||||||  | |    
T  4707419 attctcgtaaaattaaatgtaaattgcattcaatgtgctcctcctctccttttttctatgatgaataaccaatgaaaattgttttaacatcttcccgtta 4707518  T
Q  340 aacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||       || ||||||||||||||||||||||||||   | |||||||||| ||||||||||    
T  4707519 aacttattctaaggaaaacacaaaaaactatactccaaa---tcatgttttagtgttcttaataa 4707580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 33198932 - 33198851
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||| |||||||||||||||||||||        | |||||||||||||||||||||||||||||||||| ||| |||||||    
T  33198932 tacttcctccgtcccataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaaattttatc 33198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 8032823 - 8032728
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttc-tttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||||||| |||| || ||||||||| || ||||| |    ||||| |||||||||||||||||||||||||||||    
T  8032823 aaaattaaatgcaaaatgcattcaatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctataaaac 8032728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 28858175 - 28858253
Alignment:
Q  139 tccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||        | |||||||||||||| ||||||||||||||||| | |||||||||||    
T  28858175 tccctccgtcccataatataagcaaaaataactcattttctttgtcctaaaatataagcaaaaaatacaaacttttatc 28858253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 38070914 - 38070959
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||    
T  38070914 cattttctttgtcccaaattataagcaaaaaagacaaacttttatc 38070959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 44442137 - 44442230
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaa 341  Q
    ||||||||||||||| | |||||||||| || | | ||||||||| || |||| |||    ||||||||||||||||||||||||| |||||||    
T  44442137 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactatcaatgaaaattgtttttacatcttcatataaaa 44442230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 45660261 - 45660306
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||||||| | |||||||||||    
T  45660261 cattttctttgtcccaaaatataagcaaaaaaaacaaacttttatc 45660306  T

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Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 404
Target Start/End: Complemental strand, 4891793 - 4891636
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||| ||| | |||||||| | |||| | ||||||||| |  |||| |||   ||||| |||||||||||||||||||||||||||||         
T  4891793 aaaattaaatgtaaagtgcattcaatctgctctctttttcattttctttataatcaactaccaataaaaattgtttttacatcttcctataaaacttatt 4891694  T
Q  348 nnaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
      ||||| ||||| ||||||||||  | |||| |  ||| ||||||||||||||||||    
T  4891693 tcaaagataacacaaaaaaactatgttacaaactactatattttagttttcttaataa 4891636  T

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Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 5280741 - 5280697
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||    
T  5280741 attttctttgtcccaaaatataagcaaaaaagacaaatttttatc 5280697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 18454964 - 18455008
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  18454964 cattttctttgtcctaaaatataagcaaaaaagataaatttttat 18455008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 25571943 - 25571987
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||||||||||||||||||||| | ||||||||||    
T  25571943 cattttctttgtcccaaaatataagcaaaaaaaacaaacttttat 25571987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 29524302 - 29524258
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  29524302 cattttctttgtcccaaaatataagtaaaaaagacaaacttttat 29524258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 38549884 - 38549840
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  38549884 cattttctttgtctcaaaatataagcaaaaaagatcaacttttat 38549840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 40808973 - 40808930
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||    
T  40808973 attttctttgtcccaaaatataagcaaaaaagacaaatttttat 40808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 5280582 - 5280536
Alignment:
Q  351 aagaaaacacaaaaaa-ctatactccaaattcttatgttttagtttt 396  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  5280582 aagaaaacacaaaaaaactatagtccaaattcttatgttttagtttt 5280536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 11616925 - 11616967
Alignment:
Q  175 tttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  11616925 tttctttgtcctaaaatataagtaaaaaagataaacttttatc 11616967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 404
Target Start/End: Original strand, 32428098 - 32428136
Alignment:
Q  366 actatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  32428098 actatactccaaattcttatgttttagtttttttaataa 32428136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 11031077 - 11031020
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 305  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||    
T  11031077 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaat 11031020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 16495019 - 16494986
Alignment:
Q  309 caatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||||||||||||||||||||||    
T  16495019 caatgaaaattgtttttacatcttcctataaaac 16494986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 370
Target Start/End: Original strand, 20380129 - 20380251
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| |||   ||||||||  || ||||||||| ||||||||||||         
T  20380129 aaaattaaatgcaaagtgcattcaatttgctctcgttttcattttctctataatcaactaccaatgaattttttttttacattttcctataaaacttatt 20380228  T
Q  348 nnaaagaaaacacaaaaaactat 370  Q
      ||||| |||||||||||||||    
T  20380229 tcaaagataacacaaaaaactat 20380251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 21539635 - 21539716
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||| | |||||||||        | ||||||||||||| ||||||||||||||||||||  |||||||||    
T  21539635 atactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 21539716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 408
Target Start/End: Complemental strand, 11825385 - 11825353
Alignment:
Q  376 aaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||||||||||||||||||||||||    
T  11825385 aaattcttatgttttagttttcttaataagtgt 11825353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 15068661 - 15068705
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||    
T  15068661 cattttctttgtctcaaaatataagcaaaaaagatcaatttttat 15068705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 33635251 - 33635295
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||    
T  33635251 cattttctttgtctcaaaatataagcaaaaaagaccaacttttat 33635295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 792636 - 792553
Alignment:
Q  133 acatactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||| | |||||||||        | ||| ||||||||| ||||||||||||||||||||  |||||||||    
T  792636 acatactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 792553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 4033915 - 4033872
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||| ||||||||||||||||||||| || ||||||    
T  4033915 attttctttgtctcaaaatataagcaaaaaagatcaatttttat 4033872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 14873859 - 14873890
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaa 203  Q
    ||||||||||||||||||||||||||||||||    
T  14873859 cattttctttgtcccaaaatataagcaaaaaa 14873890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 26998235 - 26998280
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||| ||| |||||||||||||||  ||||||||||    
T  26998235 cattttctttgtcctaaattataagcaaaaaagaccaacttttatc 26998280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 32010020 - 32010065
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||| ||||| |||||| ||||||||| ||||||||||    
T  32010020 cattttctttgttccaaattataagtaaaaaagatcaacttttatc 32010065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 408
Target Start/End: Complemental strand, 33932966 - 33932917
Alignment:
Q  359 acaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||| |||||| |||| |  ||||||||||||||||||||||||||    
T  33932966 acaaaaaattatactacaaaatactatgttttagttttcttaataagtgt 33932917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 14565611 - 14565571
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  14565611 ttctttgtctcaaaatataagcaaaaaagactaacttttat 14565571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 29514256 - 29514216
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  29514256 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 29514216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 175; Significance: 5e-94; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 133 - 408
Target Start/End: Original strand, 21542309 - 21542584
Alignment:
Q  133 acatactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnn 232  Q
    |||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |         
T  21542309 acatactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaatattttt 21542408  T
Q  233 nnngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
         |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  21542409 ttttgttattctcataatattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatctt 21542508  T
Q  333 cctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21542509 cctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 21542584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 141 - 408
Target Start/End: Complemental strand, 35129317 - 35129049
Alignment:
Q  141 cctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngttta 240  Q
    |||||||||||||||||||||        ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||          |||    
T  35129317 cctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatacaagcaaaaaagacaaacttttatcttttccaagatttttttttgtta 35129218  T
Q  241 ttctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgttt-ttacatcttcctataa 339  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  35129217 ttctcgtaaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataa 35129118  T
Q  340 aacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35129117 aactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 35129049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 135 - 408
Target Start/End: Complemental strand, 11082513 - 11082240
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    ||||||| |||||||||||||||||||         ||||||||||||| ||||||||||||||||||  | ||||||||||||||| |||||           
T  11082513 atactccatccgtcccataatataagcaaaaaaaatacattttctttgtaccaaaatataagcaaaaac-acaaacttttatctttttcaagattttttt 11082415  T
Q  235 ngt-ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
      | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  11082414 tttgttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctcc 11082315  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11082314 ctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 11082240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 135 - 408
Target Start/End: Complemental strand, 34177909 - 34177636
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    ||||||||||||||||||||||||||         |||||||||||||| |||||||||||| |||||| | |||||||||||||||||||||           
T  34177909 atactccctccgtcccataatataagtaaaaaaaacacattttctttgtaccaaaatataagtaaaaaacacaaacttttatcttttccaagattttttt 34177810  T
Q  235 ngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  34177809 ttgttattctcataaaattaaatgcaaattacattcaattatctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccc 34177710  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||         |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  34177709 tataaatttttttccaaagaaaacacaaaaaactatattccaaattcttatgttttaattttcttaataagtgt 34177636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 170 - 404
Target Start/End: Complemental strand, 3095954 - 3095719
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtt--tattctcataaaattaaatgcaaattaca 267  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||         ||  |||||||||||||||||||||||||||||    
T  3095954 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttttgttattctcataaaattaaatgcaaattaca 3095855  T
Q  268 ttcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaac 367  Q
    ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  3095854 ttcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaac-ttttccaaagaaaacacaaaaaac 3095756  T
Q  368 tatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  3095755 tatactccaaatttttatgctttagttttcttaataa 3095719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 7275040 - 7274870
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  7275040 ttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccat 7274941  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       |||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  7274940 gaaacttattccaaagaaaatacaaaaaactatgctacaaattcttatgttttagttttcttaataagtgt 7274870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 237 - 404
Target Start/End: Complemental strand, 30794358 - 30794191
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||| ||||  ||||| ||||| |||||| ||||||||||| ||||||||||||||||||    
T  30794358 tttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttccta 30794259  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||       ||| |||||| |||||| |||||| ||||||||||| ||||||||||||||||||    
T  30794258 taaaacttattccaaataaaacataaaaaattatacttcaaattcttatattttagttttcttaataa 30794191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 12461596 - 12461428
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| ||||||||| |||||||||||||||||||| | ||||  ||||| |||||||||||| |||||||||||||||||||||||||| ||    
T  12461596 gtttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttct 12461497  T
Q  336 at-aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    || |||||       |||||||| | ||||||||||| |||||||||| |||||||||||||||||||||    
