View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16703_low_57 (Length: 210)
Name: NF16703_low_57
Description: NF16703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16703_low_57 |
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Alignment Details
Target: chr3 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 28776005 - 28775826
Alignment:
| Q |
13 |
acatcatcaccgttctcatcatgctcgtcctaagtctacaaatggtgaaggagtgtctgcgtttttgttaatggttggcataatggttgtcatttatgtt |
112 |
Q |
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| T |
28776005 |
acatcatacccgttctcatcatgctcgtcctaagtctacaaatggtgaaggagggtctgcgtttttgttaatggttggcataatggttgtcatttatgtt |
28775906 |
T |
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| Q |
113 |
gtatgtcgttgtacagaaaacaatgatactccagttactgtactcaagcttcaggtttgttaacaaaaacatctattctt |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28775905 |
gtatgtcgttgtacagaaaacaatgatactccagttactgtactcaagcttcaggtttgttaacaaaaacatctattctt |
28775826 |
T |
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