T  12461496 ataaaaacttatttcaaagaaaata-aaaaaactatattccaaattctcatgttttagttttcttaataa 12461428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 17751911 - 17751739
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||| || ||| |||||||||||||||||||||||| ||| |||| |||||| ||||||| |||| ||||||||  | ||||||||||| ||       
T  17751911 gtttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacatttttta 17751812  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    | |||||       |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  17751811 aaaaaacttaatctaaagaaaacacaaaaaactatactccaaattcttatattttaattttcttaataagtgt 17751739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 4031991 - 4032154
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||| |||||||         
T  4031991 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatt 4032090  T
Q  348 nnaaagaaaacacaaaaaactatactccaaa-ttct--tatgttttagttttcttaataagtgt 408  Q
      ||||| |||||||||||||||  | |||| | ||  ||||||||||||||||||||||||||    
T  4032091 tcaaagataacacaaaaaactatgttacaaactactactatgttttagttttcttaataagtgt 4032154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 316
Target Start/End: Original strand, 9428764 - 9428844
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaa 316  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||| ||||| |||||||| ||||||||| ||||||||||    
T  9428764 gtttattctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaatgaaa 9428844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 372
Target Start/End: Original strand, 31107185 - 31107320
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| | |||||||||||||| |||| |||| | |||| |||||  ||||||||| ||| |    
T  31107185 gtttattcttataaaattaaatgcaaattacattcaa-tttctttctctttcattttttctataatcaatagtcaataaaaatcatttttacattttctt 31107283  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatac 372  Q
    |||||         |||||||||||||||||||||||    
T  31107284 ataaattttttttcaaagaaaacacaaaaaactatac 31107320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 370
Target Start/End: Original strand, 4987947 - 4988069
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||| || |||| |||   |||||||||||| ||||||||||||||||||||||         
T  4987947 aaaattaaatgcaaaatgcattcaatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 4988046  T
Q  348 nnaaagaaaacacaaaaaactat 370  Q
      ||||| |||||||||||||||    
T  4988047 tcaaagataacacaaaaaactat 4988069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 370
Target Start/End: Original strand, 16524384 - 16524505
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||||         
T  16524384 aaaattaaatgcaaagtgcattcaatttgttctct-tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 16524482  T
Q  348 nnaaagaaaacacaaaaaactat 370  Q
      ||||| |||||||||||||||    
T  16524483 tcaaagataacacaaaaaactat 16524505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 16013583 - 16013493
Alignment:
Q  252 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||||    
T  16013583 ttaaatgaaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 16013493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 3888431 - 3888525
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | ||||||||||  ||| | ||||||||| || |||| |||   || ||||||||||||| ||||||||||||||||||    
T  3888431 aaaattaaatgcaaagtgcattcaatttgttctctttttcattttctctataatcaactacccatgaaaattgtttctacatcttcctataaaac 3888525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 9428857 - 9428907
Alignment:
Q  354 aaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  9428857 aaaacacaaaaaattatacttcaaattcttatgttttagttttattaataa 9428907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 5300748 - 5300661
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||||||||| |||| | |||||||||| |||||| ||| ||||| || ||||||||||       |||||||||||||||||||||||||||||    
T  5300748 aaaattaaatacaaagtgcattcaatttgctcttttttttattttctcaataaccaatg-------aaaattgtttttacatcttcctataaaac 5300661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 404
Target Start/End: Complemental strand, 14573294 - 14573127
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttct-ctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||| ||||| |||||||||  |||||| ||| |||||| | || |||  |||||| ||||||| |||    ||||||||||| |||||||||| |||     
T  14573294 tttatactcatgaaattaaatttaaattatattaaatttttttctctctaccattttctccataatcaacaaacaatgaaaattatttttacatcatccc 14573195  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||| ||       |||||||| |||||||  |||||||||||||| ||| ||||||||||||||||||    
T  14573194 ataatacttatttcaaagaaaatacaaaaat-tatactccaaattcatatattttagttttcttaataa 14573127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 5822123 - 5822029
Alignment:
Q  314 aaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||||| |||| ||||       ||||| ||||||| ||| |||||| |||| | | || ||||||||||||||||||||||    
T  5822123 aaaattgtttttacatctttctatgaaacttattccaaagataacacaagaaattatactacaaactataatattttagttttcttaataagtgt 5822029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 12278625 - 12278665
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  12278625 ttctttgtctcaaaatataagcaaaaaagatcaacttttat 12278665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 30949051 - 30949094
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||| ||||||||||||||||||||  |||||||||    
T  30949051 attttctttgtctcaaaatataagcaaaaaagactaacttttat 30949094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 32882924 - 32882882
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaactttt 214  Q
    |||||||||||||| |||||||||||||||||||  |||||||    
T  32882924 cattttctttgtcctaaaatataagcaaaaaagaccaactttt 32882882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 1130435 - 1130480
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| ||||||||||||| |  ||||||||||    
T  1130435 cattttctttgtcccaaattataagcaaaaaaaaccaacttttatc 1130480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 5300835 - 5300791
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||    
T  5300835 cattttctttgtcccaaattataagca-aaaagatcaacttttatc 5300791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 10227790 - 10227871
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||| | |||||||||        | ||| ||||||||| ||||||||||||||||||||  |||||||||    
T  10227790 atactccctccgtcctaaaatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 10227871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 17598208 - 17598241
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaaga 205  Q
    |||||| |||||||||||||||||||||||||||    
T  17598208 cattttttttgtcccaaaatataagcaaaaaaga 17598241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 5121503 - 5121451
Alignment:
Q  356 aacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||||||||  |||||  ||| || ||||||||||||||||||||    
T  5121503 aacacaaaaaactatacctcaaatcattaagtgttagttttcttaataagtgt 5121451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 17722047 - 17722007
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  17722047 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 17722007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 30766365 - 30766405
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| |||||||||||||||||| || |||||||||    
T  30766365 ttctttgtctcaaaatataagcaaaaaaaatcaacttttat 30766405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 1e-91; HSPs: 92)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 137 - 404
Target Start/End: Original strand, 7858421 - 7858688
Alignment:
Q  137 actccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnng 236  Q
    |||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        |    
T  7858421 actccctccgtcacataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttg 7858520  T
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  7858521 tttattctcataaaattaaatgcaaattactttcaattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttccta 7858620  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7858621 taaaacttttttcaaataaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 7858688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 170 - 404
Target Start/End: Complemental strand, 7022637 - 7022403
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||          ||||||||||||||||||||||||||||||||    
T  7022637 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacatt 7022538  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||       ||||||||||||||||||||    
T  7022537 caattttctctttctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctataaaacttttttcaaagaaaacacaaaaaacta 7022438  T
Q  370 tactccaaattcttatgttttagttttcttaataa 404  Q
    ||||||||||| |||||||||||||||||||||||    
T  7022437 tactccaaatttttatgttttagttttcttaataa 7022403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 34890342 - 34890170
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34890342 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 34890243  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34890242 ataaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgt 34890170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 171 - 408
Target Start/End: Original strand, 26483460 - 26483696
Alignment:
Q  171 acattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacattc 270  Q
    ||||||||||||| |||||||||||| |||||| | |||||||||| |||| |||||          |||||||| |||||||||||| |||||||||||    
T  26483460 acattttctttgtaccaaaatataag-aaaaaacacaaacttttatttttttcaagatttttttttgttattctcgtaaaattaaatgtaaattacattc 26483558  T
Q  271 aattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactat 370  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||    
T  26483559 aattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctataaaacttttttcaaagaaaacacaaaaaactat 26483658  T
Q  371 actccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  26483659 acttcaaattcttatgttttagttttcttaataagtgt 26483696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 36190764 - 36190936
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  36190764 gtttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcct 36190863  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  36190864 ataaaacttttttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttttcttaacaagtgt 36190936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 35746484 - 35746619
Alignment:
Q  1 acgcagtggagtttgattgcatgcagccgagtttagcggaagaagaaaccgcagtgaagaagtagatgcatttgcaaagggaaagtaagaatattttaat 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35746484 acgcagtggagtt-gattgcatgcagccgagtttagcggaagaagaaaccgcagtgaagaagtagatgcatttgcaaagggaaagtaagaatattttaat 35746582  T
Q  101 aatttagattacaattctacccttttgtcttcacata 137  Q
    |||||||||||||||||||||||||||||||||||||    
T  35746583 aatttagattacaattctacccttttgtcttcacata 35746619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 135 - 404
Target Start/End: Complemental strand, 41086655 - 41086386
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaa-gataaacttttatcttttccaagannnnnn 233  Q
    ||||||||||||||||| |||||||||        |||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||          
T  41086655 atactccctccgtcccacaatataagcaaaaaaa-cacattttctttgtcccaaaatataagcaaaaaaagacaaacttttatctttttcaagatttttt 41086557  T
Q  234 nngtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
      |||||||||||||||||||||||||||||||||| |||||||||| | ||| ||||||||||| |||||| ||||||||||||||||||||||||||     
T  41086556 ttgtttattctcataaaattaaatgcaaattacattgaattttctctctgttttattttttccattaccaatagccaatgaaaattgtttttacatcttt 41086457  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
     ||||||||       |||||||||||||||||||||| | |||||| ||||  |||||||||||||||||    
T  41086456 atataaaacttttttcaaagaaaacacaaaaaactataattcaaatttttattatttagttttcttaataa 41086386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 43216515 - 43216343
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||| |  ||||||||||||||||||||||||||    
T  43216515 gtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcct 43216416  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43216415 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 43216343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 24892830 - 24893005
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttac---atctt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||    ||| |    
T  24892830 gtttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgtttttattatatcct 24892929  T
Q  333 cctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||       ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  24892930 cctataaaacgttttccaaagaaaacacaaaaaactatactctaaattcttatgtttaagttttcttaataagtgt 24893005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 236 - 384
Target Start/End: Original strand, 31734107 - 31734255
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  31734107 gtttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcct 31734206  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattctta 384  Q
    |||||||       |||||||||||||||||||||||||||||||||||    
T  31734207 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 31734255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 135 - 396
Target Start/End: Complemental strand, 15958184 - 15957919
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnn 234  Q
    ||||||||||||||||||||||||||         || ||||||||||||||||||||||||||||||| | ||| |||| ||||||   |||           
T  15958184 atactccctccgtcccataatataagaaaaaaaaacatattttctttgtcccaaaatataagcaaaaaatacaaatttttgtcttttttcagattttttt 15958085  T
Q  235 n--gtttattctcataaaattaaatgcaaattacattcaattttctctttct--ttcattttttccataaccaatggccaatgaaaattgtttttacatc 330  Q
       ||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| || |||||||||||||||||| |     
T  15958084 tttgtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttttactta 15957985  T
Q  331 ttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagtttt 396  Q
    ||||||||||||       ||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  15957984 ttcctataaaacttttttcaaagaaaacacaataaactatactccaatttcttatattttagtttt 15957919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 236 - 409
Target Start/End: Original strand, 28348603 - 28348775
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||| |||||    
T  28348603 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttca-tttttccataaccaatagccaatggaaattgtttttacatattcct 28348701  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgta 409  Q
    |||||||       |||||||| |||||| |||||||||||||||||||||||||  ||||| ||||| |||||    
T  28348702 ataaaactttttccaaagaaaatacaaaatactatactccaaattcttatgtttttattttcgtaatatgtgta 28348775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 34158459 - 34158290
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||  |||||| |||||||||| | |||||||||||||||||||||||||||    
T  34158459 gtttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcct 34158360  T
Q  336 ataaaac-nnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||        ||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||    
T  34158359 ataaaacttttttttaaagaaaacacaacaaactatactccagattcttatgttttaattttcttaataa 34158290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 8711868 - 8712036
Alignment:
Q  236 gtttattctcataaaa-ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  8711868 gtttattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttcc 8711967  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||       ||| |||||||||||||||||||||||||    |||||||||||||| |||||||||||    
T  8711968 tataaaactttttccaaa-aaaacacaaaaaactatactccaaa----tatgttttagtttttttaataagtgt 8712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 252 - 408
Target Start/End: Complemental strand, 30575987 - 30575830
Alignment:
Q  252 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat-aaaacnnnnnnna 350  Q
    ||||||||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||       |    
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcctgtaaaaacttttttta 30575888  T
Q  351 aagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  30575887 aagaaaacacaaaaaactttactccaaatttttatgttttagttttcttaataagtgt 30575830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 237 - 410
Target Start/End: Complemental strand, 8107784 - 8107611
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||||||||||||||||| |  |     
T  8107784 tttattctcataaaattaaatgcaaattacattcaattttctctctctttca-tttatccataaccaatagccaatgaaaattgtttttacatcatattg 8107686  T
Q  337 taaaacnnnnnnnaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
    ||||||       |||||||| || ||||||||||||||||||||||||| ||||| |||| ||||||| |||||    
T  8107685 taaaacttttttcaaagaaaatacaaaaaaactatactccaaattcttatattttaatttttttaataaatgtaa 8107611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 35456192 - 35456016
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||  ||| |||||||||||||||||||||||||| ||    
T  35456192 gtttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttct 35456093  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttt-----tagttttcttaataagtgt 408  Q
    |||||||       ||| |||||| ||||||||||||| |||||||||||||||     |||||||||||||||||||    
T  35456092 ataaaactttttcaaaa-aaaacataaaaaactatacttcaaattcttatgttttacactagttttcttaataagtgt 35456016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 384
Target Start/End: Original strand, 13143756 - 13143904
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||  |||||||||||||||||||||||||||||    
T  13143756 gtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcct 13143855  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattctta 384  Q
    || ||||       || |||||||||||||| |||||| ||||||||||    
T  13143856 atgaaacttttttcaacgaaaacacaaaaaattatacttcaaattctta 13143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 29920434 - 29920264
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||| | ||||||||||||||||| || ||||  ||||| ||||||| |||| |||||||||||||||||||||||||||| ||    
T  29920434 ttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcccat 29920335  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       ||||| ||||||||||| | |||| ||||||||||||||||||||||||||||||||||    
T  29920334 gaaacttattccaaagataacacaaaaaattgtacttcaaattcttatgttttagttttcttaataagtgt 29920264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 4047060 - 4046889
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||| || | ||    
T  4047060 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 4046961  T
Q  338 aaaacnnnnnnnaaagaaaacaca-aaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       |||||||||||| ||||||||| || |||||||||||  |||| ||||||||||||||||    
T  4046960 gaaacttattataaagaaaacacacaaaaactatgctacaaattcttatactttaattttcttaataagtgt 4046889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 8709950 - 8709782
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||  ||||| ||||||||  || | ||||||||| ||||||||| |||||| ||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaattttctct--cttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccat 8709853  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     | ||       ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  8709852 gagacttatttcaaagaaaacacaaaaaactatactccaaattcttatgttttagtttttttattaagtgt 8709782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 276 - 408
Target Start/End: Complemental strand, 13144073 - 13143941
Alignment:
Q  276 tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnn-aaagaaaacacaaaaaactatactc 374  Q
    ||||| |||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||    
T  13144073 tctctctctttcattttt-ccataaccaataactaatgaaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaaactatactc 13143975  T
Q  375 caaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||||||||||||||||||||    
T  13143974 caaattcttatgttttagttttcttaataagtgt 13143941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 236 - 404
Target Start/End: Original strand, 7499718 - 7499875
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt-ccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  7499718 gtttattctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttct 7499817  T
Q  335 tataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |              ||||||||| ||||||  ||||||| |||||| ||||||||||||||||||||||    
T  7499818 t------------tcaaagaaaacgcaaaaagttatactctaaattcctatgttttagttttcttaataa 7499875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 236 - 400
Target Start/End: Complemental strand, 15824799 - 15824641
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||| |||||||||| |||||||||| |||||||||| |||| |||||||| |||||||||| |||      ||||||||||||||||| |     
T  15824799 gtttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagcc------aattgtttttacatctttcc 15824706  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttctta 400  Q
    || ||||       |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15824705 atgaaacttattctaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttctta 15824641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 260 - 396
Target Start/End: Original strand, 35525603 - 35525737
Alignment:
Q  260 aaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaaca 359  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||||||| ||||||       ||||||||||    
T  35525603 aaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaacttttttcaaagaaaaca 35525702  T
Q  360 caaaaaactatactccaaattcttatgttttagtttt 396  Q
    |  |||||||||||| |||||||||||||||||||||    
T  35525703 c--aaaactatactctaaattcttatgttttagtttt 35525737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 3642130 - 3642039
Alignment:
Q  243 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttcct 3642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 396
Target Start/End: Complemental strand, 16879560 - 16879400
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||| || ||||||||| |||| ||||||||||||||||| |||||||||||  |||||| |||| | |||| |||||||||||||||| ||||     
T  16879560 gtttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatattccc 16879461  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagtttt 396  Q
    || |||        ||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  16879460 atgaaatttatttcaaagaaaacacaaaaaattatacttcaaattcttatattttagtttt 16879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 2052830 - 2052932
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||  ||||| ||| || ||||| |||||||||||||||||||||||||||| ||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattttctc--tcttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccat 2052927  T
Q  338 aaaac 342  Q
    |||||    
T  2052928 aaaac 2052932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 408
Target Start/End: Complemental strand, 16358240 - 16358108
Alignment:
Q  275 ttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactc 374  Q
    |||||| ||||||||||||| ||||| |||| | |||||||||||| |||||||||||||||| ||||       |||||||||| |||||||||||||     
T  16358240 ttctctctctttcatttttttcataatcaatagtcaatgaaaattgattttacatcttcctatgaaac-tttttcaaagaaaacaaaaaaaactatactt 16358142  T
Q  375 caaattcttatgttttagttttcttaataagtgt 408  Q
    |||||| |||| ||||| ||||||||||||||||    
T  16358141 caaatttttatattttaattttcttaataagtgt 16358108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 17713227 - 17713387
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||| | |||| |||| ||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||         
T  17713227 aaaattaaatgcaaagtgcattcaatgtgctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaacttatt 17713326  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      || || ||||||| |||||||  | |||| |  |||||||||||||| |||||||||||    
T  17713327 tcaaggataacacaagaaactatgttgcaaaatactatgttttagtttttttaataagtgt 17713387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 248 - 404
Target Start/End: Complemental strand, 41362463 - 41362307
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||| ||||| |||  | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||||         
T  41362463 aaaattaaatgcaaagtgcatttaatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 41362364  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
      ||||| |||||||||||||||  | |||| |  ||||||||||||||||||||||    
T  41362363 tcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataa 41362307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 248 - 409
Target Start/End: Original strand, 8673385 - 8673551
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| |||||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||| ||||||||         
T  8673385 aaaattaaatgcaaagtacattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatt 8673484  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattct-----tatgttttagttttcttaataagtgta 409  Q
      ||| | |||||||||||||||  | |||| | |     |||||||||||||||||||||||||||    
T  8673485 tcaaatataacacaaaaaactatgttacaaactattacagtatgttttagttttcttaataagtgta 8673551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 34890474 - 34890390
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    |||||||||||||||||||||||||||        | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  34890474 atactccctccgtcccataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 34890390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 2628320 - 2628160
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    |||||| |||||||| |  ||||||||| |||| ||||||||||| || |||| ||||  |||||||||||| ||||||||||||||||||||||         
T  2628320 aaaatttaatgcaaagtgaattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 2628221  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      || || ||||||| |||||||  | |||| |  |||||||| |||||||||||||||||    
T  2628220 ttaaggataacacaagaaactatgttgcaaactactatgttttggttttcttaataagtgt 2628160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 26954548 - 26954454
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||| ||| || | ||||||||||| || ||||||||   |||||||||||||||||||||||||||||||||||    
T  26954548 aaaattaaatgcaaagtgcattcattttgctttctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaac 26954454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 341
Target Start/End: Complemental strand, 25195202 - 25195109
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaa 341  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||||||||||||||||||||||||    
T  25195202 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa 25195109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 404
Target Start/End: Original strand, 38072169 - 38072323
Alignment:
Q  250 aattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnn 349  Q
    |||||||| |||| | |||||||||| |||||| ||||||||| || |||| |||   |||||||||||||||||||||| ||  ||||||||           
T  38072169 aattaaatacaaagtgcattcaatttgctctttttttcattttctctataatcaactaccaatgaaaattgtttttacatttttttataaaacttaattc 38072268  T
Q  350 aaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||| |||||||||||||||  | |||| |  ||||||||||||||||||||||    
T  38072269 aaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataa 38072323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 17336746 - 17336906
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| ||||   ||||||||  || |||| |||   ||||||||||||||||||||||||||||||||||          
T  17336746 aaaattaaatgcaaagtgcattcaatttgctctccttttcatttactctataatcaactaccaatgaaaattgtttttacatcttcctataaaatttatt 17336845  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      |||||  ||||||||||||||  | |||| |  ||| ||||||||||||||||||||||    
T  17336846 tcaaagatgacacaaaaaactatgttacaaactactatattttagttttcttaataagtgt 17336906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 248 - 410
Target Start/End: Original strand, 8745587 - 8745749
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| ||  || ||||| ||||  |||| |||||||| |||| |||   |||||||||||||||||||||||||||||||||||         
T  8745587 aaaattaaatgcaaactatttttaatttgctctcccttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 8745686  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
      ||  | ||||||| |||||||  | |||| |  |||||||||||||||||||||| |||||    
T  8745687 tcaagaataacacaagaaactatgttgcaaactactatgttttagttttcttaataaatgtaa 8745749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 13143661 - 13143706
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13143661 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 13143706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 41755918 - 41756022
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||| |||| |||||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||   ||||||| ||| ||||||||| || ||    
T  41755918 gtttattatcatgaaattaaatgtaaattacattcaattttttctctctttca-tttttccataagcaataatcaatgaacattatttttacatttttct 41756016  T
Q  336 ataaaa 341  Q
    ||||||    
T  41756017 ataaaa 41756022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 240 - 408
Target Start/End: Complemental strand, 44663953 - 44663788
Alignment:
Q  240 attctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataa 339  Q
    |||||| | |||||||| |||||| | |||||| ||| ||  | ||||||||| ||| ||| |||| |||||| |||||| |||||||||||| | ||||    
T  44663953 attctcgtgaaattaaacgcaaatcatattcaactttatccgtttttcattttgtccctaatcaatagccaataaaaattatttttacatctttccataa 44663854  T
Q  340 aacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||        ||||||||||||||   |||||||| ||||||||||  |||||||||||||||||||||    
T  44663853 aatttattccaaagaaaacacaaa---ctatactctaaattcttataatttagttttcttaataagtgt 44663788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 2052969 - 2053027
Alignment:
Q  350 aaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||| |||||| | |||| |||||||||||||||||||||||||||    
T  2052969 aaagaaaacacaaaaaattatacttctaattattatgttttagttttcttaataagtgt 2053027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 342
Target Start/End: Complemental strand, 33563681 - 33563573
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttcttt--cattttttccataaccaa--tggccaatgaaaattgtttttacatcttc 333  Q
    |||||||||| |||||||| | |||||||||||||| | |||| ||||   |||||| | |||||||||  ||| |||||||||||||||||||||||||    
T  33563681 ttattctcatgaaattaaacgtaaattacattcaatctcctctctcttctccattttctgcataaccaaaatggtcaatgaaaattgtttttacatcttc 33563582  T
Q  334 ctataaaac 342  Q
    | |||||||    
T  33563581 ccataaaac 33563573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 4047157 - 4047113
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  4047157 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 4047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 358 - 406
Target Start/End: Original strand, 11158675 - 11158723
Alignment:
Q  358 cacaaaaaactatactccaaattcttatgttttagttttcttaataagt 406  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  11158675 cacaaaaaattatattccaaattcttatgttttagttttcttaataagt 11158723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 13144129 - 13144085
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctct 280  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  13144129 gtttattttcataaaattaaatgcaaattacattcaattttctct 13144085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 24892700 - 24892780
Alignment:
Q  137 actccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||||||         | |||||||||||| ||||||||||||||||||||| |||||||||||    
T  24892700 actccctccgtcccataatataaggaaaaaaaactcattttctttgttccaaaatataagcaaaaaagacaaacttttatc 24892780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 45190700 - 45190748
Alignment:
Q  360 caaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  45190700 caaaaaactatgctccaaattcttatgttttagttttcttaacaagtgt 45190748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 4039037 - 4038943
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||| || |||| |||   | |||||||||||||||||||||||| ||||||||    
T  4039037 aaaattaaatgtaaagtgcattcaatttgctctctttttcattttctctataatcaactacaaatgaaaattgtttttacatcttcatataaaac 4038943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 13144224 - 13144179
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||    
T  13144224 cattttctttgtctcaaaatataagcaaaaaagacaaacttttatc 13144179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 35525495 - 35525540
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||    
T  35525495 cattttctttgtcccaaaatataagtaaaaaagacaaacttttatc 35525540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 36190668 - 36190713
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||||||||| | |||||||||    
T  36190668 cattttctttgtcccaaaatataagcaaaaaagacacacttttatc 36190713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 14576301 - 14576214
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || ||||       |||||||||||| |||||||||||| |||||||||    
T  14576301 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataa-------ccaatgaaaattatttttacatctttctataaaac 14576214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 30576089 - 30576045
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||    
T  30576089 attttctttgtcccaaaatataagcaaaaaagacaaatttttatc 30576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 36537976 - 36538020
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  36537976 cattttctttgtctcaaaatataagcaaaaaagacaaacttttat 36538020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 408
Target Start/End: Original strand, 5217397 - 5217555
Alignment:
Q  249 aaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnn 348  Q
    ||||||||||||| || |||||| | | || | ||||||||||| || ||||| |||  ||||| ||||||||||||||||||| |||| ||||          
T  5217397 aaattaaatgcaatttgcattcattatgctttctctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttattt 5217496  T
Q  349 naaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     || || ||||||| ||||||  || ||| | | |||||| |||||||||||||||||||    
T  5217497 caaggataacacaagaaactacgctgcaactac-tatgttatagttttcttaataagtgt 5217555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 6401732 - 6401786
Alignment:
Q  356 aacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtaa 410  Q
    |||||||||||||||||| ||||||  ||| |||||| |||||||||||||||||    
T  6401732 aacacaaaaaactatactacaaattactatattttagatttcttaataagtgtaa 6401786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 27819663 - 27819757
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| |||||| ||||| ||||  |||| ||||| || |||||||||   |||| |||| ||||||||||||||  ||||||||    
T  27819663 aaaattaaatgcaaactacatttaatttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatctttatataaaac 27819757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 33563770 - 33563728
Alignment:
Q  175 tttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  33563770 tttctttgtcccaaattataagcaaaaatgataaacttttatc 33563728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 380
Target Start/End: Original strand, 4480841 - 4480911
Alignment:
Q  310 aatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaatt 380  Q
    |||||||||| |||||||||||||| |||||||       ||||| |||||||||| ||||||||||||||    
T  4480841 aatgaaaattatttttacatcttccaataaaacttattttaaagataacacaaaaacctatactccaaatt 4480911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 8673298 - 8673343
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||    
T  8673298 cattttctttgtcccaaattataagcaaaaaagaccaacttttatc 8673343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 17314746 - 17314791
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||    
T  17314746 cattttctttgttccaaattataagcaaaaaagatcaacttttatc 17314791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 20051504 - 20051560
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaaga 227  Q
    |||||||||||||| |||||||||||| ||||| || ||| |||||||||||||||||    
T  20051504 cacattttctttgtaccaaaatataag-aaaaacgacaaatttttatcttttccaaga 20051560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 29920534 - 29920489
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||    
T  29920534 cattttctttgtccctaaatataagcaaaaaacacaaacttttatc 29920489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 7670749 - 7670813
Alignment:
Q  253 taaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaa 317  Q
    |||||| ||||||||||||||||||||| | || |||||| |||||||| ||| || ||||||||    
T  7670749 taaatgaaaattacattcaattttctctctattccattttctccataactaatagcaaatgaaaa 7670813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 8107882 - 8107834
Alignment:
Q  172 cattttctttgtcccaaaatataagcaa-aaaagataaacttttatctt 219  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||||    
T  8107882 cattttctttgtcccaaaatataagcaaaaaaagacaaatttttatctt 8107834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 11043975 - 11044019
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||    
T  11043975 cattttctttgtctcaaaatataagcaaaaaagaccaacttttat 11044019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 24612723 - 24612679
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||    
T  24612723 cattttctttgtctcaaaatataagcaaaaaagaccaacttttat 24612679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 32678752 - 32678708
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||   ||||||||||||||||||||||||||||||    
T  32678752 cattttctttgttttaaaatataagcaaaaaagataaacttttat 32678708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 33851266 - 33851222
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||    
T  33851266 cattttctttgcctcaaaatataagcaaaaaagatcaacttttat 33851222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 408
Target Start/End: Original strand, 34900037 - 34900089
Alignment:
Q  356 aacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||| ||||   |||||| |||||||||||||||||||||||||||    
T  34900037 aacacaaaaaaatatatcgcaaattattatgttttagttttcttaataagtgt 34900089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 38072114 - 38072158
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||    
T  38072114 attttctttgtcccaaattataagcaaaaaagaccaacttttatc 38072158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 25321828 - 25321785
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||| ||||||||||||||||||||  |||||||||    
T  25321828 attttctttgtctcaaaatataagcaaaaaagaccaacttttat 25321785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 28348511 - 28348553
Alignment:
Q  174 ttttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  28348511 ttttctttgtcccaaaatataag-aaaaaagacaaacttttatc 28348553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 37597949 - 37598032
Alignment:
Q  133 acatactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||| | |||||||||        | ||| ||||||||| ||||||||||||||||||||  |||||||||    
T  37597949 acatactccctccgtcctaaaatataagcaaaacattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 37598032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 41809065 - 41809022
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||| |||||| |||||||||||||||||||| ||||||||||    
T  41809065 attttttttgtctcaaaatataagcaaaaaagacaaacttttat 41809022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 43216618 - 43216587
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaa 203  Q
    ||||||||||||||||||||||||||||||||    
T  43216618 cattttctttgtcccaaaatataagcaaaaaa 43216587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 407
Target Start/End: Complemental strand, 17749616 - 17749562
Alignment:
Q  353 gaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtg 407  Q
    |||||||||| |||||||||| |||||| |||||||| | | |||||||||||||    
T  17749616 gaaaacacaataaactatacttcaaattattatgtttaaatattcttaataagtg 17749562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 34158547 - 34158509
Alignment:
Q  179 tttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  34158547 tttgttccaaaatataagtaaaaaagataaacttttatc 34158509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 40773453 - 40773403
Alignment:
Q  354 aaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||| |||| ||||||||||||| |||| |||||||||| |||||||    
T  40773453 aaaacacacaaaattatactccaaattgttatattttagtttttttaataa 40773403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 41362888 - 41362846
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaactttta 215  Q
    ||||||||||||||||| |||||||||||||||  ||||||||    
T  41362888 attttctttgtcccaaattataagcaaaaaagaccaactttta 41362846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 2238825 - 2238792
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaaga 205  Q
    |||||||||||||| |||||||||||||||||||    
T  2238825 cattttctttgtcctaaaatataagcaaaaaaga 2238792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 5217308 - 5217353
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||| ||||| |||||||||||||||  ||||||||||    
T  5217308 cattttctttgtaccaaattataagcaaaaaagaccaacttttatc 5217353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 17713139 - 17713184
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||| ||||||||  ||||||||||    
T  17713139 cattttctttgtcccaaattataagtaaaaaagaccaacttttatc 17713184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 342
Target Start/End: Complemental strand, 28497253 - 28497200
Alignment:
Q  289 ttttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||| |||||||||    ||||||||||||||||||||||||| |||||||    
T  28497253 ttttttcaataaccaataagtaatgaaaattgtttttacatcttcccataaaac 28497200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 35259938 - 35260019
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||| | |||||||||        | ||| ||||||||| ||||||||||||||||||||  |||||||||    
T  35259938 atactccctccgtcctaaaatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 35260019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 3099870 - 3099914
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||  |||||||||||||||||||| || |||||||    
T  3099870 cattttctttgtttcaaaatataagcaaaaaagacaatcttttat 3099914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 14693434 - 14693466
Alignment:
Q  309 caatgaaaattgtttttacatcttcctataaaa 341  Q
    ||||||||||||||||||||||||| |||||||    
T  14693434 caatgaaaattgtttttacatcttcttataaaa 14693466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 27621052 - 27621092
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||| |||||||||||||||| ||||||||||    
T  27621052 ttctttgtctcaatatataagcaaaaaagacaaacttttat 27621092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 27752504 - 27752548
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| |||||||||| |||||||||  |||||||||    
T  27752504 cattttctttgtctcaaaatataaacaaaaaagaccaacttttat 27752548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 200
Target Start/End: Original strand, 41426207 - 41426235
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaa 200  Q
    |||||||||||||||||||||||||||||    
T  41426207 cattttctttgtcccaaaatataagcaaa 41426235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 170; Significance: 5e-91; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 170 - 408
Target Start/End: Original strand, 77885 - 78123
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||        ||||||||||||||||||||||| ||||||||||    
T  77885 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgtaaattacatt 77984  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||||||||||||||||||    
T  77985 caattttcactttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaaacta 78084  T
Q  370 tactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  78085 tactctaaattcttatgttttagttttcttaataagtgt 78123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 136 - 408
Target Start/End: Complemental strand, 840 - 568
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||| ||||||||||||||||        |||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||            
T  840 tactccctcagtcccataatataagcaaaaaaaacacattttctttgtaccaaaatataagcaaaaaacacaaacttttatcttttccaagatttttttt 741  T
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
      ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  740 tgttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccct 641  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  640 ataaaacttttttcaaagaaaacacataaaactatactccaaattcttatgttttagttttcttaataagtgt 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 3e-80; HSPs: 112)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 136 - 408
Target Start/End: Original strand, 36546440 - 36546712
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||            
T  36546440 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattcttttt 36546539  T
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  36546540 gtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcct 36546639  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    || ||||       |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  36546640 atgaaactttttccaaagaaaatacaaaaaactatactctaaatttttatgttttagttttcttaataagtgt 36546712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 136 - 408
Target Start/End: Complemental strand, 36561875 - 36561603
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||            
T  36561875 tactccctccgtcccataatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattcttttt 36561776  T
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  36561775 gtttattctcataaaattaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcct 36561676  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    || ||||       |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  36561675 atgaaactttttccaaagaaaatacaaaaaactatactctaaatttttatgttttagttttcttaataagtgt 36561603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 172 - 408
Target Start/End: Complemental strand, 37042607 - 37042371
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacattca 271  Q
    ||||||||||||||||||||||||| |||||||| ||| ||| |||||||||||||          ||||||||||||||||||||||||||||||||||    
T  37042607 cattttctttgtcccaaaatataaggaaaaaagacaaattttaatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacattca 37042508  T
Q  272 attttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactata 371  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||    
T  37042507 attttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactttttccaacgaaaacacaaaaaactata 37042408  T
Q  372 ctccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||| |||||||||||||||||||||||||||    
T  37042407 ctccaaatttttatgttttagttttcttaataagtgt 37042371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 136 - 406
Target Start/End: Complemental strand, 11054533 - 11054267
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||            
T  11054533 tactccctccgtcccataatataagccaaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttt 11054435  T
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
      ||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  11054434 tgttattctcataaaattaaatgcaaattacattcaattttctctttc----attttttccataaccaatagccaatgaaaattgtttttaaatcttcct 11054339  T
Q  336 ataaaac-nnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 406  Q
    |||||||        |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11054338 ataaaacttttttccaaagaaaacacaaaaaactatactccaaattcttatattttagttttcttaataagt 11054267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 170 - 404
Target Start/End: Complemental strand, 23311785 - 23311551
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||          ||||||||||||||||||||| | ||||||||    
T  23311785 cacattttctttgtcccaaaatataagcaaaaaagtcaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgtatattacatt 23311686  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||| |||||||    
T  23311685 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaacta 23311586  T
Q  370 tactccaaattcttatgttttagttttcttaataa 404  Q
    ||||| ||||| |||||||||||||||||||||||    
T  23311585 tactctaaatttttatgttttagttttcttaataa 23311551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 136 - 408
Target Start/End: Original strand, 30189468 - 30189741
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    |||||||||| |||||||||||||||        |||||||||||||||||||||||| |  |||||||||||| |||||||||||| ||||            
T  30189468 tactccctccatcccataatataagcaaaaaaa-cacattttctttgtcccaaaatattaataaaaaagataaatttttatcttttctaagatttttttt 30189566  T
Q  236 gt-ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt-ccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
     | |||||||| |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  30189567 ttgttattctcgtaaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttc 30189666  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  30189667 ctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttaatttttttaataagtgt 30189741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 173 - 404
Target Start/End: Original strand, 47864125 - 47864357
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn-gtttattctcataaaattaaatgcaaattacattca 271  Q
    |||||||||||||||||||||||  |||||||| |||||| |||||||| |||||         ||||||||||||||||||||||||||||||||||||    
T  47864125 attttctttgtcccaaaatataaataaaaaagacaaacttctatctttttcaagatttttttttgtttattctcataaaattaaatgcaaattacattca 47864224  T
Q  272 attttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactata 371  Q
    ||||| ||| ||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||       ||||||||  ||||||||||||    
T  47864225 attttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatgcaaaaaactata 47864324  T
Q  372 ctccaaattcttatgttttagttttcttaataa 404  Q
    ||||||||||| |||||||||||||||||||||    
T  47864325 ctccaaattctcatgttttagttttcttaataa 47864357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 237 - 408
Target Start/End: Complemental strand, 14752333 - 14752162
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  14752333 tttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttccta 14752234  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||         ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  14752233 taaatttttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttctaaataagtgt 14752162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 238 - 408
Target Start/End: Complemental strand, 50651161 - 50650991
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||    
T  50651161 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 50651062  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||       |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  50651061 aaaactttttgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttttcttaataagtgt 50650991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 6075079 - 6075251
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  6075079 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcct 6075178  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||| ||       ||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  6075179 gtaacactttttccaaagaaaacacaaaaaattatactccaaattcttatactttagttttcttaataagtgt 6075251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 236 - 404
Target Start/End: Original strand, 28875404 - 28875572
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |    
T  28875404 gtttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttctt 28875503  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||       |||||||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  28875504 ataaaactttttccaaagaaaacacaaataactatagtccaaattcttatgctttagttttcttaataa 28875572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 35963150 - 35963322
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||||  ||||| |||||||||||| |||||||||    
T  35963150 gtttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcct 35963249  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35963250 ataaaactttttccaaacaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 35963322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 7866609 - 7866437
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||| | ||||||||||||||||||||||||| |    
T  7866609 gtttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttctt 7866510  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  7866509 ataaaacttttttcaaagaaaataaaaaaaactatactctaaattcttatgttttagttttcttaataagtgt 7866437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 46711783 - 46711612
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  46711783 gtttattttcataaaattaaatacaaattacattcaaatttctctctctttcattttttc-ataaccaatagccaatgaatattgtttttacatcttcct 46711685  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  46711684 ataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttcgttttcttaataagtgt 46711612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 579264 - 579099
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  579264 gtttaatctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcct 579165  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       |||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  579164 ataaaacttttttcaaagaaaacacaaaaaa-------ccaaattcttatgttttagttttcttaataagtgt 579099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 37074956 - 37075128
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttcttt--cattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||||  ||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  37074956 gtttattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttc 37075055  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 406  Q
    |||||||||       ||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  37075056 ctataaaactttttccaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttttttaataagt 37075128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 236 - 384
Target Start/End: Original strand, 6438081 - 6438229
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  6438081 gtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcct 6438180  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattctta 384  Q
    ||||| |       |||||||||||||||||||||||||||||||||||    
T  6438181 ataaagcttttttcaaagaaaacacaaaaaactatactccaaattctta 6438229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 54465021 - 54464854
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||    
T  54465021 gtttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcct 54464922  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    || ||         ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  54464921 at-aatttttttttaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 54464854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 170 - 408
Target Start/End: Complemental strand, 23910687 - 23910467
Alignment:
Q  170 cacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacatt 269  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||        ||||||||||||| ||||||||||||||||||||    
T  23910687 cacattttttttgtcccaaaatataagcaaaaaagacaaatttttatctttttcaagattttttttgtttattctcatataattaaatgcaaattacatt 23910588  T
Q  270 caattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaacta 369  Q
    ||||||||                  |||||||||| ||||||||||||| ||||||||||||||||||||||       |||||||||||||||| |||    
T  23910587 caattttc------------------cataaccaatagccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaagcta 23910506  T
Q  370 tactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  23910505 tactctaaattcttatgttttaattttcttaataagtgt 23910467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 53270231 - 53270404
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttct--ctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttc 333  Q
    |||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||||| | ||||||||||| ||||| ||||||     
T  53270231 gtttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattttttcatcttt 53270330  T
Q  334 ctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||| ||||       ||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  53270331 ctatgaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatg-tttaattttcttaatgagtgt 53270404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 29235191 - 29235357
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||| |||| |||||||||| ||||||||||||||      | |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  29235191 gtttattatcattaaattaaatgtaaattacattcaat------tctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcct 29235284  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    || ||||       |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29235285 attaaacgttttctaaagaaaatacaaaaaactatactctaaattcttatgttttagttttcttaataagtgt 29235357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 19464073 - 19464247
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||| | ||||||||||||||||||| ||| ||| |||||||||||| |||||||||||    ||||||||||||||||  ||||||||    
T  19464073 gtttattctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcct 19464172  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaac--tatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  19464173 ataaaacttttttcaaagaaaacacaaaaaactatatactccaaattcttatgttttagttttgttaataagtgt 19464247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 238 - 408
Target Start/End: Original strand, 26208014 - 26208184
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||| |||||| |||| ||  ||| |||||||||||||||||||||||||| | ||    
T  26208014 ttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatcttaccat 26208113  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
     ||||       | | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26208114 gaaacttattccagacaaaacacaaaaaactatactctaaattcttatgttttagttttcttaataagtgt 26208184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 236 - 404
Target Start/End: Original strand, 50730107 - 50730275
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||| | ||||| |  || |||||||||||||||    
T  50730107 gtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcct 50730205  T
Q  336 ataaaacnnnnnnnaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||       ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50730206 ataaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataa 50730275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 50782747 - 50782579
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||| | ||||| |  || |||||||||||||||    
T  50782747 gtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatg-attttttttttacatcttcct 50782649  T
Q  336 ataaaacnnnnnnnaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||       ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50782648 ataaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataa 50782579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 2927289 - 2927456
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||  ||||||| |||||||||| ||||||||||||| |||||||||||||| ||    
T  2927289 ttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccat 2927388  T
Q  338 aaaacnnnnnnnaaagaaaacac-aaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||       |||||||| || |||||||||| || ||||||||||||||||||||||||||||||    
T  2927389 aaaacttattccaaagaaaatacaaaaaaactatgctacaaattcttatgttttagttttcttaataa 2927456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 236 - 408
Target Start/End: Complemental strand, 41476455 - 41476289
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||| ||       ||||||||||||| |||||||||||| ||    
T  41476455 gtttattctcataaaattaaatgcaaattagattcaattttctttccctttcattttttcccta-------gccaatgaaaattatttttacatctttct 41476363  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatg-ttttagttttcttaataagtgt 408  Q
    |||||||       ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  41476362 ataaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatgtttttagttttcttaataagtgt 41476289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 32619956 - 32619787
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| | |  || ||| |||||||||||| ||||||||||||| ||||||||||||| |    
T  32619956 gtttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttctt 32619857  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgtt-ttagttttcttaataa 404  Q
    |||||||       ||||||||||||||| | ||||||||||||||| |||||  |||||||||||||||    
T  32619856 ataaaacctattccaaagaaaacacaaaatattatactccaaattctcatgttcatagttttcttaataa 32619787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 8703107 - 8703275
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||    
T  8703107 gtttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcct 8703204  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||         ||| || |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  8703205 ataaatttttttccaaa-aacacac-aaaaactatactccaaattcttatgttttagtttttttaataagtgt 8703275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 236 - 408
Target Start/End: Original strand, 9054994 - 9055162
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||    
T  9054994 gtttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcct 9055091  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||         ||| || |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  9055092 ataaatttttttccaaa-aacacac-aaaaactatactccaaattcttatgttttagtttttttaataagtgt 9055162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 239 - 396
Target Start/End: Complemental strand, 20847391 - 20847235
Alignment:
Q  239 tattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctata 338  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||||||| ||||  ||||||||||||||||  ||||||||||||     
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatg 20847292  T
Q  339 aaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagtttt 396  Q
    ||||       ||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  20847291 aaacttattccaaagaaaacac-aaaaattatactccaaattcttatgttttaatttt 20847235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 237 - 406
Target Start/End: Complemental strand, 26725116 - 26724947
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    ||||||||||| |||||| |||||||||||||||| |||| ||| ||||  ||||| ||||||| ||||  ||||||||||||||||||||||||||  |    
T  26725116 tttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctca 26725017  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 406  Q
     |||||       ||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  26725016 gaaaacttattccaaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttaataagt 26724947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 34722724 - 34722625
Alignment:
Q  243 ctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||||||||||||||| |||||||||||||||||||||   ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaac 34722625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 297 - 408
Target Start/End: Original strand, 9264610 - 9264721
Alignment:
Q  297 ataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagtttt 396  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  9264610 ataacgaatagccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactatactcaaaattcatatgttttagtttt 9264709  T
Q  397 cttaataagtgt 408  Q
    ||||||||||||    
T  9264710 cttaataagtgt 9264721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 285 - 408
Target Start/End: Original strand, 31836966 - 31837089
Alignment:
Q  285 ttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattctta 384  Q
    |||||||| |||| ||||||| | ||||||||||||||||| ||| ||||||||||||       |||||||| ||||||||||||||||||| ||||||    
T  31836966 ttcattttctccacaaccaatagtcaatgaaaattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaaactatactccaacttctta 31837065  T
Q  385 tgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||||||||||    
T  31837066 tgttttagttttcttaataagtgt 31837089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 8097132 - 8096972
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||| ||||  |||||||||||| ||||||||||||||||||||||         
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 8097033  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      || || ||||||| |||||||  | |||| |  ||||||||||||||||||||||||||    
T  8097032 tcaaggataacacaagaaactatgttgcaaactactatgttttagttttcttaataagtgt 8096972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 407
Target Start/End: Complemental strand, 22479168 - 22479009
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||| ||||||||||||||||||||||||         
T  22479168 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatt 22479069  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtg 407  Q
      ||||| |||||||||||||||  | |||| |  |||||||||||||||||||||||||    
T  22479068 tcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataagtg 22479009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 404
Target Start/End: Original strand, 47115849 - 47116015
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||  ||||| |||| |||||||||||| || |||||| ||||||| ||||  |||| |||||||| ||||||||||| | ||    
T  47115849 ttattctcatgaaattaaatataaatttcatttaattttctcttttttccattttatccataatcaataaccaaagaaaattgcttttacatctttccat 47115948  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    ||||        |||  |||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  47115949 aaaatttattctaaaacaaacacaaaaaattatactctaaattcttatgttttagtttttttaataa 47116015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 3972275 - 3972379
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| |||||| | | |||||||| || ||||||||||||||||||||||||| ||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3972374  T
Q  338 aaaac 342  Q
    |||||    
T  3972375 aaaac 3972379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 342
Target Start/End: Complemental strand, 3997603 - 3997499
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| |||||| | | |||||||| || ||||||||||||||||||||||||| ||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3997504  T
Q  338 aaaac 342  Q
    |||||    
T  3997503 aaaac 3997499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 326
Target Start/End: Complemental strand, 46557325 - 46557237
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgttttta 326  Q
    |||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||| ||||||    
T  46557325 ttattctcatgaaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 238 - 332
Target Start/End: Original strand, 6752670 - 6752764
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
    ||||| |||| ||||||||||||||||||||||| ||| |||| |||| |||||| |||||||||||| |||||| |||||||||||||||||||    
T  6752670 ttattttcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctt 6752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 34194892 - 34194986
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||||||| | |||||| ||| |||| ||||||||||| || |||||||||  |||||||||||||||||||||||||||||||||||    
T  34194892 aaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaac 34194986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 305
Target Start/End: Complemental strand, 33974685 - 33974616
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 305  Q
    |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  33974685 gtttattctcataaaattaaatgcaaattacattaaattttctttctctttcattttttccataaccaat 33974616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 238 - 334
Target Start/End: Complemental strand, 47867036 - 47866941
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || ||| ||||||| |||| |||||||||||| |||||||||| ||||    
T  47867036 ttattctcataaa-ttaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacatattcc 47866941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 10114915 - 10115075
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||||         
T  10114915 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10115014  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| || |||||||| |||  | |||| |  ||||||||||||||||||||||||||    
T  10115015 tcaaagataatacaaaaaattatgttacaaactactatgttttagttttcttaataagtgt 10115075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 14752466 - 14752382
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    |||||||||||||||||||||||||||        | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  14752466 atactccctccgtcccataatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 14752382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 10252015 - 10252175
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||| ||||| | |||||||||| |||| | ||||||||| || |||| |||   |||||||||||||||||||||||||||||||||||         
T  10252015 aaaattaaaagcaaagtgcattcaatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10252114  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| || ||||| || |||  | |||| |  ||||||||||||||||||||||||||    
T  10252115 tcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagtgt 10252175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 16033094 - 16033007
Alignment:
Q  255 aatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||||||| | |||||||||| || | |||||||||||||| ||||| |||  |||||||||||||||||||||||||||||||||||    
T  16033094 aatgcaaagtgcattcaatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaac 16033007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 248 - 400
Target Start/End: Complemental strand, 30454838 - 30454687
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| ||||||||||| || |||||||||  ||||| ||||||||||||||||||| |||||||||         
T  30454838 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatt 30454740  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttctta 400  Q
      || || ||||||| |||||||  | |||| |  ||||||||||||||||||    
T  30454739 tcaaggataacacaagaaactatgttgcaaactactatgttttagttttctta 30454687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 48802714 - 48802548
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagca----aaaaagataaacttttatcttttccaagannn 230  Q
    ||||||||||||||||||||||||| |        | || |||||||||||||||||||||| |    ||||| | ||||||||||||||| |||||       
T  48802714 atactccctccgtcccataatataaacaaaaaaaacgcaatttctttgtcccaaaatataagaagaaaaaaaaaacaaacttttatctttttcaagattt 48802615  T
Q  231 nnnnn---gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttt 294  Q
            |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  48802614 ttttttttgtttattctcataaaagtaaatgcaaattacattcaattttctctctctttcatttttt 48802548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 403
Target Start/End: Complemental strand, 22456122 - 22455967
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||| ||||||||||||| |||||||||||||||         
T  22456122 aaaattaaatgcaaaatgcattcaatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatt 22456023  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaata 403  Q
      ||||  |||||||||||||||  | |||| |  |||||||||||||||||||||    
T  22456022 tcaaagttaacacaaaaaactatgttacaaactactatgttttagttttcttaata 22455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 38401384 - 38401548
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| |||||| |||||||||| | ||||||||| || ||||  ||   |||||||||||| ||||||||||| ||||||||||         
T  38401384 aaaattaaatgcaaagtacatttaattttctctctttttcattttctctataattaactaccaatgaaaattatttttacatctccctataaaacttatt 38401483  T
Q  348 nnaaagaaaacacaaaaaactata----ctccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| ||||||||||||||||     | |||| |  ||||||||||||||||||||||||||    
T  38401484 tcaaagataacacaaaaaactatatatgttacaaactactatgttttagttttcttaataagtgt 38401548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 341
Target Start/End: Complemental strand, 7886731 - 7886638
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaa 341  Q
    ||||| ||||||||| | |||||||||| |||| ||||||||||| || ||||| |||  ||||||||||||||||||||||||| ||||||||    
T  7886731 aaaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaa 7886638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 327
Target Start/End: Original strand, 38674870 - 38674959
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttac 327  Q
    ||||||| || ||||||||| ||||||| |||||||||||||| ||||||||||| | ||||| |||| | |||||||||||||||||||    
T  38674870 ttattcttatgaaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttac 38674959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 10014273 - 10014433
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||| ||||| | |||||||||| |||| | ||| ||||| || |||| |||   |||||||||||||||||||||||||||||||||||         
T  10014273 aaaattaaaagcaaagtgcattcaatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10014372  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| || ||||| || |||  | |||| |  ||||||||||||||||||||||||||    
T  10014373 tcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagtgt 10014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 342
Target Start/End: Complemental strand, 46918327 - 46918233
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||||||| |||||| | ||||| |||| | || ||||||||||| || |||||||||  ||||||||||||||||||| |||||||||||||||    
T  46918327 aaaattaagtgcaaagtgcattccatttgcactctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaac 46918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 21214245 - 21214408
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| | ||| ||||| || |||| |||   ||||||||||||||||||||||||| |||||||||         
T  21214245 aaaattaaatgcaaagtgcattcaatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctataaaacttatt 21214344  T
Q  348 nnaaagaaaacacaaaaaactatactccaaa-ttct--tatgttttagttttcttaataagtgt 408  Q
      ||| | |||||||||||||||  | |||| | ||  ||||||||| ||||||||||||||||    
T  21214345 tcaaaaataacacaaaaaactatgttacaaactactactatgttttaattttcttaataagtgt 21214408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 404
Target Start/End: Complemental strand, 47444087 - 47443932
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| || | | ||||||||| || |||| |||   ||| ||||||||||||||||||||| ||||||||          
T  47444087 aaaattaaatgcaaagtgcattcaatttgctatctttttcattttctctataatcaactaccagtgaaaattgtttttacatctt-ctataaaatttatt 47443989  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
      ||||| |||||||||||||||  | |||| |  ||||||||||||||||||||||    
T  47443988 tcaaagataacacaaaaaactatgttacaaactaatatgttttagttttcttaataa 47443932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 8769587 - 8769533
Alignment:
Q  354 aaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  8769587 aaaacaccaaaaactatactcctaattgttatgttttagttttcttaataagtgt 8769533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 9264006 - 9264076
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatg 306  Q
    |||||||||||||||||||||||||||||||||  |||||| ||| ||||||||||| ||| |||| ||||    
T  9264006 gtttattctcataaaattaaatgcaaattacatctaattttatctctctttcattttctccgtaacgaatg 9264076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 408
Target Start/End: Complemental strand, 33973627 - 33973520
Alignment:
Q  302 caatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaa-ctatactccaaattcttatgttttagttttctta 400  Q
    |||| |||| |||||||| |||| || |||| |||||||||       ||||||||||||||||| |||||||||||||| |||| |||||||||| |||    
T  33973627 caatagccactgaaaattattttgacgtctttctataaaactttttttaaagaaaacacaaaaaaactatactccaaatttttatattttagttttgtta 33973528  T
Q  401 ataagtgt 408  Q
    ||||||||    
T  33973527 ataagtgt 33973520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 3084256 - 3084135
Alignment:
Q  286 tcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttat 385  Q
    ||||||| |||||||| |||  |||||||| |||||||||||||||||| |||||||       || ||  |||||| ||| |||||| |||||||| ||    
T  3084256 tcattttctccataacaaataaccaatgaatattgtttttacatcttcccataaaactaattttaaggaggacacaagaaattatacttcaaattctcat 3084157  T
Q  386 gttttagttttcttaataagtg 407  Q
     ||||||||||||||| |||||    
T  3084156 attttagttttcttaaaaagtg 3084135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 28875309 - 28875356
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  28875309 cattttcattgtcccaaaatataagcaaaaaatataaacttttatctt 28875356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 54465112 - 54465065
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatctt 219  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  54465112 cattttctttgtcctaaaatataagcaaaaaagataaatttttatctt 54465065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 8764687 - 8764633
Alignment:
Q  354 aaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    |||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||    
T  8764687 aaaacacaaaaagctatactcctaattgttatgttttagtttttttaataagtgt 8764633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 25242227 - 25242132
Alignment:
Q  313 gaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||||| |||||| |||||||||       ||||| |||||||||||||||  | |||| |  ||||||||||||||||||||||||||    
T  25242227 gaaaattgttttttcatctttctataaaacttattttaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataagtgt 25242132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 48291826 - 48291920
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||||||||| ||| | |||||||||| |||| | ||||||||||||  ||| |||   |||||||||||| |||||||| |||||||||||||    
T  48291826 aaaattaaatggaaagtgcattcaatttgctctctttttcattttttctgtaatcaactaccaatgaaaattatttttacaccttcctataaaac 48291920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 7866704 - 7866659
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  7866704 cattttctttgtcccaaaatataaacaaaaaagacaaacttttatc 7866659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 21214157 - 21214202
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||    
T  21214157 cattttctttgtcccaaattataagcaaaaaagatcaacttttatc 21214202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 22479256 - 22479211
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||    
T  22479256 cattttctttgtcccaaattataagcaaaaaagacaaacttttatc 22479211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 37074861 - 37074906
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||    
T  37074861 cattttctttgtcccgaaatataagcaaaaaagacaaacttttatc 37074906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 38401296 - 38401341
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||    
T  38401296 cattttctttgtcccaaattataagcaaaaaagatcaacttttatc 38401341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 45347909 - 45347828
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||| | |||||||||        | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  45347909 atactccctccgtcctaaaatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 45347828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 50651258 - 50651213
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||    
T  50651258 cattttctttgttccaatatataagcaaaaaagataaacttttatc 50651213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 45781313 - 45781357
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  45781313 cattttctttgtctcaaaatataagcaaaaaagatcaacttttat 45781357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 335
Target Start/End: Complemental strand, 2994532 - 2994446
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||| | |||||||||| |||| | ||||||||| || |||| |||   ||||||||||||| ||||||||||||||    
T  2994532 aaaattaaatgcaaagtgcattcaatttgctctctttttcattttctctataatcaactaccaatgaaaattg-ttttacatcttcct 2994446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 3972174 - 3972213
Alignment:
Q  177 tctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  3972174 tctttgtcccaaaatgtaagcaaaaaagataaacttttat 3972213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 3997704 - 3997665
Alignment:
Q  177 tctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  3997704 tctttgtcccaaaatgtaagcaaaaaagataaacttttat 3997665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 6074947 - 6075030
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnn-cacattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||         | ||||||| |||||||||||||||||||||||||| |||| ||||||    
T  6074947 atactccctccgtcccataatataagcaaaaaaaaactcattttcattgtcccaaaatataagcaaaaaagacaaacatttatc 6075030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 278
Target Start/End: Original strand, 34722564 - 34722599
Alignment:
Q  243 ctcataaaattaaatgcaaattacattcaattttct 278  Q
    ||||||||||||||||||||||||||||||||||||    
T  34722564 ctcataaaattaaatgcaaattacattcaattttct 34722599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 365 - 408
Target Start/End: Complemental strand, 47866921 - 47866878
Alignment:
Q  365 aactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||||||||||||||||||||||||| || |||||||||||    
T  47866921 aactatactccaaattcttatgttttagtctttttaataagtgt 47866878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 33974780 - 33974738
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaactttt 214  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  33974780 cattttctttgtctcaaaatataagcaaaaaagacaaactttt 33974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 342
Target Start/End: Complemental strand, 54725664 - 54725630
Alignment:
Q  308 ccaatgaaaattgtttttacatcttcctataaaac 342  Q
    |||||||||||||||||||||||||||||||||||    
T  54725664 ccaatgaaaattgtttttacatcttcctataaaac 54725630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 332
Target Start/End: Original strand, 51426621 - 51426706
Alignment:
Q  247 taaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 332  Q
    |||||||||||||||||||||||||||||  ||||  ||| ||||| |||||||    |  |||||||||||| ||||||||||||    
T  51426621 taaaattaaatgcaaattacattcaatttgttcttctttttattttctccataatttttaaccaatgaaaattatttttacatctt 51426706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 54725805 - 54725760
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||    
T  54725805 cattttctttgtcccaaattataagcaaaaaagatctacttttatc 54725760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 2927191 - 2927235
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||||  ||||||||||||||||||| ||||||||||    
T  2927191 cattttctttgtcttaaaatataagcaaaaaagacaaacttttat 2927235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 41936313 - 41936248
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaat 305  Q
    |||||||||| ||| |||||||||||| ||||||||||||||  |||  |||||| ||||||||||||    
T  41936313 ttattctcatgaaactaaatgcaaattgcattcaattttctc--tctcccattttctccataaccaat 41936248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 47444177 - 47444133
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||    
T  47444177 attttctttgtcccaaattataagcaaaaaatatcaacttttatc 47444133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 49067033 - 49067073
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  49067033 ttctttgtctcaaaatataagcaaaaaagatcaacttttat 49067073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 6437982 - 6438013
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaa 203  Q
    ||||||||||||||||||||||||||||||||    
T  6437982 cattttctttgtcccaaaatataagcaaaaaa 6438013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 8769683 - 8769644
Alignment:
Q  240 attctcataaaattaaatgcaaattacattcaattttctc 279  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  8769683 attctcattaaattaaatgcaaattacgttcaattttctc 8769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 16739358 - 16739315
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||| ||||||||||||||||||||  |||||||||    
T  16739358 attttctttgtctcaaaatataagcaaaaaagaccaacttttat 16739315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 20847493 - 20847454
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaact 211  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  20847493 cattttctttgtcccaaattataagtaaaaaagataaact 20847454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 36509583 - 36509540
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctct 280  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||    
T  36509583 tttattctcatcaaattaaatgtaaattacattcgattttctct 36509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 51255105 - 51255148
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||    
T  51255105 attttctttgtctcaaaatataagtaaaaaagatcaacttttat 51255148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 9263916 - 9263954
Alignment:
Q  179 tttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  9263916 tttgtcccaaaatataagcaaaaaaaataaatttttatc 9263954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 43575876 - 43575918
Alignment:
Q  174 ttttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||| |||||| ||||||||||||||||||||| |||||||||    
T  43575876 ttttttttgtctcaaaatataagcaaaaaagatcaacttttat 43575918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 50730016 - 50730054
Alignment:
Q  179 tttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  50730016 tttgtcccaaaatataagtaaaaaagataaatttttatc 50730054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 50782836 - 50782798
Alignment:
Q  179 tttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  50782836 tttgtcccaaaatataagtaaaaaagataaatttttatc 50782798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 2994620 - 2994575
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||| |||||| ||||| || |||||||||||    
T  2994620 cattttctttgtcccaaattataagaaaaaatgacaaacttttatc 2994575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 277
Target Start/End: Complemental strand, 8764783 - 8764746
Alignment:
Q  240 attctcataaaattaaatgcaaattacattcaattttc 277  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  8764783 attctcattaaattaaatgcaaattacgttcaattttc 8764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 22456210 - 22456165
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||| ||||||| |||||||||||||||  ||||||||||    
T  22456210 cattttctttatcccaaattataagcaaaaaagaccaacttttatc 22456165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 32070163 - 32070207
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||    
T  32070163 cattttctttctcccaaattataagc-aaaaagataaacttttatc 32070207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 46711880 - 46711835
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||| ||||||||||||| |||| | |||||||||||    
T  46711880 cattttctttgtctcaaaatataagcataaaaaacaaacttttatc 46711835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 6752571 - 6752615
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    ||||||||||||| ||||| |||| |||||||| |||||||||||    
T  6752571 attttctttgtcctaaaatttaagtaaaaaagacaaacttttatc 6752615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 19463977 - 19464021
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||  |||||||||||||||| |||||| ||||||||||    
T  19463977 cattttcttcatcccaaaatataagcagaaaagacaaacttttat 19464021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 21654164 - 21654204
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  21654164 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 21654204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 34105460 - 34105503
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||    
T  34105460 cattttctttg-cccaaaatataaacaaaaaagatcaacttttat 34105503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 46819965 - 46820009
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||| ||||||||||  ||||||||| |||||||||    
T  46819965 cattttctttgtctcaaaatataaataaaaaagatcaacttttat 46820009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 53270134 - 53270178
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    |||||||||| | ||||||||||||||||||| ||||| ||||||    
T  53270134 cattttctttattccaaaatataagcaaaaaaaataaatttttat 53270178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 54725627 - 54725575
Alignment:
Q  356 aacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||||||| |||| ||| | |||| || ||||||||||||||||||||||||||    
T  54725627 aacacaagaaacaatattacaaactcctatgttttagttttcttaataagtgt 54725575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 176 - 384
Target Start/End: Complemental strand, 3655 - 3447
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacattcaattt 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||| ||||||||||||||||||||||||||    
T  3655 ttctttgtcccaaaatataagcaaaaaagataaacttttatcttttctaagattgttgttgtttattctcatacaattaaatgcaaattacattcaattt 3556  T
Q  276 tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactcc 375  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||       ||||||||||||||||||||||||||    
T  3555 tctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactttttcaaaagaaaacacaaaaaactatactcc 3456  T
Q  376 aaattctta 384  Q
    |||||||||    
T  3455 aaattctta 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 176 - 406
Target Start/End: Original strand, 9979 - 10209
Alignment:
Q  176 ttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnngtttattctcataaaattaaatgcaaattacattcaattt 275  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||| ||||        ||||||||||||| ||||||||||||||||||||||||||    
T  9979 ttctttgtcccaaaatataagtaaaaaaggcaaacttttatcttttctaagattttttttgtttattctcatacaattaaatgcaaattacattcaattt 10078  T
Q  276 tctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaactatactcc 375  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | |||    
T  10079 tctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactttttctaaagaaaacacaaaaaactacattcc 10178  T
Q  376 aaattcttatgttttagttttcttaataagt 406  Q
    |||||||||||||||| ||||||||||||||    
T  10179 aaattcttatgttttaattttcttaataagt 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 136; Significance: 9e-71; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 136 - 404
Target Start/End: Original strand, 154755 - 155022
Alignment:
Q  136 tactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagannnnnnnn 235  Q
    ||||||||||||||||||||||||||        || |||||||||||| ||||||||||| |||||||||||||||||||||||| |||||            
T  154755 tactccctccgtcccataatataagcaaaaaaaacatattttctttgtctcaaaatataagtaaaaaagataaacttttatctttttcaagatttttttt 154854  T
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
     ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| ||    
T  154855 ttttattctcataaaattaaatgcaaattacattaaattttctctatctttcattttttccataaccaatagccaatgtaaattgtttttacatctttct 154954  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||       |||||||| || |||||||||| | || |||||||||||||||||||||||||||    
T  154955 ataaaacttttttcaaagaaaatac-aaaaactatatttcagattcttatgttttagttttcttaataa 155022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 236 - 404
Target Start/End: Complemental strand, 44938 - 44770
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    |||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||||||||||  || |||||    
T  44938 gtttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttttaatattcct 44839  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
    |||||||       ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  44838 ataaaactttttccaaagaaaacacaaaaaaatatactccaaattattatgttttagttttcttaataa 44770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 104; Significance: 1e-51; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 406
Target Start/End: Original strand, 157790 - 157958
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||    
T  157790 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccat 157889  T
Q  338 aaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagt 406  Q
     ||||       ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||    
T  157890 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagt 157958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 52767 - 52676
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacat 329  Q
    ||||| |||| ||||||||||| ||||||||| |||||||||| ||||  ||||| ||||||| |||| | |||||||||||||||||||||    
T  52767 ttattttcatgaaattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacat 52676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 157694 - 157737
Alignment:
Q  173 attttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  157694 attttctttgtcccaaaatataagcaaaaaagacaaacttttat 157737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 53305 - 53269
Alignment:
Q  179 tttgtcccaaaatataagcaaaaaagataaactttta 215  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  53305 tttgtcctaaaatttaagcaaaaaagataaactttta 53269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 92; Significance: 2e-44; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 236 - 396
Target Start/End: Original strand, 1006 - 1166
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||||   ||||||||| |||||||||||||| ||    
T  1006 gtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttct 1105  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagtttt 396  Q
    |||||||       ||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  1106 ataaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagtttt 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 236 - 396
Target Start/End: Original strand, 8966 - 9126
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcct 335  Q
    ||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||||   ||||||||| |||||||||||||| ||    
T  8966 gtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttct 9065  T
Q  336 ataaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttatgttttagtttt 396  Q
    |||||||       ||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  9066 ataaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagtttt 9126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 911 - 956
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  911 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 8871 - 8916
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  8871 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 237 - 385
Target Start/End: Original strand, 40174 - 40321
Alignment:
Q  237 tttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttccta 336  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| || | ||||||||| ||||||||| |||||||||||||||||||||| ||| |||    
T  40174 tttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttcta 40273  T
Q  337 taaaacnnnnnnnaaagaaaacacaaaaaactatactccaaattcttat 385  Q
    |||||        |||||||||||||||| ||||||| |||||||||||    
T  40274 taaaatttattccaaagaaaacacaaaaagctatact-caaattcttat 40321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 334
Target Start/End: Original strand, 160246 - 160342
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcc 334  Q
    ||||||| || |||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| || |||||||||||||    
T  160246 ttattcttatgaaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcc 160342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 408
Target Start/End: Complemental strand, 6030 - 5870
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||||||||||| | |||||||||| |||| | |||||||||||| |||| |||    ||| ||||||||||||||||||||||||||||||         
T  6030 aaaattaaatgcaaagtgcattcaatttactctctttttcattttttctataatcaactatcaaggaaaattgtttttacatcttcctataaaacttatt 5931  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      || || |||||||||||||||| | |||| |  ||||||||| ||||||||||||||||    
T  5930 tcaatgataacacaaaaaactatattacaaactactatgttttaattttcttaataagtgt 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 238 - 404
Target Start/End: Complemental strand, 233652 - 233486
Alignment:
Q  238 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 337  Q
    |||||||||| |||||||||||||||||||||||||| || || |||| |||||| |   ||| | || ||||||||||| |||||||||||||||| ||    
T  233652 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaa-tgtttttacatcttcccat 233554  T
Q  338 aaaacnnnnnnnaaag-aaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 404  Q
     ||||       |||| |||||||||| |||||||    |||||||||| ||||||||||||||||||    
T  233553 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataa 233486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 408
Target Start/End: Original strand, 3174 - 3334
Alignment:
Q  248 aaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnn 347  Q
    ||||||| ||||||| | ||||||||||  | | | ||||||||| || |||| |||   |||||| |||||||||||| |||||||||||||||         
T  3174 aaaattatatgcaaagtgcattcaatttgttttctttttcattttctctataatcaactaccaatggaaattgtttttagatcttcctataaaacttatt 3273  T
Q  348 nnaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 408  Q
      ||||| |||||||||||||||  | |||| |  ||||||||| ||||||||||||||||    
T  3274 tcaaagataacacaaaaaactatgttacaaactactatgttttaattttcttaataagtgt 3334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 3086 - 3131
Alignment:
Q  172 cattttctttgtcccaaaatataagcaaaaaagataaacttttatc 217  Q
    |||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  3086 cattttctttatcctaaattataagcaaaaaagatcaacttttatc 3131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 408
Target Start/End: Complemental strand, 161053 - 160914
Alignment:
Q  269 tcaattttctctttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacnnnnnnnaaagaaaacacaaaaaact 368  Q
    ||||||| |||||||||||||||| || ||||| |||  ||||||||||||||||||||| ||| |||| ||||       || || ||||||| |||||    
T  161053 tcaatttgctctttctttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatttcaaggataacacaagaaact 160954  T
Q  369 atactccaaattcttatgttttagttttcttaataagtgt 408  Q
    ||  | |||| |  ||||||||| ||||||||||||||||    
T  160953 atgttgcaaactactatgttttaattttcttaataagtgt 160914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 858 - 900
Alignment:
Q  236 gtttattctcataaaattaaatgcaaattacattcaattttctc 279  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  858 gtttattctcatgaaattaaatgcaaattacatt-aattttctc 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 893 - 947
Alignment:
Q  288 attttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaac 342  Q
    ||||| |||||||||||| | ||||||||||| |||||| ||||| |||||||||    
T  893 attttctccataaccaatagtcaatgaaaattatttttatatctttctataaaac 947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 4509 - 4590
Alignment:
Q  135 atactccctccgtcccataatataagcnnnnnnnncacattttctttgtcccaaaatataagcaaaaaagataaacttttat 216  Q
    ||||||||||||||| | |||||||||        | ||| ||||||||| ||||||||||||||||||||  |||||||||    
T  4509 atactccctccgtcctaaaatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 4590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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